BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010374
(512 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/463 (78%), Positives = 405/463 (87%), Gaps = 9/463 (1%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR+H QSD NGGSKRRNPGD+ EQ GIG EDTVYRYLCP+RKIGSIIG
Sbjct: 67 MAGQRN-DYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIG 125
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GG+I KQLRSETKSNIRI ET+PGC+ER+VTIYSSSE TN F D+GE VSPAQDALFRV
Sbjct: 126 RGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRV 185
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDRIVA + AD+E E +TVRMLVP+DQIGCVIGKGGQVIQNIR+ETRAQIRILKDE
Sbjct: 186 HDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDE 245
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DELLQ+ G+ +VVRKAL Q+ASRLHENPSRSQHLLLSSS N+YQS G +
Sbjct: 246 HLPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGDW-- 303
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
S+ YSARRDE+SA+EFSLRLVCP GNIGGVIGKGGGIIKQIRQESGASIKVDSS
Sbjct: 304 -----SHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSS 358
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGC 360
AEGDDCIIFIS KEFFEDPSPTI AALRLQPRCSEK ERES D V+TTR+LVPS++IGC
Sbjct: 359 SAEGDDCIIFISAKEFFEDPSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGC 418
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+GGAIISEMRS TRA+IRIL+ EN+PKVA ED+EMVQITG L+VAS+AL QVTLRL+
Sbjct: 419 LIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLK 478
Query: 421 ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRG 463
AN FEREGA+AA PP LPY+PMS D++DGSKYG+RD+Q R RG
Sbjct: 479 ANLFEREGAIAAIPPTLPYLPMS-DMSDGSKYGSRDSQPRERG 520
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/463 (78%), Positives = 405/463 (87%), Gaps = 9/463 (1%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR+H QSD NGGSKRRNPGD+ EQ GIG EDTVYRYLCP+RKIGSIIG
Sbjct: 1 MAGQRN-DYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GG+I KQLRSETKSNIRI ET+PGC+ER+VTIYSSSE TN F D+GE VSPAQDALFRV
Sbjct: 60 RGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRV 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDRIVA + AD+E E +TVRMLVP+DQIGCVIGKGGQVIQNIR+ETRAQIRILKDE
Sbjct: 120 HDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDE 179
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DELLQ+ G+ +VVRKAL Q+ASRLHENPSRSQHLLLSSS N+YQS G +
Sbjct: 180 HLPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGDW-- 237
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
S+ YSARRDE+SA+EFSLRLVCP GNIGGVIGKGGGIIKQIRQESGASIKVDSS
Sbjct: 238 -----SHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSS 292
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGC 360
AEGDDCIIFIS KEFFEDPSPTI AALRLQPRCSEK ERES D V+TTR+LVPS++IGC
Sbjct: 293 SAEGDDCIIFISAKEFFEDPSPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGC 352
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+GGAIISEMRS TRA+IRIL+ EN+PKVA ED+EMVQITG L+VAS+AL QVTLRL+
Sbjct: 353 LIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVASNALLQVTLRLK 412
Query: 421 ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRG 463
AN FEREGA+AA PP LPY+PMS D++DGSKYG+RD+Q R RG
Sbjct: 413 ANLFEREGAIAAIPPTLPYLPMS-DMSDGSKYGSRDSQPRERG 454
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/497 (74%), Positives = 413/497 (83%), Gaps = 36/497 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR+H QSD NGGSKRRNPGD+ EQ GIG EDTVYRYLCP+RKIGSIIG
Sbjct: 1 MAGQRN-DYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GG+I KQLRSETKSNIRI ET+PGC+ER+VTIYSSSE TN F D+GE VSPAQDALFRV
Sbjct: 60 RGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRV 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDRIVA + AD+E E +TVRMLVP+DQIGCVIGKGGQVIQNIR+ETRAQIRILKDE
Sbjct: 120 HDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDE 179
Query: 181 HLPLCALSFDELLQ------------VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSS 228
HLP CALS DELLQ + G+ +VVRKAL Q+ASRLHENPSRSQHLLLSSS
Sbjct: 180 HLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSS 239
Query: 229 SNIYQSSGVYLS----------APLVGSYGNY------------SARRDEASAREFSLRL 266
N+YQS G +++ APL+GSYG Y SARRDE+SA+EFSLRL
Sbjct: 240 PNMYQSGGTFMTPNIDAPLVGVAPLMGSYGGYKGDTGDWSHSYYSARRDESSAKEFSLRL 299
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITA 326
VCP GNIGGVIGKGGGIIKQIRQESGASIKVDSS AEGDDCIIFIS KEFFEDPSPTI A
Sbjct: 300 VCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDA 359
Query: 327 ALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE 386
ALRLQPRCSEK ERES D V+TTR+LVPS++IGCLIG+GGAIISEMRS TRA+IRIL+ E
Sbjct: 360 ALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKE 419
Query: 387 NVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDI 446
N+PKVA ED+EMVQITG L+VAS+AL QVTLRL+AN FEREGA+AA PP LPY+PMS D+
Sbjct: 420 NLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTLPYLPMS-DM 478
Query: 447 TDGSKYGNRDNQSRGRG 463
+DGSKYG+RD+Q R RG
Sbjct: 479 SDGSKYGSRDSQPRERG 495
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/559 (66%), Positives = 434/559 (77%), Gaps = 53/559 (9%)
Query: 1 MAGQSNINYGKRT-HFQSDAATNGGSKRRNPGDE-TEQRGIGSEDTVYRYLCPLRKIGSI 58
MAGQ N +YGKR+ H QSD GG KRRNPGD+ ++Q I +EDTVYRYLCPLRKIGSI
Sbjct: 1 MAGQRN-DYGKRSQHSQSDY---GGGKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSI 56
Query: 59 IGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALF 118
IGKGGEI KQLR+++KSNIRISE +PG DERIVTIYSSSE TNLF ++GE+V PAQDALF
Sbjct: 57 IGKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGETGEYVCPAQDALF 116
Query: 119 RVHDRIVAED--------SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
VHDR++AED +D FGE+ +TVRMLVPADQIGCVIGKGGQVIQNIR+ET
Sbjct: 117 MVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSET 176
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
AQIRI KD+HLP ALS DELL + GEP+ VRKAL Q+A+RLHENPSRSQHL+LSSS+N
Sbjct: 177 CAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENPSRSQHLILSSSAN 236
Query: 231 IYQSSGVYLSA----PLVGSYGNYSA---------RRDEASAREFSLRLVCPAGNIGGVI 277
++ GV+++A P++G YGNY +RDE+S +EFSLRLVCP NIGGVI
Sbjct: 237 VH--GGVFVTANAGAPVLGLYGNYKGGWSSSFYPDQRDESSTKEFSLRLVCPTANIGGVI 294
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
GKGGGIIKQIRQES ASIKVDSSGAEGDDCIIFIS KEFFED SPT+ AALRLQPRCS+K
Sbjct: 295 GKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQSPTMNAALRLQPRCSDK 354
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
TE+ESGD VITTR+LV +QIGCL+G+GGAIISEMR+ TRA+IRI++ +N+PKVA ED+E
Sbjct: 355 TEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNLPKVAVEDDE 414
Query: 398 M----------VQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDIT 447
M VQITGSL+VAS+AL QV LRL+AN F R+GAL A PP LPY+PMSLD +
Sbjct: 415 MVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPALPYIPMSLDTS 474
Query: 448 DGSKYGNRDNQSRGRGNSYATGNLPGR-----DSYGSYGGSLSGGGNAYGAY-------- 494
DGSKYG+RD+QSRGRG + ++ R DSYGS GGSL GG ++YGAY
Sbjct: 475 DGSKYGSRDSQSRGRGYTSSSSGYGSRDVHPSDSYGSNGGSLIGGESSYGAYGGFSSGRS 534
Query: 495 -GDHSSGRGLSGHRKNHGY 512
G SG+ RK+HGY
Sbjct: 535 GGAGLSGQNPVSQRKHHGY 553
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 333/535 (62%), Positives = 407/535 (76%), Gaps = 25/535 (4%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N NYGKR +SD + + GSKRR P DE E IG EDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRN-NYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
GG+I KQLR+ET S IRISET+PGC+ER+VTIYS SE TN+ ED+G+ +SPAQDALFRV
Sbjct: 60 VGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRV 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR++AED D++ + ITVRMLVP+DQIGCVIGKGGQVIQN+R+ET AQIR+L E
Sbjct: 120 HDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSE 179
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CAL+ DELLQ+ GE AVV+KAL Q+A+RLH+NPSRSQH LLSS S I++S +++
Sbjct: 180 HLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPS-IFRSGAGFVN 238
Query: 241 ----------APLVGSYGNYSA--RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
L+G Y +Y + R +S +EF++RLVCP N+G VIGKGGGIIKQ+R
Sbjct: 239 PHAGTQVMGVTSLMGPYASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLR 298
Query: 289 QESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
QESGASIKVDS+ AEGDDCIIF+S KE FED SPTI A +RLQPR SEKTE+ESGD ++T
Sbjct: 299 QESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILT 358
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
TR+LVPS+++GCLIG+GG+II+EMR++TRASIR+L+ EN+PKVA ED+EMVQITG +VA
Sbjct: 359 TRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVA 418
Query: 409 SSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYAT 468
++AL QV +RLRANTFE EG+ A P L YVPMS + DGS+YGNRDN+SR G S +
Sbjct: 419 TNALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDNRSRRHGYSSYS 478
Query: 469 GNLPGRD--SYGSYGGSLSGGGNAYGAYGDHSSGR----GLSGHR-----KNHGY 512
G D SYGGS GGG Y YG +SSGR G+S H K++GY
Sbjct: 479 GGHDYNDLSPSDSYGGSQVGGGGNYAPYGVYSSGRPSSAGVSSHNPSAYGKSYGY 533
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 333/550 (60%), Positives = 403/550 (73%), Gaps = 40/550 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M GQ + YGKR H QSD NG +KRRN GD+ EQ I EDTVYRY+CP RKIGS+IG
Sbjct: 1 MGGQRS-GYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIG 58
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR ETK+ IRI ETVPGC+ER+VTIYS S+ TN E G +VSPAQDALF+V
Sbjct: 59 RGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALFKV 118
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VAED D + +T ++LVP+DQIGCVIGKGG ++QNIR+ET AQIRILKD+
Sbjct: 119 HDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDD 178
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLPLCALS DEL+Q+ G+ +VV+KAL QIASRLH+NPSRSQHLL S+ +Y + G +
Sbjct: 179 HLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIG 238
Query: 241 ----------APLVGSYGN-------------YSARRDEASAREFSLRLVCPAGNIGGVI 277
APLVG+YG YSA RDEAS +EFS+RLVCP GNIGGVI
Sbjct: 239 PGAGAPIVGIAPLVGAYGGYKGDTGDWPPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVI 298
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGG II QIRQESGA+IKVDSS EGD+C+I ISTKEFFE+ SPTI AA+RLQPRCSE
Sbjct: 299 GKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
K ER+SG TTR+LVP+++IGCLIG+GG+II+EMR T+A+IRI++ EN+PK+A ED+
Sbjct: 359 KVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDD 418
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G LD+A AL V RLRAN F+REGAL++ PVLPY+P+S D +DG Y RD
Sbjct: 419 EMVQISGDLDIAKDALVHVLTRLRANLFDREGALSSFLPVLPYLPVSADGSDGLNYDGRD 478
Query: 457 NQSRGRGN-----SYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGR----GLSGH- 506
+ GRG+ + +L D YGSYGGS G +AYGAYG +S GR GLS
Sbjct: 479 GKRHGRGHSYSSGYGGSSDLAAGDIYGSYGGSQLGSNSAYGAYGSYSLGRSSTAGLSSQS 538
Query: 507 ----RKNHGY 512
R+NH Y
Sbjct: 539 GASRRRNHAY 548
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 623 bits (1607), Expect = e-176, Method: Compositional matrix adjust.
Identities = 328/530 (61%), Positives = 395/530 (74%), Gaps = 31/530 (5%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M GQ + YGKR H QSD NG +KRRN GD+ EQ I SEDTVYRY+CP RKIGS+IG
Sbjct: 1 MGGQRS-GYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIG 58
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR ETK+ IRI ETVPGC+ER+VTIY S+ TN E G +VSPAQDALF+V
Sbjct: 59 RGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKV 118
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VAED D + +T ++LVP+DQIGCVIGKGG ++QNIR ET AQIRILKD+
Sbjct: 119 HDRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDD 178
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP+CALS DEL+Q+ G+ AVV+KAL QIASRLH+NPSRSQHLL S+ S +Y + G +
Sbjct: 179 HLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIG 238
Query: 241 ----------APLVGSYGN-------------YSARRDEASAREFSLRLVCPAGNIGGVI 277
APLVGSYG YSA RDEAS++EFS+RLVCP GNIGGVI
Sbjct: 239 PGAGAPIVGIAPLVGSYGGYKGDTGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVI 298
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGG II QIRQ+SGA+IKVDSS EGD+C+I ISTKEFFE+ SPTI AA+RLQPRCSE
Sbjct: 299 GKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
K ER+SG TTR+LVP+ +IGCLIG+GG+II++MR T+A+IRI++ EN+PK+A ED+
Sbjct: 359 KVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDD 418
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G LDVA AL V RLRAN F+REGAL+A PVLPY+P+S D +DG Y RD
Sbjct: 419 EMVQISGDLDVAKDALVHVLTRLRANLFDREGALSAFLPVLPYLPVSADGSDGLNYDGRD 478
Query: 457 NQSRGRGN-----SYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGR 501
+ GRG+ + +L D YGSYGGS G +AYGAYG +S GR
Sbjct: 479 GKRHGRGHSYSSGYGGSSDLAAGDVYGSYGGSQLGSNSAYGAYGSYSLGR 528
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 326/514 (63%), Positives = 395/514 (76%), Gaps = 14/514 (2%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N NYGKR +SD + + GSKRR P DE E IG EDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRN-NYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
GG+I KQLR+ET S IRISET+PGC+ER+VTIYS SE TN+ ED+G+ +SPAQDALFRV
Sbjct: 60 VGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRV 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR++AED D++ + ITVRMLVP+DQIGCVIGKGGQVIQN+R+ET AQIR+L E
Sbjct: 120 HDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSE 179
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS---------NI 231
HLP CAL+ DELLQ+ GE AVV+KAL Q+A+RLH+NPSRSQH LLSS S N
Sbjct: 180 HLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGLVNP 239
Query: 232 YQSSGVYLSAPLVGSYGNYSA--RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ + V L+G Y +Y + R +S +EF++RLVCP N+G VIGKGGGIIKQ+RQ
Sbjct: 240 HAGTQVMGVTSLMGPYASYKSDGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQ 299
Query: 290 ESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITT 349
ESGASIKVDS+ AEGDDCIIF+S KE FED SPTI A +RLQPR SEKTE+ESGD ++TT
Sbjct: 300 ESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILTT 359
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R+LVPS+++GCLIG+GG+II+EMR++TRASIR+L+ EN+PKVA ED+EMVQITG +VA+
Sbjct: 360 RLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAA 419
Query: 410 SALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATG 469
+AL QV +RLRANTFE EG+ A P L YVPMS + DGS+YGNRDN+SR +S +G
Sbjct: 420 NALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDNRSRRHSHSSYSG 479
Query: 470 NLPGRD--SYGSYGGSLSGGGNAYGAYGDHSSGR 501
D SYGGS GGG Y YG +SSGR
Sbjct: 480 GHDYNDLSPSDSYGGSQVGGGGNYAPYGVYSSGR 513
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 304/480 (63%), Positives = 382/480 (79%), Gaps = 12/480 (2%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR H QSD + NGG+KRR+ G++ +Q I SEDTVYRYLCP++KIGS+IG
Sbjct: 1 MAGQRN-SYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR +TKS IRI ETVPG DER++TIYS+S TN E+S ++VSPAQ+ALF++
Sbjct: 60 RGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKI 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VA+D + +D G +T R+LVP+DQIGC+IGKGGQ++QNIRTET AQ+RILKD+
Sbjct: 120 HDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDD 179
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DEL+Q++GEP +V+KAL QIASRLH+NPSRSQHLL S+ +Y S G ++
Sbjct: 180 HLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMA 239
Query: 241 ----------APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQE 290
APLV YG Y A R++ S++EFSLRL+CP NIGGVIGKGG II QIRQE
Sbjct: 240 PTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQE 299
Query: 291 SGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITT 349
+ A+IKVDSS EGDDC+I IS+KEFFED SPT+ AALRLQPRCSEK ER+SG TT
Sbjct: 300 TKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTT 359
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R+LVP+++IGCLIG+GGAII+E+R T+A+IRIL+ EN+PKVA ED+EMVQI+G LDVA
Sbjct: 360 RLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAK 419
Query: 410 SALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATG 469
AL + RLRAN F+REGAL+A PVLPY+P+S D +D Y R+ + GRG+SY++G
Sbjct: 420 EALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSG 479
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 304/480 (63%), Positives = 382/480 (79%), Gaps = 12/480 (2%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR H QSD + NGG+KRR+ G++ +Q I SEDTVYRYLCP++KIGS+IG
Sbjct: 1 MAGQRN-SYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR +TKS IRI ETVPG DER++TIYS+S TN E+S ++VSPAQ+ALF++
Sbjct: 60 RGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKI 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VA+D + +D G +T R+LVP+DQIGC+IGKGGQ++QNIRTET AQ+RILKD+
Sbjct: 120 HDRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDD 179
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DEL+Q++GEP +V+KAL QIASRLH+NPSRSQHLL S+ +Y S G ++
Sbjct: 180 HLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMA 239
Query: 241 ----------APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQE 290
APLV YG Y A R++ S++EFSLRL+CP NIGGVIGKGG II QIRQE
Sbjct: 240 PTHGAPIMGLAPLVSPYGGYKAPREDLSSKEFSLRLICPTENIGGVIGKGGAIINQIRQE 299
Query: 291 SGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITT 349
+ A+IKVDSS EGDDC+I IS+KEFFED SPT+ AALRLQPRCSEK ER+SG TT
Sbjct: 300 TKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTT 359
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R+LVP+++IGCLIG+GGAII+E+R T+A+IRIL+ EN+PKVA ED+EMVQI+G LDVA
Sbjct: 360 RLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAK 419
Query: 410 SALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATG 469
AL + RLRAN F+REGAL+A PVLPY+P+S D +D Y R+ + GRG+SY++G
Sbjct: 420 EALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGRGHSYSSG 479
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust.
Identities = 325/538 (60%), Positives = 400/538 (74%), Gaps = 40/538 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR H QSD GG+KRRN GD+ E+ I S+DTVYRYLCP RKIGSIIG
Sbjct: 1 MAGQRN-SYGKRAHSQSDYDI-GGNKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIG 58
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEI+KQLR +TKS IR+ ETVPGC+ER+VTIYS S+ TN +EDSG ++SPAQDALFRV
Sbjct: 59 RGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISPAQDALFRV 118
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HD+++AED +D+ +T ++LVP+DQIGC+IGKGGQ++QNIR+ET A IRILKDE
Sbjct: 119 HDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDE 178
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DEL+Q++GE AV++KAL QIASRLH+NPSRSQHLL+S+ N+Y S G +
Sbjct: 179 HLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVG 238
Query: 241 ----------APLVGSYGN------------YSARRDEASAREFSLRLVCPAGNIGGVIG 278
APL+G YG YSA RDE +++EFSLR+VCP NIG VIG
Sbjct: 239 PSAAAPIVGIAPLMGPYGGFKGDTGDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIG 298
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
KGG II QIRQESGA+IKVDSS AEGDDC+I IS KE ++ SPTI AA+RLQPRCSEK
Sbjct: 299 KGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIYDHYSPTIEAAVRLQPRCSEKM 358
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
ER+SG TTR+LVPS++IGCL+G+GGAII EMR T+A IRI EN+PKVA +D+EM
Sbjct: 359 ERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEM 418
Query: 399 VQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQ 458
VQI G LDVA AL Q++ RLRAN F+REGA++A PVLPY+P+S + ++G Y +RD +
Sbjct: 419 VQIAGDLDVAKDALIQISRRLRANVFDREGAMSAILPVLPYLPVSAEGSEGLNYDSRDGK 478
Query: 459 SRGR---------GNSYATGNLPGRDSYGSYGGS-LSGGGNAYGAYGDHSSGR-GLSG 505
GR + YA+G D YGSYG S ++ G YGAYG +SSGR G SG
Sbjct: 479 RHGRGSSYAGGYSSSDYASG-----DGYGSYGSSQINASGGPYGAYGSYSSGRTGTSG 531
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/447 (72%), Positives = 375/447 (83%), Gaps = 21/447 (4%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
+Q + +EDTVYRYLCPLRKIGSIIGKGGEI KQLR+++KSNIRISE +PG DER+VTI+
Sbjct: 1 DQHTVTNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIF 60
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED--------SLADDEFGELTLITVRML 146
SSSE TNLFED+GE+V PAQDALF VHDR++AED +D FGE+ +TVRML
Sbjct: 61 SSSEETNLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRML 120
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
VP DQIGCVIGKGGQVIQNIR+ETRAQIRI KDEHLP ALS DELL + GEP+VVRKAL
Sbjct: 121 VPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKAL 180
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS----APLVGSYGNYSA---------R 253
Q+A+RLHENPSRSQHLLLSSS+N YQS G++++ APL+G YGNY +
Sbjct: 181 YQVATRLHENPSRSQHLLLSSSANTYQSGGMFVTANAGAPLLGLYGNYKGSWSSSFYPDQ 240
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
RDEASA++FSLRLVCP NIGGVIGKGGGIIKQIRQES ASIKVDSSGAEG+DCIIFIS
Sbjct: 241 RDEASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGNDCIIFISA 300
Query: 314 KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
KEFFED SPT+ AALR+QPRCSEKTE+ESGD VITTR+LV +QIGCL+G+GGAIISEMR
Sbjct: 301 KEFFEDQSPTMNAALRMQPRCSEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMR 360
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAH 433
+ TRA+IRI++ +N+PKVA ED+EMVQITGSL+VAS+AL QV LRL+AN F R+GAL
Sbjct: 361 NLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLKANIFGRDGALTTF 420
Query: 434 PPVLPYVPMSLDITDGSKYGNRDNQSR 460
PP LPY+P+SLD +DG KYG+RD QSR
Sbjct: 421 PPALPYIPVSLDTSDGPKYGSRDRQSR 447
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 12 RTHFQSDAATNGGSKRRNP-GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLR 70
+ F+ + T + R P E ++ G R L +IG ++GKGG I+ ++R
Sbjct: 301 KEFFEDQSPTMNAALRMQPRCSEKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMR 360
Query: 71 SETKSNIR-ISE----TVPGCDERIVTIYSSSE 98
+ T++NIR ISE V G D+ +V I S E
Sbjct: 361 NLTRANIRIISEDNLPKVAGEDDEMVQITGSLE 393
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 370/563 (65%), Positives = 426/563 (75%), Gaps = 55/563 (9%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNP----GDETEQ------RGIGSEDTVYRYLC 50
MAGQ N +YGKR++ QSD GG KRRNP G++++ I +EDTVYRYLC
Sbjct: 1 MAGQRN-DYGKRSNAQSDY---GGGKRRNPTADDGEDSDHQQQQQQHTITNEDTVYRYLC 56
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
PLRKIGSIIG+GGEI KQLRSE+KSNIRISE + G +ERIVTIYS+SE +NLF DSGEFV
Sbjct: 57 PLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLFGDSGEFV 116
Query: 111 SPAQDALFRVHDRIVA------------EDSLADDEFGELT--LITVRMLVPADQIGCVI 156
PAQDALF VHDRI+A ED ++EFGE ++TVRMLVPADQIGCVI
Sbjct: 117 CPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVI 176
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGGQVIQ+IR+ET AQIRILKDEHLP ALS DELL + GEPAVVRKAL Q+A+RLHEN
Sbjct: 177 GKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVATRLHEN 236
Query: 217 P-SRSQHLLLSSSSNIYQSSGVYLSAP-----LVGSYGN---------YSARRDEASARE 261
P LL SSS+N+YQS G P L+G YG+ YS +RDE S++E
Sbjct: 237 PSRSQHLLLSSSSTNMYQSGGGMFVTPTAGASLMGLYGSYKGGWSSSYYSDQRDEGSSKE 296
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
FSLRLVCP GNIGGVIGKGGGIIKQIRQES ASIKVDSS AEGDDCIIFIS KEFFED S
Sbjct: 297 FSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKEFFEDQS 356
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
T+TAALRLQPRCSEKTER+SGD VITTR+LVP +QIGCL+G+GGAIISEMR+ TRASIR
Sbjct: 357 ATLTAALRLQPRCSEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIR 416
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVP 441
IL +N+PKVA ED+EMVQITGS DVAS+AL V LRL+AN F R+GAL A PP LPY+P
Sbjct: 417 ILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFPPALPYIP 476
Query: 442 MSLDITDGSKYGNRDNQSRGRGNSYATG----NLPGRDSYGSYGGSLSGGGNAYGAYGDH 497
+S+D+ D KYGNRD+QSRGRG S A+G +LP +SYG+ SL+GG + YGAYG
Sbjct: 477 VSMDMLDSPKYGNRDSQSRGRGYSSASGYSSRDLPPSESYGNNASSLNGGESGYGAYGGF 536
Query: 498 SSGRGL--------SGHRKNHGY 512
SSGR S RK+HGY
Sbjct: 537 SSGRSGGSGLSGQNSAQRKHHGY 559
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 327/487 (67%), Positives = 384/487 (78%), Gaps = 26/487 (5%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAGQ N +YGKR H QSD NGG+KRRNPGD+ + I EDTVYRYLCP RKIGSIIG
Sbjct: 1 MAGQRN-SYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIG 59
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR +TKS IRI ETVPGC+ER+VTIYSSS+ TN F+DS FVSPAQDALFRV
Sbjct: 60 RGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRV 119
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+V+E+ +D E + +TVR+LVP+DQIGCVIGKGGQ+IQ+IR+E+ AQ+RILKD+
Sbjct: 120 HDRVVSEEVHGEDS-EEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDD 178
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
HLP CALS DEL+Q++GEP++VRKAL QIASRLH+NPSRSQHLL S+ Y S G +
Sbjct: 179 HLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMG 238
Query: 241 ----------APLVGSYGNY------------SARRDEASAREFSLRLVCPAGNIGGVIG 278
APLVG+YG Y SA RDEAS++EFSLRLVCP GNIGGVIG
Sbjct: 239 PTSGAPIMGLAPLVGTYGGYRGDSGDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIG 298
Query: 279 KGGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
KGG II QIRQESGA+IKVDS S AE DDC+I IS KEFFED SPTI AA+RLQPRCSE
Sbjct: 299 KGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSE 358
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
K ER+SG TTR+LVP+++IGCLIG+GGAII+EMR T+A+IRIL+ EN+PKVA ED+
Sbjct: 359 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDD 418
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI G LDVA AL QVT RLRAN F+REGA++A PVLPY+PM+ D +DG KY RD
Sbjct: 419 EMVQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRD 478
Query: 457 NQSRGRG 463
N+ GRG
Sbjct: 479 NKRHGRG 485
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 578 bits (1489), Expect = e-162, Method: Compositional matrix adjust.
Identities = 310/544 (56%), Positives = 396/544 (72%), Gaps = 36/544 (6%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPG-DETEQRGIGSEDTVYRYLCPLRKIGSII 59
M GQ + +YGKR+H SD+ +KRRNP DE+ I ++DTV+RYLCP+RKIGS+I
Sbjct: 1 MTGQRS-SYGKRSHSHSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVI 59
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GG+IVKQLR++TK+ IRI + +PGCDER+VTI+SSSE TN F+++ + VSPAQDALFR
Sbjct: 60 GRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSPAQDALFR 119
Query: 120 VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
VH R++AED+ D++ E +T ++LVP+DQIGCVIGKGGQ++QNIR+ET AQIRILKD
Sbjct: 120 VHQRVIAEDAREDEDE-ERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSG--- 236
+ LP CALS DEL+Q++GE AVV+KAL QIA+++ +NPSRSQHLL S+ Y + G
Sbjct: 179 DRLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYATGGPGA 238
Query: 237 ---VYLSAPLVGSYGNYS------------ARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
+ AP VG+YG Y A RDEAS REFS+R VCP GNIGGVIGKGG
Sbjct: 239 GAPIMGVAPFVGAYGGYKGDTGDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGG 298
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTER 340
II QIRQ+SGA+IKVDSS EGDDC+I ISTKEFFED SPTI AA+RLQPRCSEK ER
Sbjct: 299 AIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSEKVER 358
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
+SG TTR+LVP+++IGCLIG+GG I++EMR T+A+IRIL+ +N+PK+A ED+EMVQ
Sbjct: 359 DSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIASEDDEMVQ 418
Query: 401 ITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSR 460
I+G LDVA AL Q RLRAN F++E A++ PVLPY+P S+D +DG Y +RD +
Sbjct: 419 ISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPASVDGSDGLNYDSRDGKRH 478
Query: 461 ----GRGNSYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGRGL--------SGHRK 508
G + +L D YGSYG S G++ GAYG++S GR S R+
Sbjct: 479 GRGGYSGGYGGSSDLASGDGYGSYGNSQL--GSSGGAYGNYSLGRTSAYGSSQNGSSRRR 536
Query: 509 NHGY 512
NH Y
Sbjct: 537 NHAY 540
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/545 (57%), Positives = 397/545 (72%), Gaps = 35/545 (6%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPG-DETEQRGIGSEDTVYRYLCPLRKIGSII 59
M GQ I+YGKR+H SD+ +KRRNP D++ I ++DTV+RYLCP+RKIGS+I
Sbjct: 1 MTGQ-RISYGKRSHSHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVI 59
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GG+IVKQLR++TK+ IRI + +PGCDER+VTI+SSSE TN F+++G+ VSPAQDALFR
Sbjct: 60 GRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETGDLVSPAQDALFR 119
Query: 120 VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
VH R++AED+ D E E +T ++LVP+DQIGCVIGKGGQ++QNIR+ET AQIRILKD
Sbjct: 120 VHQRVIAEDARED-EDDERNHVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS------SSNIYQ 233
+ LP CALS DEL+Q++GE AVV+KAL QIA+++ +NPSRSQHLL S+ +
Sbjct: 179 DRLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYAAGGPGA 238
Query: 234 SSGVYLSAPLVGSYGNYS------------ARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
+ + AP VG+YG Y A RDEAS REFS+R VCP GNIGGVIGKGG
Sbjct: 239 GAPIMGVAPFVGAYGGYKGDTGDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGG 298
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTER 340
II QIRQ+SGA+IKVDSS EGDDC+I IS KEFFED SPTI AA+RLQPRCSEK ER
Sbjct: 299 AIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSEKVER 358
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
+SG TTR+LVP+++IGCLIG+GG I++EMR T+A+IRIL+ EN+PK+A ED+EMVQ
Sbjct: 359 DSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASEDDEMVQ 418
Query: 401 ITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSR 460
I+G LDVA AL Q RLRAN F++E A++ PVLPY+P S+D +DG Y +RD +
Sbjct: 419 ISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPASVDGSDGLNYDSRDGKRH 478
Query: 461 GR----GNSYATGNLPGRDSYGSYGGS-LSGGGNAYGAYGDHSSGRGL--------SGHR 507
GR + +L D YGSYG S L GG AYGAYG++S GR S R
Sbjct: 479 GRGGYSSGYGGSSDLASGDGYGSYGNSQLGSGGGAYGAYGNYSLGRTSAYGSSQNGSSRR 538
Query: 508 KNHGY 512
+NH Y
Sbjct: 539 RNHAY 543
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/548 (57%), Positives = 396/548 (72%), Gaps = 43/548 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
MAG N ++GKR QSD NGGSKRRNPGD+T G +DTVYRYLC RKIGSIIG
Sbjct: 1 MAGHRN-SHGKR---QSDFTENGGSKRRNPGDDT--YAPGPDDTVYRYLCASRKIGSIIG 54
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEI KQLR+ET++ IRI E+VPGCDER+VTI+S+S TN + + + V PAQDALFRV
Sbjct: 55 RGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRV 114
Query: 121 HDRIVAEDSLADDEFGELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
H+R+ +++ L +++ E++ +TVR+LVP+DQIGC+IGKGGQ+IQ IR+ET AQIR+L +
Sbjct: 115 HERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSN 174
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSS---G 236
+H+P CA+S DELLQ++G+ VVRKAL Q++SRLH NPS+SQHLL SS + Y S G
Sbjct: 175 DHIPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQHLLASSLTQPYPGSTHLG 234
Query: 237 VYLSAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVIG 278
+AP+VG YG Y RRDE+SA+EFSLRL+C A N+GGVIG
Sbjct: 235 GSSTAPVVGITPVIPPYGGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVIG 294
Query: 279 KGGGIIKQIRQESGASIKVDSSGAE-GDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
KGGGIIKQIRQESGA IKV SS ++ DDCII +S KEFFEDP SPTI AA+RLQPRCSE
Sbjct: 295 KGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
K++ ES + TTR+LV +++IGCLIG+GG+II+E+R +RA++RIL+ ENVPKVA ED+
Sbjct: 355 KSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAEDD 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQITG LDVA +AL Q+ RL+AN FEREG+L+A PPV+PY P+ ++D KY RD
Sbjct: 415 EMVQITGGLDVARNALVQIATRLKANFFEREGSLSAFPPVIPYHPLPAGVSDEPKYLGRD 474
Query: 457 NQSRGR-----GNSYATGNLPGRDSYGSYGGSLSGGG--NAYGAYGDHSSGRGLSGHR-- 507
+ G G + +P DSY SYGGS + G AY Y SS GLSGH
Sbjct: 475 TKPVGHYLYSSGFRTSDDTIPS-DSYASYGGSQAPGRGYGAYSGYSARSSNSGLSGHSSL 533
Query: 508 ---KNHGY 512
K HGY
Sbjct: 534 HYGKRHGY 541
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/554 (55%), Positives = 389/554 (70%), Gaps = 43/554 (7%)
Query: 1 MAGQ-SNINYGKRTHFQSD--AATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGS 57
M GQ NYGKR QSD N + + EQ I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIG+GGEIVKQLR ETK+ IRI ETVPGCDER+VT+YSSS+ TN +D + VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 118 FRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
F++HDR+VAED +D E + ++LVP+DQIGCV+GKGGQ++QN+R+ET AQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 178 KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV 237
KD+H+P CAL DEL+Q++G+ AVV+KAL QIASRLH NPSR+QHLL S+ ++Y S G
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 238 YLS----------APLVGSYGN-------------YSARRDE-ASAREFSLRLVCPAGNI 273
+ APLVG YG YSA RDE +S++EFS+RLVCP GN+
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTGNL 300
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQP 332
GGVIGKGGGII QIRQ+SGA+IKVDSS A+GDDC+I ISTKEFFE+ SPT+ AA+ LQP
Sbjct: 301 GGVIGKGGGIINQIRQDSGATIKVDSS-AKGDDCLITISTKEFFEETFSPTVEAAVLLQP 359
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
RCSEK+ER+SG TTR+LV S++IGCLIG+GG+II+EMR T+++IRIL+ EN+PK+A
Sbjct: 360 RCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIA 419
Query: 393 YEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKY 452
+D+EMVQI+G LDVA AL QV RLRAN F+REGA+ PVLPY+P +D D Y
Sbjct: 420 SDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLNY 479
Query: 453 GNRDNQSRGRGN-----SYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGRGLS--- 504
+RD + GRG+ + +L D+YGSY S GG+ YG Y +S GR +
Sbjct: 480 ESRDGKRHGRGHSYSSGYGGSSDLGPVDTYGSYASSQLAGGSGYGDYESYSLGRNSTVWL 539
Query: 505 ------GHRKNHGY 512
R+NH Y
Sbjct: 540 PSQNNVSRRRNHAY 553
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 285/518 (55%), Positives = 373/518 (72%), Gaps = 25/518 (4%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M+ ++ KR+ QSD NGGSKRR GD+ + I +DTV+RYLCP++KIGS+IG
Sbjct: 1 MSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIG 60
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEIVKQLR +T+S IRI E +PGCDER++TIYS S+ TN F D + +SPAQDALFR+
Sbjct: 61 RGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRI 120
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VA+D+ ++D +T ++LVP+DQIGC++G+GGQ++QNIR+ET AQIRI+KD
Sbjct: 121 HDRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDR 180
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS 240
++PLCAL+ DEL+Q++GE +V+KAL QIASRLHENPSRSQ+LL S+ S Y SG +S
Sbjct: 181 NMPLCALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSAISGGY-PSGSLMS 239
Query: 241 ----------APLVGSYGN---------YSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
APL+GSYG Y R++ A EF +RLV P NI VIGKGG
Sbjct: 240 HAGGPRLVGIAPLMGSYGRDGGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 299
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTER 340
+I Q+RQE+ A+IKVDSS EG+DC+I IS +E FED SPTI A +RLQP+CSEK ER
Sbjct: 300 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVER 359
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
+SG TTR+LVPS++IGC++G+GGAII+EMR T+A+IRIL EN+PKVA +D+EMVQ
Sbjct: 360 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 419
Query: 401 ITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSR 460
I+G LDVA AL Q+T RLRAN F+REGA++A PVLPYVP++ D D Y +RD++
Sbjct: 420 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDSGDRLDYDSRDSRRL 479
Query: 461 GRGNSYATG---NLPGRDSYGSYGGSLSGGGNA-YGAY 494
RGN Y G + + Y SYG + G + YG Y
Sbjct: 480 ERGNPYPGGYGSSGLSAEGYSSYGAPVGGSSSTPYGVY 517
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 283/512 (55%), Positives = 371/512 (72%), Gaps = 28/512 (5%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M+ ++ KR+ QSD NGGSKRR GD+ + I +DTV+RYLCP++KIGS+IG
Sbjct: 7 MSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIG 66
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GG+IVKQLR++T+S IRI E +PGCDER++TIYS S+ TN F D + +SPAQDALFR+
Sbjct: 67 RGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRI 126
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VA+D+ ++D +T ++LVP+DQIGC++G+GGQ++QNIR+ET AQIRI+KD
Sbjct: 127 HDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDR 186
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS-----SSNIYQSS 235
++PLCAL+ DEL+Q++GE +V+KAL+QIASRLHENPSRSQ+LL SS S + +
Sbjct: 187 NMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHAG 246
Query: 236 GVYLS--APLVGSYGN---------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
G L APL+GSYG Y R++ A EF +RLV P NI VIGKGG +I
Sbjct: 247 GPRLVGLAPLMGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALI 306
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESG 343
Q+RQE+ A+IKVDSS EG+DC+I IS +E FED SPTI A +RLQP+CS+K ER+SG
Sbjct: 307 NQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSG 366
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
TTR+LVPS++IGC++G+GGAII+EMR T+A+IRIL EN+PKVA +D+EMVQI+G
Sbjct: 367 LVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISG 426
Query: 404 SLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRG 463
LDVA AL Q+T RLRAN F+REGA++A PVLPYVP++ D D Y +RD++ RG
Sbjct: 427 ELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLERG 486
Query: 464 NSYATGNLPGRDSYGSYGGSLSGGGNAYGAYG 495
N Y G YGS G S G Y YG
Sbjct: 487 NPYPGG-------YGSSGVSAEG----YSPYG 507
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/534 (57%), Positives = 383/534 (71%), Gaps = 34/534 (6%)
Query: 1 MAGQ-SNINYGKRTHFQSD--AATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGS 57
M GQ NYGKR QSD N + + EQ I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIG+GGEIVKQLR ETK+ IRI ETVPGCDER+VT+YSSS+ TN +D + VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 118 FRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
F++HDR+VAED +D E + ++LVP+DQIGCV+GKGGQ++QN+R+ET AQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 178 KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV 237
KD+H+P CAL DEL+Q++G+ AVV+KAL QIASRLH NPSR+QHLL S+ ++Y S G
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 238 YLS----------APLVGSYGN-------------YSARRDE-ASAREFSLRLVCPAGNI 273
+ APLVG YG YSA RDE +S++EFS+RLVCP GN+
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDTGDWPPRSMYSAPRDEISSSKEFSVRLVCPTGNL 300
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQP 332
GGVIGKGGGII QIRQ+SGA+IKVDSS A+GDDC+I ISTKEFFE+ SPT+ AA+ LQP
Sbjct: 301 GGVIGKGGGIINQIRQDSGATIKVDSS-AKGDDCLITISTKEFFEETFSPTVEAAVLLQP 359
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
RCSEK+ER+SG TTR+LV S++IGCLIG+GG+II+EMR T+++IRIL+ EN+PK+A
Sbjct: 360 RCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIA 419
Query: 393 YEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKY 452
+D+EMVQI+G LDVA AL QV RLRAN F+REGA+ PVLPY+P +D D Y
Sbjct: 420 SDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLNY 479
Query: 453 GNRDNQSRGRGN-----SYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGR 501
+RD + GRG+ + +L D+YGSY S GG+ YG Y +S GR
Sbjct: 480 ESRDGKRHGRGHSYSSGYGGSSDLGPVDTYGSYASSQLAGGSGYGDYESYSLGR 533
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust.
Identities = 285/465 (61%), Positives = 357/465 (76%), Gaps = 9/465 (1%)
Query: 9 YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
+GKR++ QS+ NGGSKRRN DET+Q I SEDTVYRYLCP++K GSIIGKGGEI KQ
Sbjct: 9 HGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQ 68
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA-- 126
+RSETKSN+RI+E +PGC+ER+VT+YS++E N F D GE V PA DALF+VHD +VA
Sbjct: 69 IRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADA 128
Query: 127 ---EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
+ + D++ GE +TVRMLVP+DQIGCVIGKGGQVIQN+R +T AQIR++KD HLP
Sbjct: 129 DQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-HLP 187
Query: 184 LCA--LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH-LLLSSSSNIYQSSGVYLS 240
CA LS DELL + GEP VVR+AL Q+AS LH+NPSR QH LL SSSS+++Q + +S
Sbjct: 188 ACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMS 247
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
A L S+ NY+ RRD A AREF + +CPA N+GGVIGKGGG I QIRQE+GA+I+V++S
Sbjct: 248 AALTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTS 307
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGC 360
+ DDCIIFIS+KEF+ED SP + AA+RLQ RCSEK +++ D I+TR+LV S+QIGC
Sbjct: 308 ETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGC 367
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+GGA+ISEMRS TRA+IRIL E+VPK+A EDEEMVQITGS D A AL+QV LRLR
Sbjct: 368 LIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLR 427
Query: 421 ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNS 465
AN+F+ + L P PY+P + + SKY RD+ S+ NS
Sbjct: 428 ANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRDDHSKLNSNS 472
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 285/463 (61%), Positives = 357/463 (77%), Gaps = 7/463 (1%)
Query: 9 YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
+GKR++ QS+ NGGSKRRN D+T+Q IGSE+TVYRYLCP++K GSIIGKGG+I KQ
Sbjct: 9 HGKRSNLQSELTGNGGSKRRNLHDDTDQNVIGSEETVYRYLCPVKKTGSIIGKGGDIAKQ 68
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA-- 126
+RSETKSN+RI+E +PGC+ER+VTIYS++E N F D GE V PA DALF+VHD +VA
Sbjct: 69 IRSETKSNMRINEALPGCEERVVTIYSTNEELNHFGDDGELVCPALDALFKVHDMVVADI 128
Query: 127 --EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
+D DD+ GE +TVRMLVP+DQIGCVIGKGGQVIQN+R +T AQIR++KD HLP
Sbjct: 129 DHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-HLPS 187
Query: 185 CA--LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP 242
CA LS DELLQ+ GEP VVR+AL Q+AS LH NPSR QHLLLSSSS+++Q + +SA
Sbjct: 188 CALTLSHDELLQIIGEPLVVREALYQVASLLHANPSRFQHLLLSSSSSMHQPGAMLMSAA 247
Query: 243 LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
L S+ NY+ RRD A AREF + +CPA N+GGVIGKGGG I QIRQE+GA+I+V++S
Sbjct: 248 LTSSHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSET 307
Query: 303 EGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ DDCII IS+KEF+ED SP + AA+RLQ RCSEK +++ D I+TR+LV S+QIGCLI
Sbjct: 308 DEDDCIIVISSKEFYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLI 367
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
G+GGA+ISEMRS TRA+IRIL E+VPK+A EDEEMVQITG+ D A AL+QV LRLRAN
Sbjct: 368 GKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRLRAN 427
Query: 423 TFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNS 465
+F+ + L P PY+P + + SKY RD+ + NS
Sbjct: 428 SFDMDHGLVLLPTSFPYIPQVTENSSKSKYAKRDDHRKLNSNS 470
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 298/512 (58%), Positives = 376/512 (73%), Gaps = 35/512 (6%)
Query: 1 MAGQSNIN-YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
M G + N +GKR SD A NGG KRRNPGD+T G +DTVYRYLCP RKIGSII
Sbjct: 1 MVGPGHRNSHGKR---HSDYAENGGGKRRNPGDDT--YAPGPDDTVYRYLCPSRKIGSII 55
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GGEI KQ+R++T++ IRI E+V GCDER++TI+SSS TN D+ + V PAQDALFR
Sbjct: 56 GRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFR 115
Query: 120 VHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
VH+++ +D + ++E E L +TVR+LVP+DQIGC+IGKGG +IQ IR++T A IR+L
Sbjct: 116 VHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLS 175
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY---QSS 235
+E+LP CA+S DELLQ++G+ VVRKAL+Q++SRLH+NPSRSQHLL SS + Y
Sbjct: 176 NENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPVGSHL 235
Query: 236 GVYLSAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
G +AP+VG SYG Y RR+E+SA+EFSLRL+C A N+GGVI
Sbjct: 236 GSSSTAPVVGITPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVI 295
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGGGIIKQIRQESGA IKVDSS E DDCII +S KEFFEDP SPTI AA+ LQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
KT+ ES P TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA EDE
Sbjct: 355 KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDE 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G LDV AL Q+T RL+AN FEREGAL+ PPV+PY P+ + +++G KY RD
Sbjct: 415 EMVQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRD 474
Query: 457 NQSRGRGNSYATG-----NLPGRDSYGSYGGS 483
+ G Y++G ++ DSY SYG S
Sbjct: 475 TKPLGHDYPYSSGYRGSDDISPIDSYASYGSS 506
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 285/557 (51%), Positives = 379/557 (68%), Gaps = 56/557 (10%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M+ ++ KR+ QSD NGGSKRR GD+ + I +DTV+RYLCP++KIGS+IG
Sbjct: 7 MSPDHRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIG 66
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GG+IVKQLR++T+S IRI E +PGCDER++TIYS S+ TN F D + +SPAQDALFR+
Sbjct: 67 RGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRI 126
Query: 121 HDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
HDR+VA+D+ ++D +T ++LVP+DQIGC++G+GGQ++QNIR+ET AQIRI+KD
Sbjct: 127 HDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDR 186
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS-----SSNIYQSS 235
++PLCAL+ DEL+Q++GE +V+KAL+QIASRLHENPSRSQ+LL SS S + +
Sbjct: 187 NMPLCALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSSGGYPAGSLMSHAG 246
Query: 236 GVYLS--APLVGSYGN---------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
G L APL+GSYG Y R++ A EF +RLV P NI VIGKGG +I
Sbjct: 247 GPRLVGLAPLMGSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALI 306
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESG 343
Q+RQE+ A+IKVDSS EG+DC+I IS +E FED SPTI A +RLQP+CS+K ER+SG
Sbjct: 307 NQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSG 366
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM----- 398
TTR+LVPS++IGC++G+GGAII+EMR T+A+IRIL EN+PKVA +D+EM
Sbjct: 367 LVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQVNF 426
Query: 399 ------------------------------VQITGSLDVASSALSQVTLRLRANTFEREG 428
VQI+G LDVA AL Q+T RLRAN F+REG
Sbjct: 427 MVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISGELDVAKEALIQITSRLRANVFDREG 486
Query: 429 ALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATG---NLPGRDSYGSYGGSLS 485
A++A PVLPYVP++ D D Y +RD++ RGN Y G + + Y YG +
Sbjct: 487 AVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSGVSAEGYSPYGAPVG 546
Query: 486 GGGNA-YGAYGDHSSGR 501
G + YG YG ++SGR
Sbjct: 547 GSSSTPYGVYGGYASGR 563
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 298/512 (58%), Positives = 376/512 (73%), Gaps = 35/512 (6%)
Query: 1 MAGQSNIN-YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
M G + N +GKR SD A NGG KRRNPGD+T G +DTVYRYLCP RKIGSII
Sbjct: 1 MVGPGHRNSHGKR---HSDYAENGGGKRRNPGDDT--YAPGPDDTVYRYLCPSRKIGSII 55
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GGEI KQ+R++T++ IRI E+V GCDER++TI+SSS TN D+ + V PAQDALFR
Sbjct: 56 GRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFR 115
Query: 120 VHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
VH+++ +D + ++E E L +TVR+LVP+DQIGC+IGKGG +IQ IR++T A IR+L
Sbjct: 116 VHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLS 175
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY---QSS 235
+E+LP CA+S DELLQ++G+ VVRKAL+Q++SRLH+NPSRSQHLL SS + Y
Sbjct: 176 NENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPVGSHL 235
Query: 236 GVYLSAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
G +AP+VG SYG Y RR+E+SA+EFSLRL+C A N+GGVI
Sbjct: 236 GSSSTAPVVGITPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVI 295
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGGGIIKQIRQESGA IKVDSS E DDCII +S KEFFEDP SPTI AA+ LQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
KT+ ES P TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA EDE
Sbjct: 355 KTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDE 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G LDV AL Q+T RL+AN FEREGAL+ PPV+PY P+ + +++G KY RD
Sbjct: 415 EMVQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRD 474
Query: 457 NQSRGRGNSYATG-----NLPGRDSYGSYGGS 483
+ G Y++G ++ DSY SYG S
Sbjct: 475 TKPLGHDYPYSSGYRGSDDIGPIDSYASYGSS 506
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 297/512 (58%), Positives = 375/512 (73%), Gaps = 35/512 (6%)
Query: 1 MAGQSNIN-YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
M G + N +GKR SD + NGG KRRNPGD+T G +DTVYRYLC RKIGSII
Sbjct: 1 MVGPGHRNSHGKR---HSDYSENGGGKRRNPGDDT--YAPGPDDTVYRYLCTSRKIGSII 55
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GGEI KQLR++T++ IRI E+VPGCDER++TI+SSS TN ED+ + V PAQDALFR
Sbjct: 56 GRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFR 115
Query: 120 VHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
VH++++A+D D+E E L +TVR+LVP+DQIGC+IGKGG +IQ IR++T +QIR+L
Sbjct: 116 VHEKLIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLS 175
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY---QSS 235
+E LP C +S DELLQ++G+P VVRKAL+Q++SRLH+NPSRSQHL S Y +
Sbjct: 176 NERLPACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPYPVGSRN 235
Query: 236 GVYLSAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
G +AP+VG YG Y RR+++SA++FSLRL+C A ++GGVI
Sbjct: 236 GSSSTAPVVGIAPMVSPYGGYKGDMVGDWPSIYQPRREDSSAKDFSLRLLCAASDVGGVI 295
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGGGIIKQIRQESGA IKVDSS AE DDCII +S KEFFEDP SPTI A +RLQP+CSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPKCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
KT+ ESG+P TTR+LV ++QIGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA EDE
Sbjct: 355 KTDPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDE 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G L+VA AL Q+T RL+AN FEREGAL+ PV+PY PM I+D KY RD
Sbjct: 415 EMVQISGDLEVARHALVQITTRLKANFFEREGALSGFQPVIPYHPMPASISDEPKYLGRD 474
Query: 457 NQSRGRGNSYATG-----NLPGRDSYGSYGGS 483
+ G Y+ G ++ DSY +YG S
Sbjct: 475 TKPAGHDYPYSGGYRASEDMLPVDSYANYGSS 506
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/517 (58%), Positives = 375/517 (72%), Gaps = 36/517 (6%)
Query: 1 MAGQSNIN-YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
M G + N +GKR SD A NGG KRRNPGD+T +DTVYRYLC RKIGSII
Sbjct: 1 MVGPGHRNSHGKR---YSDYAENGGGKRRNPGDDT--YAPCPDDTVYRYLCASRKIGSII 55
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GGEI KQLR++T++ IRI E+VPGCDER++TI+SSS TN ED+ + V PAQDALFR
Sbjct: 56 GRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFR 115
Query: 120 VHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
VH++++ +D D+E E L + VR+LVP+DQIGC+IGKGG +IQ IR++T + IR+L
Sbjct: 116 VHEKLITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLS 175
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY---QSS 235
EHLP CA+S DELLQ++G+P VVRKAL+Q++SRLH+NPSRSQHLL SS + Y
Sbjct: 176 TEHLPACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLLASSLTQPYPVGSRH 235
Query: 236 GVYLSAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
G + P+VG YG Y RR+E+SA+EFSLRL+C A ++GGVI
Sbjct: 236 GSSSTTPVVGIAPMVNPYGGYKGDMVGDWPSIYQPRREESSAKEFSLRLLCAASDVGGVI 295
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGGGIIKQIRQESGA IKVDSS AE DDCII +S KEFFEDP SPTI A +RLQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPISPTIDATVRLQPRCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
KT+ ESG+P TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA EDE
Sbjct: 355 KTDPESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDE 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMVQI+G LDVA AL Q+T RL+AN FEREG+L+ PV+PY P+ + D SKY RD
Sbjct: 415 EMVQISGDLDVAKHALVQITTRLKANFFEREGSLSGFQPVIPYHPLPASVADESKYLGRD 474
Query: 457 NQSRGRGNSYATG-----NLPGRDSYGSYGGSLSGGG 488
+ G Y+ G ++ DSY +YG S GG
Sbjct: 475 AK-LGHDYPYSGGYRASEDMLPVDSYANYGSSQVSGG 510
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 518 bits (1334), Expect = e-144, Method: Compositional matrix adjust.
Identities = 308/571 (53%), Positives = 392/571 (68%), Gaps = 59/571 (10%)
Query: 1 MAGQSNINYGKRTHFQSDAATN-GGSKRRNPG-DETEQRG---IGSEDTVYRYLCPLRKI 55
MAGQ KR+H + N +KRRNP DET R I +DTVYRYLCP+RKI
Sbjct: 1 MAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKI 60
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQD 115
GSIIG+GGEIVKQLR +TK+ IRI ETVPGCDER+VT+YS S+ +N FEDSGEF+ PA D
Sbjct: 61 GSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMD 120
Query: 116 ALFRVHDRIVAEDSL-ADDEFGEL------TLITVRMLVPADQIGCVIGKGGQVIQNIRT 168
AL R+H +++AED +DE ++ L+T ++LV +DQIGCVIGKGGQ++QNIR+
Sbjct: 121 ALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRS 180
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSS 228
ET AQIRILKD+ LPLCAL+ DEL+Q++GE AVV+KAL+Q+A+RLH+NPSR+QHLL S+
Sbjct: 181 ETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAV 240
Query: 229 SNIYQSSGVYL----SAPLVG------------------SYGNYSARRDEASAREFSLRL 266
+Y +SG + AP++G Y RDE S +EFS+R
Sbjct: 241 PGVYAASGSMVGSHGGAPIMGMAPIGGGYGGYKGDVVDYPRSMYPGSRDEGSVKEFSVRF 300
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTIT 325
VCP NIGGVIGKGGGII QIRQ+SGA+IKVDSS EGDDC+I IS +E FEDP S TI
Sbjct: 301 VCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIE 360
Query: 326 AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
AA+ LQPRCSEK ER+SG T+R+LV S++IGCLIG+GG+II+EMR T+A+IRIL+
Sbjct: 361 AAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSK 420
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA-HPPVLPYVPMSL 444
E++PK+A ED+EMVQI+G LD+A AL QV RLRAN F++E ++++ PPVL Y+P S
Sbjct: 421 EDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLFDKERSVSSLLPPVLAYLPASP 480
Query: 445 DITDGSKYGNRDNQSRGRGN-SYATG-----NLPGRDSYGSYGGSLSGGGNAYGAYGDHS 498
+ D Y RD + GRG SY+ G + D YG+YG S G G YGAYG ++
Sbjct: 481 EGPDSFSYEGRDGRRHGRGGYSYSDGYGGSSDFVSGDGYGNYGSSQLGRGGPYGAYGSYA 540
Query: 499 SGR----GLS-------------GHRKNHGY 512
+ R GLS R+NHGY
Sbjct: 541 AERTSTSGLSDRLSDRLSGQHGVSRRRNHGY 571
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 294/512 (57%), Positives = 372/512 (72%), Gaps = 36/512 (7%)
Query: 1 MAGQSNIN-YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
M G + N +GKR QSD + NGG KRRNPGD+T G +DTVYRYLC RKIGSII
Sbjct: 1 MVGPGHRNSHGKR---QSDYSENGGGKRRNPGDDT--YAPGPDDTVYRYLCTSRKIGSII 55
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
G+GGEI KQLRS+T++ IRI E+VP CDER++TI+SSS TN ED+ + V PAQDALFR
Sbjct: 56 GRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIEDTEDKVCPAQDALFR 115
Query: 120 VHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
VH+++ +D + E E L +TVR+LVP+DQIGC+IGKGG +IQ IR++T +QIR+L
Sbjct: 116 VHEKLATDDGPVNKENEESLGQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLS 175
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSS--- 235
+EHLPLCA S DELL + G+P VVRKAL+Q++SRLH NPSRSQHLL SS + +
Sbjct: 176 NEHLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGNPSRSQHLLASSLNQPFPVGSRL 235
Query: 236 GVYLSAPLVG------SYGNYS------------ARRDEASAREFSLRLVCPAGNIGGVI 277
G +AP+VG YG Y RR+ +S +EFSLRL+C A N+GGVI
Sbjct: 236 GSSSTAPVVGITPMVSPYGRYKGDMVGDWPSIYQPRREVSSPKEFSLRLLCAAANVGGVI 295
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSE 336
GKGGGIIKQIRQESGA IKVDSS AE DDCII +S KEFFEDP SPTI A +RLQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPRCSE 354
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
K + ESG+P TTR+LV +++IGCLIG+GG+II+E+R +RA+IRI++ ++VPKVA +DE
Sbjct: 355 KIDAESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDE 414
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD 456
EMV I+G LD A AL Q+T RL+AN FEREGAL+ PPV+PY P+ ++D KY +RD
Sbjct: 415 EMVLISGDLDFARHALLQITTRLKANFFEREGALSGFPPVIPYHPLPASVSD-EKYLSRD 473
Query: 457 NQSRGRGNSYATG-----NLPGRDSYGSYGGS 483
N+S G Y++G ++ D Y +YG S
Sbjct: 474 NKSAGHDYPYSSGYRASDDVLPVDRYANYGSS 505
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 256/437 (58%), Positives = 325/437 (74%), Gaps = 11/437 (2%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
+ G G EDTVYRYLCP+RK GSIIG+GGEI KQ+RSETK+N+RI+E +PGCDER+VTIY
Sbjct: 9 DNNGAGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIY 68
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED------SLADDEFGELTLITVRMLVP 148
S+SE TN ED +FV PA DALF+VHD IVAE+ DE+ E +TVRMLVP
Sbjct: 69 SNSEETNRIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVP 128
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL--SFDELLQVAGEPAVVRKAL 206
+DQIGC+IGKGGQVIQ +R +T AQIR++ D +LP+CAL S DELLQ+ G+P+ VR+AL
Sbjct: 129 SDQIGCLIGKGGQVIQKLRNDTNAQIRVIND-NLPICALALSHDELLQIIGDPSAVREAL 187
Query: 207 VQIASRLHENPSRSQHLLLSSSSNI-YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
Q+A L++NPSR Q+ LSSSS + +Q G+ +S + S+ NYSA RD A AR FS+
Sbjct: 188 YQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSSHKNYSAPRDAADARVFSIC 247
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA-EGDDCIIFISTKEFFEDPSPTI 324
+CPA N+GGVIGKGG I Q RQESGA+IKV + E DDCIIFIS KEFFED SPT+
Sbjct: 248 FICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQSPTV 307
Query: 325 TAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
AALRLQ RCSEK ++S D I+TR+L+PS+Q+GCLIG+GGA+ISEMRS T+A+IRI
Sbjct: 308 NAALRLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRIFQ 367
Query: 385 NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL 444
E+VP++A E+EEMVQITGSLD A AL+QV LRLRAN F+ + L P PY+ ++
Sbjct: 368 GEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFDMDRGLVLLPTFFPYISQTI 427
Query: 445 DITDGSKYGNRDNQSRG 461
+ + ++ +N G
Sbjct: 428 ETSSKPRHRKGENHPHG 444
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 291/519 (56%), Positives = 379/519 (73%), Gaps = 38/519 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M+G N ++GKR SD GG KRRNPGD+T G +DTVYRYLC RKIGSIIG
Sbjct: 1 MSGHRN-SHGKR---YSDYTETGGGKRRNPGDDT--YAPGPDDTVYRYLCASRKIGSIIG 54
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEI KQLR+ET++ IRI E+VPGC+ER++TI+SSS TN +D+ + V PAQDALFRV
Sbjct: 55 RGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRV 114
Query: 121 HDRIVAEDSLADDEFGELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
H+R+ ++S +++ E++ +TVR+LVP+DQIGC++GKGG +IQ IR+ET AQIR+L
Sbjct: 115 HERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSK 174
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYL 239
+H+P CA+S DELLQ++G+ VV+KAL Q++SRLH NPS+SQHLL SS + Y G +L
Sbjct: 175 DHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPY-PGGTHL 233
Query: 240 ----SAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
+AP+VG YG Y RRDE+SA+EFSLRL+C A N+GGVI
Sbjct: 234 GGSSAAPVVGITPVIPPYGGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAE-GDDCIIFISTKEFFEDP-SPTITAALRLQPRCS 335
GKGGGIIKQIRQESGA IKV SS ++ DDCII +S KEFFEDP SPTI AA+RLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
EK++ E + TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPY--VPMSLDITDGSKYG 453
EEMVQI+G LDVA AL Q+ RL+AN FEREG+L+A P V+PY +P + ++D KY
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVIPYHPLPAGVSVSDEPKYL 473
Query: 454 NRDNQSRGR---GNSYATG-NLPGRDSYGSYGGSLSGGG 488
+RD + G +++ T ++ DSY SYGGS + GG
Sbjct: 474 SRDTKPVGHYLYSSAFRTSDDMIPSDSYASYGGSQAPGG 512
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/519 (56%), Positives = 379/519 (73%), Gaps = 38/519 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
M+G N ++GKR SD GG KRRNPGD+T G +DTVYRYLC RKIGSIIG
Sbjct: 1 MSGHRN-SHGKR---YSDYTETGGGKRRNPGDDT--YAPGPDDTVYRYLCASRKIGSIIG 54
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+GGEI KQLR+ET++ IRI E+VPGC+ER++TI+SSS TN +D+ + V PAQDALFRV
Sbjct: 55 RGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRV 114
Query: 121 HDRIVAEDSLADDEFGELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
H+R+ ++S +++ E++ +TVR+LVP+DQIGC++GKGG +IQ IR+ET AQIR+L
Sbjct: 115 HERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSK 174
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYL 239
+H+P CA+S DELLQ++G+ VV+KAL Q++SRLH NPS+SQHLL SS + Y G +L
Sbjct: 175 DHIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPY-PGGTHL 233
Query: 240 ----SAPLVG------SYGNYSA------------RRDEASAREFSLRLVCPAGNIGGVI 277
+AP+VG YG Y RRDE+SA+EFSLRL+C A N+GGVI
Sbjct: 234 GGSSAAPVVGITPVIPPYGGYKGDVAGDWPSLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAE-GDDCIIFISTKEFFEDP-SPTITAALRLQPRCS 335
GKGGGIIKQIRQESGA IKV SS ++ DDCII +S KEFFEDP SPTI AA+RLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
EK++ E + TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPY--VPMSLDITDGSKYG 453
EEMVQI+G LDVA AL Q+ RL+AN FEREG+L+A P V+PY +P + ++D KY
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVIPYHPLPAGVSVSDEPKYL 473
Query: 454 NRDNQSRGR---GNSYATG-NLPGRDSYGSYGGSLSGGG 488
+RD + G +++ T ++ DSY SYGGS + GG
Sbjct: 474 SRDTKPVGHYLYSSAFRTSDDMIPSDSYASYGGSQAPGG 512
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 273/450 (60%), Positives = 340/450 (75%), Gaps = 12/450 (2%)
Query: 24 GSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV 83
S RN D Q I SEDTVYRYLCP++K GSIIGKGGEI KQ+RSETKSN+RI+E +
Sbjct: 2 ASTLRNIHD---QNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEAL 58
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA-----EDSLADDEFGEL 138
PGC+ER+VT+YS++E N F D GE V PA DALF+VHD +VA + + D++ GE
Sbjct: 59 PGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEK 118
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA--LSFDELLQVA 196
+TVRMLVP+DQIGCVIGKGGQVIQN+R +T AQIR++KD HLP CA LS DELL +
Sbjct: 119 QTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLII 177
Query: 197 GEPAVVRKALVQIASRLHENPSRSQH-LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
GEP VVR+AL Q+AS LH+NPSR QH LL SSSS+++Q + +SA L S+ NY+ RRD
Sbjct: 178 GEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRD 237
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
A AREF + +CPA N+GGVIGKGGG I QIRQE+GA+I+V++S + DDCIIFIS+KE
Sbjct: 238 IADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKE 297
Query: 316 FFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
F+ED SP + AA+RLQ RCSEK +++ D I+TR+LV S+QIGCLIG+GGA+ISEMRS
Sbjct: 298 FYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSV 357
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
TRA+IRIL E+VPK+A EDEEMVQITGS D A AL+QV LRLRAN+F+ + L P
Sbjct: 358 TRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPT 417
Query: 436 VLPYVPMSLDITDGSKYGNRDNQSRGRGNS 465
PY+P + + SKY RD+ S+ NS
Sbjct: 418 SFPYIPQVTESSSKSKYAKRDDHSKLNSNS 447
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/432 (61%), Positives = 332/432 (76%), Gaps = 9/432 (2%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
DTVYRYLCP++K GSIIGKGGEI KQ+RSETKSN+RI+E +PGC+ER+VT+YS++E N
Sbjct: 9 HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVA-----EDSLADDEFGELTLITVRMLVPADQIGCVI 156
F D GE V PA DALF+VHD +VA + + D++ GE +TVRMLVP+DQIGCVI
Sbjct: 69 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 128
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCA--LSFDELLQVAGEPAVVRKALVQIASRLH 214
GKGGQVIQN+R +T AQIR++KD HLP CA LS DELL + GEP VVR+AL Q+AS LH
Sbjct: 129 GKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLIIGEPLVVREALYQVASLLH 187
Query: 215 ENPSRSQH-LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
+NPSR QH LL SSSS+++Q + +SA L S+ NY+ RRD A AREF + +CPA N+
Sbjct: 188 DNPSRFQHLLLSSSSSSMHQPGAMLMSAALTSSHRNYAVRRDIADAREFCVCFICPAENV 247
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPR 333
GGVIGKGGG I QIRQE+GA+I+V++S + DDCIIFIS+KEF+ED SP + AA+RLQ R
Sbjct: 248 GGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQSPAVNAAIRLQQR 307
Query: 334 CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
CSEK +++ D I+TR+LV S+QIGCLIG+GGA+ISEMRS TRA+IRIL E+VPK+A
Sbjct: 308 CSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAR 367
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYG 453
EDEEMVQITGS D A AL+QV LRLRAN+F+ + L P PY+P + + SKY
Sbjct: 368 EDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYA 427
Query: 454 NRDNQSRGRGNS 465
RD+ S+ NS
Sbjct: 428 KRDDHSKLNSNS 439
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 459 bits (1181), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/443 (56%), Positives = 326/443 (73%), Gaps = 29/443 (6%)
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+R++T++ IRI E+V GCDER++TI+SSS TN D+ + V PAQDALFRVH+++ +D
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSIDD 60
Query: 129 SLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+ ++E E L +TVR+LVP+DQIGC+IGKGG +IQ IR++T A IR+L +E+LP CA+
Sbjct: 61 DIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAI 120
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY---------QSSGVY 238
S DELLQ++G+ VVRKAL+Q++SRLH+NPSRSQHLL SS + Y ++ V
Sbjct: 121 SGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPVGSHLGSSSTAPVV 180
Query: 239 LSAPLVGSYGNYS------------ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
PL+ SYG Y RR+E+SA+EFSLRL+C A N+GGVIGKGGGIIKQ
Sbjct: 181 GITPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQ 240
Query: 287 IRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP 345
IRQESGA IKVDSS E DDCII +S KEFFEDP SPTI AA+ LQPRCSEKT+ ES P
Sbjct: 241 IRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIP 299
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
TTR+LV +++IGCLIG+GG+II+E+R +RA+IRIL+ ENVPKVA EDEEMVQI+G L
Sbjct: 300 SYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDL 359
Query: 406 DVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNS 465
DV AL Q+T RL+AN FEREGAL+ PPV+PY P+ + +++G KY RD + G
Sbjct: 360 DVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHDYP 419
Query: 466 YATG-----NLPGRDSYGSYGGS 483
Y++G ++ DSY SYG S
Sbjct: 420 YSSGYRGSDDISPIDSYASYGSS 442
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 95/170 (55%), Gaps = 12/170 (7%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R LC +G +IGKGG I+KQ+R E+ + I++ + D+ I+T+ FED
Sbjct: 219 RLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITV----SAKEFFEDP 273
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
VSP +A + R S D + T R+LV +IGC+IGKGG +I I
Sbjct: 274 ---VSPTINAAVHLQPRC----SEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEI 326
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
R +RA IRIL E++P A +E++Q++G+ VVR AL+QI +RL N
Sbjct: 327 RRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKAN 376
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDE 88
G+E G+ R L P +IG IIGKGG I++ +RS+T ++IR+ +E +P C
Sbjct: 63 GNEESDEGLAQ--VTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPAC-- 118
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI 124
+ G L + SG+ + + AL +V R+
Sbjct: 119 -------AISGDELLQISGD-STVVRKALLQVSSRL 146
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/366 (60%), Positives = 278/366 (75%), Gaps = 26/366 (7%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T R++VP+DQIGC+IGKGGQ++QNIR+ET AQIRILKDEHLP CALS DEL+Q++GE A
Sbjct: 13 VTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALSTDELVQISGEVA 72
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS---------APLVGSYGNY- 250
VV+KAL QIA+RLHENPSR+QHLL S+ N+Y ++G + APL+ +YG Y
Sbjct: 73 VVKKALYQIATRLHENPSRTQHLLFSAVPNVYPATGSLIGPTGAPIVGIAPLMSTYGGYK 132
Query: 251 -----------SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
SA RDE S++EFSLR+VCP GNIGGVIGKGG II QIRQESGA IKVDS
Sbjct: 133 GDAGDWSRSLYSAPRDELSSKEFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDS 192
Query: 300 SGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQI 358
S AEGDDC+I +S KEFF+D SPTI AA+RLQPRCSEK R+SG TTR+LVP+++I
Sbjct: 193 STAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEKIARDSGLISFTTRLLVPTSRI 252
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
GCL+G+GG II+EMR T+A+IRIL +N+PKVA ED+EMVQI+G LDVA AL+ V+ R
Sbjct: 253 GCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRR 312
Query: 419 LRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGN----SYATGNLPGR 474
LRAN F+REGA++ PVLPY+P+S D +D Y +RD++ GRG+ Y + +
Sbjct: 313 LRANAFDREGAVSTFLPVLPYLPVSADGSDSLNYDSRDSKRHGRGHSYSSGYGSSDYTAA 372
Query: 475 DSYGSY 480
DSYG+Y
Sbjct: 373 DSYGAY 378
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
++ DA S P DE + S++ R +CP IG +IGKGG I+ Q+R E+
Sbjct: 131 YKGDAGDWSRSLYSAPRDE-----LSSKEFSLRIVCPTGNIGGVIGKGGTIINQIRQESG 185
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
+ I++ + D+ ++T+ F+D SP +A R+ R + +A D
Sbjct: 186 AVIKVDSSTAEGDDCLITV----SAKEFFDDQ---YSPTIEAAIRLQPR--CSEKIARDS 236
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
L T R+LVP +IGC++GKGG +I +R T+A IRIL ++LP A DE++Q
Sbjct: 237 --GLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQ 294
Query: 195 VAGEPAVVRKALVQIASRLHEN 216
++G+ V + AL ++ RL N
Sbjct: 295 ISGDLDVAKDALTHVSRRLRAN 316
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSS 97
G R + P +IG IIGKGG+IV+ +RSET + IRI E +P C S+
Sbjct: 9 GGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPC------ALSTD 62
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRI 124
E L + SGE V+ + AL+++ R+
Sbjct: 63 E---LVQISGE-VAVVKKALYQIATRL 85
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 357 bits (917), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/278 (65%), Positives = 215/278 (77%), Gaps = 24/278 (8%)
Query: 190 DELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSG----------VYL 239
DELLQ+ GE +VV+KAL QI++RLH+NPSRSQHLL S+ SN +QS G +
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQSGGSLTGPNAGAPIVG 60
Query: 240 SAPLVGSYGNYS-------------ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
APL+G YG Y A RD SA+EFSLRLVCP GNIGGVIGKGG +IKQ
Sbjct: 61 LAPLMGPYGGYKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQ 120
Query: 287 IRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP 345
IRQESGA IKVDSS AE DDCII IS+KEFFEDP SPTI AA+RLQP+CSEK++RESGD
Sbjct: 121 IRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVRLQPKCSEKSDRESGDS 180
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
TTR+LVP+++IGCLIG+GG+IISEMR T+A+IRIL+ EN+PKVA ED+EMVQITG L
Sbjct: 181 TFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDL 240
Query: 406 DVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMS 443
DVA +AL QVT RL+ N FEREGAL+A PP L Y+PMS
Sbjct: 241 DVARNALIQVTTRLKTNFFEREGALSAFPPPLSYLPMS 278
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 121/230 (52%), Gaps = 25/230 (10%)
Query: 24 GSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV 83
GS+ N + + +++ R +CP IG +IGKGG ++KQ+R E+ + I++ +
Sbjct: 76 GSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSA 135
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
D+ I++I S FED +SP DA R+ + + +D E G+ T T
Sbjct: 136 AEADDCIISISSK----EFFEDP---ISPTIDAAVRLQPKCSEK---SDRESGDSTF-TT 184
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R+LVP +IGC+IGKGG +I +R T+A IRIL E+LP A DE++Q+ G+ V R
Sbjct: 185 RLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDLDVAR 244
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
AL+Q+ +RL +N ++ G + P SY SAR
Sbjct: 245 NALIQVTTRLK--------------TNFFEREGALSAFPPPLSYLPMSAR 280
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/278 (60%), Positives = 205/278 (73%), Gaps = 15/278 (5%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
YSA RDE S REFS+R+VCP GNIGGVIGKGG II QIRQ+SGA+IKVDSS EGDDC+I
Sbjct: 2 YSAPRDEGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLI 61
Query: 310 FISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
ISTKEFF+D SPTI AA+RLQPRCS+K ER+SG TTR+LVPS++IGCLIG+GG I
Sbjct: 62 AISTKEFFDDSFSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTI 121
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
I+EMR T+A+IRIL E++PK+A ED+EMVQI+G LDVA AL QV RL+AN F++E
Sbjct: 122 ITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKER 181
Query: 429 ALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATG-----NLPGRDSYGSYGGS 483
A+ PV+PY+P S+D +DG Y +RD + GRG+SY++G +LP DSYGSYG
Sbjct: 182 AVPGFLPVMPYLPASVDGSDGLNYDSRDGKRHGRGHSYSSGYGGLSDLPPGDSYGSYGSP 241
Query: 484 LSGGGNAYGAYGDHSSGR----GLSGH-----RKNHGY 512
G G YGAYG + GR GL R+N GY
Sbjct: 242 QVGSGGPYGAYGSYGLGRTSTSGLPSQNGVSRRRNPGY 279
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R +CP IG +IGKGG I+ Q+R ++ + I++ + D+ ++ I + F+DS
Sbjct: 17 RVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTK----EFFDDS 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
SP +A R+ R D + D + T R+LVP+ +IGC+IGKGG +I +
Sbjct: 73 ---FSPTIEAAVRLQPR--CSDKVERDS--GIVSFTTRLLVPSSRIGCLIGKGGTIITEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
R T+A IRIL E LP A DE++Q++G+ V + ALVQ+ +RL N
Sbjct: 126 RRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKAN 175
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 41/165 (24%)
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDEL 192
G + +VR++ P IG VIGKGG +I IR ++ A I++ + L A+S E
Sbjct: 9 GSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEF 68
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
+ P + +A V++ R + R ++
Sbjct: 69 FDDSFSPTI--EAAVRLQPRCSDKVERDSGIV---------------------------- 98
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
F+ RL+ P+ IG +IGKGG II ++R+ + A+I++
Sbjct: 99 --------SFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKANIRI 135
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSEGTNLFE 104
R L P +IG +IGKGG I+ ++R TK+NIRI E +P +SE + +
Sbjct: 103 RLLVPSSRIGCLIGKGGTIITEMRRLTKANIRILPKEDLPKI---------ASEDDEMVQ 153
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPA 149
SG+ + A+DAL +V R+ A +L D E + V +PA
Sbjct: 154 ISGD-LDVAKDALVQVLTRLKA--NLFDKERAVPGFLPVMPYLPA 195
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 296/505 (58%), Gaps = 52/505 (10%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEIVKQ 68
KR HF SD +G KR N + I SE +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 23 KRPHFNSD---DGKRKRLN--SRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKA 77
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGT-----NLFEDSGEFVSP---AQDALFRV 120
LR TK+ IR+++++PG DER++ I++ S T N+ D E + P AQDAL ++
Sbjct: 78 LRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKI 137
Query: 121 HDRIVAEDSL----ADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
HD+I A++ L ++ + + R+LVP +Q+GC++GKGG +IQ +R +T A IR+
Sbjct: 138 HDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 197
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSSSNIY 232
L E+LP CAL DEL+Q++G ++VRKAL +I++RLH++P + + ++ +S+ +
Sbjct: 198 LPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKH 257
Query: 233 QSSGVYLSA---------------PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
Q+ A PL+ Y N + A A EFS++++C + +IG VI
Sbjct: 258 QAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVI 317
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCS 335
GK GG ++Q+ Q++GA ++V G ++ +I +S++E +DP SPTI A + L + S
Sbjct: 318 GKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS 377
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
E +TTR++VPS ++GC+IG GG +I+EMR T A IR+ + + PK D
Sbjct: 378 TLAENHH----LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFD 433
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP-PVLPYVPMSLDITDGSKYGN 454
EE+VQ+ G +A AL+++ RLR T R+G+ + +P P P+ +DI N
Sbjct: 434 EELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNNPTPFAPFDGPPVDILP-----N 487
Query: 455 RDNQSRGR-GNSYATGNLPGRDSYG 478
R+ GR NS G P YG
Sbjct: 488 REFMLYGRSANSPPYGGPPNDPPYG 512
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 296/505 (58%), Gaps = 52/505 (10%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEIVKQ 68
KR HF SD +G KR N + I SE +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 16 KRPHFNSD---DGKRKRLN--SRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKA 70
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGT-----NLFEDSGEFVSP---AQDALFRV 120
LR TK+ IR+++++PG DER++ I++ S T N+ D E + P AQDAL ++
Sbjct: 71 LRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKI 130
Query: 121 HDRIVAEDSL----ADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
HD+I A++ L ++ + + R+LVP +Q+GC++GKGG +IQ +R +T A IR+
Sbjct: 131 HDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 190
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSSSNIY 232
L E+LP CAL DEL+Q++G ++VRKAL +I++RLH++P + + ++ +S+ +
Sbjct: 191 LPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKH 250
Query: 233 QSSGVYLSA---------------PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
Q+ A PL+ Y N + A A EFS++++C + +IG VI
Sbjct: 251 QAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVI 310
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCS 335
GK GG ++Q+ Q++GA ++V G ++ +I +S++E +DP SPTI A + L + S
Sbjct: 311 GKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS 370
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
E +TTR++VPS ++GC+IG GG +I+EMR T A IR+ + + PK D
Sbjct: 371 TLAENHH----LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFD 426
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP-PVLPYVPMSLDITDGSKYGN 454
EE+VQ+ G +A AL+++ RLR T R+G+ + +P P P+ +DI N
Sbjct: 427 EELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNNPTPFAPFDGPPVDILP-----N 480
Query: 455 RDNQSRGR-GNSYATGNLPGRDSYG 478
R+ GR NS G P YG
Sbjct: 481 REFMLYGRSANSPPYGGPPNDPPYG 505
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 296/505 (58%), Gaps = 52/505 (10%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEIVKQ 68
KR HF SD +G KR N + I SE +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 16 KRPHFNSD---DGKRKRLN--SRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKA 70
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGT-----NLFEDSGEFVSP---AQDALFRV 120
LR TK+ IR+++++PG DER++ I++ S T N+ D E + P AQDAL ++
Sbjct: 71 LRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKI 130
Query: 121 HDRIVAEDSL----ADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
HD+I A++ L ++ + + R+LVP +Q+GC++GKGG +IQ +R +T A IR+
Sbjct: 131 HDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRV 190
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSSSNIY 232
L E+LP CAL DEL+Q++G ++VRKAL +I++RLH++P + + ++ +S+ +
Sbjct: 191 LPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQRKH 250
Query: 233 QSSGVYLSA---------------PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
Q+ A PL+ Y N + A A EFS++++C + +IG VI
Sbjct: 251 QAPPQLPHANPMLPHLHVDHSPQIPLLDPYRNRPLQYHSAEAEEFSIKILCASEHIGQVI 310
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCS 335
GK GG ++Q+ Q++GA ++V G ++ +I +S++E +DP SPTI A + L + S
Sbjct: 311 GKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVS 370
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
E +TTR++VPS ++GC+IG GG +I+EMR T A IR+ + + PK D
Sbjct: 371 TLAENHH----LTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFD 426
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP-PVLPYVPMSLDITDGSKYGN 454
EE+VQ+ G +A AL+++ RLR T R+G+ + +P P P+ +DI N
Sbjct: 427 EELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNNPTPFAPFDGPPVDI-----LPN 480
Query: 455 RDNQSRGR-GNSYATGNLPGRDSYG 478
R+ GR NS G P YG
Sbjct: 481 REFMLYGRSANSPPYGGPPNDPPYG 505
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 267/440 (60%), Gaps = 34/440 (7%)
Query: 11 KRTH--FQSDAATNGGSKRRNPGDE--TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIV 66
KR+H F+ D+ +RR G E E +D VYR LCP KIGS+IGKGG I+
Sbjct: 9 KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGSVIGKGGSII 68
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYSS-------------SEGTNLFEDSGEFVSP- 112
K LR+ET + I++++ +PG DER++ I +S E E +GE +P
Sbjct: 69 KSLRNETGAKIKVADGIPGSDERVIFISASPRERREGKPRGGSKEMDKDKEQNGEESTPL 128
Query: 113 --AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
+Q+ALF+V RIV + +DE +T R+LVP++QIGC++GK G++I+ +R E+
Sbjct: 129 PASQEALFKVFARIVEGEEFDEDEDSSRN-VTARLLVPSNQIGCLLGKAGKIIEQMRVES 187
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ-----HLLL 225
AQIR+L E LP CA DEL+Q+ GE A+V+KAL I++RL++NP R + HL
Sbjct: 188 GAQIRVLPREQLPKCAYHTDELVQLTGELALVKKALTTISTRLYDNPPRDKPPQAGHLGP 247
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
S I G L GN S E EF++RL+CP IG VIGKGG II+
Sbjct: 248 FQESTIL--PGTLLPPGAFFPQGNASIAPVEG---EFAVRLLCPNEKIGSVIGKGGMIIR 302
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFF-EDPSPTITAALRLQPRCSEKTERESGD 344
IR+E+ A IK+ + A ++ +I I++ E E SP + A L+LQ R S+ + + G
Sbjct: 303 SIREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDG- 361
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
+TTR LVPSA IGCL+G+ G+II++MR TRA+IR+L+ E +PK A+ED+E+VQ+ G
Sbjct: 362 -AMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGD 420
Query: 405 LDVASSALSQVTLRLRANTF 424
+ VA A+ ++ RLRAN F
Sbjct: 421 ITVARDAVIEIITRLRANIF 440
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 218/574 (37%), Positives = 310/574 (54%), Gaps = 76/574 (13%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGG-SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
MAG + GKRT + D A N +KRRN G EQ G++ TVYR LCP IGS+I
Sbjct: 1 MAG---LYSGKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVI 57
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS------SEGTNLFEDSGEFVSPA 113
GKGG+++K +R ET+S IR+++ VPG DER++ I+SS + + ++ E V PA
Sbjct: 58 GKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPA 117
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
QD L RVH IV E S D++ + R+LV QIG +IGKGG IQ +R+E+ AQ
Sbjct: 118 QDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQ 177
Query: 174 IRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ----HLLLSSSS 229
I+I + + LP CA SFDEL+ ++G+ A V+KAL +++ L ++P + Q +L ++
Sbjct: 178 IQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQ 237
Query: 230 NIYQSSGV-------------------YLSAPLVG------------------------- 245
+ SGV LSAP++G
Sbjct: 238 SSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPA 297
Query: 246 --SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
S+ + + ++ EFS+R++CP IGGVIGKGG IK +R ++GASI+V+ + E
Sbjct: 298 LPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE 357
Query: 304 GDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
D+ +I +S E +D SPTI A L LQ + S T++ D I+TR LVPS IGCL+
Sbjct: 358 SDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDK---DGAISTRFLVPSKHIGCLL 414
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
G+GG IISEMR TRA+IRI + P E+EE+VQ+TG VA AL Q+ RLR N
Sbjct: 415 GKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLREN 474
Query: 423 TFEREGALAAHPPVLPYVPMSLD--ITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSY 480
F+ + + VLP +S+ + S YG R G + GR + G
Sbjct: 475 IFKDKDGASNTDSVLPLSSLSVPSAVPLSSSYGTRKYDIVS-----PRGAIAGRSAAGLS 529
Query: 481 G-GSLSGGGNAYGAYGDHSSGR----GLSGHRKN 509
G G+L G +Y + ++ R GLSG N
Sbjct: 530 GFGALQAGTGSYASLQPYAPTRTFGIGLSGGHLN 563
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 186/438 (42%), Positives = 264/438 (60%), Gaps = 34/438 (7%)
Query: 11 KRTH--FQSDAATNGGSKRRNPGDE--TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIV 66
KR+H F+ D+ +RR G E E +D VYR LCP KIGS+IGKGG I+
Sbjct: 9 KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGSVIGKGGSII 68
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYS-----------SSEGTNLFEDSGEFVSP--- 112
K LR+ET + I++++ +PG DER++ I S E E +GE +P
Sbjct: 69 KSLRNETGAKIKVADGIPGSDERVIFISPRERREGKPRGGSKEMDKDKEQNGEESTPLPA 128
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+Q+ALF+V RIV + +DE +T R+LVP++QIGC++GK G++I+ +R E+ A
Sbjct: 129 SQEALFKVFARIVEGEEFDEDEDSSRN-VTARLLVPSNQIGCLLGKAGKIIEQMRVESGA 187
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ-----HLLLSS 227
QIR+L E LP CA DELL GE A+V+KAL I++RL++NP R + HL
Sbjct: 188 QIRVLPREQLPKCAYHTDELL--TGELALVKKALTTISTRLYDNPPRDKPPQAGHLGPFQ 245
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
S I G L GN S E EF++RL+CP IG VIGKGG II+ I
Sbjct: 246 ESTIL--PGTLLPPGAFFPQGNASIAPVEG---EFAVRLLCPNEKIGSVIGKGGMIIRSI 300
Query: 288 RQESGASIKVDSSGAEGDDCIIFISTKEFF-EDPSPTITAALRLQPRCSEKTERESGDPV 346
R+E+ A IK+ + A ++ +I I++ E E SP + A L+LQ R S+ + + G
Sbjct: 301 REETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDG--A 358
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+TTR LVPSA IGCL+G+ G+II++MR TRA+IR+L+ E +PK A+ED+E+VQ+ G +
Sbjct: 359 MTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAHEDDELVQVVGDIT 418
Query: 407 VASSALSQVTLRLRANTF 424
VA A+ ++ RLRAN F
Sbjct: 419 VARDAVIEIITRLRANIF 436
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 162/271 (59%), Positives = 198/271 (73%), Gaps = 19/271 (7%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
YSA RDE +++EFSLR+VCP NIG VIGKGG II QIRQESGA+IKVDSS AEGDDC+I
Sbjct: 19 YSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVAEGDDCLI 78
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
IS KE ++ SPTI AA+RLQPRCSEK ER+SG TTR+LVPS++IGCL+G+GGAII
Sbjct: 79 TISAKEIYDHYSPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCLLGKGGAII 138
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
EMR T+A IRI EN+PKVA +D+EMVQI G LDVA AL Q++ RLRAN F+REGA
Sbjct: 139 DEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAKDALIQISRRLRANVFDREGA 198
Query: 430 LAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGR---------GNSYATGNLPGRDSYGSY 480
++A PVLPY+P+S + ++G Y +RD + GR + YA+G D YGSY
Sbjct: 199 MSAILPVLPYLPVSAEGSEGLNYDSRDGKRHGRGSSYAGGYSSSDYASG-----DGYGSY 253
Query: 481 GGS-LSGGGNAYGAYGDHSSGR----GLSGH 506
G S ++ G YGAYG +SSGR GLSG
Sbjct: 254 GSSQINASGGPYGAYGSYSSGRTGTSGLSGQ 284
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 17/202 (8%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F+ D S P DE + S++ R +CP IG++IGKGG I+ Q+R E+
Sbjct: 7 FKGDTGDWSRSLYSAPRDE-----LASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESG 61
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
+ I++ +V D+ ++TI S+ E + + SP +A R+ R + + D
Sbjct: 62 ATIKVDSSVAEGDDCLITI-SAKEIYDHY-------SPTIEAAVRLQPR--CSEKMERDS 111
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
L T R+LVP+ +IGC++GKGG +I +R T+A IRI + E+LP A DE++Q
Sbjct: 112 --GLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQ 169
Query: 195 VAGEPAVVRKALVQIASRLHEN 216
+AG+ V + AL+QI+ RL N
Sbjct: 170 IAGDLDVAKDALIQISRRLRAN 191
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 257/428 (60%), Gaps = 41/428 (9%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+D V+R LCP KIGS+IGKGG I+K LR E+ + I+I++ +PG DER++ I S+ G +
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 102 L---FEDSGEFVSPAQDALFRVHDRIVAEDSLA-----DDEFGELTLITVRMLVPADQIG 153
+ + E ++PAQ+ALF+VH RI+A+ + D E + R+LVP +QIG
Sbjct: 61 RGRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIG 120
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
C++GKGG++I+ +R T AQIR+L + LP CAL DEL+QV+G+ + ++KAL+ I++RL
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSA-----------------PLVG-----SYGNYS 251
ENP R + ++ + + YL+ PL G S GN S
Sbjct: 181 QENPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGLGPEPLEGRSWTISSGNLS 240
Query: 252 ARRDE---------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
R + + E RL+CP+ IG VIGKGG II +R+++GA IK+ ++
Sbjct: 241 LDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVP 300
Query: 303 EGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCL 361
D+ +I +S E D SP + A +++Q R + + + D +ITTR+LVP+ QIGCL
Sbjct: 301 GSDERVIIVSALELPGDSFSPALEAMIQVQSRITAEMGGDK-DGIITTRLLVPTNQIGCL 359
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
+G+GG+II +MR ATRA+IR+L + +P+ A + +E+VQI G VA AL QV RLR
Sbjct: 360 LGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLRN 419
Query: 422 NTFEREGA 429
N F G+
Sbjct: 420 NAFRESGS 427
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 12/185 (6%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
E R G + V+R LCP KIGS+IGKGG I+ LR +T + I+I+ VPG DER++ +
Sbjct: 251 EGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIANAVPGSDERVIIVS 310
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
+ E G+ SPA +A+ +V RI AE + D+ G +IT R+LVP +QIGC
Sbjct: 311 A-------LELPGDSFSPALEAMIQVQSRITAE--MGGDKDG---IITTRLLVPTNQIGC 358
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
++GKGG +I+++R TRA IR+L + LP CAL DEL+Q+ G+ V R+AL Q+ SRL
Sbjct: 359 LLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVISRLR 418
Query: 215 ENPSR 219
N R
Sbjct: 419 NNAFR 423
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGC 86
D ++Q S+ V R L P +IG ++GKGG+I++Q+R T + IR+ + +PGC
Sbjct: 96 DGSDQEEEPSQQVVTRLLVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGC 152
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 283/507 (55%), Gaps = 58/507 (11%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLR 70
KRTHF SD +G KR N + +TVYR LCP +KIGS++G+GG IVK LR
Sbjct: 16 KRTHFNSD---DGNRKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALR 72
Query: 71 SETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP------------AQDALF 118
ETK+ IR+++++PG +ER++ I+ + + +++ + +S AQDAL
Sbjct: 73 EETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCFAQDALL 132
Query: 119 RVHDRIVAEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQI 174
++HD+I + D E + +T R+LVP +Q+GC++GKGG +IQ +R +T A I
Sbjct: 133 KIHDKISTHEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 192
Query: 175 RILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL---LSSSSN- 230
RIL + LP CAL DEL+Q++G P++VRKAL +I++RLH++P + L + +S+
Sbjct: 193 RILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEEIIDASTQR 252
Query: 231 ---------------IYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
YQ PL+ Y + ++ A EFS+R++C + IG
Sbjct: 253 KRESPPPLPHENLMLPYQHVDRLPPMPLLDPYRSRPSQYPVPEAEEFSVRILCASELIGP 312
Query: 276 VIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTITAALR 329
VIGK G ++Q+ Q++GA I V D+SG + +I +S+KE DP SP I A +
Sbjct: 313 VIGKSGANVRQVEQQTGARILVQELDKDASG----ERLIVLSSKEIPGDPVSPAIEALIL 368
Query: 330 LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP 389
L + S +E+ + TR++VPS+++GC++G GG +I+EMR A IR+ + + P
Sbjct: 369 LHSKVSASSEKRH----LITRLVVPSSKVGCILGEGGKVITEMRRRIGAEIRVYSKADKP 424
Query: 390 KVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDG 449
K DEE+VQ+ G D+A AL+++ RLR T R+G +P LP P D G
Sbjct: 425 KYLSFDEELVQVAGPPDIARDALTEIASRLRTRTL-RDGGSGNNP--LPLAPS--DGPRG 479
Query: 450 SKYGNRDNQSRGRGNSYATGNLPGRDS 476
+ +R+ GR + G P DS
Sbjct: 480 DIFPSREFTQNGRPANPPYGR-PANDS 505
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 279/473 (58%), Gaps = 57/473 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEI 65
N KR H SD KR+ + + SE +T+YR LCP +KIGS++G+GG+I
Sbjct: 10 NSKKRRHSNSDDG-----KRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDI 64
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--------VSP---AQ 114
VK LR ETK+ IR+++++PG DER++ I++ L +++ E + P AQ
Sbjct: 65 VKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQ 124
Query: 115 DALFRVHDRIVAE---DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
DAL ++HD+IVA+ D +A DE + +T R+LV +Q+GC++GKGG +IQ +R++T
Sbjct: 125 DALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLLGKGGSIIQQLRSDTG 182
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSS 227
A IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S
Sbjct: 183 AGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDE-------------ASAREFSLRLVCPAGNIG 274
+ ++S + P++ ++ + EFS+R++C + IG
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIRILCASELIG 302
Query: 275 GVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTITAAL 328
VIGK G ++++ Q++GA IKV D+SG + +I +S+ E +P SPTI A +
Sbjct: 303 SVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIVSSNEIPTEPISPTIEALI 358
Query: 329 RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
L + S +E+ +TR++VPS ++GC++G GG +I+EMR T A IR+ + +
Sbjct: 359 LLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK 414
Query: 389 PKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVP 441
PK +E+VQ+ G +A AL+++ RLR T R+ + A +PP P+ P
Sbjct: 415 PKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTL-RDTSTANNPP--PFAP 464
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 272/459 (59%), Gaps = 57/459 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
N KRTH SD +G KR N + +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE---------FVSP--AQDA 116
LR ETK+ IR+++++PG DER++ I++ +++ E F S AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 117 LFRVHDRIVAE---DSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
L ++HD+IV++ D +A+DE E +T R+LV +Q+GC++GKGG +IQ +R+ T A
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSS 228
IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S+
Sbjct: 187 GIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIIDAST 246
Query: 229 SNIYQSSGV--------YLSA------PLVGSY---GNYSARRDEASAREFSLRLVCPAG 271
+S + +L + PL+ Y Y E EFS+R++C +
Sbjct: 247 QRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPYRSGPQYPVTETE----EFSIRILCASE 302
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTIT 325
IG VIGK G ++++ Q++GA IKV D+SG + +I IS+ E +P SP I
Sbjct: 303 LIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIISSNEIPAEPISPAIE 358
Query: 326 AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
A + L + S +E+ +TR++VPS+++GC+IG GG +I++MR T A IR+ +
Sbjct: 359 ALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSK 414
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
+ PK D+E+VQ+ G +A AL+++ RLR T
Sbjct: 415 ADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTL 453
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P++ +G ++G GG ++E+R + A +R+ A E +V+I G+LD
Sbjct: 682 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQ 736
Query: 408 ASSALSQVTLRLRANTFEREGALAAHPPVLP 438
A +A S + + AN+ +++ ++ P+ P
Sbjct: 737 AKAAQSLLQGFISANSRQQQQPYSSRMPLYP 767
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 144/246 (58%), Positives = 180/246 (73%), Gaps = 11/246 (4%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
YSA RDE +++EFSLR+VCP NIG VIGKGG II QIRQESGA+IKVDSS +EGDDC+I
Sbjct: 19 YSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSASEGDDCLI 78
Query: 310 FISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
IS KE +D SPTI AALRLQPRCSEK ER+SG TTR+LVPS+ IGCL+G+GG I
Sbjct: 79 TISAKEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFTTRLLVPSSHIGCLLGKGGLI 138
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
I EMR T+A IRI + +PK A +D+EMVQI+G LD+A AL Q++ RLRAN F+REG
Sbjct: 139 IDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAKDALIQISRRLRANAFDREG 198
Query: 429 ALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGGSLSGGG 488
++A PV PY+P+S + +G Y +RD++ GRGN+YA G YG S G
Sbjct: 199 LMSAILPVFPYLPVSAEGLEGRHYDSRDDKRHGRGNTYA----------GGYGASDYAVG 248
Query: 489 NAYGAY 494
++YG+Y
Sbjct: 249 DSYGSY 254
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 16/210 (7%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F+ D S P DE + S++ R +CP IG++IGKGG I+ Q+R E+
Sbjct: 7 FKGDTGDWSRSLYSAPRDE-----LASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESG 61
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
+ I++ + D+ ++TI + E + SP +A R+ R + + D
Sbjct: 62 ATIKVDSSASEGDDCLITISAK-------EICDDQYSPTIEAALRLQPR--CSEKMERDS 112
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
L T R+LVP+ IGC++GKGG +I +R T+A IRI + + LP AL DE++Q
Sbjct: 113 --GLFSFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQ 170
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLL 224
++G+ + + AL+QI+ RL N + L+
Sbjct: 171 ISGDLDIAKDALIQISRRLRANAFDREGLM 200
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 171/459 (37%), Positives = 272/459 (59%), Gaps = 57/459 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
N KRTH SD +G KR N + +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE---------FVSP--AQDA 116
LR ETK+ IR+++++PG DER++ I++ +++ E F S AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 117 LFRVHDRIVAE---DSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
L ++HD+IV++ D +A+DE E +T R+LV +Q+GC++GKGG +IQ +R+ T A
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSS 228
IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S+
Sbjct: 187 GIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIIDAST 246
Query: 229 SNIYQSSGV--------YLSA------PLVGSY---GNYSARRDEASAREFSLRLVCPAG 271
+S + +L + PL+ Y Y E EFS+R++C +
Sbjct: 247 QRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPYRSGPQYPVTETE----EFSIRILCASE 302
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTIT 325
IG VIGK G ++++ Q++GA IKV D+SG + +I IS+ E +P SP I
Sbjct: 303 LIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIISSNEIPAEPISPAIE 358
Query: 326 AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
A + L + S +E+ +TR++VPS+++GC+IG GG +I++MR T A IR+ +
Sbjct: 359 ALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSK 414
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
+ PK D+E+VQ+ G +A AL+++ RLR T
Sbjct: 415 ADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTL 453
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P++ +G ++G GG ++E+R + A +R+ A E +V+I G+LD
Sbjct: 681 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQ 735
Query: 408 ASSALSQVTLRLRANTFEREGALAAHPPVLP 438
A +A S + + AN+ +++ ++ P+ P
Sbjct: 736 AKAAQSLLQGFISANSRQQQQPYSSRMPLYP 766
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 195/476 (40%), Positives = 289/476 (60%), Gaps = 63/476 (13%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE---DTVYRYLCPLRKIGS 57
M G ++ KR +FQ G +KR + + ++ G+ DTVYR LCP +KIG
Sbjct: 1 MEGTRRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGG 58
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS----------SSEGTNLFE--D 105
+IGKGG IVK LR ET++ I ++++VPG DER++ IYS S+E + E D
Sbjct: 59 VIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQD 118
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIGKGGQV 162
E PAQDAL +VH+RI+ ED EF E T++T R+LVP + +GC++GK G V
Sbjct: 119 HMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDV 178
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ- 221
IQ +R+ET A IR+L EHLP CA+S DEL+Q++G+PAV +KAL ++++ LH+NP + +
Sbjct: 179 IQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKP 238
Query: 222 -------------HLLLSSSSNIYQSSGVYLS-----------APLVGSY---------- 247
H +S N+ S P +G Y
Sbjct: 239 PSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGG 298
Query: 248 --GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
G ++ EAS EFS++++CPAG IGGVIGKGG +KQ++QE+GASI V+ + AE +
Sbjct: 299 FDGVHAGHGGEASG-EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESE 357
Query: 306 DCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ +I +S+ E +P S TI A L+LQ + SE +++ +TTR+LVPS+++GC++G+
Sbjct: 358 ERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGG----MTTRLLVPSSKVGCILGQ 413
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
GG +I+EMR T+A IR+ + E+ PK A +DEE+VQI+G+ VA AL+++ RLR
Sbjct: 414 GGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 469
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 27/185 (14%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI------STKEF-- 316
R++CP+ IGGVIGKGGGI+K +R+E+ A I V S D+ +I I + KE
Sbjct: 48 RILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDS 107
Query: 317 FEDPS------------PTITAALRLQPRCSEKT-------ERESGDPVITTRILVPSAQ 357
EDP P A +++ R E+ E ++ + V+T R+LVP+
Sbjct: 108 NEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNM 167
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
+GCL+G+ G +I +RS T A+IR+L E++P A +E+VQI+G VA AL +V+
Sbjct: 168 VGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVST 227
Query: 418 RLRAN 422
L N
Sbjct: 228 LLHQN 232
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 199/476 (41%), Positives = 291/476 (61%), Gaps = 63/476 (13%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE---DTVYRYLCPLRKIGS 57
M G ++ KR +FQ G +KR + + ++ G+ DTVYR LCP +KIG
Sbjct: 29 MEGXRRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGG 86
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS----------SSEGTNLFE--D 105
+IGKGG IVK LR ET++ I ++++VPG DER++ IYS S+E E D
Sbjct: 87 VIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQD 146
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIGKGGQV 162
E PAQDAL +VH+RI+ ED EF E T++T R+LVP + +GC++GK G V
Sbjct: 147 HMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDV 206
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ- 221
IQ +R+ET A IR+L EHLP CA+S DEL+Q++G+PAV +KAL ++++ LH+NP + +
Sbjct: 207 IQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKP 266
Query: 222 -------------HLLLSSSSNI------------YQSSGV--------YLSAPLV---G 245
H +S N+ S GV Y S P V G
Sbjct: 267 PSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGG 326
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
G ++ EAS EFS++++CPAG IGGVIGKGG +KQ++QE+GASI V+ + AE +
Sbjct: 327 FDGVHAGHGGEASG-EFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESE 385
Query: 306 DCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ +I +S+ E +P S TI A L+LQ + SE +++ +TTR+LVPS+++GC++G+
Sbjct: 386 ERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGG----MTTRLLVPSSKVGCILGQ 441
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
GG +I+EMR T+A IR+ + E+ PK A +DEE+VQI+G+ VA AL+++ RLR
Sbjct: 442 GGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLR 497
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 27/185 (14%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI------STKEFF- 317
R++CP+ IGGVIGKGGGI+K +R+E+ A I V S D+ +I I + KE
Sbjct: 76 RILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNS 135
Query: 318 -EDPS------------PTITAALRLQPRCSEKT-------ERESGDPVITTRILVPSAQ 357
EDP P A +++ R E+ E ++ + V+T R+LVP+
Sbjct: 136 NEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNM 195
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
+GCL+G+ G +I +RS T A+IR+L E++P A +E+VQI+G VA AL +V+
Sbjct: 196 VGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVST 255
Query: 418 RLRAN 422
L N
Sbjct: 256 LLHQN 260
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/456 (35%), Positives = 268/456 (58%), Gaps = 54/456 (11%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEI 65
N KR H SD KR+ + + SE +T+YR LCP +KIGS++G+GG+I
Sbjct: 10 NSKKRRHSNSD-----DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDI 64
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--------VSP---AQ 114
VK LR ETK+ IR+++++PG DER++ I++ L +++ E + P AQ
Sbjct: 65 VKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQ 124
Query: 115 DALFRVHDRIVAE---DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
DAL ++HD+IVA+ D +A DE + +T R+LV +Q+GC++GKGG +IQ +R++T
Sbjct: 125 DALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLLGKGGSIIQQLRSDTG 182
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSS 227
A IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S
Sbjct: 183 AGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDE-------------ASAREFSLRLVCPAGNIG 274
+ ++S + P++ ++ + EFS+R++C + IG
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIRILCASELIG 302
Query: 275 GVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTITAAL 328
VIGK G ++++ Q++GA IKV D+SG +I +S+ E +P SPTI A +
Sbjct: 303 SVIGKSGANVRRVEQQTGARIKVQEIDKDASGER----LIIVSSNEIPTEPISPTIEALI 358
Query: 329 RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
L + S +E+ +TR++VPS ++GC++G GG +I+EMR T A IR+ + +
Sbjct: 359 LLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK 414
Query: 389 PKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
PK +E+VQ+ G +A AL+++ RLR T
Sbjct: 415 PKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTL 450
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 193/480 (40%), Positives = 279/480 (58%), Gaps = 58/480 (12%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLR 70
+ F+ T G K N G E DTVYR LCP RKIG +IGKGG I+K LR
Sbjct: 13 QNNQFKRKGVTRKG-KWNNSGREESSGNPLPVDTVYRILCPSRKIGGVIGKGGGIIKGLR 71
Query: 71 SETKSNIRISETVPGCDERIVTIYSSSEGTN---------LFEDSGEFVSP---AQDALF 118
ET++ I +++ VPG DER++ IYSS E + E+ + + P AQDAL
Sbjct: 72 EETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIMEPYCAAQDALL 131
Query: 119 RVHDRIVAED---SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIR 175
+VHDRIV ED + D+ E +T R+LVP + +GC++GK G VIQ +R+ET A IR
Sbjct: 132 KVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 191
Query: 176 ILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ-------------H 222
+L +HLP CA+S DEL+Q++ +P V +KAL ++++ LH+NP + + H
Sbjct: 192 VLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPSVPMPYSGQSFH 251
Query: 223 LLLSSSSNI----------YQSSGVYLSAPLVGSYGNYSA-------------RRDEASA 259
N+ + SS P++G YG+ S+ E SA
Sbjct: 252 PPGGPMKNLPPLGSPMWPHHNSSHSIPPMPIMGRYGSQSSGFGPGGFDDVPRGHVAEPSA 311
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
EFS++++C AG IGGVIGKGG +K ++Q++GASI V+ + AE D+ +I +S E +
Sbjct: 312 -EFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSASEALWN 370
Query: 320 P-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P S TI A L+LQ + S+ +E+ + ITTR+LVPS+++GC++G+GG +I+EMR T+A
Sbjct: 371 PRSQTIDAILQLQNKTSDFSEKGT----ITTRLLVPSSKVGCILGQGGQVINEMRRRTQA 426
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
IR+ + + PK A EDEE+VQI+G VA AL+++ RLR T A A PV P
Sbjct: 427 DIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVNAGAEPGPVGP 486
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/476 (35%), Positives = 273/476 (57%), Gaps = 69/476 (14%)
Query: 7 INYGKRTHFQSDAATNGGS---KRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGK 61
++YGK S T S KR+ + + SE +T+YR LCP++KIGS++G+
Sbjct: 1 MDYGKSRRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGR 60
Query: 62 GGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--------VSP- 112
GG++VK LR ETK+ IR+++ +PG DER++ I++ L +++ E + P
Sbjct: 61 GGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPH 120
Query: 113 --AQDALFRVHDRIVAE---DSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNI 166
AQDAL ++HD+IVA+ D +A +E E +T R+LV +Q+GC++GKGG +IQ +
Sbjct: 121 CFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQL 180
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL-- 224
R++T A IR+L E LP CAL DEL+Q++G P++VRKAL +I++RLH++P + L
Sbjct: 181 RSDTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEE 240
Query: 225 -LSSSSNIYQSSGVYLS----------------APLVGSYGN---YSARRDEASAREFSL 264
+++S+ + S + L PL+ Y + Y E EFS+
Sbjct: 241 IINASTQRKRESPILLQHENPMLPHLHSDHPPPIPLLDPYRSGLQYHVTETE----EFSI 296
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFED 319
R++C + IG VIGK G +K++ Q++GA IKV D+SG + +I +S+KE +
Sbjct: 297 RILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASG----ESLIIVSSKEVPSE 352
Query: 320 P-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P SP I A + L + S +E+ +TR++VPS+++GC++G GG +I+EMR T A
Sbjct: 353 PISPAIEALILLHDKVSAPSEKRHS----STRLVVPSSKVGCILGEGGKVITEMRRRTGA 408
Query: 379 SIRILTNENVPKVAYEDEEMVQITGS---------LDVASSALSQVTLRLRANTFE 425
IR+ + + PK D+E+VQ G L A+ LS + LR+ ++ E
Sbjct: 409 EIRVYSKADKPKYLSFDDELVQTAGQIHGREDYRGLTSATGFLSTIELRIPNSSLE 464
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%), Gaps = 55/284 (19%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK-DEHLPLCALSFDELLQVAGEP 199
++R+L ++ IG VIGK G ++ + +T A+I++ + D+ +L +V EP
Sbjct: 294 FSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSEP 353
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+P+ +LL +SAP +
Sbjct: 354 I---------------SPAIEALILLHDK----------VSAP--------------SEK 374
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
R S RLV P+ +G ++G+GG +I ++R+ +GA I+V S D ++S F+D
Sbjct: 375 RHSSTRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKA----DKPKYLS----FDD 426
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+ A ++ R + + + T + +P++ + ++G GG ++E+R + A
Sbjct: 427 E--LVQTAGQIHGREDYRGLTSATGFLSTIELRIPNSSLESIVGVGGVNLAEIRQISGAR 484
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
+R+ A E +V+I G+L+ A +A S + + AN+
Sbjct: 485 LRLHEAH-----AGSSESVVEIQGTLEEAKAAQSLLQGFISANS 523
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 186/441 (42%), Positives = 263/441 (59%), Gaps = 56/441 (12%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS-- 97
G DTVYR LCP RKIG +IGKGG IVK LR ET+S I ++++V G DER++ IYSSS
Sbjct: 40 GDGDTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDK 99
Query: 98 --------EGTNLFEDSGEFVSP---AQDALFRVHDRIVAED---SLADDEFGELTLITV 143
EG E P AQDAL +VHDRIV ED +A D+ + ++T
Sbjct: 100 PPRKMDGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTA 159
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R+LVP + +GCV+GK G VIQ +R+ET A IR+L +HLP CA+ DEL+Q++G+PAV +
Sbjct: 160 RLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAK 219
Query: 204 KALVQIASRLHENP-------------SRSQHLLLSSSSNIYQSSGVYL--------SAP 242
+AL +I+ LH+NP R+ H S +N+ S P
Sbjct: 220 RALYEISILLHQNPRKDKLPSVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHSMP 279
Query: 243 LVGSYGNYSARR-------------DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+G YGN+ + E SA EFS++++C G IGGVIGKGG +K ++Q
Sbjct: 280 WMGEYGNHPSEFGPGGFNGVPPGHGREPSA-EFSMKILCSTGKIGGVIGKGGSNVKIVQQ 338
Query: 290 ESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVIT 348
E+GASI V+ + AE ++ I +S E +P S TI A L+LQ + S+ +E+ +I
Sbjct: 339 ETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKG----MII 394
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
TR+LVPS+++GC++G+GG +I+EMR +A IR+ + PK A +DEE+VQI+G+ VA
Sbjct: 395 TRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVA 454
Query: 409 SSALSQVTLRLRANTFEREGA 429
AL+++ RLRA T A
Sbjct: 455 KDALAEIASRLRARTLRDANA 475
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 261/440 (59%), Gaps = 57/440 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
N KRTH SD +G KR N + +T+YR LCP++KIGS++G+GG+IVK
Sbjct: 10 NSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVK 66
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE---------FVSP--AQDA 116
LR ETK+ IR+++++PG DER++ I++ +++ E F S AQDA
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDA 126
Query: 117 LFRVHDRIVAE---DSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
L ++HD+IV++ D +A+DE E +T R+LV +Q+GC++GKGG +IQ +R+ T A
Sbjct: 127 LLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGA 186
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSSS 228
IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S+
Sbjct: 187 GIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIIDAST 246
Query: 229 SNIYQSSGV--------YLSA------PLVGSY---GNYSARRDEASAREFSLRLVCPAG 271
+S + +L + PL+ Y Y E EFS+R++C +
Sbjct: 247 QRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPYRSGPQYPVTETE----EFSIRILCASE 302
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTIT 325
IG VIGK G ++++ Q++GA IKV D+SG + +I IS+ E +P SP I
Sbjct: 303 LIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIISSNEIPAEPISPAIE 358
Query: 326 AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
A + L + S +E+ +TR++VPS+++GC+IG GG +I++MR T A IR+ +
Sbjct: 359 ALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSK 414
Query: 386 ENVPKVAYEDEEMVQITGSL 405
+ PK D+E+VQ G +
Sbjct: 415 ADKPKYLSFDDELVQAAGQI 434
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 33/188 (17%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTI 324
R++CP IG V+G+GG I+K +R+E+ A I+V S D+ +I I + +P PT
Sbjct: 46 RILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN--YQNEPEPTD 103
Query: 325 TAA---------------------LRLQPR---------CSEKTERESGDPVITTRILVP 354
AA L++ + + + ES D V T RILV
Sbjct: 104 EAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDV-TARILVQ 162
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
Q+GCL+G+GG+II ++RS T A IR+L +EN+P+ A + +E+VQI+G+ + AL +
Sbjct: 163 GNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYE 222
Query: 415 VTLRLRAN 422
++ RL +
Sbjct: 223 ISTRLHQH 230
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 190/450 (42%), Gaps = 103/450 (22%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVT 92
+++ ++D R L ++G ++GKGG I++QLRS T + IR+ SE +P C +
Sbjct: 146 DEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDE 205
Query: 93 IYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE----------------------DSL 130
+ S +L + +S R +R + E L
Sbjct: 206 LVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIIDASTQRKRESPTLQHEYSMLPHL 265
Query: 131 ADDEFGELTLI-----------------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
D + L+ ++R+L ++ IG VIGK G ++ + +T A+
Sbjct: 266 HSDHTPPIPLLDPYRSGPQYPVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGAR 325
Query: 174 IRILKDEHLP----LCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
I++ + + L +S +E+ PA+ +AL+ + ++ PS H
Sbjct: 326 IKVQEIDKDASGERLIIISSNEIPAEPISPAI--EALILLHDKV-SAPSEKHH------- 375
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
S RLV P+ +G +IG+GG +I +R+
Sbjct: 376 --------------------------------SSTRLVVPSSKVGCIIGEGGKVITDMRR 403
Query: 290 ESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCS-EKTERESGDPVIT 348
+GA I+V S D ++S F+D + AA ++ R + +G + T
Sbjct: 404 RTGAEIRVYSKA----DKPKYLS----FDDE--LVQAAGQIHGREDYREPTSATGRFLST 453
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+ +P++ +G ++G GG ++E+R + A +R+ A E +V+I G+LD A
Sbjct: 454 IELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQA 508
Query: 409 SSALSQVTLRLRANTFEREGALAAHPPVLP 438
+A S + + AN+ +++ ++ P+ P
Sbjct: 509 KAAQSLLQGFISANSRQQQQPYSSRMPLYP 538
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 27/190 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + P K+G IIG+GG+++ +R T + IR+ YS ++
Sbjct: 379 RLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRV--------------YSKADKPKYLSFD 424
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
E V A ++H R ED L T+ + +P +G ++G GG + I
Sbjct: 425 DELVQ----AAGQIHGR---EDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGVNLAEI 477
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R + A++R L + H A S + ++++ G + A + + N SR Q S
Sbjct: 478 RQVSGARLR-LHEAH----AGSSESVVEIQGTLDQAKAAQSLLQGFISAN-SRQQQQPYS 531
Query: 227 SSSNIYQSSG 236
S +Y S G
Sbjct: 532 SRMPLYPSWG 541
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 258/437 (59%), Gaps = 54/437 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEI 65
N KR H SD KR+ + + SE +T+YR LCP +KIGS++G+GG+I
Sbjct: 10 NSKKRRHSNSDDG-----KRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDI 64
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--------VSP---AQ 114
VK LR ETK+ IR+++++PG DER++ I++ L +++ E + P AQ
Sbjct: 65 VKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQ 124
Query: 115 DALFRVHDRIVAE---DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
DAL ++HD+IVA+ D +A DE + +T R+LV +Q+GC++GKGG +IQ +R++T
Sbjct: 125 DALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLLGKGGSIIQQLRSDTG 182
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSS 227
A IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S
Sbjct: 183 AGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDE-------------ASAREFSLRLVCPAGNIG 274
+ ++S + P++ ++ + EFS+R++C + IG
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIRILCASELIG 302
Query: 275 GVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTITAAL 328
VIGK G ++++ Q++GA IKV D+SG + +I +S+ E +P SPTI A +
Sbjct: 303 SVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIVSSNEIPTEPISPTIEALI 358
Query: 329 RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
L + S +E+ +TR++VPS ++GC++G GG +I+EMR T A IR+ + +
Sbjct: 359 LLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK 414
Query: 389 PKVAYEDEEMVQITGSL 405
PK +E+VQ G +
Sbjct: 415 PKYLSFGDELVQAAGQI 431
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 245 GSYGNYSARRDEASAR----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
G S+R D+ S E R++CPA IG V+G+GG I+K +R+E+ A I+V S
Sbjct: 22 GKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADS 81
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALR--------LQPRC------------------ 334
D+ +I I + P T AA + ++P C
Sbjct: 82 IPGADERVIIIFN--YQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEI 139
Query: 335 -SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
E ES D V T RILV Q+GCL+G+GG+II ++RS T A IR+L++EN+P+ A
Sbjct: 140 YDEVAHDESSDDV-TARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCAL 198
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRAN 422
+ +E+VQI+G+ + AL +++ RL +
Sbjct: 199 QSDELVQISGAPSLVRKALYEISTRLHQH 227
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 76/311 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP----LCALSFDELLQVA 196
++R+L ++ IG VIGK G ++ + +T A+I++ + + L +S +E+
Sbjct: 290 FSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEP 349
Query: 197 GEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE 256
P + +AL+ + H +S+SS + SS
Sbjct: 350 ISPTI--EALILL------------HDKVSASSEKHHSS--------------------- 374
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE------GDDCIIF 310
RLV P+ +G ++G+GG +I ++R+ +GA I+V S + GD+ +
Sbjct: 375 -------TRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQA 427
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
ED +A+ R T + +P++ + ++G GG ++
Sbjct: 428 AGQIHGLEDYRGLPSASGRFSS---------------TIELRIPNSSLESIVGVGGVNLA 472
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
E+R + A +R+ A E +V+I G+LD A +A S + + AN+ +++
Sbjct: 473 EIRQISGARLRLHEAH-----AGSSESVVEIQGTLDQAKAAQSLLEGFISANSRQQQ--- 524
Query: 431 AAHPPVLPYVP 441
+H +P P
Sbjct: 525 -SHSSRMPLYP 534
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 257/434 (59%), Gaps = 54/434 (12%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE--DTVYRYLCPLRKIGSIIGKGGEI 65
N KR H SD KR+ + + SE +T+YR LCP +KIGS++G+GG+I
Sbjct: 10 NSKKRRHSNSD-----DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDI 64
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--------VSP---AQ 114
VK LR ETK+ IR+++++PG DER++ I++ L +++ E + P AQ
Sbjct: 65 VKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQ 124
Query: 115 DALFRVHDRIVAE---DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
DAL ++HD+IVA+ D +A DE + +T R+LV +Q+GC++GKGG +IQ +R++T
Sbjct: 125 DALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLLGKGGSIIQQLRSDTG 182
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----QHLLLSS 227
A IR+L E+LP CAL DEL+Q++G P++VRKAL +I++RLH++P + + ++ +S
Sbjct: 183 AGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIIDAS 242
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDE-------------ASAREFSLRLVCPAGNIG 274
+ ++S + P++ ++ + EFS+R++C + IG
Sbjct: 243 TQRKHESPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIRILCASELIG 302
Query: 275 GVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFFEDP-SPTITAAL 328
VIGK G ++++ Q++GA IKV D+SG +I +S+ E +P SPTI A +
Sbjct: 303 SVIGKSGANVRRVEQQTGARIKVQEIDKDASGER----LIIVSSNEIPTEPISPTIEALI 358
Query: 329 RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
L + S +E+ +TR++VPS ++GC++G GG +I+EMR T A IR+ + +
Sbjct: 359 LLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADK 414
Query: 389 PKVAYEDEEMVQIT 402
PK +E+VQ+T
Sbjct: 415 PKYLSFGDELVQVT 428
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 34/206 (16%)
Query: 245 GSYGNYSARRDEASAR----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
G S+R D+ S E R++CPA IG V+G+GG I+K +R+E+ A I+V S
Sbjct: 22 GKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADS 81
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALR--------LQPRC------------------ 334
D+ +I I + P T AA + ++P C
Sbjct: 82 IPGADERVIIIFN--YQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEI 139
Query: 335 -SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
E ES D V T RILV Q+GCL+G+GG+II ++RS T A IR+L++EN+P+ A
Sbjct: 140 YDEVAHDESSDDV-TARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCAL 198
Query: 394 EDEEMVQITGSLDVASSALSQVTLRL 419
+ +E+VQI+G+ + AL +++ RL
Sbjct: 199 QSDELVQISGAPSLVRKALYEISTRL 224
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 252/499 (50%), Gaps = 75/499 (15%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
+ +A NG KRR G+ V+R LC +IG +IGKGG I+ Q+R ET
Sbjct: 6 RPNAGPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGV 65
Query: 76 NIRISETVPGCDERIVTIYSS----------------------SEGTNLFE-DSGE---- 108
+RI E VPGCDER++TI S SEG + E D G+
Sbjct: 66 KLRIEEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNED 125
Query: 109 ----FVSPAQD------------ALFRVHDRIVA---EDSLADDEFGELTLITVRMLVPA 149
P +D A+ V +R+V E + D+E + + +R+L+
Sbjct: 126 KREKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSFFLRLLILT 185
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
Q+GCV+GKGG VI+ + E+ AQIRIL + LP CA + DE++Q++G VVRKAL +
Sbjct: 186 AQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQSV 245
Query: 210 ASRLHENPSRSQHLLLSSS--------------------------SNIYQSSGVYLSAPL 243
+ +L ENP R L + S S + S + +APL
Sbjct: 246 SQQLLENPPRDHDSLSAKSTGPSSHSFGQFPPHNRSFSAQGEPFASGPHDISAFHSAAPL 305
Query: 244 VGSYGNYSAR-RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
+ + + R + RL+CPA +G +IGKGG IIK ++QE+ + IKV +
Sbjct: 306 IPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPP 365
Query: 303 EGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCL 361
+ +DC+I IS ED SP A R+Q R + K ++ D ++ R LV S QIGCL
Sbjct: 366 DSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIA-KPIPDAKDHIMLARFLVSSTQIGCL 424
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
+G+GG+II+EMR + A IRIL + VPK A EDEE++Q+ G ++ AL Q+T RL+
Sbjct: 425 LGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKH 484
Query: 422 NTFEREGALAAHPPVLPYV 440
+ F +P P++
Sbjct: 485 HCFRDSYPSVNYPSNSPFL 503
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/501 (33%), Positives = 251/501 (50%), Gaps = 77/501 (15%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
+ +A NG KRR + V+R LC +IGS+IGKGG I+ Q+R ET
Sbjct: 6 RPNAGPNGRGKRRKSSGGFSPLDVSPGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGV 65
Query: 76 NIRISETVPGCDERIVTIYSS----------------------SEGTNLFEDSG------ 107
++I E VPGCDER++TI S SEG + E +G
Sbjct: 66 KVKIEEAVPGCDERVITISGSDKEAEEYTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGN 125
Query: 108 -----EFVSPAQD------------ALFRVHDRIVA---EDSLADDEFGELTLITVRMLV 147
+ P +D A+ V +R+V E + D+E + + +R+L+
Sbjct: 126 EDKEEKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKSSSFFLRLLI 185
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
Q+GCV+GKGG VI+ + E+ AQIRIL + +P+CA +FDE++Q++G VVRKAL
Sbjct: 186 LTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKVPVCASAFDEIVQISGSVEVVRKALQ 245
Query: 208 QIASRLHENPSRSQHLLLSSSSNI--------------------------YQSSGVYLSA 241
++ +L ENP R L + S+ + S + +
Sbjct: 246 SVSQQLLENPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQGEPFATGPHDISAFHSAP 305
Query: 242 PLVGSYGNYSAR-RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
PL+ + + R + RL+CP +G +IGKGG IIK ++QE+ + IKV +
Sbjct: 306 PLIPKFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEA 365
Query: 301 GAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIG 359
+ +DC+I IS ED SP A R+Q R + K ++ D + R LV S QIG
Sbjct: 366 PPDSEDCVIVISGPAHPEDRVSPVQEAVFRVQTRIA-KPIPDANDHTMLARFLVSSNQIG 424
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
CL+G+GG+II+EMR + A IRIL + VPK A EDEE++Q+ G ++ AL Q+T RL
Sbjct: 425 CLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRL 484
Query: 420 RANTFEREGALAAHPPVLPYV 440
+ + F +P P++
Sbjct: 485 KHHFFRDSYPSVNYPSNSPFL 505
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 171/432 (39%), Positives = 245/432 (56%), Gaps = 64/432 (14%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGG-SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSII 59
MAG + GKRT + D A N +KRRN G EQ G++ TVYR LCP IGS+I
Sbjct: 1 MAG---LYSGKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVI 57
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS------SEGTNLFEDSGEFVSPA 113
GKGG+++K +R ET+S IR+++ VPG DER++ I+SS + + ++ E V PA
Sbjct: 58 GKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPA 117
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
QD L RVH IV E S D++ + R+LV QIG +IGKGG IQ +R+E+ AQ
Sbjct: 118 QDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQ 177
Query: 174 IRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ----HLLLSSSS 229
I+I + + LP CA SFDEL+ ++G+ A V+KAL +++ L ++P + Q +L ++
Sbjct: 178 IQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQ 237
Query: 230 NIYQSSGV-------------------YLSAPLVG------------------------- 245
+ SGV LSAP++G
Sbjct: 238 SSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPA 297
Query: 246 --SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
S+ + + ++ EFS+R++CP IGGVIGKGG IK +R ++GASI+V+ + E
Sbjct: 298 LPSFSKFGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTE 357
Query: 304 GDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
D+ +I +S E +D SPTI A L LQ + S T++ D I+TR LVPS IGCL+
Sbjct: 358 SDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTTDK---DGAISTRFLVPSKHIGCLL 414
Query: 363 GRGGAIISEMRS 374
G+GG IISEMR+
Sbjct: 415 GKGGNIISEMRA 426
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 50/273 (18%)
Query: 253 RRDEASAREFSL--------RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
RR+ + RE ++ R++CP+ IG VIGKGG +IK +RQE+ + I+V +
Sbjct: 25 RRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGV 84
Query: 305 DDCIIFISTKEFFEDP-------------------SPTITAALRLQPRCSEKTERESGDP 345
D+ +I I F P P LR+ +++ + D
Sbjct: 85 DERVIVI-----FSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDA 139
Query: 346 ----VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
R+LV ++QIG LIG+GG I ++RS + A I+I + +P A+ +E+V I
Sbjct: 140 DKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVI 199
Query: 402 TGSLDVASSALSQVTLRLRANTFER---------EGALAAHPPV-LPYVPMSLDITDG-S 450
+G AL V+ L + + E ++ PP +P P + + G S
Sbjct: 200 SGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDS 259
Query: 451 KYGNRDNQSRGRGNSYATGNLPGRDSYGSYGGS 483
+G+ + + G YA+ LPG YGS GS
Sbjct: 260 LFGHHNLSAPILG--YAS-RLPGLGGYGSEAGS 289
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 14/130 (10%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ R LCP KIG +IGKGG +K +R++T ++IR+ + DER++ + T
Sbjct: 313 SEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV----SAT 368
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
L +D VSP +A+ + + S D+ G I+ R LVP+ IGC++GKGG
Sbjct: 369 ELADDR---VSPTIEAVLLLQGKT----SGTTDKDGA---ISTRFLVPSKHIGCLLGKGG 418
Query: 161 QVIQNIRTET 170
+I +R +
Sbjct: 419 NIISEMRANS 428
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/442 (35%), Positives = 233/442 (52%), Gaps = 57/442 (12%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G ++R LCP K G +IGKGG I++Q R +T + IRI ++V GCDER++ I + +
Sbjct: 50 GAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADA 109
Query: 98 -------------------EGTNLFEDSGEFV-------SPAQDALFRVHDRIVAEDSLA 131
E NL S V SPAQ AL RV +RI+ D
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEER 169
Query: 132 DDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+++ + L + R+L P++Q+GCV+G+GG++++ IR E+ AQIR+L +H+P CA
Sbjct: 170 EEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACAS 229
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENP--SRSQHLLLSSSSNIYQSSGV-------- 237
DEL+Q+ G VRKAL+ ++S L +NP + + + +G+
Sbjct: 230 PGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFP 289
Query: 238 ------YLSAPLVGSYG--------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
L P S G N A E +L+C +G +IGKGG I
Sbjct: 290 QRGYGSSLHGPDYHSRGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSI 349
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERES 342
I+ ++ E+GASIK+ + + D+ ++ IS +E E SP A +R+ R +E E
Sbjct: 350 IRFLQSETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAVIRVHCRIAE-IGFEP 408
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G V+ R+LV S QIGCL+G+GG IISEMR AT ASIRI E VPK +++E+VQ+
Sbjct: 409 GAAVV-ARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVI 467
Query: 403 GSLDVASSALSQVTLRLRANTF 424
GSL AL ++T R+R F
Sbjct: 468 GSLQSVQDALFRITSRIRETIF 489
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 131/249 (52%), Gaps = 30/249 (12%)
Query: 30 PGDE---TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
PG E R + E+ V++ LC K+GS+IGKGG I++ L+SET ++I+I++ P
Sbjct: 311 PGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDS 370
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
DER+V I S NL + SPAQDA+ RVH RI A+ F + R+L
Sbjct: 371 DERVVVI---SARENLEQKH----SPAQDAVIRVHCRI------AEIGFEPGAAVVARLL 417
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
V + QIGC++GKGG +I +R T A IRI E +P C DEL+QV G V+ AL
Sbjct: 418 VHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDAL 477
Query: 207 VQIASRLHENPSRSQHLLLSSSSNI----YQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+I SR+ E + L S SN+ Y SS + P+ + R D AS +
Sbjct: 478 FRITSRIRE----TIFPLKPSISNVNGPPYMSSFPEIPPPM------FRPRHDPASPGHY 527
Query: 263 SLRLVCPAG 271
S + P G
Sbjct: 528 SSPVGVPHG 536
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 244/453 (53%), Gaps = 83/453 (18%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS-SSEG----- 99
+R LCP +IGS+IGKGG I+K LR +T + I+I++ +PG DER++ I + +EG
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 100 -------------------TNLFEDSGEFVSPAQDALFRVHDRIVA----EDSLADDEFG 136
+ + + + PAQ ALF+VH RI+ ED L D +
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 137 ELTL---ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E L + RMLVP +Q+GC++GK G++I+ +R ET +QIRIL E LP+CAL DE++
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY----QSSGVYLSAPLVGSYGN 249
QV G+ V++AL I++RL +NP + + S S + +SSG S P + + +
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHTS 301
Query: 250 YSAR-RDEASAR--------------------------------EFSLRLVCPAGNIGGV 276
+ + R A R E R++CP+ IG +
Sbjct: 302 LAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNI 361
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRC- 334
IGK I+ +++E+GA I V + ++ +I +S E +D SP A +Q +
Sbjct: 362 IGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQDKLR 418
Query: 335 ---SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV 391
E +ER + TR+LVPS +GCL+G+GG IISEMR++TRA IR+L E +P
Sbjct: 419 DDGGETSER------VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLC 472
Query: 392 AYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
A +++E+VQ+ G + VA AL Q+T RLRAN +
Sbjct: 473 ALDNDEVVQVLGEIRVARDALVQITSRLRANLY 505
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 24/217 (11%)
Query: 12 RTHFQSDAATNGGSKRRNPGDETEQRGIG------SEDTVYRYLCPLRKIGSIIGKGGEI 65
R +SD+ NG R + G G E+ V+R LCP KIG+IIGK
Sbjct: 309 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 365
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
++ L+ ET + I + + VPGC+ER++ + + E + +SPAQ+A+F + D++
Sbjct: 366 IQTLQEETGAKINVPDAVPGCEERVIIVSA-------VESPDDDLSPAQEAVFHIQDKL- 417
Query: 126 AEDSLADDEFGELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
D+ GE + + R+LVP++ +GC++GKGG +I +R TRA IR+L E LPL
Sbjct: 418 ------RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPL 471
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
CAL DE++QV GE V R ALVQI SRL N R +
Sbjct: 472 CALDNDEVVQVLGEIRVARDALVQITSRLRANLYREK 508
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 111/323 (34%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGC----DERIVTIY 94
SE V R L P ++G ++GK G I++Q+R ET S IRI E +P C DE + +
Sbjct: 186 SEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVVQVVG 245
Query: 95 S--------SSEGTNLFED-------SGEFVS------------PAQDALFRVHDRIVAE 127
++ T L ++ S F S PA + H + +
Sbjct: 246 DRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHTSLAPQ 305
Query: 128 DSLADD---------------------EFGELTLITVRMLVPADQ------------IGC 154
L + EFG T R LVP D+ IG
Sbjct: 306 TRLRAEPRSDSGDNGYQLLRPTAPGLSEFG-----TGRHLVPMDEELVFRILCPSEKIGN 360
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+IGK IQ ++ ET A+I + + +P C R +V
Sbjct: 361 IIGK---FIQTLQEETGAKINV--PDAVPGCE---------------ERVIIVSAVESPD 400
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
++ S +Q + + G E S R + LV P+ ++G
Sbjct: 401 DDLSPAQEAVFHIQDKLRDDGG-------------------ETSERVVTRLLV-PSNHVG 440
Query: 275 GVIGKGGGIIKQIRQESGASIKV 297
++GKGG II ++R + A I+V
Sbjct: 441 CLLGKGGNIISEMRNSTRAIIRV 463
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/258 (54%), Positives = 177/258 (68%), Gaps = 16/258 (6%)
Query: 64 EIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR 123
EI+KQLR +TK IRI ETV C+E +VTIY+ S+ TN F+DS FVSP QDALFRVHD+
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDK 67
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
+V+E ++D F E + +TV++LV +DQIGCVIGKGGQ+IQNI +E+ AQI ILK++HL
Sbjct: 68 VVSEKVHSED-FEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLL 126
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL 243
CALSFDEL+Q++GE R L ++ +LH QHLL S Y S G L
Sbjct: 127 SCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYSSGG-----SL 177
Query: 244 VGSYGN-----YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
+G G+ YS RDEAS++EFSLRLVCP GN G+ GKG II QIR E A IKVD
Sbjct: 178 IGDSGDWSRSLYSVPRDEASSKEFSLRLVCPIGNTSGMFGKGSVIINQIRWEFRAIIKVD 237
Query: 299 S-SGAEGDDCIIFISTKE 315
S S AE DC++ IS K+
Sbjct: 238 STSVAEAYDCLVTISKKK 255
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 283 IIKQIRQESGASIKVDSSGAEGDDCII----FISTKEFFEDP----SPTITAALRLQPRC 334
IIKQ+R ++ I++D + + ++ ++ F F+D SPT A R+ +
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 335 -SEKTERESGDPV--ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV 391
SEK E + +T ++LV S QIGC+IG+GG II + S + A I IL N+++
Sbjct: 69 VSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSC 128
Query: 392 AYEDEEMVQITG 403
A +E+VQI+G
Sbjct: 129 ALSFDELVQISG 140
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 245/454 (53%), Gaps = 83/454 (18%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS-SSEG---- 99
++R LCP +IGS+IGKGG I+K LR +T + I+I++ +PG DER++ I + +EG
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 100 --------------------TNLFEDSGEFVSPAQDALFRVHDRIVA----EDSLADDEF 135
+ + + + PAQ ALF+VH RI+ ED L D +
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 136 GELTL---ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
E L + RMLVP +Q+GC++GK G++I+ +R ET +QIRIL E LP+CAL DE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY----QSSGVYLSAPLVGSYG 248
+QV G+ V++AL I++RL +NP + + S S + +SSG S P + +
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHT 240
Query: 249 NYSAR-RDEASAR--------------------------------EFSLRLVCPAGNIGG 275
+ + + R A R E R++CP+ IG
Sbjct: 241 SLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGN 300
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRC 334
+IGK I+ +++E+GA I V + ++ +I +S E +D SP A +Q +
Sbjct: 301 IIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQDKL 357
Query: 335 S----EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
E +ER + TR+LVPS +GCL+G+GG IISEMR++TRA IR+L E +P
Sbjct: 358 RDDGGETSER------VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPL 411
Query: 391 VAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
A +++E+VQ+ G + VA AL Q+T RLRAN +
Sbjct: 412 CALDNDEVVQVLGEIRVARDALVQITSRLRANLY 445
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 124/217 (57%), Gaps = 24/217 (11%)
Query: 12 RTHFQSDAATNGGSKRRNPGDETEQRGIG------SEDTVYRYLCPLRKIGSIIGKGGEI 65
R +SD+ NG R + G G E+ V+R LCP KIG+IIGK
Sbjct: 249 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 305
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
++ L+ ET + I + + VPGC+ER++ + + E + +SPAQ+A+F + D++
Sbjct: 306 IQTLQEETGAKINVPDAVPGCEERVIIVSA-------VESPDDDLSPAQEAVFHIQDKL- 357
Query: 126 AEDSLADDEFGELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
D+ GE + + R+LVP++ +GC++GKGG +I +R TRA IR+L E LPL
Sbjct: 358 ------RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPL 411
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
CAL DE++QV GE V R ALVQI SRL N R +
Sbjct: 412 CALDNDEVVQVLGEIRVARDALVQITSRLRANLYREK 448
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGC 86
SE V R L P ++G ++GK G I++Q+R ET S IRI E +P C
Sbjct: 126 SEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVC 173
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 169/506 (33%), Positives = 248/506 (49%), Gaps = 79/506 (15%)
Query: 11 KRTHFQSDAATNGGSKRRN-PGDETEQRGIGSED--TVYRYLCPLRKIGSIIGKGGEIVK 67
KR H TNG KR+N G + + + S V+R LCP KIG++ G+GG ++
Sbjct: 9 KRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVTGEGGAVIS 68
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL------------------------- 102
Q+R ET + + + E +PGCDE+I+ I S E T +
Sbjct: 69 QIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAEESDNKNDG 128
Query: 103 -----------FEDSGEF--VSPAQDALFRVHDRIVAEDSLAD---DEFGELTLITVRML 146
EDSG S Q AL V ++ D + D +E + + +R+L
Sbjct: 129 NEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMFEADPVTDGGDEENNKPSTFILRLL 188
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
V + Q+GC++GKGG VI+ + E+ AQIRI + LP+C+ DEL+++ GE VRKAL
Sbjct: 189 VLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRLPICSSVSDELVEITGEIDAVRKAL 248
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSY---GNYSARRDEASARE-- 261
++ +L ENP R H ++ + S S P +Y ++S R + R
Sbjct: 249 QSVSKQLLENPPRD-HDSFPANPSGTSSHSSGHSHPRPEAYLQRHSFSGRGKPYAVRSRD 307
Query: 262 ----------------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
+ RL+C +GGVIGKGG IIK ++QE+G IKV ++ +
Sbjct: 308 RHESVIQDQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSE 367
Query: 306 DCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
D +I IS +D S A +R+Q R + + + I R+LV S QIGCL+G+
Sbjct: 368 DRVIVISGLAHPDDRISAPQDAVIRVQTRIAMAISNK--EKAIIARLLVSSNQIGCLLGK 425
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
GGAI+SEMR ++ A IRIL + +P A E E +VQI G +V AL Q+T RLR + F
Sbjct: 426 GGAIMSEMRKSSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRLRHHFF 485
Query: 425 EREGALAAH----------PPVLPYV 440
+ H PP PY+
Sbjct: 486 QNLFPSMDHLSNPAFLDQVPPFPPYM 511
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/449 (36%), Positives = 251/449 (55%), Gaps = 96/449 (21%)
Query: 9 YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSE---DTVYRYLCPLRKIGSIIGKGGEI 65
+ KR + Q G K+ N + + ++ G+ DTVYR LCP RKIG +IGK G I
Sbjct: 9 FKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNI 68
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSS----SEGTNLFEDSG-----EFVSP---A 113
VK LR ET++ I +++T+PG +ER++ IYSS ++ N +DS E + P A
Sbjct: 69 VKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAA 128
Query: 114 QDALFRVHDRIVAED---SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
QDAL +VHDRI+ ED +A D+ E + IT R+LVP + +GC++GK G VIQ +R+ET
Sbjct: 129 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 188
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
A IR+L + LP CA++ DE++Q++G+P V ++AL ++ S+
Sbjct: 189 GANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV------------------STL 230
Query: 231 IYQ-----------------------------------------SSGVY--LSAPLVGSY 247
++Q +S ++ S P +G Y
Sbjct: 231 LHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGY 290
Query: 248 GNYSARRDEAS------------AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
G+ +R S + EFS++++C AG IGGVIGKGG +KQ++QE+GASI
Sbjct: 291 GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 350
Query: 296 KVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVP 354
V+ + + D+ +I S E +P S TI A L+LQ + SE +E+ + ITTR+LVP
Sbjct: 351 HVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT----ITTRLLVP 406
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRIL 383
S+++GC++G+GG +I+EMR T+A IR++
Sbjct: 407 SSKVGCILGQGGHVINEMRRRTQADIRVV 435
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 32/207 (15%)
Query: 248 GNYSARRDEAS-----AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-- 300
GN+S E S + R++CP+ IGGVIGK G I+K +R+E+ A I V +
Sbjct: 28 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 87
Query: 301 GAEGDDCIIF-----ISTKEFFEDPSPTITAALRLQPRCSEK------------------ 337
G+E II+ I+ + +D S T ++P C+ +
Sbjct: 88 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 147
Query: 338 --TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
++ ++ + IT R+LVP+ +GCL+G+ G +I +RS T A+IR+L + +P A
Sbjct: 148 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 207
Query: 396 EEMVQITGSLDVASSALSQVTLRLRAN 422
+EMVQI+G +VA AL +V+ L N
Sbjct: 208 DEMVQISGKPNVAKRALYEVSTLLHQN 234
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-------SETVPGCDERIVTIYSSSE 98
R L P K+G I+G+GG ++ ++R T+++IR+ + PG E IV I SSE
Sbjct: 402 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 460
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 249/473 (52%), Gaps = 67/473 (14%)
Query: 10 GKRTHFQSD-AATNGGSKRRNPGDETEQR-GIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
GKR + Q D N G KRR TEQ + E VYR LCP IGS+IGK G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRI----TEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVIN 59
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRVHD 122
+R ET++ I++ + PG +R++TI+ + E EF + AQDAL +VH
Sbjct: 60 SIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHA 119
Query: 123 RIVAEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDE 180
I + A D + + ++L+P+ Q VIGK G I+ +R++TR I+I KD
Sbjct: 120 AIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDA 179
Query: 181 HLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLS 226
P+ CA+ FD +AGEP VR+AL I+S +++ P R + ++++
Sbjct: 180 TDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIP 239
Query: 227 SSSNIYQSSGVYLSA----------PLVGS---------------YGNYSARRD------ 255
S +Y + G+Y SA P++G+ + YS+
Sbjct: 240 SDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGI 299
Query: 256 --EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ E +R++CP NIG VIGKGGG IK IRQ SGA ++VD + + D+CII IS+
Sbjct: 300 SGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS 359
Query: 314 KEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E +D S + L LQ EK + G VI R+L+PS IGC+IG+ G+II+E+
Sbjct: 360 FESLDDLKSMAVETVLLLQ----EKINDDEGGTVI-MRLLIPSKVIGCIIGKSGSIINEI 414
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
R +TRA IRI + + K A +E+V++TG + AL Q+ LRLR + +
Sbjct: 415 RKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALK 466
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE 303
G +YS++ SL ++ PA G VIGKGG I IR+ SGA I++ DS +
Sbjct: 538 GYMSSYSSKLYGGLPPPSSLEMLIPANAAGKVIGKGGANIANIRKISGALIEISDSKSSR 597
Query: 304 GDDCIIFISTKE 315
GD + T E
Sbjct: 598 GDRIALISGTSE 609
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 166/473 (35%), Positives = 249/473 (52%), Gaps = 67/473 (14%)
Query: 10 GKRTHFQSD-AATNGGSKRRNPGDETEQR-GIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
GKR + Q D N G KRR TEQ + E VYR LCP IGS+IGK G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRI----TEQDDWVSDELVVYRILCPDEVIGSVIGKSGKVIN 59
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRVHD 122
+R ET++ I++ + PG +R++TI+ + E EF + AQDAL +VH
Sbjct: 60 SIRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHA 119
Query: 123 RIVAEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDE 180
I + A D + + ++L+P+ Q VIGK G I+ +R++TR I+I KD
Sbjct: 120 AIANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDA 179
Query: 181 HLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLS 226
P+ CA+ FD +AGEP VR+AL I+S +++ P R + ++++
Sbjct: 180 TDPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIP 239
Query: 227 SSSNIYQSSGVYLSA----------PLVGS---------------YGNYSARRD------ 255
S +Y + G+Y SA P++G+ + YS+
Sbjct: 240 SDVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGI 299
Query: 256 --EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ E +R++CP NIG VIGKGGG IK IRQ SGA ++VD + + D+CII IS+
Sbjct: 300 SGHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS 359
Query: 314 KEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E +D S + L LQ EK + G VI R+L+PS IGC+IG+ G+II+E+
Sbjct: 360 FESLDDLKSMAVETVLLLQ----EKINDDEGGTVI-MRLLIPSKVIGCIIGKSGSIINEI 414
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
R +TRA IRI + + K A +E+V++TG + AL Q+ LRLR + +
Sbjct: 415 RKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALK 466
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 249/479 (51%), Gaps = 55/479 (11%)
Query: 6 NINYGKRTHFQSDAATNGGSKRRNPG---DETEQRGIGSEDTVYRYLCPLRKIGSIIGKG 62
++ KR++ +S +NG K + G + + I V+R LCP K GS+IGKG
Sbjct: 4 SLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKG 63
Query: 63 GEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL-----FEDSGEF---VSPAQ 114
G I+ Q+R ET +R+ ETV GCDER+V I S + T ED + +S Q
Sbjct: 64 GTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDDSQVEKGISSVQ 123
Query: 115 DALFRVHDRIV---AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
AL V +R+ +E + D++ + VR+LV + Q+GC++GKGG VI+ + E+
Sbjct: 124 KALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESG 183
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
AQIRIL + LPLCA DEL+Q+ GE ++AL I+ +L ENP R ++ S+N
Sbjct: 184 AQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIV---STNP 240
Query: 232 YQSSGVYLSAPLVGSYG----NYSARRD----EASARE---------------------- 261
SS PL S NYS A R+
Sbjct: 241 TGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGVRDTDYHSNTPQLHKFHESGMPGWM 300
Query: 262 -----FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
+ RL+C +GG+IGKGG IIK ++ E+G IKV + +D +IFIS
Sbjct: 301 KPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAH 360
Query: 317 FEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+D SP A LR+Q R +S + + R+LV S QIGCL+G+GGAII+EMR
Sbjct: 361 PDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKL 419
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
+ A IRIL + +PK A E+EE+VQI G + AL Q+T RLR + F R+ HP
Sbjct: 420 SGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHF-RDAFSVNHP 477
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 275/556 (49%), Gaps = 81/556 (14%)
Query: 10 GKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
GKR H Q D + ++R D + RG E VYR LCP IGS+IGK G+++ +
Sbjct: 5 GKRYHSQRDHDGDRKHQKRRMTDR-DDRG-NDELIVYRILCPDEVIGSVIGKNGKVINSI 62
Query: 70 RSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRVHDRI 124
R ET++ +++ + PG +R++TIY + E EF + AQDAL +VH I
Sbjct: 63 RQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKVHVAI 122
Query: 125 VAE-DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHL 182
++ D E ++LVP+ Q +IGK G I+ +R++TRA I++ KD
Sbjct: 123 ANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAAD 182
Query: 183 PL--CALSFDELLQVAGEPAVVRKALVQIASRLHEN------------PSRSQHLLLSSS 228
P CA+ FD + + GE V++AL ++S +++ P +++ S
Sbjct: 183 PTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSD 242
Query: 229 SNIYQSSGVY-LSAPLV------------------------GSYGNYSARRDEAS----- 258
+Y G+Y S P+V S+ YS+ S
Sbjct: 243 VPVYPPGGLYPASDPIVTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSGVGAS 302
Query: 259 -AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFF 317
+ E +R++CP+ IG VIGKGG IK +RQ SGA I+VD S A D+C+I I+T E
Sbjct: 303 RSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTTESP 362
Query: 318 ED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
D S + A L +Q + +++ D ++ R+LVPS IGC+IG+ G+II+E+R T
Sbjct: 363 SDLKSMAVEAVLLMQGKINDED-----DTTVSIRLLVPSKVIGCIIGKSGSIINEIRKRT 417
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-ERE-------G 428
+A +RI + PK A ++E+V++ GS+D AL Q+ LRLR + ER+ G
Sbjct: 418 KADVRISKGDK-PKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRERDTGHNPSIG 476
Query: 429 ALAAHP----PVLPYVPMSL-DITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGGS 483
A + +P LP + S+ + Y +R G G L YG Y GS
Sbjct: 477 AESLYPGSAGLSLPSMMHSVPPVAAPMVYDHRAESGAG------LGMLSPSSPYGGY-GS 529
Query: 484 LSGGGNAYGAYGDHSS 499
L G N YG+ +++
Sbjct: 530 LPMGDNGYGSMSSYAT 545
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 153/323 (47%), Gaps = 65/323 (20%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IGKGG +K +R + ++I + ++ DE ++ I ++
Sbjct: 304 SEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTT---- 359
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + S A +A+ + +I ED T +++R+LVP+ IGC+IGK G
Sbjct: 360 ---ESPSDLKSMAVEAVLLMQGKINDEDD---------TTVSIRLLVPSKVIGCIIGKSG 407
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE----- 215
+I IR T+A +RI K + P CA + DEL++V G VR AL+QI RL +
Sbjct: 408 SIINEIRKRTKADVRISKGDK-PKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRE 466
Query: 216 -----NPSRSQHLLLSSSSNIYQSSGVY----LSAPLV---------------------- 244
NPS L S+ + S ++ ++AP+V
Sbjct: 467 RDTGHNPSIGAESLYPGSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSPYGG 526
Query: 245 -----------GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
GS +Y+ + +L ++ PA +G V+GKGG I IR+ SGA
Sbjct: 527 YGSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGA 586
Query: 294 SIKV-DSSGAEGDDCIIFISTKE 315
SI++ D+ A GD + T E
Sbjct: 587 SIEISDNKSARGDRIALISGTPE 609
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/219 (54%), Positives = 156/219 (71%), Gaps = 22/219 (10%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+DT+YRYLCP +KIGSII +G +IVKQ R +TK I I +TV GC+E +VTIY+ S +N
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+F++S FVSP Q+ LFRVHDR+++ D + D+ F E A QIGCVIGKGGQ
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVIS-DEVHDENFEE-----------ASQIGCVIGKGGQ 397
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
+IQ+IR+E+ AQIRILKD+HLP LS D+L+Q++GEP++V KAL QIASRLH+NPS+SQ
Sbjct: 398 IIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQ 457
Query: 222 HLLLSSSSNIYQSSGVYLS----------APLVGSYGNY 250
HLL+ + Y S G + APLVG+YG Y
Sbjct: 458 HLLVXTMPTGYSSGGSLMGPTSSAPIMGLAPLVGTYGGY 496
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKE--FFEDP 320
R +CP IG +I +G I+KQ R ++ I + SG E I+ + E F++
Sbjct: 295 RYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESNVFDNS 354
Query: 321 ----SPTITAALRLQPRC-SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
SPT R+ R S++ E+ + ++QIGC+IG+GG II +RS
Sbjct: 355 NTFVSPTQNVLFRVHDRVISDEVHDENFEE---------ASQIGCVIGKGGQIIQSIRSE 405
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
+ A IRIL ++++P ++++QI+G + AL Q+ RL N + + L P
Sbjct: 406 SGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQHLLVXTMP 465
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 228 bits (580), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 252/469 (53%), Gaps = 76/469 (16%)
Query: 33 ETEQRGIGSED---TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
E+E++ I ++D VYR LCP +GS+IGK G+++ +R ET++ I++ + PGC ER
Sbjct: 30 ESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSER 89
Query: 90 IVTIYSS-SEGTNLFE------DSGEFVSPAQDALFRVHDRIV------AEDSLAD-DEF 135
++TI+ S SE ++ + D + AQ AL +VHD IV AE++ D D+F
Sbjct: 90 VITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDF 149
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLP--LCALSFDEL 192
E R+LVP+ Q VIGK G +I+NIR TRA ++++ KD P CA+ FD +
Sbjct: 150 RE-----CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNI 204
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSSSSNIYQSSGVYLS 240
+ ++GE V+KAL +++ +++ R Q +++ S +IY +G+Y S
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 241 -----------APLVGS----YGNYSARR----------------DEASAREFSLRLVCP 269
+ +G+ YG +A + + + +++++C
Sbjct: 265 QDSIFQHGANVSSFIGTLPQGYGENAANPLPVFSASALPVVHGFGGSSRSEKLAIKVICA 324
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED-PSPTITAA 327
+ IG VIGKGG IK IRQ SG+ I+V DS DDC+I ++ E +D S + A
Sbjct: 325 SSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAV 384
Query: 328 LRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
L LQ + +++ E + + ++LV S IGC+IG+ G+IISE+R T+A I I N
Sbjct: 385 LLLQEKINDEDEDK-----VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNN 439
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-EREGALAAHPP 435
PK A ++E+V+I+G + AL Q+ LRLR + +RE PP
Sbjct: 440 TPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPP 488
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 70/319 (21%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE + +C KIG +IGKGG +K +R + S+I ++++ D+ V +++E
Sbjct: 314 SEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESP 373
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + S A +A+ + ++I ED +D+ + +++LV + IGC+IGK G
Sbjct: 374 D------DLKSMAVEAVLLLQEKINDED---EDK------VKMQLLVSSKVIGCIIGKSG 418
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN---- 216
+I IR T+A I I K + P A DEL++++GE + VR AL+QI RL ++
Sbjct: 419 SIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRD 478
Query: 217 ---------PSRSQH--------------LLLSSSSNIYQSSGV-YLSAPLVGS------ 246
P+RS++ L S S++ Q + V + P GS
Sbjct: 479 RETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFDRRPETGSSMSMLP 538
Query: 247 -------YGNYSARRDEASA-------------REFSLRLVCPAGNIGGVIGKGGGIIKQ 286
YG++ + + ++ + PA +G V+G+GGG +
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 287 IRQESGASIKV-DSSGAEG 304
IR+ SGA I++ DS + G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 32/199 (16%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-------- 297
SY + + D R++CP+G +G VIGK G +I IRQE+ A IKV
Sbjct: 28 SYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCS 87
Query: 298 -----------------DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER 340
D +E D + S + I A+L +E T+
Sbjct: 88 ERVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASL---ATAAENTKI 144
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP---KVAYEDEE 397
+ D R+LVPS+Q +IG+ G+II +R TRA++++++ + A + +
Sbjct: 145 DRDD-FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDN 203
Query: 398 MVQITGSLDVASSALSQVT 416
+V I+G + AL V+
Sbjct: 204 IVMISGETESVKKALFAVS 222
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 253/469 (53%), Gaps = 76/469 (16%)
Query: 33 ETEQRGIGSED---TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
E+E++ I ++D VYR LCP +GS+IGK G+++ +R ET++ I++ + PGC ER
Sbjct: 30 ESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSER 89
Query: 90 IVTIYSS-SEGTNLFE------DSGEFVSPAQDALFRVHDRIV------AEDSLAD-DEF 135
++TI+ S SE ++ + D + AQ AL +VHD IV AE++ D D+F
Sbjct: 90 VITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDF 149
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLP--LCALSFDEL 192
E R+LVP+ Q VIGK G +I+NIR TRA ++++ KD P CA+ FD +
Sbjct: 150 RE-----CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSSSSNIYQSSGVYLS 240
+ ++GE V+KAL +++ +++ R Q +++ S +IY +G+Y S
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 241 -----------APLVGS----YGNYSARRD---EASA-------------REFSLRLVCP 269
+ +G+ YG +A ASA + +++++C
Sbjct: 265 QDSIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICS 324
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED-PSPTITAA 327
+ IG VIGKGG IK IRQ SG+ I+V DS DDC+I ++ E +D S + A
Sbjct: 325 SSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAV 384
Query: 328 LRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
L LQ + +++ E + + ++LV S IGC+IG+ G+IISE+R T+A I I N
Sbjct: 385 LLLQEKINDEDEDK-----VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNN 439
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-EREGALAAHPP 435
PK A ++E+V+I+G + AL Q+ LRLR + +RE PP
Sbjct: 440 TPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPP 488
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 70/319 (21%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE + +C KIG +IGKGG +K +R + S+I ++++ D+ V +++E
Sbjct: 314 SEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESP 373
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + S A +A+ + ++I ED +D+ + +++LV + IGC+IGK G
Sbjct: 374 D------DLKSMAVEAVLLLQEKINDED---EDK------VKMQLLVSSKVIGCIIGKSG 418
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN---- 216
+I IR T+A I I K + P CA DEL++++GE + VR AL+QI RL ++
Sbjct: 419 SIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRD 478
Query: 217 ---------PSRSQH--------------LLLSSSSNIYQSSGV-YLSAPLVGS------ 246
P+RS++ L S S++ Q + V + P GS
Sbjct: 479 RETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSMSMLP 538
Query: 247 -------YGNYSARRDEASA-------------REFSLRLVCPAGNIGGVIGKGGGIIKQ 286
YG++ + + ++ + PA +G V+G+GGG +
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 287 IRQESGASIKV-DSSGAEG 304
IR+ SGA I++ DS + G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-------- 297
SY + + D R++CP+G +G VIGK G +I IRQE+ A IKV
Sbjct: 28 SYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCS 87
Query: 298 -----------------DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER 340
D +E D + S + I A+L +E T+
Sbjct: 88 ERVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASL---ATAAENTKI 144
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE-NVPK--VAYEDEE 397
+ D R+LVPS+Q +IG+ G+II +R TRA++++++ + + P A + +
Sbjct: 145 DRDD-FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDN 203
Query: 398 MVQITGSLDVASSALSQVT 416
+V I+G + AL V+
Sbjct: 204 IVMISGETESVKKALFAVS 222
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 160/469 (34%), Positives = 253/469 (53%), Gaps = 76/469 (16%)
Query: 33 ETEQRGIGSED---TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
E+E++ I ++D VYR LCP +GS+IGK G+++ +R ET++ I++ + PGC ER
Sbjct: 30 ESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSER 89
Query: 90 IVTIYSS-SEGTNLFE------DSGEFVSPAQDALFRVHDRIV------AEDSLAD-DEF 135
++TI+ S SE ++ + D + AQ AL +VHD IV AE++ D D+F
Sbjct: 90 VITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDF 149
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLP--LCALSFDEL 192
E R+LVP+ Q VIGK G +I+NIR TRA ++++ KD P CA+ FD +
Sbjct: 150 RE-----CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNI 204
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSSSSNIYQSSGVYLS 240
+ ++GE V+KAL +++ +++ R Q +++ S +IY +G+Y S
Sbjct: 205 VMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPS 264
Query: 241 -----------APLVGS----YGNYSARR---DEASA-------------REFSLRLVCP 269
+ +G+ YG +A ASA + +++++C
Sbjct: 265 QDSIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEKLAIKVICS 324
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED-PSPTITAA 327
+ IG VIGKGG IK IRQ SG+ I+V DS DDC+I ++ E +D S + A
Sbjct: 325 SSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAV 384
Query: 328 LRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
L LQ + +++ E + + ++LV S IGC+IG+ G+IISE+R T+A I I N
Sbjct: 385 LLLQEKINDEDEDK-----VKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNN 439
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-EREGALAAHPP 435
PK A ++E+V+I+G + AL Q+ LRLR + +RE PP
Sbjct: 440 TPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQPP 488
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-------- 297
SY + + D R++CP+G +G VIGK G +I IRQE+ A IKV
Sbjct: 28 SYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCS 87
Query: 298 -----------------DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER 340
D +E D + S + I A+L +E T+
Sbjct: 88 ERVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASL---ATAAENTKI 144
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE-NVPK--VAYEDEE 397
+ D R+LVPS+Q +IG+ G+II +R TRA++++++ + + P A + +
Sbjct: 145 DRDD-FRECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDN 203
Query: 398 MVQITGSLDVASSALSQVT 416
+V I+G + AL V+
Sbjct: 204 IVMISGETESVKKALFAVS 222
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 249/463 (53%), Gaps = 65/463 (14%)
Query: 33 ETEQRGIGSED--TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
ETE++ +D VYR LCP +GS+IGK G+++ +R ET++ I++ + PGC ER+
Sbjct: 30 ETEEKTDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERV 89
Query: 91 VTIYSS-SEGTNLFE-DSGEF-----VSPAQDALFRVHDRIVAEDSLA--DDEFGELTLI 141
+TI+ S +E ++ + + E + AQDAL +VHD IVA + A + + +
Sbjct: 90 ITIFCSVTEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIR 149
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLP--LCALSFDELLQVAGE 198
R+LVP+ Q VIGK G +I+ IR+ TRA ++++ KD P CA+ FD ++ ++GE
Sbjct: 150 ECRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGE 209
Query: 199 PAVVRKALVQIASRLHENPSRSQ------------HLLLSSSSNIYQSSGVYLS------ 240
V+KAL +++ +++ R Q +++ S +IY G+Y +
Sbjct: 210 SESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQGGLYPNQDPIFQ 269
Query: 241 -----APLVGS----YGNYSARR----------------DEASAREFSLRLVCPAGNIGG 275
+ +G+ YG +A + + + ++++C + IG
Sbjct: 270 HGANVSSFIGTLPQGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKVICSSSKIGR 329
Query: 276 VIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPR 333
VIGKGG IK IRQ SG+ I+V DS DDC+I ++ E +D S + A L LQ +
Sbjct: 330 VIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVEAVLLLQEK 389
Query: 334 CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
+++ E + + ++LVPS IGC+IG+ G+IISE+R T+A+I I N PK A
Sbjct: 390 INDEDEEK-----VKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKPKCAD 444
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTF-EREGALAAHPP 435
++E+V+I+G + AL Q+ LRLR + +RE PP
Sbjct: 445 PNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPP 487
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 149/319 (46%), Gaps = 70/319 (21%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE V + +C KIG +IGKGG +K +R + S+I ++++ D+ V +++E
Sbjct: 313 SEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESP 372
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + S A +A+ + ++I ED + +++LVP+ IGC+IGK G
Sbjct: 373 D------DLKSMAVEAVLLLQEKINDEDE---------EKVKMQLLVPSKVIGCIIGKSG 417
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN---- 216
+I IR T+A I I K + P CA DEL++++GE + VR AL+QI RL ++
Sbjct: 418 SIISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRD 477
Query: 217 ---------PSRSQ--HLLLSSSSN--IYQSSGVYLSAPLVGS----------------- 246
P+RS+ + S SSN + S S P V S
Sbjct: 478 REIGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLP 537
Query: 247 -------YGNYSARRDEASA-------------REFSLRLVCPAGNIGGVIGKGGGIIKQ 286
YG++ + + + ++ + PA +G V+G+GGG +
Sbjct: 538 SSGGLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 597
Query: 287 IRQESGASIKV-DSSGAEG 304
IR+ SGA I++ DS + G
Sbjct: 598 IRRISGAMIEISDSKNSHG 616
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 247/477 (51%), Gaps = 77/477 (16%)
Query: 10 GKRTHFQSDA-ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
GKR Q D N KRR +E +++G E VYR LCP IGS+IGK G+++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRV--NERDEKG-SDELIVYRILCPDGVIGSVIGKSGKVINS 61
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRVHDR 123
+R +T++ I++ + PG +R++TIY + E EF + PAQDAL +VH
Sbjct: 62 IRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAA 121
Query: 124 IV-AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEH 181
IV A SL + + + ++LVP+ Q VIGK G I+ +R++TRA I+I KD
Sbjct: 122 IVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDST 181
Query: 182 LPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSS 227
P CA+ FD + +AG+ V+KAL I++ +++ R + +++ S
Sbjct: 182 DPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPS 241
Query: 228 SSNIYQSSGVYLSA--------------------------------------PLVGSYGN 249
IY + G Y SA P+V YG
Sbjct: 242 DVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYG- 300
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
A R E E +R++CP IG VIG+GG IK +R+ SGA ++VD + A+ D+C+I
Sbjct: 301 --ASRSE----ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLI 354
Query: 310 FISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
+++ E +D S + A L LQ + +++ D + R+LVPS IGC+IG+ G+I
Sbjct: 355 TVTSTESVDDLKSMAVEAVLLLQAKINDE-----DDDTVAIRLLVPSKIIGCIIGKSGSI 409
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I+E+R TRA +RI +E PK A ++E++++ G + AL Q+ LRLR + +
Sbjct: 410 INEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALK 465
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 153/335 (45%), Gaps = 77/335 (22%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IG+GG +K +R + +++ + +T DE ++T+ S+
Sbjct: 304 SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST---- 359
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + S A +A+ + +I ED DD + +R+LVP+ IGC+IGK G
Sbjct: 360 ---ESVDDLKSMAVEAVLLLQAKINDED---DDT------VAIRLLVPSKIIGCIIGKSG 407
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I IR TRA +RI K E P CA + DEL++V GE VR ALVQI RL ++ +
Sbjct: 408 SIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKD 466
Query: 221 Q---HLLLSSSSNIYQS------SGVYLSAPLV--------------------------- 244
+ H + + ++Y S V SAP V
Sbjct: 467 RDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYG 526
Query: 245 -----------------------GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
GS +YS++ + +V PA +G V+GKGG
Sbjct: 527 SLSLFFAVKVVVVFNGEVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGG 586
Query: 282 GIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKE 315
I IR+ SGA I++ DS + GD + T E
Sbjct: 587 ANIANIRKISGAVIEISDSKSSRGDRVALISGTPE 621
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 254 RDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI- 311
RDE + E + R++CP G IG VIGK G +I IRQ++ A IKV D +I I
Sbjct: 28 RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIY 87
Query: 312 ---------STKEFFEDPSPTITA--------ALRLQPRCSEKTERESGDPVITTRILVP 354
+ F D P A A + S + + +ILVP
Sbjct: 88 CYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVP 147
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVP---KVAYEDEEMVQITGSLDVASSA 411
S+Q +IG+ GA I +RS TRA+I+I ++ A E + V I G + A
Sbjct: 148 SSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKA 207
Query: 412 LSQVTLRLRANTFEREGALAAHPPVLP 438
L ++ + T E L P P
Sbjct: 208 LFAISAIMYKFTPREEIPLDTTVPEAP 234
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 247/477 (51%), Gaps = 77/477 (16%)
Query: 10 GKRTHFQSDA-ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
GKR Q D N KRR +E +++G E VYR LCP IGS+IGK G+++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRV--NERDEKG-SDELIVYRILCPDGVIGSVIGKSGKVINS 61
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRVHDR 123
+R +T++ I++ + PG +R++TIY + E EF + PAQDAL +VH
Sbjct: 62 IRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAA 121
Query: 124 IV-AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEH 181
IV A SL + + + ++LVP+ Q VIGK G I+ +R++TRA I+I KD
Sbjct: 122 IVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDST 181
Query: 182 LPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSS 227
P CA+ FD + +AG+ V+KAL I++ +++ R + +++ S
Sbjct: 182 DPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPS 241
Query: 228 SSNIYQSSGVYLSA--------------------------------------PLVGSYGN 249
IY + G Y SA P+V YG
Sbjct: 242 DVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYG- 300
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
A R E E +R++CP IG VIG+GG IK +R+ SGA ++VD + A+ D+C+I
Sbjct: 301 --ASRSE----ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLI 354
Query: 310 FISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
+++ E +D S + A L LQ + +++ D + R+LVPS IGC+IG+ G+I
Sbjct: 355 TVTSTESVDDLKSMAVEAVLLLQAKINDE-----DDDTVAIRLLVPSKIIGCIIGKSGSI 409
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I+E+R TRA +RI +E PK A ++E++++ G + AL Q+ LRLR + +
Sbjct: 410 INEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALK 465
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 63/321 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IG+GG +K +R + +++ + +T DE ++T+ S+
Sbjct: 304 SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST---- 359
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + S A +A+ + +I ED DD + +R+LVP+ IGC+IGK G
Sbjct: 360 ---ESVDDLKSMAVEAVLLLQAKINDED---DDT------VAIRLLVPSKIIGCIIGKSG 407
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I IR TRA +RI K E P CA + DEL++V GE VR ALVQI RL ++ +
Sbjct: 408 SIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKD 466
Query: 221 Q---HLLLSSSSNIYQS------SGVYLSAPLV--------------------------- 244
+ H + + ++Y S V SAP V
Sbjct: 467 RDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYG 526
Query: 245 ---------GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
GS +YS++ + +V PA +G V+GKGG I IR+ SGA I
Sbjct: 527 SLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVI 586
Query: 296 KV-DSSGAEGDDCIIFISTKE 315
++ DS + GD + T E
Sbjct: 587 EISDSKSSRGDRVALISGTPE 607
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 88/207 (42%), Gaps = 22/207 (10%)
Query: 254 RDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI- 311
RDE + E + R++CP G IG VIGK G +I IRQ++ A IKV D +I I
Sbjct: 28 RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIY 87
Query: 312 ---------STKEFFEDPSPTITA--------ALRLQPRCSEKTERESGDPVITTRILVP 354
+ F D P A A + S + + +ILVP
Sbjct: 88 CYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVASLENSDKKKKDKEECQILVP 147
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVP---KVAYEDEEMVQITGSLDVASSA 411
S+Q +IG+ GA I +RS TRA+I+I ++ A E + V I G + A
Sbjct: 148 SSQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKA 207
Query: 412 LSQVTLRLRANTFEREGALAAHPPVLP 438
L ++ + T E L P P
Sbjct: 208 LFAISAIMYKFTPREEIPLDTTVPEAP 234
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 177/508 (34%), Positives = 250/508 (49%), Gaps = 84/508 (16%)
Query: 6 NINYGKRTHFQSDAATNGGSKRRNPG---DETEQRGIGSEDTVYRYLCPLRKIGSIIGKG 62
++ KR++ +S +NG K + G + + I V+R LCP K GS+IGKG
Sbjct: 4 SLTPSKRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKG 63
Query: 63 GEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL-------------------- 102
G I+ Q+R ET +R+ ETV GCDER+V I S + T
Sbjct: 64 GTIISQIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSD 123
Query: 103 ---------------FEDSG--EFVSPAQDALFRVHDRIV---AEDSLADDEFGELTLIT 142
EDS + +S Q AL V +R+ +E + D++ +
Sbjct: 124 TKEPGENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFV 183
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
VR+LV + Q+GC++GKGG VI+ + E+ AQIRIL + LPLCA DEL+Q+ GE
Sbjct: 184 VRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDAC 243
Query: 203 RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYG----NYSARRD--- 255
++AL I+ +L ENP R ++ S+N SS PL S NYS
Sbjct: 244 KQALQSISQQLLENPPRDYDIV---STNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAP 300
Query: 256 -EASARE---------------------------FSLRLVCPAGNIGGVIGKGGGIIKQI 287
A R+ + RL+C +GG+IGKGG IIK +
Sbjct: 301 YAAGVRDTDYHSNTPQLHKFHESGMPGWMKPQDILTFRLLCHDERVGGIIGKGGTIIKNL 360
Query: 288 RQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPV 346
+ E+G IKV + +D +IFIS +D SP A LR+Q R +S +
Sbjct: 361 QNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKT 419
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+ R+LV S QIGCL+G+GGAII+EMR + A IRIL + +PK A E+EE+VQI G +
Sbjct: 420 VIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFE 479
Query: 407 VASSALSQVTLRLRANTFEREGALAAHP 434
AL Q+T RLR + F R+ HP
Sbjct: 480 AVQEALLQITTRLRHHHF-RDAFSVNHP 506
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 177/503 (35%), Positives = 248/503 (49%), Gaps = 84/503 (16%)
Query: 11 KRTHFQSDAATNGGSKRRNPG---DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
KR++ +S +NG K + G + + I V+R LCP K GS+IGKGG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL------------------------- 102
Q+R ET +R+ ETV GCDER+V I S + T
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 103 ----------FEDSG--EFVSPAQDALFRVHDRIV---AEDSLADDEFGELTLITVRMLV 147
EDS + +S Q AL V +R+ +E + D++ + VR+LV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
+ Q+GC++GKGG VI+ + E+ AQIRIL + LPLCA DEL+Q+ GE ++AL
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQ 248
Query: 208 QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYG----NYSARRD----EASA 259
I+ +L ENP R ++ S+N SS PL S NYS A
Sbjct: 249 SISQQLLENPPRDYDIV---STNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGV 305
Query: 260 RE---------------------------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
R+ + RL+C +GG+IGKGG IIK ++ E+G
Sbjct: 306 RDTDYHSNTPQLHKFHESGMPGXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETG 365
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRI 351
IKV + +D +IFIS +D SP A LR+Q R +S + + R+
Sbjct: 366 CEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARL 424
Query: 352 LVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
LV S QIGCL+G+GGAII+EMR + A IRIL + +PK A E+EE+VQI G + A
Sbjct: 425 LVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEA 484
Query: 412 LSQVTLRLRANTFEREGALAAHP 434
L Q+T RLR + F R+ HP
Sbjct: 485 LLQITTRLRHHHF-RDAFSVNHP 506
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 247/493 (50%), Gaps = 80/493 (16%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRG----IGSEDTVYRYLCPLRKIGSIIGKGGEIV 66
KR+ +S +NG K + +R + V+R L P+ +I S++G+ G+ +
Sbjct: 9 KRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRDGDGL 68
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF---------------EDSGEFVS 111
++R ET IR+ +T+PGCDERI I S++ T + E+ G+
Sbjct: 69 SKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAK 128
Query: 112 ----------PAQDA-------------LFRVHDRIVAEDSLADD---EFGELTLITVRM 145
P +DA LF V ++I E+ AD E +L +R+
Sbjct: 129 LKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRL 188
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
LV + Q+GC++GKGG V++ + +++ AQIRIL + LP + EL+Q++G VV+KA
Sbjct: 189 LVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISGGIDVVKKA 248
Query: 206 LVQIASRLHENPSRSQHLLLSSSS--------------------NIYQSSGVYLSAPL-V 244
L + +L ENP + + SS++ + + + G S P V
Sbjct: 249 LELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHGGPYSVPRDV 308
Query: 245 GSYGNYSAR------------RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
G++ + + R + S S RL+CP +G VIGKGG I+K ++Q++G
Sbjct: 309 GNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTG 368
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRI 351
IKV + +D II ++ +D SP A R+Q R K +S + + R
Sbjct: 369 CDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIV-KAAADSKEQNLVARF 427
Query: 352 LVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
LV S QIGCL+G+GG+II+EMR +T A IRIL E +PK A EDEE+VQI G + A
Sbjct: 428 LVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDA 487
Query: 412 LSQVTLRLRANTF 424
+ Q+T RLR + F
Sbjct: 488 MFQITTRLRHHFF 500
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 110/185 (59%), Gaps = 12/185 (6%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
YR LCP ++G++IGKGG IVK L+ +T +I++ + ++RI+ + + +
Sbjct: 340 YRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILVAGPAHPDDR--- 396
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+SP QDA+FRV RIV + AD + E L+ R LV ++QIGC++GKGG +I
Sbjct: 397 ----ISPVQDAVFRVQARIVK--AAADSK--EQNLVA-RFLVSSNQIGCLLGKGGSIIAE 447
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
+R T A IRIL E +P CA +E++Q+ GEP V+ A+ QI +RL + R +
Sbjct: 448 MRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDAMFQITTRLRHHFFRDAFPSV 507
Query: 226 SSSSN 230
+S SN
Sbjct: 508 NSHSN 512
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 247/480 (51%), Gaps = 77/480 (16%)
Query: 10 GKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
GKRT D G ++R P T++ E VYR LCP + IGS+IGK G+++ +
Sbjct: 5 GKRTSQHRDHDREGRDEKRRPAVHTQENSSNDELVVYRILCPDKVIGSVIGKNGKVINSI 64
Query: 70 RSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG--------EFVSPAQDALFRVH 121
R +T + +++ + PG D+R++ +Y +L E V AQ+AL +VH
Sbjct: 65 RQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNALLKVH 124
Query: 122 DRIV---AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL- 177
D IV A +S +DDE + LVPA Q VIGK G VI+ +R+ +++ I++
Sbjct: 125 DAIVEALAINSDSDDEEANI-------LVPASQAASVIGKSGSVIKRLRSISKSSIKVRP 177
Query: 178 KD--EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS------------QHL 223
KD E CA+SFD +Q+ G+ V+KAL +++ ++++PS+ +
Sbjct: 178 KDPSEVTHSCAMSFDNFVQITGDARAVKKALFAVSAIIYKSPSKEIIPLETSVQELPPSI 237
Query: 224 LLSSSSNIYQSSGVY-----------LSAPLVGSYGNYSARRD-----EASAR------- 260
++ S +Y +S Y S P++G+ + S + +A R
Sbjct: 238 IIPSELPVYPASNFYSLSDGAMPSGHPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSM 297
Query: 261 --------------EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ LR+VCP IG VIGKGG IK IR+ESGA+I VD + + ++
Sbjct: 298 VPAIPTYSTPKGSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREE 357
Query: 307 CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRG 365
II +++ E +D S + A L LQ + ++ E + R+LVP IGCLIG+G
Sbjct: 358 SIITVTSTEATDDVKSAAVEAVLLLQAKINDGIEDR-----MHIRLLVPGNVIGCLIGKG 412
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
G+I+++MR+ ++A I I + + P+ A +E+V++ G +D AL Q+ LRLR + +
Sbjct: 413 GSIVNDMRNKSKAIIHI-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLK 471
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/279 (48%), Positives = 178/279 (63%), Gaps = 35/279 (12%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG-CDERIVTIYSSSEGTNLFED 105
R +CP+R IG +I KGG + Q+R E+ + I++ T D+ +VTI L ++
Sbjct: 46 RLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTI--------LAKE 97
Query: 106 SGEFVSPAQDA----LFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
F Q + L+R+ R L D T TVR+LV +QIGCVIGKGGQ
Sbjct: 98 RLHFPRGPQTSHCIFLYRMCMR------LWDWNCPSGTF-TVRLLVSFNQIGCVIGKGGQ 150
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
+IQ+IR+E+ AQIRILKD+HLP C+LS +EL+Q++ EP++VRK L QIASRLH+NPSRSQ
Sbjct: 151 IIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQ 210
Query: 222 HLLLSSSSNIYQSSGVYL----SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
HL + Y SSG + AP++ DEAS++EFSL LVCP GNIGG+I
Sbjct: 211 HLFVYVVPIGYSSSGSLMGLTSGAPIM----------DEASSKEFSLCLVCPIGNIGGMI 260
Query: 278 GKGGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKE 315
GKG II QIRQE GA+IKVDS S E +DC++ IS KE
Sbjct: 261 GKGDVIINQIRQEFGATIKVDSTSVVEANDCLVTISAKE 299
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGN 272
+H +P+ LL +++ S V L P++ S+ + R FSLRLVCP N
Sbjct: 3 IHPDPNTCLFLLCPLDTHLVVHSWVQL--PVLQSWMRHIQR-------IFSLRLVCPIRN 53
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKEFFEDPS-PTITAALRL 330
IGGVI KGG I QIR+ESGA IKVDS S AE DDC++ I KE P P + + L
Sbjct: 54 IGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPRGPQTSHCIFL 113
Query: 331 QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
C + T R+LV QIGC+IG+GG II +RS + A IRIL ++++P
Sbjct: 114 YRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPS 173
Query: 391 VAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
+ E++QI+ + L Q+ RL N
Sbjct: 174 CSLSSNELIQISKEPSIVRKILYQIASRLHDN 205
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 235/443 (53%), Gaps = 42/443 (9%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
A NG SKR P G +R LC +IG +IGK G IVKQL+S+T + IR+
Sbjct: 29 APNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRV 86
Query: 80 SETVPGCDERIVTIYSSSEGTN--LFEDSGEFV--SPAQDALFRVHDRIVAEDSLADDEF 135
++ D R++ + + + + S E V S AQ+A+ RV +RI+ E + D
Sbjct: 87 EDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERIL-EVAAVVDGV 145
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
+++ R+L Q+G VIGKGG+V++ IR E+ ++I++L E LP CA S DE++++
Sbjct: 146 PPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEI 205
Query: 196 AGEPAVVRKALVQIASRLHENPSRS--------------QHLLLSSSSNIYQSSGVYL-- 239
G+ V+KALV ++ RL + P+ Q L +++Q G L
Sbjct: 206 EGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLPP 265
Query: 240 -----------SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
S PL + S + S +E +++C +GGVIGKGG I+K ++
Sbjct: 266 IPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIVKALQ 325
Query: 289 QESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEK-TER-----E 341
E+GASI V + AE D+ +I I+ E E SP + + R E E+
Sbjct: 326 NEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGS 385
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
G PV + R++VPS Q+GCL+G+GG IISEMR A+ A IRI+ ++ VPK A E++++VQI
Sbjct: 386 KGSPV-SARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQI 444
Query: 402 TGSLDVASSALSQVTLRLRANTF 424
+G L +T RLR N F
Sbjct: 445 SGEFVNVQDGLYHITGRLRDNLF 467
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 243/477 (50%), Gaps = 72/477 (15%)
Query: 10 GKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
GKRT D ++R P E G+ +E VYR LCP + IGS+IGKGG+++ +
Sbjct: 5 GKRTGQHRDHDREDRDQKRRPAHTQETSGM-AELVVYRILCPDKVIGSVIGKGGKVINSI 63
Query: 70 RSETKSNIRISETVPGCDERIVTIYSSSEGTNLF--------EDSGEFVSPAQDALFRVH 121
R +T + +++ + PG D+R++ +Y + ++ +D E V AQ+AL +VH
Sbjct: 64 RQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSDINADDDDDREPVCAAQNALLKVH 123
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D IV ++ DD + +LVPA Q VIGK G VI+ +R+ +++ I++ +
Sbjct: 124 DAIVGALAVTDDSDDK----EANILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKPKDP 179
Query: 182 LPL---CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLS 226
+ CA+SFD +Q+ G+ V+KAL +++ +++ PS+ ++L
Sbjct: 180 SDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELPPTIILP 239
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR-------------------------- 260
S +Y +S +Y + G+ S A++R
Sbjct: 240 SELPVYPASSLYSVSDASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSMVPA 299
Query: 261 -----------EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
E LR+VCP IG VIGK G IK IR+ESGA + VD + + ++ II
Sbjct: 300 VPTYNTPKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESII 359
Query: 310 FISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
+S+ E +D S + A L LQ + +++TE + R+LVP IGCLIG+GG+I
Sbjct: 360 TVSSTEATDDVKSAAVEAVLLLQAKINDETEDR-----MHLRLLVPGNVIGCLIGKGGSI 414
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I++MR+ ++A I I + P+ A +E+V++ G +D AL Q+ LRLR + +
Sbjct: 415 INDMRNKSKAIIHI-SKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVLK 470
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 275/575 (47%), Gaps = 100/575 (17%)
Query: 10 GKRTHFQSDAATNGGSKRRNPGDETEQRGIGSED-------TVYRYLCPLRKIGSIIGKG 62
GKR Q D G RN ++ ++R + D YR LCP IGS+IGK
Sbjct: 5 GKRNRQQRDGDRGG----RNWDNKNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKN 60
Query: 63 GEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG-----TNLFEDSGEFVSPAQDAL 117
G+++ +R E+++ +++ + PG R++TI+ + D+ + + AQDAL
Sbjct: 61 GKVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDAL 120
Query: 118 FRVHDRIVAE-DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
+VH I ++ D E ++LVP+ Q +IGK G I+ +R +TR I++
Sbjct: 121 IKVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKV 180
Query: 177 L-KDEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHEN------------PSRSQ 221
+ KD P CA+ FD + V GE V++AL +++ +++ P
Sbjct: 181 VPKDAADPEHSCAMEFDNFVLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPH 239
Query: 222 HLLLSSSSNIYQSSGVY-LSAPLV------------------GSYGN-------YSARRD 255
+++ S IY G+Y S P+V G Y + YS+
Sbjct: 240 SIIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLP 299
Query: 256 EASA------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
S+ E +R++CP+ IG +IGKGGG IK++RQ SGA I+VD S A D+C+I
Sbjct: 300 VVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLI 359
Query: 310 FISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
I+ E D S + A L LQ EK E PV + R+LVPS IGC+IGR GAI
Sbjct: 360 TITATESTSDLKSVAVEAVLLLQ----EKINDEDDAPV-SIRLLVPSKVIGCIIGRSGAI 414
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE- 427
I+E+R T+A I+I + N PK A +++E+V++ G +D AL Q+ LRLR + + +
Sbjct: 415 INEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNKD 473
Query: 428 ---------------GALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLP 472
++ + PP+L +P + Y R G G +++ +
Sbjct: 474 IDHNRHIGSESLYASSSVLSAPPMLSSIPAT---APALAYDQRTGSGTGLG-MHSSRSHY 529
Query: 473 GRDSYGSYGGSLSGGGNAYGAYGDHSSGRGLSGHR 507
G DSY S N YG+ +++ GHR
Sbjct: 530 GYDSY-------SMEDNGYGSMSSYATNL-YEGHR 556
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 154/320 (48%), Gaps = 65/320 (20%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IGKGG +K++R + + I + ++ DE ++TI ++
Sbjct: 309 SEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITAT---- 364
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + + S A +A+ + ++I ED +++R+LVP+ IGC+IG+ G
Sbjct: 365 ---ESTSDLKSVAVEAVLLLQEKINDEDDAP---------VSIRLLVPSKVIGCIIGRSG 412
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I IR T+A I+I + P A DEL++V GE VR AL+QI RL E+ ++
Sbjct: 413 AIINEIRKRTKADIQISRSNK-PKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKN 471
Query: 221 Q---HLLLSSSSNIYQSSGVYLSAPLVGS-------------------YGNYSARR---- 254
+ H S ++Y SS V + P++ S G +S+R
Sbjct: 472 KDIDHNRHIGSESLYASSSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGMHSSRSHYGY 531
Query: 255 DEASARE----------------------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
D S + +L +V PA +G V+GKGG + IR+ SG
Sbjct: 532 DSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVVPANAVGKVMGKGGANLANIRKISG 591
Query: 293 ASIKVDSSGAEGDDCIIFIS 312
A++++ S + D + IS
Sbjct: 592 ATVEISESKSYRGDRVALIS 611
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 161/512 (31%), Positives = 253/512 (49%), Gaps = 94/512 (18%)
Query: 7 INYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSED-TVYRYLCPLRKIGSIIGKGGEI 65
+ GKR+ Q D + +++R+ + +G +++ VYR LCP IGS+IGK G++
Sbjct: 2 VESGKRSRPQRDYDGDTNNQKRH----KDNKGTDNDELVVYRILCPDEVIGSVIGKSGKV 57
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRV 120
+ +R+E+++ +++ + PG R++TIY + + + +F + PAQDAL +V
Sbjct: 58 INSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLKV 117
Query: 121 HDRIV-AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
H I A +L D + ++LVP Q +IGK G I+ +R++TRA I+I K
Sbjct: 118 HAAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAK 177
Query: 179 DEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHEN------------PSRSQHLL 224
D P CA+ FD L + GE V+KAL +++ +++ P ++
Sbjct: 178 DASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSII 237
Query: 225 LSSSSNIYQSSGVYLSA--------------------------------------PLVGS 246
+SS IYQ G Y +A P+V S
Sbjct: 238 ISSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGYGDMRSSWPIYSSTVPVVPS 297
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+GN S E +RL+CP IG VIGKGG IK IRQ SGA I+VD + A+ D+
Sbjct: 298 FGN-------TSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDE 350
Query: 307 CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRG 365
CII + E +D S + A L LQ + ++ E D ++ R LVPS IGC+IG+
Sbjct: 351 CIITVIATESPDDLKSMAVEAILLLQGKIND----EDND-IVGIRFLVPSKVIGCIIGKS 405
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF- 424
GAI++E+R T A + I + + K A ++E+V++ G + AL Q+ LRLR +
Sbjct: 406 GAIVNEIRKRTNADVCISKVDKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLK 464
Query: 425 EREGALAAH---------------PPVLPYVP 441
E++G L + P +LP VP
Sbjct: 465 EKDGGLNSSVGTDSVYPVHAGISIPSILPSVP 496
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 151/319 (47%), Gaps = 65/319 (20%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
+ + R LCP KIG +IGKGG +K +R + + I + +T DE I+T+ ++
Sbjct: 305 ELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIAT------ 358
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E + S A +A+ + +I ED+ ++ +R LVP+ IGC+IGK G +
Sbjct: 359 -ESPDDLKSMAVEAILLLQGKINDEDN---------DIVGIRFLVPSKVIGCIIGKSGAI 408
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
+ IR T A + I K + L CA S DEL++VAGE VR ALVQI RL ++ + +
Sbjct: 409 VNEIRKRTNADVCISKVDKLK-CADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKD 467
Query: 223 LLLSSS---SNIYQSSG------VYLSAPLV----------------------------- 244
L+SS ++Y + S P V
Sbjct: 468 GGLNSSVGTDSVYPVHAGISIPSILPSVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSL 527
Query: 245 -------GSYGNYS-ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
GS +YS ++ E +L ++ PA +G VIGKGG I IR+ SGA I+
Sbjct: 528 PMGENSYGSLASYSLSKLYEGLPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIE 587
Query: 297 V-DSSGAEGDDCIIFISTK 314
+ D+ A GD I +IS K
Sbjct: 588 ISDAKSARGDR-IAYISGK 605
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 269/554 (48%), Gaps = 87/554 (15%)
Query: 21 TNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
+N KRR P + S V+R LCP KIG +IGKGG I+ Q+R ET ++I
Sbjct: 10 SNRRPKRRKPSGVFSPLDVSS-SVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIE 68
Query: 81 ETVPGCDERIVTIYSSSEGTNL-----FEDSGEFVSPAQDALFRVH-------DRIVAED 128
E VPGC+ER++T SE + D+ E S +D + + D + ED
Sbjct: 69 EPVPGCEERVITFLKESEEGSAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVED 128
Query: 129 S---------------------LADDEFGELT---LITVRMLVPADQIGCVIGKGGQVIQ 164
S +A+DE G+ + +R+L+ ++Q+GC++GKGG VI+
Sbjct: 129 SQSEKVNSNPTIMRAVMLVFERVAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIK 188
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
+ E+ AQIRIL E +P CA DEL+Q+ G VVR+AL + +L EN R L
Sbjct: 189 RMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDHESL 248
Query: 225 LSS----SSNIY---------------------QSSGVYLSAPLVGSYGNYSAR-RDEAS 258
++ SS+ Y V+ SAP++ + + R
Sbjct: 249 PTNLTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMRPP 308
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+ RL+CP+ ++G +IGKGG IIK ++QE+ + IKV + +DCII IS +
Sbjct: 309 PEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPD 368
Query: 319 DP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
D SP A R+Q R S + +S + + R++V S IGCL+G+GG+II+EMR+ +
Sbjct: 369 DRISPVQEAIFRVQNRIS-RAMLDSKEHSMLARVIVSSKHIGCLLGKGGSIIAEMRNLSG 427
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE----------RE 427
A IR+L + PK ED+E++Q++G ++ AL Q+T RLR N F
Sbjct: 428 AHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFRDAFPSANFPSNS 487
Query: 428 GALAAHPPVLPYV------PMSLDITDGSKYGNR----DNQSRGRGNSYATGNLPGRDSY 477
L H P PY+ P + G ++ + D+ N Y +G P
Sbjct: 488 AFLDQHSPFPPYLGRRGLSPPGMYSDLGPRHPHADFPLDDHPPFMNNMYRSGIPPLISER 547
Query: 478 GSYG--GSLSGGGN 489
+G G L GGG+
Sbjct: 548 KPWGPKGILEGGGH 561
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 261/530 (49%), Gaps = 98/530 (18%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
+YR LCP IGS+IGK G ++ +R +T + +++ + PG D+R++ +Y + +L
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 104 E--DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
D E V AQDAL RVH+ IV + + +LVPA Q VIGK G
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGA 160
Query: 162 VIQNIRTETRAQIRI-LKD--EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
VI+++R+ +RA I++ KD + CA+SFD +Q+ G V+KAL +++ ++++PS
Sbjct: 161 VIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPS 220
Query: 219 R------------SQHLLLSSSSNIYQSSGVYLSAP------------LVGSYGN----- 249
+ + +++ S +Y +S Y SAP ++GS +
Sbjct: 221 KENIPLETSIPEPTPSIIIPSELPVYPASNFY-SAPDAAIPSVHPSLSILGSTHHVPELA 279
Query: 250 ---------------------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
YSA + + E R++CP+G IG VIG+GG IK IR
Sbjct: 280 LPADDHGRLPIYPSILPVIPTYSAPK---CSGELEFRVLCPSGKIGLVIGRGGATIKNIR 336
Query: 289 QESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVI 347
QESGA I VD + + ++ II I++ E +D S + A L LQ + ++ D +
Sbjct: 337 QESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKINDYE-----DDRM 391
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
R+LVP+ IGCLIGRGG+I+++MR T+A+I +++ + P+ A +E+V+++G D
Sbjct: 392 NLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEADK 450
Query: 408 ASSALSQVTLRLRANTF---------EREGALA------------AHPPVLPYVPMSLDI 446
AL Q+ LRLR + +R+G L + P +LP+ P +
Sbjct: 451 LRDALVQIILRLREDVLKESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNPQIAPL 510
Query: 447 TDGSKYGNRDNQSRG-----RGNSYATGNLPGRDSYGSYGGSLSGGGNAY 491
+ Y R R R +SY ++ D YGG S AY
Sbjct: 511 S----YDRRGESERALEVFPRTSSYGYSSMQVTDD--GYGGLPSYTSKAY 554
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 148/316 (46%), Gaps = 67/316 (21%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LCP KIG +IG+GG +K +R E+ + I + + +E I+TI S+ E
Sbjct: 312 FRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITST-------EA 364
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+ S A +A+ + +I + DD + +R+LVP IGC+IG+GG ++ +
Sbjct: 365 IDDVKSAAVEAVLLLQAKI---NDYEDDR------MNLRLLVPNKVIGCLIGRGGSIVND 415
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE---------- 215
+R +T+A I I K + P A S DEL++V+GE +R ALVQI RL E
Sbjct: 416 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKESVESQ 474
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSA--------------------------PLVGSYGN 249
N R L +++S ++Y SS + L A P SYG
Sbjct: 475 NSDRDGKLTVATSDSLYGSS-LSLPALLPHNPQIAPLSYDRRGESERALEVFPRTSSYGY 533
Query: 250 YSARRDE----------ASAREFSL---RLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
S + + + A E L + PA + V+GK G + IR+ SGA I+
Sbjct: 534 SSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIRKISGAHIE 593
Query: 297 VDSSGAEGDDCIIFIS 312
+ S + D I +IS
Sbjct: 594 IIESKSSRHDHIAYIS 609
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 233/436 (53%), Gaps = 69/436 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
+YR LCP IGS+IGK G ++ +R +T + +++ + PG D+R++ +Y + +L
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 104 E--DSGEFVSPAQDALFRVHDRIV-AEDSLADD--EFGELTLITVRMLVPADQIGCVIGK 158
D E V AQDAL RVH+ IV A +L + + + + +LVPA Q VIGK
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGK 160
Query: 159 GGQVIQNIRTETRAQIRI-LKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G VI+++R+ +RA I++ KD P CA+SFD +Q+ G V+KAL +++ +++
Sbjct: 161 SGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYK 220
Query: 216 NPSR------------SQHLLLSSSSNIYQSSGVYLSAP------------LVGS----- 246
+PS+ + +++ S +Y +S Y SAP ++GS
Sbjct: 221 HPSKENIPLETSIPDPTPSIIIPSELPVYPASNFY-SAPDAAIPSVHPSMSVLGSTRHVP 279
Query: 247 ---------------------YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
YSA + + E R++CP G IG VIG+GG IK
Sbjct: 280 ELAVPADDHGRLPIYQSILPVIPTYSAPK---CSGELEFRVLCPGGKIGLVIGRGGATIK 336
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGD 344
IRQESGA I VD + + ++ II I + E +D S + A L LQ + + +S D
Sbjct: 337 NIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLLLQAKIN-----DSED 391
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
+ R+LVP+ IGCLIGRGG+I+++MR T+A+I +++ + P+ A +E+V+++G
Sbjct: 392 DRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGE 450
Query: 405 LDVASSALSQVTLRLR 420
D AL Q+ LRLR
Sbjct: 451 ADKLRDALVQIILRLR 466
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 147/318 (46%), Gaps = 71/318 (22%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LCP KIG +IG+GG +K +R E+ + I + + +E I+TI S+ E
Sbjct: 315 FRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIIST-------ES 367
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+ + S A +A+ + +I D E + L R+LVP IGC+IG+GG ++ +
Sbjct: 368 TDDVKSAAVEAVLLLQAKI------NDSEDDRMNL---RLLVPNKVIGCLIGRGGSIVND 418
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE---------- 215
+R +T+A I I K + P A S DEL++V+GE +R ALVQI RL E
Sbjct: 419 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQ 477
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSA--------------------------PLVGSYG- 248
N R L +++S ++Y SS + L A P SYG
Sbjct: 478 NSDRDGQLTVAASDSLYGSS-LPLPALLPHNQQIAPLGYDRRGEPERALEVFPRTSSYGY 536
Query: 249 --------------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGAS 294
+Y+++ E L + PA I V+GK G + IR+ SGA
Sbjct: 537 SSMQVTDDGYGGLPSYASKAYEEHVPR--LEMTVPASGISKVMGKHGTNLDNIRKISGAH 594
Query: 295 IKVDSSGAEGDDCIIFIS 312
I++ + + I +IS
Sbjct: 595 IEIIEPKSSRHEHIAYIS 612
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 201/592 (33%), Positives = 285/592 (48%), Gaps = 104/592 (17%)
Query: 7 INYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIV 66
+ KR H ++ TNG SK + + + RG+ V+R LCP K G IIGKGG I+
Sbjct: 5 LTPAKRPHDRNHTETNGKSKLQKTVN-SPVRGV-----VFRILCPASKTGGIIGKGGAII 58
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYSSSE---------------------------- 98
Q+R ET + +R+ ETVPG DER+V I + S+
Sbjct: 59 SQIRQETGAKVRVEETVPGSDERVVIIAAGSDKEMEVNNAEQNRGDSDDKEPNVGEESNG 118
Query: 99 ---GTNLFEDSGEFVS------------PAQDALFRVHDRIVAEDSLADD---EFGELTL 140
G++ +++ E VS Q AL V +R++ + D+ E + ++
Sbjct: 119 KQAGSDEDDENKETVSVEHSTKSVRETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSM 178
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
T+R+LV + Q+GC++GKGG VI+ + E+ AQIRIL + LP+CA DEL+Q+AGE
Sbjct: 179 STLRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPICASPTDELVQIAGEVD 238
Query: 201 VVRKALVQIASRLHENPSRSQHLLLS-SSSNIYQSSGVYLSAP--LVGSYGNYSARRDE- 256
+RKAL +A +L ENP + S+ S G L P Y +++AR
Sbjct: 239 AIRKALQSVAQQLLENPPKDPEAYPPISTGPSSHSFGHPLPRPEAYPPPYHSFNARGTTY 298
Query: 257 -ASAREF----------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
A REF + RL+C +GGVIGKGG IIK ++QE+G IKV
Sbjct: 299 GAGPREFHEGGMPGRMRPAPDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLE 358
Query: 300 SGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESG-DPVITTRILVPSAQ 357
++ +D II IS +D S A LR+Q R + G + + R+LV S Q
Sbjct: 359 GVSDSEDRIILISGPAHPDDRISAAQDAVLRVQTRIARALPLPEGKEKAVIGRLLVSSNQ 418
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
IGCL+G+GGAI++EMR +T A IRIL + +PK A E+EE+VQI G +V AL Q+T
Sbjct: 419 IGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEALLQITT 478
Query: 418 RLRANTFERE-----------GALAAHPPVLPYV-------PM----SLD----ITDGSK 451
RLR N F R+ L PP PY+ P S D
Sbjct: 479 RLR-NHFFRDVFPSIDHPSNPAFLDQAPPFPPYMGRRELSPPFHAFHSFDGMGGPPPPVG 537
Query: 452 YGNRDNQSRGRGNSYATGNLPG--RDSYGSYGGSLSGGGNAYGAYGDHSSGR 501
+ D+ S N + G P R +G G +GG +G H R
Sbjct: 538 FHPHDDHSPFMHNIHRPGMPPHFERKPWGPQGLMEAGGPMGLPEFGGHPQRR 589
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 221/423 (52%), Gaps = 49/423 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
V+R LC +IG+ IGK G ++K L+ T + IRI + C ER++ + NL
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVI-----VNLN 74
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQV 162
D ++P Q+AL +V +RI+ + D G +++ R+LV A Q G VIGKGG V
Sbjct: 75 GDGDVSLNP-QEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMV 133
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
+ IR +T +IR+L D+ LP C DE++++ G + V+KALV +A RL + P +
Sbjct: 134 VAKIRADTGCRIRVLNDK-LPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRT 192
Query: 223 LLLSS---------------------------------SSNIYQSSGV-YLSAPLVGSYG 248
++ + S++ +S+GV S PL
Sbjct: 193 KMMGTRPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSNGVPSKSHPLSVEDN 252
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
S+ EA +E + R++C IG V+GKGG I+K ++ E+GA+I V E +D +
Sbjct: 253 RVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRL 312
Query: 309 IFISTKEFFEDP-SPTITAALRLQPR----CSEKT--ERESGDPVITTRILVPSAQIGCL 361
I I+ E E SP A + + R C EK R + + +T +++VPS Q+G L
Sbjct: 313 ITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVL 372
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
+G+GGAI+SEMR AT SIRI N VPK A ++++VQI+G L AL T RLR
Sbjct: 373 LGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRD 432
Query: 422 NTF 424
+ F
Sbjct: 433 HIF 435
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 147/322 (45%), Gaps = 77/322 (23%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +R LC +IG+++GKGG IVK L++ET +NI + V C++R++TI +
Sbjct: 264 QEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITA------ 317
Query: 102 LFEDSGEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
E+ SPAQ+A+ V R + + + D + + +T +++VP++Q+G ++GKG
Sbjct: 318 -LENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKG 376
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
G ++ +R T IRI ++ +P CA D+++Q++GE VR AL RL ++
Sbjct: 377 GAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDHIFL 436
Query: 217 ---------PSR------------------------------SQHLLLSSSSNIYQSSGV 237
P R HL LS +S SSGV
Sbjct: 437 IAQNSGGTGPYRRPRDSIPLGLGGQSVVGSNHGPSIHSLSQSMDHLTLSRNSGRSASSGV 496
Query: 238 YLSAPLV-----GSYGNYSARR-------------------DEASAREFSLRLVCPAGNI 273
+ AP V Y + + RR + A ++ ++ P I
Sbjct: 497 W--APKVVGGKNSRYTDDAGRRLNPREGDLELASGSNTVIGNAAIITNTTVEIMLPNDII 554
Query: 274 GGVIGKGGGIIKQIRQESGASI 295
G V G+ G + Q+RQ SGA +
Sbjct: 555 GSVYGENGSNLDQLRQISGAKV 576
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 266/529 (50%), Gaps = 81/529 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN-LFE 104
+R LC +IG +IGK G ++KQL+ T IR+ E +R+VT+ S T+ +F
Sbjct: 55 FRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFL 114
Query: 105 D-----SGEFV--SPAQDALFRVHDRI--VAEDSLADDEFGELTLITVRMLVPADQIGCV 155
+ SGE V S AQ+ L +V +RI VA + + E+ ++ R+L Q+G V
Sbjct: 115 EQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSV 174
Query: 156 IGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
IGKGG+V++ IR E+ +IR+L D+ LP CA DE++++ G+ ++KAL+ ++ RL +
Sbjct: 175 IGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQD 233
Query: 216 NPSRSQ--------------------HLL--------LSSSSNIYQSSGVY---LSAPLV 244
P + H+L L SSSNI+ +SG++ + A ++
Sbjct: 234 CPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIF-ASGIHSLSIDADML 292
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A++D +++C IGGVIGKGG I++ ++ ESGA++ V S
Sbjct: 293 PPVDTNVAQQD------VVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGC 346
Query: 305 DDCIIFISTKEFFEDP-SPTITAALRLQPRCS----EKTERES--GDPVITTRILVPSAQ 357
D+ +I I+ E E SP A + + R EK + S G PV+ R++VPS Q
Sbjct: 347 DERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVA-RLVVPSNQ 405
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
+GC++G+GG IISE+R T +IRI++++ VP A E +E+VQI+G AL VT
Sbjct: 406 VGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTG 465
Query: 418 RLRANTFERE---------GALAAHPPVLPY------VPMSLDITDGSKYGNRDNQSRGR 462
RLR N F G + +P PY P+ G+ +G+ S +
Sbjct: 466 RLRDNLFSSVLSNSGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQ 525
Query: 463 GNSYATGNLPGRDSYGSYG----GSLSGGGNAYGAYGDHSSGRGLSGHR 507
+S G DS S G SLSG + +GRGL HR
Sbjct: 526 -SSDDLGLSHSLDSPSSPGLWPPQSLSG----ISSRAISDAGRGLPSHR 569
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 154/479 (32%), Positives = 253/479 (52%), Gaps = 70/479 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LC ++G+IIGK G ++K L+ T + IRI + P +R++ + + + ++
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAASD---- 82
Query: 106 SGEFVSPAQDALFRVHDRI--VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
GE VS AQ AL +V DR+ VA ++ A E G+ +++ R+L Q+G VIGK G+V+
Sbjct: 83 -GE-VSTAQVALLKVFDRVLDVAAET-AGTEVGD-RVVSCRLLADTSQVGAVIGKAGKVV 138
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP------ 217
+ IR +T +IR+L +E LP C DE+++V G+ V+KALV ++ L + P
Sbjct: 139 EKIRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRTK 197
Query: 218 -----------SRSQHLLLSSSSNIY----------------QSSGVYLSAPLVGSYGN- 249
S + + L S +N++ +S+G AP + + N
Sbjct: 198 MTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKLSAEVNR 257
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
SA +A +E + R++C +G VIGKGG I++ ++ ESGA I S E +D ++
Sbjct: 258 VSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLV 317
Query: 310 FISTKEFFEDP----SPTITAALRLQPRCSEK---------TERESGDPVITTRILVPSA 356
I+ E ++P SP A + + + E +++ES +T +++VPS
Sbjct: 318 TITASE--QNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKES---YVTAQLVVPSN 372
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
Q+GCL+G+GGAI+SEMR AT A+IR++ N+ VPK +++++VQI+G +A+ T
Sbjct: 373 QVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNAT 432
Query: 417 LRLRANTF---EREGALAAHPPVL----PYVPMSLDITDGSKYGNRDNQSRGRGNSYAT 468
RLR N F + G + VL P V +SL + S G + Q+ NS T
Sbjct: 433 GRLRDNLFVSTQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVAGINSRVT 491
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 105/177 (59%), Gaps = 8/177 (4%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +R +C ++G++IGKGG IV+ L++E+ + I ++ C++R+VTI +S +
Sbjct: 268 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQ--- 324
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG--ELTLITVRMLVPADQIGCVIGKG 159
+ SPAQ A+ V + V + G + + +T +++VP++Q+GC++GKG
Sbjct: 325 ---NPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKG 381
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
G ++ +R T A IR++ ++ +P C D+L+Q++GE + V+ A+ RL +N
Sbjct: 382 GAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDN 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 7/177 (3%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
++ N R + RL+C A +G +IGK G +IK +++ +GA I+++ + +
Sbjct: 9 NHSNGHVNRSRPYTTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSP 68
Query: 306 DCIIFISTKEFFED--PSPTITAALRLQPR----CSEKTERESGDPVITTRILVPSAQIG 359
D +I +S D S A L++ R +E E GD V++ R+L ++Q+G
Sbjct: 69 DRVILVSAPAAASDGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVG 128
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+IG+ G ++ ++R T IR+L NE +P +E+V++ G L AL V+
Sbjct: 129 AVIGKAGKVVEKIRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAVS 184
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 167/510 (32%), Positives = 260/510 (50%), Gaps = 63/510 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN-LFE 104
+R LC +IG +IGK G ++KQL+ T IR+ E +R+VT+ S T+ +F
Sbjct: 60 FRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALTSRVFL 119
Query: 105 D-----SGEFV--SPAQDALFRVHDRI--VAEDSLADDEFGELTLITVRMLVPADQIGCV 155
+ SGE V S AQ+ L +V +RI VA + + E+ ++ R+L Q+G V
Sbjct: 120 EQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLADVAQVGSV 179
Query: 156 IGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
IGKGG+V++ IR E+ +IR+L D+ LP CA DE++++ G+ ++KAL+ ++ RL +
Sbjct: 180 IGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKALLAVSRRLQD 238
Query: 216 NPSRSQ--------------------HLL--------LSSSSNIYQSSGVY---LSAPLV 244
P + H+L L SSSNI+ +SG++ + A ++
Sbjct: 239 CPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIF-ASGIHSLSIDADML 297
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A++D +++C IGGVIGKGG I++ ++ ESGA++ V S
Sbjct: 298 PPVDTNVAQQD------VVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGC 351
Query: 305 DDCIIFISTKEFFEDP-SPTITAALRLQPRCS----EKTERES--GDPVITTRILVPSAQ 357
D+ +I I+ E E SP A + + R EK + S G PV+ R++VPS Q
Sbjct: 352 DERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVA-RLVVPSNQ 410
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
+GC++G+GG IISE+R T +IRI++++ VP A E +E+VQI+G AL VT
Sbjct: 411 VGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTG 470
Query: 418 RLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSY 477
RLR N F L + V P+ G+ +G+ S + +S G DS
Sbjct: 471 RLRDNLF-----LVPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQ-SSDDLGLSHSLDSP 524
Query: 478 GSYGGSLSGGGNAYGAYGDHSSGRGLSGHR 507
S G + + +GRGL HR
Sbjct: 525 SSPGLWPPQSLSGISSRAISDAGRGLPSHR 554
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 235/460 (51%), Gaps = 59/460 (12%)
Query: 22 NGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE 81
NG SKR + +R LC +IG +IGK G ++K L+ T + IRI +
Sbjct: 23 NGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIED 82
Query: 82 TVPGCDERIVTIYSS---SEGTNLFEDSGEFVSPAQDALFRVHDRIV-AEDSLADDEFGE 137
+R++ + + S L + VS AQ+AL +V DRI+ + + G+
Sbjct: 83 APQESPDRVILVIADAALSCKVLLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGD 142
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAG 197
+++ R++ + Q G VIGKGG+V++ I+ ET +IR+L D+ LPLCA + DE++++ G
Sbjct: 143 -RVMSCRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEMIEIEG 200
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSS-NIYQSSG-------VYLSAP------- 242
+ V+KALV ++ RL + PS ++ ++ + I Q + +AP
Sbjct: 201 RVSSVKKALVAVSQRLQDCPSVNRIKMMGNKPYEIVQYETLDALPREILTAAPRGTLTVV 260
Query: 243 -------------------------------LVGSYGNYSARRDEASAREFSLRLVCPAG 271
L S+ +A +E S R++C
Sbjct: 261 PHETVDHLLLRSSALSTLSSSSNSYATRVHSLSAEVNRVSSLEPKALQQEVSFRILCSND 320
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRL 330
+GGVIGKGG I++ ++ E+GA+I + AE +D +I I+ E E SP AA+ +
Sbjct: 321 RVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRYSPAQKAAVLV 380
Query: 331 QPRCSE---KTERESG---DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
R E + E +SG +T R++VPS+Q+GCLIG+GG I+SE+R AT A+IRI+
Sbjct: 381 FSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIG 440
Query: 385 NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
+ VPK A +++++VQI+G AL T RLR N F
Sbjct: 441 TDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLF 480
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 276/565 (48%), Gaps = 115/565 (20%)
Query: 11 KRTHFQSDAATNGGSKRR--NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
++ + +++ +N KRR N G++ + E +YR LCP+ +G +IGK G+++
Sbjct: 7 RKQNQRNNNESNRNQKRRISNNGEKINR----DELVIYRILCPIDVVGGVIGKSGKVINA 62
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSS-----SEGTNLFEDSGEFVSPAQDALFRVHDR 123
+R TK+ I++ + + GC +R++TIY S E + + E + AQDAL +V+D
Sbjct: 63 IRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKVYDA 122
Query: 124 IVAED----SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
IVA D + D+ E L LVP+ Q +IGK G+ I+ IR+ TRA ++++ K
Sbjct: 123 IVASDEENIKIDRDDKKECLL-----LVPSSQSFSLIGKAGENIKRIRSTTRASVKVVSK 177
Query: 179 DEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHE-NPSRSQHLLLSS-------- 227
D P +CA+ +D ++ ++GEP V+KAL +++ L++ NP +H+ L S
Sbjct: 178 DVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINP--REHIPLDSTGQDVPAS 235
Query: 228 -------SSNIYQSSGV----------------YLSAPLVGSYGNYSARRDE-------- 256
S+++Y +G Y +A V ++ Y+
Sbjct: 236 IIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVSNFQGYAETAANPMPVFASS 295
Query: 257 ----------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGD 305
+ ++E L+++CP NI VIGKGG IK+IR+ SG+ I+V DS GD
Sbjct: 296 LPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGD 355
Query: 306 D-CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
D C+I ++ E +D S + A L LQ +++ + + ++ V S IGC+IG
Sbjct: 356 DECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEK-----VKMQLFVSSKDIGCVIG 410
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
+ G++I+E+R T A+I I + +++V++ G + +A+ Q+ LRLR +
Sbjct: 411 KSGSVINEIRKRTNANICISKGKK--------DDLVEVAGEISSVRNAIIQIVLRLREDV 462
Query: 424 FEREGALAA--HPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLP----GRDSY 477
++AA PP DN S G+S A LP S
Sbjct: 463 LGDRDSVAASRKPP-----------------ARTDNYSLFSGSSNAGYTLPSFMSSASSS 505
Query: 478 GSYG-GSLSGGGNAYGAYGDHSSGR 501
G +G GS G N +G+ +S GR
Sbjct: 506 GFHGYGSFPAGDNVFGSVSPYSFGR 530
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 152/308 (49%), Gaps = 59/308 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC-DERIVTIYSSSEG 99
S++ V + LCPL I +IGKGG +K++R + S I ++++ C D+ V I +++E
Sbjct: 308 SKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATES 367
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ + S A +A+ + + I ED+ + +++ V + IGCVIGK
Sbjct: 368 PD------DMKSMAVEAVLLLQEYINDEDA---------EKVKMQLFVSSKDIGCVIGKS 412
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
G VI IR T A I I K + D+L++VAGE + VR A++QI RL E+
Sbjct: 413 GSVINEIRKRTNANICISKGKK--------DDLVEVAGEISSVRNAIIQIVLRLREDVLG 464
Query: 217 -----------PSRSQHL-LLSSSSNI---------------YQSSGVYLSAP-LVGSYG 248
P+R+ + L S SSN + G + + + GS
Sbjct: 465 DRDSVAASRKPPARTDNYSLFSGSSNAGYTLPSFMSSASSSGFHGYGSFPAGDNVFGSVS 524
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDC 307
YS R +S+ +L ++ PA + V+GKGGG ++ IR+ SGA I++ DS ++GD
Sbjct: 525 PYSFGRLPSSS---ALEILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGDHI 581
Query: 308 IIFISTKE 315
+ T E
Sbjct: 582 ALLSGTLE 589
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 271/563 (48%), Gaps = 109/563 (19%)
Query: 11 KRTHFQ-SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
KR Q +++ +N KRR D+ + E VYR LCP+ +G +IGK G+++ +
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKINR----DELVVYRILCPIDVVGGVIGKSGKVINAI 61
Query: 70 RSETKSNIRISETVPGCDERIVTIYSS----SEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
R TK+ I++ + + GC +R++TIY S E + E + AQDAL +V+D IV
Sbjct: 62 RHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIV 121
Query: 126 AEDSLADDEFGELTLI------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
A +D+E T + R+LVP Q +IGK G+ I+ IR TRA ++++ K
Sbjct: 122 A----SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSK 177
Query: 179 DEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHE-NP-------SRSQHLLLSS- 227
D P +CA+ +D ++ ++GEP V++AL +++ +++ NP S SQ + +S
Sbjct: 178 DVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASV 237
Query: 228 ------SSNIYQSSGVYLSAPL-------VGSYGNYSARRD------------------- 255
S+++Y +G Y + V SY N + D
Sbjct: 238 IVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSL 297
Query: 256 --------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDD 306
+ + E +++CP NI VIGKGG IK+IR+ SG+ I+V DS GDD
Sbjct: 298 PVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDD 357
Query: 307 -CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
C+I ++ E +D S + A L LQ E E + V ++LV S IGC+IG+
Sbjct: 358 ECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENV-KMQLLVSSKVIGCVIGK 412
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G++I+E+R T A+I I + +++V+++G + AL Q+ LRLR +
Sbjct: 413 SGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVL 464
Query: 425 EREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPG-----RDSYGS 479
+ ++A P DN S G+S A LP + G
Sbjct: 465 GDKDSVATRKP----------------PARTDNCSFLSGSSNAGYTLPSFMSSMASTSGF 508
Query: 480 YG-GSLSGGGNAYGAYGDHSSGR 501
+G GS G N G+ G +S GR
Sbjct: 509 HGYGSFPAGDNVLGSTGPYSYGR 531
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 271/563 (48%), Gaps = 109/563 (19%)
Query: 11 KRTHFQ-SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
KR Q +++ +N KRR D+ + E VYR LCP+ +G +IGK G+++ +
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKINR----DELVVYRILCPIDVVGGVIGKSGKVINAI 61
Query: 70 RSETKSNIRISETVPGCDERIVTIYSS----SEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
R TK+ I++ + + GC +R++TIY S E + E + AQDAL +V+D IV
Sbjct: 62 RHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIV 121
Query: 126 AEDSLADDEFGELTLI------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
A +D+E T + R+LVP Q +IGK G+ I+ IR TRA ++++ K
Sbjct: 122 A----SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSK 177
Query: 179 DEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHE-NP-------SRSQHLLLSS- 227
D P +CA+ +D ++ ++GEP V++AL +++ +++ NP S SQ + +S
Sbjct: 178 DVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASV 237
Query: 228 ------SSNIYQSSGVYLSAPL-------VGSYGNYSARRD------------------- 255
S+++Y +G Y + V SY N + D
Sbjct: 238 IVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSL 297
Query: 256 --------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDD 306
+ + E +++CP NI VIGKGG IK+IR+ SG+ I+V DS GDD
Sbjct: 298 PVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDD 357
Query: 307 -CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
C+I ++ E +D S + A L LQ E E + V ++LV S IGC+IG+
Sbjct: 358 ECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENV-KMQLLVSSKVIGCVIGK 412
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G++I+E+R T A+I I + +++V+++G + AL Q+ LRLR +
Sbjct: 413 SGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVL 464
Query: 425 EREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPG-----RDSYGS 479
+ ++A P DN S G+S A LP + G
Sbjct: 465 GDKDSVATRKP----------------PARTDNCSFLSGSSNAGYTLPSFMSSMASTSGF 508
Query: 480 YG-GSLSGGGNAYGAYGDHSSGR 501
+G GS G N G+ G +S GR
Sbjct: 509 HGYGSFPAGDNVLGSTGPYSYGR 531
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 58/304 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC-DERIVTIYSSSEG 99
SE+ V++ LCPL I +IGKGG +K++R + S I ++++ C D+ V I +++E
Sbjct: 309 SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATES 368
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ + S A +A+ + + I ED+ + +++LV + IGCVIGK
Sbjct: 369 PD------DMKSMAVEAVLLLQEYINDEDA---------ENVKMQLLVSSKVIGCVIGKS 413
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
G VI IR T A I I K + D+L++V+GE + VR AL+QI RL E+
Sbjct: 414 GSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 217 ----------PSRSQHL-LLSSSSN-----------IYQSSGV--YLSAP----LVGSYG 248
P+R+ + LS SSN + +SG Y S P ++GS G
Sbjct: 466 DKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSFPAGDNVLGSTG 525
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
YS R +S+ +L ++ PA + V+GKGGG ++ IR+ SGA I++ +S D I
Sbjct: 526 PYSYGRLPSSS---ALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHI 582
Query: 309 IFIS 312
+S
Sbjct: 583 ALLS 586
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 223/447 (49%), Gaps = 59/447 (13%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E +PG +ERI+ I +
Sbjct: 75 TSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDP-- 132
Query: 104 EDSGEFVSPAQDALFRVHDRIVAED-------SLADDEFGELTL------ITVRMLVPAD 150
E SPAQ+ALF +HDRI+ D + +DE+G + + R++V
Sbjct: 133 EGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRM 192
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAGEPAVVRKALVQI 209
+GC++GKGG++I+ +R ET+ QIRIL +H LP C +E++QV G+ V+ A+ I
Sbjct: 193 HVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAII 252
Query: 210 ASRLHENPSRSQ-----HLLLSSSSNIYQSSGVY-----------LSAPLVGSYG----- 248
+SRL E+ R + H + S + + P GS
Sbjct: 253 SSRLRESQHRDRSHGNFHGRMHSPERFFPDDDYVPHMNNTGRRSSIDGPSFGSRASGPNY 312
Query: 249 ---NYSARRD----EA------SAREFS-----LRLVCPAGNIGGVIGKGGGIIKQIRQE 290
NYS+R+ EA SA+ F R++CPA + V+G+ GI+ ++ +
Sbjct: 313 RNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNKVVGESDGILDLLQND 372
Query: 291 SGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITT 349
G +KV + D+ +I IS++E +D P A L +Q + D +I T
Sbjct: 373 IGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHIIDLV--PDSDNIIKT 430
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
+++V S +IGCL GR G+ +SEM T A I+IL E +P E +E+VQI G + A
Sbjct: 431 KLIVSSGEIGCLEGRDGS-LSEMERLTGAKIQILPREKLPACVSEADELVQIEGEIKAAR 489
Query: 410 SALSQVTLRLRANTFEREGALAAHPPV 436
AL +VT RLR+ ++ PP+
Sbjct: 490 DALVEVTSRLRSYLYKEYFQKDTPPPI 516
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 100/172 (58%), Gaps = 14/172 (8%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+D V+R LCP K+ ++G+ I+ L+++ ++++S+ V G DE+++ I SS EG +
Sbjct: 342 DDLVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIII-SSEEGPD 400
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ + PAQ+AL + I+ D + D + +I +++V + +IGC+ G+ G
Sbjct: 401 ------DELFPAQEALLHIQTHII--DLVPDSD----NIIKTKLIVSSGEIGCLEGRDGS 448
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+ + R T A+I+IL E LP C DEL+Q+ GE R ALV++ SRL
Sbjct: 449 LSEMERL-TGAKIQILPREKLPACVSEADELVQIEGEIKAARDALVEVTSRL 499
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 122/284 (42%), Gaps = 53/284 (18%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
S R++C GGVIGK G IIK IRQ +GA I V ++ II IS DP
Sbjct: 76 SYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEISDTRR-RDPEG 134
Query: 321 -----SPTITAALRLQPRCSE----------KTERESG-------DPVITTRILVPSAQI 358
SP A + R E E E G + + TR++V +
Sbjct: 135 RMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSRMHV 194
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNEN-VPKVAYEDEEMVQITGSLDVASSALSQVTL 417
GCL+G+GG II +MR T+ IRIL ++ +P+ EE+VQ+ G ++ +A++ ++
Sbjct: 195 GCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAIISS 254
Query: 418 RLRANTFER------EGALAAHPPVLP---YVPMSLDI-----TDGSKYGNRDNQSRGRG 463
RLR + G + + P YVP + DG +G SR G
Sbjct: 255 RLRESQHRDRSHGNFHGRMHSPERFFPDDDYVPHMNNTGRRSSIDGPSFG-----SRASG 309
Query: 464 NSYATGNLPGRDSYGSYGGSLSGGG----NAYGAYGDHSSGRGL 503
+Y N R YG ++ G +A YGD R L
Sbjct: 310 PNYRNSNYSSR----QYGYNVEAGAPVADSAQPFYGDDLVFRML 349
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 149/439 (33%), Positives = 219/439 (49%), Gaps = 68/439 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E +PG +ERI+ I T
Sbjct: 86 TSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 141
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAED-----------SLADDEFGEL--TLITVRMLVP 148
+ G SPAQ+ALF +HDRI+ D +DE+ + R++V
Sbjct: 142 DPEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVS 201
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAGEPAVVRKALV 207
+GC++GKGG++I+ +R ET+ QIRIL +H LP C +E++QV G+ V+ A+
Sbjct: 202 RMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVA 261
Query: 208 QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS----------------APLVGSY---- 247
I+SRL E SQH S QS +L P GS
Sbjct: 262 IISSRLRE----SQHRDRSHFHGRVQSPERFLDDDYVPHMNTRRSSMDGPPSFGSRLSGP 317
Query: 248 ----GNYSARR-----------DEASAREF-----SLRLVCPAGNIGGVIGKGGGIIKQI 287
NYS+R + SA+ F R++CP + V+G+ G++ +
Sbjct: 318 NYRNNNYSSRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVDLL 377
Query: 288 RQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPV 346
+ E G +KV + D+ II I ++E +D P A L +Q R + + D +
Sbjct: 378 QNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIVDLVADK--DNI 435
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
ITTR+LVPS++IGCL GR G++ SEM S T A+I IL E +P +E+VQI G +
Sbjct: 436 ITTRLLVPSSEIGCLEGRDGSL-SEMESLTGATIEILPKEMLPTYLSGTDELVQIQGEVK 494
Query: 407 VASSALSQVTLRLRANTFE 425
A AL +VT RLR+ ++
Sbjct: 495 AARDALVEVTSRLRSYLYK 513
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 23/209 (11%)
Query: 6 NINYGKRTH-FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGE 64
N NY R F DA + + P ED V+R LCP+ K+ ++G+
Sbjct: 321 NNNYSSRAPGFPVDAGADPNADSAQP--------FYVEDLVFRILCPIDKVNRVVGESDG 372
Query: 65 IVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI 124
+V L++E ++++++ V G DE+I+TI S EG + + + PAQ+AL + RI
Sbjct: 373 LVDLLQNEIGVDVKVADPVSGSDEQIITI-CSEEGPD------DELFPAQEALLHIQTRI 425
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
V D +AD + +IT R+LVP+ +IGC+ G+ G + + + T A I IL E LP
Sbjct: 426 V--DLVADKD----NIITTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPT 478
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRL 213
DEL+Q+ GE R ALV++ SRL
Sbjct: 479 YLSGTDELVQIQGEVKAARDALVEVTSRL 507
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI---SETVPGC-- 86
+E E G G R + +G ++GKGG+I++Q+R ETK+ IRI T+P C
Sbjct: 182 EEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVS 241
Query: 87 -DERIVTI 93
E IV +
Sbjct: 242 VSEEIVQV 249
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 226/447 (50%), Gaps = 63/447 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E +PG +ERI+ I T
Sbjct: 4 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD----TRRR 59
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ G SPAQ+ALF +HDRI+ D+ FG M+V +GC++GKGG+
Sbjct: 60 DPEGRMPQFSPAQEALFMIHDRILESDA----GFGN------GMVVSRMHVGCLLGKGGK 109
Query: 162 VIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I+ +R ET+ QIRIL +D +LP C +E++QV G+ V+ A+ I+SRL E+ R
Sbjct: 110 IIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRD 169
Query: 221 Q---HLLLSSSSNIY---------------------QSSGVYLSAPLVGSYGNYSARRDE 256
+ H + SS + S G +S LVG+ N A R
Sbjct: 170 RSHFHGRIQSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTGLVGTRSNSFASRTS 229
Query: 257 A------------SAREF-----SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+A++F R++CP + V+G+ GII+ ++ E G +KV
Sbjct: 230 GYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVAD 289
Query: 300 SGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQI 358
A ++ II I+++E +D P A L +Q R + VITTR+LVPS++I
Sbjct: 290 HVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKEN--VITTRLLVPSSEI 347
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
GC GR + +SEMR T A+I+I+ E +P +E+++I G + A AL +VT R
Sbjct: 348 GCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVEVTSR 406
Query: 419 LRANTFEREGALAAHPPVLPYVPMSLD 445
LR+ + RE PP P SL+
Sbjct: 407 LRSYLY-REFFPKDMPPPSISAPGSLE 432
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 19/186 (10%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P + Q+ +G ED V+R LCP+ K+ ++G+ I++ L++E ++++++ V G +E+
Sbjct: 239 PIADNAQQFLG-EDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQ 297
Query: 90 IVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLV 147
I+ I +S EG + LF PAQ+AL + RIV + L D E +IT R+LV
Sbjct: 298 IIVI-TSEEGPDDELF--------PAQEALLHIQTRIV--NLLPDKE----NVITTRLLV 342
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
P+ +IGC G+ + +R T A I+I+ E LP DELL++ GE R ALV
Sbjct: 343 PSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALV 401
Query: 208 QIASRL 213
++ SRL
Sbjct: 402 EVTSRL 407
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 229/460 (49%), Gaps = 66/460 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E +PG +ERI+ I T
Sbjct: 67 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRR 122
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFGELTL-------------ITVRMLVP 148
+ G SPAQ+ALF +HDRI+ D+ + FG + RM+V
Sbjct: 123 DPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVS 182
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALV 207
+GC++GKGG++I+ +R ET+ QIRIL +D +LP C +E++QV G+ V+ A+
Sbjct: 183 RMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIA 242
Query: 208 QIASRLHENPSRSQ---HLLLSSSSNIY---------------------QSSGVYLSAPL 243
I+SRL E+ R + H + SS + S G +S L
Sbjct: 243 NISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTGL 302
Query: 244 VGSYGNYSARRDEA------------SAREF-----SLRLVCPAGNIGGVIGKGGGIIKQ 286
VG+ N A R +A++F R++CP + V+G+ GII+
Sbjct: 303 VGTRSNSFASRTSGYTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIEL 362
Query: 287 IRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP 345
++ E G +KV A ++ II I+++E +D P A L +Q R +
Sbjct: 363 LQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKEN-- 420
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
VITTR+LVPS++IGC GR + +SEMR T A+I+I+ E +P +E+++I G +
Sbjct: 421 VITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEI 479
Query: 406 DVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLD 445
A AL +VT RLR+ + RE PP P SL+
Sbjct: 480 KAARDALVEVTSRLRSYLY-REFFPKDMPPPSISAPGSLE 518
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 19/186 (10%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P + Q+ +G ED V+R LCP+ K+ ++G+ I++ L++E ++++++ V G +E+
Sbjct: 325 PIADNAQQFLG-EDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQ 383
Query: 90 IVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLV 147
I+ I +S EG + LF PAQ+AL + RIV + L D E +IT R+LV
Sbjct: 384 IIVI-TSEEGPDDELF--------PAQEALLHIQTRIV--NLLPDKE----NVITTRLLV 428
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
P+ +IGC G+ + +R T A I+I+ E LP DELL++ GE R ALV
Sbjct: 429 PSSEIGCFEGRDCS-LSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALV 487
Query: 208 QIASRL 213
++ SRL
Sbjct: 488 EVTSRL 493
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 230/441 (52%), Gaps = 58/441 (13%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LC +IG IIGK G I+KQL+ ++ + IRI E+ +R++T+ + + +
Sbjct: 58 FRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKVRV 117
Query: 106 SGEFV--SPAQDALFRVHDRIV---AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V S AQ+ L RV +RI+ AE + G +++ RML + Q G VIGKGG
Sbjct: 118 ESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGKGG 177
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH------ 214
+V++ IR + +IR+L D+ LP+CA +E++++ G+ V+KAL+ ++ L
Sbjct: 178 KVVEKIRKDCGVKIRVLTDK-LPVCAGPNEEMIEIEGDILSVKKALIAVSRCLQDCQPVD 236
Query: 215 --------------ENPSRSQHLLLSSSSNIY----QSSGVYLSAPLVGSYGNYSARRDE 256
+ P + ++ NI Q++ V AP+ ++ + R
Sbjct: 237 KPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVS-CAPVPHNFLLETDRVPS 295
Query: 257 ASAREFS----LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ F +++CP +GGVIGKGG IIK ++ E+GASI + ++ AE D+ +I +
Sbjct: 296 LDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVI 355
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E +P +AA + ++ +R++VPS Q+GCL+G+GG IIS+M
Sbjct: 356 ASE---NPESRYSAA-------------QKAVVLVFSRLVVPSNQVGCLLGKGGIIISDM 399
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA 432
R T SI+IL + +PK E+E++VQI+G A+ VT RLR N F AL+
Sbjct: 400 RKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDNLF--SSALST 457
Query: 433 HPPVLPYVPMSLDITDGSKYG 453
P + IT+ S YG
Sbjct: 458 -----PVTRSTTVITEASPYG 473
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 96/175 (54%), Gaps = 28/175 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ V++ LCP +G +IGKGG I+K L++ET ++I I T+ DER++T+ +S
Sbjct: 303 QEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIAS----- 357
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
E+ S AQ A+ V R+V VP++Q+GC++GKGG
Sbjct: 358 --ENPESRYSAAQKAVVLVFSRLV---------------------VPSNQVGCLLGKGGI 394
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
+I ++R T I+IL + LP C ++++Q++G+ V+ A+ + RL +N
Sbjct: 395 IISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDN 449
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF------ISTKE 315
S RL+C A IGG+IGK G IIKQ++Q+SGA I+++ S AE D +I I +K
Sbjct: 56 VSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIVSKV 115
Query: 316 FFEDPSPTITAA----LRLQPRCSEKTERESG-------DPVITTRILVPSAQIGCLIGR 364
E ++ A +R+ R E G V++ R+L S Q G +IG+
Sbjct: 116 RVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAGSVIGK 175
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
GG ++ ++R IR+LT++ +P A +EEM++I G + AL V+
Sbjct: 176 GGKVVEKIRKDCGVKIRVLTDK-LPVCAGPNEEMIEIEGDILSVKKALIAVS 226
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 27/161 (16%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
++ R+L A +IG +IGK G +I+ ++ ++ A+IRI E P A S D ++ V E
Sbjct: 56 VSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRI---EESP--AESSDRVITVIAEGQ 110
Query: 201 VVRKALVQI----ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE 256
+V K V+ SR E R +L ++ +S G+ + A
Sbjct: 111 IVSKVRVESEEVDVSRAQEGLIRVFERILEVAA---ESDGINVVA--------------- 152
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S R++ + G VIGKGG ++++IR++ G I+V
Sbjct: 153 GGGGVVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRV 193
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/360 (35%), Positives = 189/360 (52%), Gaps = 45/360 (12%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGE 198
++ RML Q+GCV+GKGG+ ++ +R E+ AQIR+ ++ E +P CAL DEL+ ++G
Sbjct: 109 VVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGS 168
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV-------------YLSAPLVG 245
+ RKAL+ +++ L +NP S SGV YL P V
Sbjct: 169 FSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPGVDPHSQRSYLPPPHVP 228
Query: 246 SYG--NYSARRDEASAR-----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
Y N+S+ R E R++C +GGVIGKGG I+ ++ E+GAS+KV
Sbjct: 229 DYHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVI 288
Query: 299 SSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQ 357
A+ D+ II IS +E E SP+ A LR+ + SE + +S + R+LVP+
Sbjct: 289 DPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMDKSSS--VPARLLVPAQH 346
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
IGCL+G+GG+II+EMR T ASIRI NE +P+ A ++E+VQ+TGS AL +T
Sbjct: 347 IGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG 406
Query: 418 RLR----ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGN-RDNQSRGRGNSYATGNLP 472
R+R G + +PPV GN +QSR S+ +G +P
Sbjct: 407 RIRDLIIPPKPHPSGGMPPYPPV----------------GNPSHHQSRQEAPSHHSGGMP 450
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 27/255 (10%)
Query: 4 QSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGG 63
S +Y H A N S PG R ++ V+R +C +G +IGKGG
Sbjct: 216 HSQRSYLPPPHVPDYHARNFSSNGAAPG----PRFFVEQEIVFRMICLNDMVGGVIGKGG 271
Query: 64 EIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR 123
++ L+SET +++++ + V DERI+ I + E+S SP+QDAL RV+ +
Sbjct: 272 STIRALQSETGASVKVIDPVADSDERIIVISAR-------ENSEMMRSPSQDALLRVYSK 324
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
I ++ + + + R+LVPA IGC++GKGG +I +R T A IRI +E +P
Sbjct: 325 I------SEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIP 378
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL 243
CA DEL+QV G ++ AL+ I R+ + L++ + SG P
Sbjct: 379 RCAQRNDELVQVTGSFQSIQDALLHITGRIRD-------LIIPPKPH---PSGGMPPYPP 428
Query: 244 VGSYGNYSARRDEAS 258
VG+ ++ +R++ S
Sbjct: 429 VGNPSHHQSRQEAPS 443
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 237/496 (47%), Gaps = 65/496 (13%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E VPG +ERI+ I +
Sbjct: 60 TTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEISDTRRRDP-- 117
Query: 104 EDSGEFVSPAQDALFRVHDRIV--------------AEDSLAD-------DEFGELTLIT 142
E SPAQ+ALF +H+RI+ ED D G +
Sbjct: 118 EGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVA 177
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAV 201
R++V +GC++GKGG++I+ +R ET+ QIRIL +D +LP C +E++Q+ G+
Sbjct: 178 TRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTNA 237
Query: 202 VRKALVQIASRLHENPSRSQ---HLLLSSSSNIYQSSGVYLS-----APLVG-------- 245
V+KA+ ++SRL E+ R + H L S I+ Y+ P+ G
Sbjct: 238 VKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPMDGRPFRPRMS 297
Query: 246 ---SYGN-YSARRDEASA----------------REFSLRLVCPAGNIGGVIGKGGGIIK 285
+ GN YS+R+ + +++CP + VIG+ GII+
Sbjct: 298 ASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGESNGIIE 357
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGD 344
+R + G IKV ++ I+ IS+ E +D P A L +Q R + +
Sbjct: 358 LLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKEN- 416
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
++TTR+LVPS+ IGCL GR G+++ EM+ T A++ I+ E++P +E+VQI G
Sbjct: 417 -IVTTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHIVPREDLPMFVSGADELVQIIGD 474
Query: 405 LDVASSALSQVTLRLRANTFEREGALAAHPPV-LPYVPMSLDITDGSKYGNRDNQSRGRG 463
+ A AL ++T RLR ++ A P V + +SL + + S N + G
Sbjct: 475 IKAARDALVELTSRLRNCLYKEPFQKDASPQVSVQSTMVSLGLEESSSNNNAAAREVHSG 534
Query: 464 NSYATGNLPGRDSYGS 479
N A+ +G+
Sbjct: 535 NDSASTAFQNVQPFGT 550
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 14/212 (6%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
ED V++ LCP+ K+ S+IG+ I++ LR++ +I++S+ V G +E+I+ I SS EG +
Sbjct: 332 EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQIL-IISSDEGPD 390
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ + PAQ+AL + RIV D + D E ++T R+LVP+ IGC+ G+ G
Sbjct: 391 ------DELFPAQEALLHIQTRIV--DLVPDKE----NIVTTRLLVPSSDIGCLEGRDGS 438
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
+++ R T A + I+ E LP+ DEL+Q+ G+ R ALV++ SRL +
Sbjct: 439 LLEMKRL-TGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRNCLYKEP 497
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+S QS+ V L S N +AR
Sbjct: 498 FQKDASPQVSVQSTMVSLGLEESSSNNNAAAR 529
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 111/261 (42%), Gaps = 44/261 (16%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
S +D++ + R++C GGVIGK G IIK IRQ +GA I V ++ II
Sbjct: 49 SKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIE 108
Query: 311 ISTKEFFEDP-------SPTITAALRLQPRCSEK------------TERESGD------- 344
IS DP SP A + R E E E D
Sbjct: 109 ISDTR-RRDPEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGG 167
Query: 345 ------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT-NENVPKVAYEDEE 397
+ TR++V +GCL+G+GG II +MR T+ IRIL + N+P+ EE
Sbjct: 168 GGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEE 227
Query: 398 MVQITGSLDVASSALSQVTLRLRANTFEREGALAAH--------PPVLPYVPMSLD--IT 447
+VQI G + A++ V+ RLR + PP YVP +
Sbjct: 228 IVQIVGDTNAVKKAIAIVSSRLRESQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPM 287
Query: 448 DGSKYGNRDNQSRGRGNSYAT 468
DG + R + S RGN Y++
Sbjct: 288 DGRPFRPRMSASNTRGNDYSS 308
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 194/355 (54%), Gaps = 35/355 (9%)
Query: 113 AQDALFRVHDRIVAEDSLADD-----EFGELT-LITVRMLVPADQIGCVIGKGGQVIQNI 166
A A RV +R+V DD E E+T ++ RML Q+GCV+GKGG+ ++ +
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERM 137
Query: 167 RTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
R E+ AQIR+ ++ + +P CAL DEL+ ++G + RKAL+ +++ L +NP
Sbjct: 138 RQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPRLETSNFS 197
Query: 226 SSSSNIYQSSGV-------------YLSAPLVGSYG--NYSARRDEASAR-----EFSLR 265
+ S SGV YL P + Y N+S+ R E R
Sbjct: 198 TGRSFGPPGSGVGCPPGVDSHSQRSYLP-PHIPDYHARNFSSNVAAPGPRFFIEQEIVFR 256
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTI 324
++C +GG+IGKGG I+ ++ ++GAS+KV + A+ D+ +I IS +E E SP
Sbjct: 257 MICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISARENSEMMHSPAQ 316
Query: 325 TAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
A LR+ R SE + +S + R+LVPS IGCL+G+GG+II+EMR+ T ASIRI
Sbjct: 317 DAVLRVYSRISEASMDKSS--AVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFG 374
Query: 385 NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE----GALAAHPP 435
NE +P+ A ++E+VQ+TG+ AL +T R+R + G ++ +PP
Sbjct: 375 NEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRDVIIPPKPHPSGGMSPYPP 429
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 119/216 (55%), Gaps = 23/216 (10%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ V+R +C +G IIGKGG ++ L+S+T +++++ + V DER++ I S+ E +
Sbjct: 251 QEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVI-SARENSE 309
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ SPAQDA+ RV+ RI ++ + + + R+LVP+ IGC++GKGG
Sbjct: 310 MMH------SPAQDAVLRVYSRI------SEASMDKSSAVPARLLVPSQHIGCLLGKGGS 357
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
+I +R T A IRI +E +P CA DEL+QV G ++ AL+ I R+ +
Sbjct: 358 IIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIRD------ 411
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
+++ + SG P GS ++ +R+D A
Sbjct: 412 -VIIPPKPH---PSGGMSPYPPAGSTPHHPSRQDPA 443
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 248/505 (49%), Gaps = 101/505 (20%)
Query: 11 KRTHFQ-SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
KR Q +++ +N KRR D+ + E VYR LCP+ +G +IGK G+++ +
Sbjct: 314 KRKQIQRNNSESNRNQKRRISHDKINR----DELVVYRILCPIDVVGGVIGKSGKVINAI 369
Query: 70 RSETKSNIRISETVPGCDERIVTIYSS----SEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
R TK+ I++ + + GC +R++TIY S E + E + AQDAL +V+D IV
Sbjct: 370 RHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIV 429
Query: 126 AEDSLADDEFGELTLI------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
A +D+E T + R+LVP Q +IGK G+ I+ IR TRA ++++ K
Sbjct: 430 A----SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSK 485
Query: 179 DEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHE-NP-------SRSQHLLLSS- 227
D P +CA+ +D ++ ++GEP V++AL +++ +++ NP S SQ + +S
Sbjct: 486 DVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASV 545
Query: 228 ------SSNIYQSSGVYLSAPL-------VGSYGNYSARRD------------------- 255
S+++Y +G Y + V SY N + D
Sbjct: 546 IVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSL 605
Query: 256 --------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDD 306
+ + E +++CP NI VIGKGG IK+IR+ SG+ I+V DS GDD
Sbjct: 606 PVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDD 665
Query: 307 -CIIFISTKE-----------FFEDP----SPTITAALRLQPRCSEKTERESGDPVITTR 350
C+I ++ E F + P S + A L LQ +++ + +
Sbjct: 666 ECVIIVTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYINDEDAEN-----VKMQ 720
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+LV S IGC+IG+ G++I+E+R T A+I I + +++V+++G +
Sbjct: 721 LLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRD 772
Query: 411 ALSQVTLRLRANTFEREGALAAHPP 435
AL Q+ LRLR + + ++A P
Sbjct: 773 ALIQIVLRLREDVLGDKDSVATRKP 797
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 143/470 (30%), Positives = 231/470 (49%), Gaps = 64/470 (13%)
Query: 12 RTHFQSDAATNGGSKRRNPGD----ETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
R + T G + R G +T+Q + T YR LC K G +IGK G I+K
Sbjct: 25 RPRYNHHYTTAGNQRHRGGGAARHAKTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIK 84
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF--VSPAQDALFRVHDRIV 125
+R T + I + E +PG +ERI+ I T + G SPAQ+AL +H+RI+
Sbjct: 85 SIRQHTGAWINVHELMPGDEERIIEI----SDTRRRDPEGRMPSFSPAQEALLLIHERIL 140
Query: 126 AEDSL-----ADDEFGELTL-------ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
D+ D+E+G + R++V +GC++GKGG++I+ +R ET+ Q
Sbjct: 141 ESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQ 200
Query: 174 IRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ---HLLLSSSS 229
IRIL +D +LP C +E++QV G+ V+ ALV I+SRL E+ R + H + S
Sbjct: 201 IRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPE 260
Query: 230 NIYQSSGVYLSAPLVGSY------GNYSARRDEASAR----------------------- 260
+ Y+ GS ++ +R ++R
Sbjct: 261 RFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSRNNNHPSLSYAMEPGAAPVVDDAQ 320
Query: 261 -----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
E R++CP + +IG+ GI++ ++ E G +KV D+ II I+++E
Sbjct: 321 GFYGEELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEE 380
Query: 316 FFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+D P A L +Q R + D ITTR++VPS++I CL G+ + +SE+R
Sbjct: 381 GPDDELFPAQEALLHIQTRIVDLV--LDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRR 437
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
T A+I+IL +++P + +E+VQI G + A A+ +VT RLR+ +
Sbjct: 438 LTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLY 487
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 117/217 (53%), Gaps = 28/217 (12%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
+G E+ V+R LCP+ K+ IIG+ IV+ L+SE ++++++ V G DE+I+ I +S
Sbjct: 320 QGFYGEELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIII-TS 378
Query: 97 SEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
EG + LF PAQ+AL + RIV D + D + IT R++VP+ +I C
Sbjct: 379 EEGPDDELF--------PAQEALLHIQTRIV--DLVLDKD----NTITTRLVVPSSEIEC 424
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+ GK + IR T A I+IL + LPLC DEL+Q+ GE R A+V++ SRL
Sbjct: 425 LDGKDVS-LSEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLR 483
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
R + +Q + L APL G+ + S
Sbjct: 484 SYLYR----------DFFQRDPIPLPAPLPGAEASSS 510
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 121/278 (43%), Gaps = 44/278 (15%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
S R++C GGVIGK G IIK IRQ +GA I V ++ II IS DP
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRR-RDPEG 120
Query: 321 -----SPTITAALRLQPRCSEK----------------TERESGDPVITTRILVPSAQIG 359
SP A L + R E +G + TR++V +G
Sbjct: 121 RMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRMHVG 180
Query: 360 CLIGRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
CL+G+GG II +MR T+ IRIL + N+P+ EE+VQ+ G ++ +AL ++ R
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISSR 240
Query: 419 LRANTFEREGALA--AHPP---VLP---YVPMSL-----DITDGSKYGNRDNQSRGRGNS 465
LR + H P P YVP DG+ +G+R + + R N+
Sbjct: 241 LRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSRNNN 300
Query: 466 YATGNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGRGL 503
+ + SY G+ +A G YG+ R L
Sbjct: 301 HPSL------SYAMEPGAAPVVDDAQGFYGEELVFRIL 332
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 228/444 (51%), Gaps = 68/444 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E VPG ERI+ I +
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRR---- 123
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFG-----------------ELTLITVR 144
+ G SPAQ+ALF VHDRI+ ++ +FG + R
Sbjct: 124 DPDGRMPSFSPAQEALFSVHDRILESEA----QFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVR 203
++V +GC++GKGG++I+ +R ET+ IRIL ++ +LP C +E++Q+ GE V+
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVK 239
Query: 204 KALVQIASRLHENPSR----------SQHLLLSSSSNIY------QSSGVYLSAPLVGSY 247
AL ++SRL E+ R S +++ + Y QSS + G++
Sbjct: 240 NALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPR----GNF 295
Query: 248 --GNYSARR----DEASA---------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
N+S+R+ +EA A E +++CPA I V+G+ GII ++ E G
Sbjct: 296 RNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIG 355
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPS-PTITAALRLQPRCSEKTERESGDPVITTRI 351
++V A D+ II IS++E +DP P A L +Q + + D +ITTR+
Sbjct: 356 VDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIP--DKDNLITTRL 413
Query: 352 LVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
LVPS CL G+ G++ SE+ T S++IL E +P+ A ++ ++QITG + A A
Sbjct: 414 LVPSRDSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREA 472
Query: 412 LSQVTLRLRANTFEREGALAAHPP 435
L ++TL LR++ F +E + PP
Sbjct: 473 LVELTLLLRSHMF-KELSQKETPP 495
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 18/192 (9%)
Query: 22 NGGSKRRNPGDETEQRGIG----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
N S++ N +E +G SE+ V++ LCP KI ++G+ I+ L++E ++
Sbjct: 299 NFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDV 358
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
R+S+ V G DE+I+TI S + F PAQ+AL + +I+ D + D +
Sbjct: 359 RVSDPVAGSDEQIITISSEEAPDDPF-------FPAQEALLHIQTQII--DLIPDKD--- 406
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAG 197
LIT R+LVP+ C+ GK G V I T ++IL E +P CA D ++Q+ G
Sbjct: 407 -NLITTRLLVPSRDSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITG 464
Query: 198 EPAVVRKALVQI 209
E R+ALV++
Sbjct: 465 EIRAAREALVEL 476
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 110/257 (42%), Gaps = 32/257 (12%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
+ R++C GGVIGK G IIK IRQ +GA I V + II IS DP
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRR-RDPDG 127
Query: 321 -----SPTITAALRLQPRCSEKTER--ESGDP---------------VITTRILVPSAQI 358
SP A + R E + G P + TR++V +
Sbjct: 128 RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHV 187
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNE-NVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
GCL+G+GG II +MR T+ IRIL E N+P+ EE+VQI G L+ +AL+ V+
Sbjct: 188 GCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSS 247
Query: 418 RLRANTFEREGALA--AHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRD 475
RLR + +H P + D + + D RG ++ N R
Sbjct: 248 RLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRG---NFRNNNFSSRQ 304
Query: 476 S-YGSYGGSLSGGGNAY 491
S Y ++ G N Y
Sbjct: 305 SNYAEEAPAVPVGENVY 321
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 228/444 (51%), Gaps = 68/444 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E VPG ERI+ I +
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRR---- 123
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFG-----------------ELTLITVR 144
+ G SPAQ+ALF VHDRI+ ++ +FG + R
Sbjct: 124 DPDGRMPSFSPAQEALFSVHDRILESEA----QFGYGGPPPEEEEDYGGVRPGGGRVVTR 179
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVR 203
++V +GC++GKGG++I+ +R ET+ IRIL ++ +LP C +E++Q+ GE V+
Sbjct: 180 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVK 239
Query: 204 KALVQIASRLHENPSR----------SQHLLLSSSSNIY------QSSGVYLSAPLVGSY 247
AL ++SRL E+ R S +++ + Y QSS + G++
Sbjct: 240 NALAIVSSRLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPR----GNF 295
Query: 248 --GNYSARR----DEASA---------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
N+S+R+ +EA A E +++CPA I V+G+ GII ++ E G
Sbjct: 296 RNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIG 355
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPS-PTITAALRLQPRCSEKTERESGDPVITTRI 351
++V A D+ II IS++E +DP P A L +Q + + D +ITTR+
Sbjct: 356 VDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIP--DKDNLITTRL 413
Query: 352 LVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
LVPS CL G+ G++ SE+ T S++IL E +P+ A ++ ++QITG + A A
Sbjct: 414 LVPSRDSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREA 472
Query: 412 LSQVTLRLRANTFEREGALAAHPP 435
L ++TL LR++ F +E + PP
Sbjct: 473 LVELTLLLRSHMF-KELSQKETPP 495
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 18/192 (9%)
Query: 22 NGGSKRRNPGDETEQRGIG----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
N S++ N +E +G SE+ V++ LCP KI ++G+ I+ L++E ++
Sbjct: 299 NFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDV 358
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
R+S+ V G DE+I+TI S + F PAQ+AL + +I+ D + D +
Sbjct: 359 RVSDPVAGSDEQIITISSEEAPDDPF-------FPAQEALLHIQTQII--DLIPDKD--- 406
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAG 197
LIT R+LVP+ C+ GK G V I T ++IL E +P CA D ++Q+ G
Sbjct: 407 -NLITTRLLVPSRDSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITG 464
Query: 198 EPAVVRKALVQI 209
E R+ALV++
Sbjct: 465 EIRAAREALVEL 476
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 110/257 (42%), Gaps = 32/257 (12%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
+ R++C GGVIGK G IIK IRQ +GA I V + II IS DP
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRR-RDPDG 127
Query: 321 -----SPTITAALRLQPRCSEKTER--ESGDP---------------VITTRILVPSAQI 358
SP A + R E + G P + TR++V +
Sbjct: 128 RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHV 187
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNE-NVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
GCL+G+GG II +MR T+ IRIL E N+P+ EE+VQI G L+ +AL+ V+
Sbjct: 188 GCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSS 247
Query: 418 RLRANTFEREGALA--AHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRD 475
RLR + +H P + D + + D RG ++ N R
Sbjct: 248 RLRESQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRG---NFRNNNFSSRQ 304
Query: 476 S-YGSYGGSLSGGGNAY 491
S Y ++ G N Y
Sbjct: 305 SNYAEEAPAVPVGENVY 321
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 219/444 (49%), Gaps = 60/444 (13%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
YR LC K G +IGK G I+K +R T + I + E +PG +ERI+ I T +
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI----SDTRRRDP 117
Query: 106 SGEF--VSPAQDALFRVHDRIVAED-----------SLADDEFGEL--TLITVRMLVPAD 150
G SPAQ+ALF +HDRI+ D L +DE+ + R++V
Sbjct: 118 EGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRM 177
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAGEPAVVRKALVQI 209
+GC++GKGG++I+ +R ET+ QIRIL +H LP C +E++QV G+ + V+ A+ I
Sbjct: 178 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAII 237
Query: 210 ASRLHENPSRSQ---HLLLSSSSNIYQSS-GVYLSA--------PLVGSY--------GN 249
+SRL E+ R + H + S ++ +++ P GS N
Sbjct: 238 SSRLRESQHRDRSHFHGRVHSPERLFDDDYAPHMNTRRSSMDGPPSFGSRVPGSNYRNNN 297
Query: 250 YSARRDEASA----------------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
YS+R +A + R++CP + V+G+ GI+ ++ E G
Sbjct: 298 YSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGV 357
Query: 294 SIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRIL 352
+KV + D+ II I ++E +D P A L +Q R + D + TTR+L
Sbjct: 358 DVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIVDLV--PDNDHITTTRLL 415
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
V S++IGCL GR + +SE+ T A+I IL E +P +E+VQI G + A AL
Sbjct: 416 VRSSEIGCLEGRDAS-LSEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDAL 474
Query: 413 SQVTLRLRANTFEREGALAAHPPV 436
+VT RLR+ ++ PPV
Sbjct: 475 VEVTSRLRSYIYKDVFEKDLPPPV 498
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 23/209 (11%)
Query: 6 NINYGKRTH-FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGE 64
N NY R F +DA + + P ED V+R LCP+ K+ ++G+
Sbjct: 295 NNNYSSRASGFAADAGADPIADSAQP--------FYVEDLVFRILCPIDKLNRVVGESDG 346
Query: 65 IVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI 124
IV L++E ++++++ V G DE+I+TI+S E + + PAQ+AL + RI
Sbjct: 347 IVDLLQNEIGVDVKVADPVSGSDEQIITIFSE-------EGPDDELFPAQEALLHIQTRI 399
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
V D + D++ + T R+LV + +IGC+ G+ + I T A I IL E LP
Sbjct: 400 V--DLVPDNDH----ITTTRLLVRSSEIGCLEGRDAS-LSEIERLTGATIEILPKEKLPS 452
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRL 213
DE++Q+ GE R ALV++ SRL
Sbjct: 453 YLSGIDEIVQIEGEIRAARDALVEVTSRL 481
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
S R++C GGVIGK G IIK IRQ +GA I V ++ II IS DP
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTR-RRDPEG 119
Query: 321 -----SPTITAALRLQPRCSEK--------------TERE---SGDPVITTRILVPSAQI 358
SP A + R E E E G + TR++V +
Sbjct: 120 RMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHV 179
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNEN-VPKVAYEDEEMVQITGSLDVASSALSQVTL 417
GCL+G+GG II +MR T+ IRIL ++ +P+ EE+VQ+ G + +A++ ++
Sbjct: 180 GCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISS 239
Query: 418 RLR 420
RLR
Sbjct: 240 RLR 242
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI---SETVPGC-- 86
+E E G G R + +G ++GKGG+I++Q+R ETK+ IRI T+P C
Sbjct: 156 EEDEYVGRGGNRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVS 215
Query: 87 -DERIVTI 93
E IV +
Sbjct: 216 MSEEIVQV 223
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 207/419 (49%), Gaps = 49/419 (11%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
YR LCP +IG +IGK G ++K R+ET + ++++ T G DER++ + S + T + ED
Sbjct: 60 YRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPTTRGADERVILVASGDDLT-VGED 118
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEF---------------GELTLITVRMLVPAD 150
GE ++ A+ ALFR+ D I E+ + G T I R+LVP
Sbjct: 119 -GEGMTTAEVALFRIFDTITGEEGVTAARGGEGEGEGEASGGSTRGASTPI-CRLLVPRV 176
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP----------- 199
Q+G +IGKGG VI IR + A +R++ LP CA DELLQ+
Sbjct: 177 QVGSLIGKGGTVISAIRASSGATVRVMPANMLPACASQGDELLQITAPSRDADGAERDQK 236
Query: 200 ---AVVRKALVQIASRLHENPS--------RSQHLLLSSSSNIYQSSGVYLSAPLVGSYG 248
A V+ AL IA L E PS RS + +GV +P + G
Sbjct: 237 LSMASVKNALRMIAKHLREYPSKNAATESNRSPFEAFMIGNKTAPHAGV--ESPGAKNGG 294
Query: 249 NYSARRD-----EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
+ S R + E + RL+CP G VIG+ G +I+QIR ++GA +KV
Sbjct: 295 HMSTRMNLNGVYVPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNG 354
Query: 304 GDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
++ II +S+ + P AL RC E + + R+LV ++QIGCLIG
Sbjct: 355 AEERIICVSSSDDGLAPMLAAQVALFRVYRC--IVESAGNEIPLPFRLLVQTSQIGCLIG 412
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
+GG+II ++R+ T A++R+L +E +P A +DE + D + + V+ RLR N
Sbjct: 413 KGGSIIKQIRNETGATVRVLPSEALPSCANDDELLEIGQWPADACALGIRIVSGRLRGN 471
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 148/290 (51%), Gaps = 50/290 (17%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G + +R LCP+ K GS+IG+ GE+++Q+RS+T + +++ E V G +ERI+ + SS +G
Sbjct: 309 GGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSSDDG 368
Query: 100 TNLFEDSGEFVSP---AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++P AQ ALFRV+ IV + G + R+LV QIGC+I
Sbjct: 369 ----------LAPMLAAQVALFRVYRCIV-------ESAGNEIPLPFRLLVQTSQIGCLI 411
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS-RLHE 215
GKGG +I+ IR ET A +R+L E LP CA + DELL++ PA ++I S RL
Sbjct: 412 GKGGSIIKQIRNETGATVRVLPSEALPSCA-NDDELLEIGQWPADACALGIRIVSGRLRG 470
Query: 216 NPSRSQHLLLSSSSNIYQSS-----GVYLSAPLV------GSYGN-----YSARRDEASA 259
N L+S+++ + + A L+ +YG+ S + A
Sbjct: 471 NIRHKAAERLTSTADAQNTQTMGFDATWQQAELIPYGMTQTAYGSPETVMMSKTKSTGGA 530
Query: 260 RE------------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R S+++ + +IG V+G+GG I RQ SGA IK+
Sbjct: 531 RAPPVEIAPGVSVVNSVQMAISSQHIGSVLGRGGCNISLARQVSGARIKL 580
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 228/443 (51%), Gaps = 67/443 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC K G +IGK G I+K +R T + I + E VPG ERI+ I +
Sbjct: 69 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEISDNRRR---- 124
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFG-----------------ELTLITVR 144
+ G SPAQ+ALF VHDRI+ ++ +FG + R
Sbjct: 125 DPDGRMPSFSPAQEALFNVHDRILE----SEPQFGYGGAQPEEEEDYGGVRPGGGRVVTR 180
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVR 203
++V +GC++GKGG++I+ +R ET+ IRIL ++ +LP C +E++Q+ GE + V+
Sbjct: 181 LVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVK 240
Query: 204 KALVQIASRLHENPSR----------SQHLLLSSSSNIY-----QSSGVYLSAPLVGSY- 247
AL+ ++SRL E+ R S +++ + Y QSS + G+Y
Sbjct: 241 NALLIVSSRLRESQHRDRSNFQGRSHSPERQFAAAGDDYIPQRRQSSDRFPR----GNYR 296
Query: 248 -GNYSARR----DEASA---------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
N+S+R+ +EA A E +++CPA I V+G+ GI+ ++ E G
Sbjct: 297 NNNFSSRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGV 356
Query: 294 SIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRIL 352
++V D+ II IS++E +DP P A L +Q + + D +ITTR+L
Sbjct: 357 DVRVSDPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLL--PDKDNLITTRLL 414
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
V S CL G+ G+ +SE+ T S++IL E +P+ A ++ ++QITG + A AL
Sbjct: 415 VSSRDSVCLEGKAGS-VSEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDAL 473
Query: 413 SQVTLRLRANTFEREGALAAHPP 435
++TL LR++ F +E + PP
Sbjct: 474 VELTLLLRSHMF-KELSQKETPP 495
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 214/428 (50%), Gaps = 48/428 (11%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-GCDERIVTIYSSS- 97
+E +R LCP + G+IIGKGG +++ L+S T S IR+ + +P +ER+V I + S
Sbjct: 15 AAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 98 ---EGTNLFE-----------------------DSGEFVSPAQDALFRVHDRIVAEDSLA 131
+ +N+ + D E S AQ AL RV +RIV D A
Sbjct: 75 KKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAA 134
Query: 132 DDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+ EL + RM+V +Q+ ++ KGG++IQ IR ++ A +RI + +P CA
Sbjct: 135 TVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAF 194
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHEN---PSRSQHLLLSSSSNIYQSSGVYLSA--- 241
D ++Q+ G+ + V+KAL+ + + L E+ P+ + S Y
Sbjct: 195 PGDVVIQMNGKFSSVKKALLLVTNCLQESGAPPTWDECPFPQPGYPPEYHSMEYHPQWDH 254
Query: 242 ----PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P+ G ++ E E + RL+CPA +G +IGKGG +++ ++ ESGASIKV
Sbjct: 255 PPPNPMPEDVGPFNRPVVE---EEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKV 311
Query: 298 DSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
+ ++ II IS +E E S +R+ R E S + R+LV S
Sbjct: 312 SDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIGFEPSA--AVVARLLVHSP 369
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
IG L+G+GG +ISEMR AT ASIR+ + K + +E+VQ+ G+L AL Q+
Sbjct: 370 YIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQIL 429
Query: 417 LRLRANTF 424
RLR F
Sbjct: 430 CRLREAMF 437
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
R + E+ +R LCP K+GS+IGKGG +V+ L++E+ ++I++S+ +ERI+ I +
Sbjct: 269 RPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISAR 328
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E+ S AQD + RVH+RIV + F + R+LV + IG ++
Sbjct: 329 -------ENLERRHSLAQDGVMRVHNRIV------EIGFEPSAAVVARLLVHSPYIGRLL 375
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
GKGG +I +R T A IR+ + DE++QV G V+ AL QI RL E
Sbjct: 376 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLRE 434
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 91/229 (39%), Gaps = 53/229 (23%)
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----------------DSSG 301
+A RL+CPA G +IGKGG +I+ ++ +G+ I+V SG
Sbjct: 15 AAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 302 AEGDDCIIFISTKEFFEDP--------------------SPTITAALRLQPR-------- 333
+ D+ + S E+P S A LR+ R
Sbjct: 75 KKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAA 134
Query: 334 CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
+ E + G+ R++V Q+ L+ +GG +I ++R + A +RI + + +P A+
Sbjct: 135 TVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAF 194
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPM 442
+ ++Q+ G AL VT N + GA PP P
Sbjct: 195 PGDVVIQMNGKFSSVKKALLLVT-----NCLQESGA----PPTWDECPF 234
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 220/446 (49%), Gaps = 65/446 (14%)
Query: 33 ETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVT 92
+T+Q + T YR LC K G +IGK G I+K +R T + I + E +PG +ERI+
Sbjct: 50 KTQQDSPLTVTTSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIE 109
Query: 93 IYSSSEGTNLFEDSGEF--VSPAQDALFRVHDRIVAEDSLADDEFG-------------E 137
I T + G SPAQ+AL +H+RI+ D+ FG
Sbjct: 110 I----SDTRRRDPEGRMPSFSPAQEALLLIHERILESDA----AFGVAEEDEEYGGRGGG 161
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVA 196
I R++V +GC++GKGG++I+ +R ET+ QIRIL +D +LP C +E++QV
Sbjct: 162 RDRIATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVV 221
Query: 197 GEPAVVRKALVQIASRLHENPSRSQ---HLLLSSSSNIYQSSGVYLSAPLVG-------- 245
G V+ ALV I+SRL E+ R + H + S + Y+ G
Sbjct: 222 GNVNAVKNALVIISSRLRESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDG 281
Query: 246 -SYG----------------NYSARR------DEAS---AREFSLRLVCPAGNIGGVIGK 279
S+G NY+ D+A E R++CP + +IG+
Sbjct: 282 ASFGSRGSNTNSRNNNHPSLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGE 341
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKT 338
GI++ ++ E G +KV D+ II I+++E +D P A L +Q R +
Sbjct: 342 SEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDLV 401
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
D ITTR++VPS++I CL G+ + +SE+R T A+I+IL + +P + +E+
Sbjct: 402 --LDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKTDEL 458
Query: 399 VQITGSLDVASSALSQVTLRLRANTF 424
VQI G + A A+ +VT RLR+ +
Sbjct: 459 VQIVGEIKAARDAVVEVTSRLRSYLY 484
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 28/217 (12%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
+G E+ V+R LCP+ K+ IIG+ IV+ L++E ++++++ V G DE+I+ I +S
Sbjct: 317 QGFYGEELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIII-TS 375
Query: 97 SEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
EG + LF PAQ+AL V RIV D + D + IT R++VP+ +I C
Sbjct: 376 EEGPDDELF--------PAQEALLHVQTRIV--DLVLDKD----NTITTRLVVPSSEIEC 421
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+ GK + IR T A I+IL + LPLC DEL+Q+ GE R A+V++ SRL
Sbjct: 422 LDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSRLR 480
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
R + +Q V L APL G+ + S
Sbjct: 481 SYLYR----------DFFQRDTVPLPAPLPGAAASSS 507
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 122/275 (44%), Gaps = 41/275 (14%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-- 320
S R++C GGVIGK G IIK IRQ +GA I V ++ II IS DP
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRR-RDPEG 120
Query: 321 -----SPTITAALRLQPRCSEK-------------TERESGDPVITTRILVPSAQIGCLI 362
SP A L + R E R G I TR++V +GCL+
Sbjct: 121 RMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVGCLL 180
Query: 363 GRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
G+GG II +MR T+ IRIL + N+P+ EE+VQ+ G+++ +AL ++ RLR
Sbjct: 181 GKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSRLRE 240
Query: 422 NTFEREGALA--AHPP---VLP---YVPMSL-----DITDGSKYGNRDNQSRGRGNSYAT 468
+ H P P YVP DG+ +G+R + + R N++ +
Sbjct: 241 SQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSRNNNHPS 300
Query: 469 GNLPGRDSYGSYGGSLSGGGNAYGAYGDHSSGRGL 503
N Y G+ +A G YG+ R L
Sbjct: 301 LN------YAMEPGAAPVVDDAQGFYGEELVFRIL 329
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 202/392 (51%), Gaps = 53/392 (13%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
+ D V+R +CP K + GG+ K L E + G +ER+V I
Sbjct: 15 AAPDAVFRIVCPAAKTADVAAIGGDGAKIL----------VEDLVGAEERVVVIVGDE-- 62
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
S AQ AL RV +R + DE + + ++ +++ P+ Q+GCV+G+G
Sbjct: 63 -----------SAAQVALIRVLERTM-------DEETKNSTVSCKLVAPSYQVGCVLGRG 104
Query: 160 GQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
G++++ IR ++ A IR+L KD+ DE +Q+ G V+KA++ +++ LHEN
Sbjct: 105 GKIVEKIRQDSGAHIRVLPKDQ---PPPPPGDEFIQITGNFGAVKKAVLSVSACLHEN-- 159
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS-----LRLVCPAGNI 273
+ S G + P S G YS +S R F +L+C +
Sbjct: 160 --------NYGAFKPSGGGSYAPPDHHSRGAYSESAGHSSHRMFVEEEVVFKLLCRHDKV 211
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQP 332
G +IGKGG +++ ++ E+GASI++ +G + D+ ++ IS +E E SP A +R+
Sbjct: 212 GSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHC 271
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
R +E S + ++LV S Q+GCL+G+GG +ISEMR AT ASIRI + E + K
Sbjct: 272 RLTEIGFEPSA--AVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQI-KYI 328
Query: 393 YEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
++EE+VQ+ GSL AL +T R+R F
Sbjct: 329 SQNEEVVQVIGSLQSVQDALFHITNRIRETIF 360
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 212/429 (49%), Gaps = 49/429 (11%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-GCDERIVTIYSSS- 97
+E +R LCP + G+IIGKGG +++ L+S T S IR+ + +P +ER+V I + S
Sbjct: 15 AAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 98 ---EGTNLFE-----------------------DSGEFVSPAQDALFRVHDRIVAEDSLA 131
+ +N+F+ D E S AQ AL RV +RIV D A
Sbjct: 75 KKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAA 134
Query: 132 DDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+ L + RM+V +Q+ ++ KGG++IQ IR ++ A +RI + +P CA
Sbjct: 135 SVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAF 194
Query: 188 SFDELLQ--VAGEPAVVRKALVQIASRLHEN---------PSRSQHLLLSSSSNIYQSSG 236
D ++Q + G+ + V+KAL+ I + L E+ P S Y
Sbjct: 195 PGDVVIQMKITGKFSSVKKALLLITNCLQESGAPPTWDECPFPQPGYPPDYHSMEYHPQW 254
Query: 237 VYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
+ P+ ++ E E S RL+CPA +G +IGKGG +++ ++ ESGASIK
Sbjct: 255 DHPPNPMPEDVVPFNRPVVE---EEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIK 311
Query: 297 VDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPS 355
V + ++ II IS +E E S +R+ R E S + R+LV S
Sbjct: 312 VSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNRIVEIGFEPSA--AVVARLLVHS 369
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
IG L+G+GG +ISEMR AT ASIR+ + K + +E+VQ+ G+L AL Q+
Sbjct: 370 PYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQI 429
Query: 416 TLRLRANTF 424
RLR F
Sbjct: 430 LCRLREAMF 438
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
R + E+ +R LCP K+GS+IGKGG +V+ L++E+ ++I++S+ +ERI+ I +
Sbjct: 270 RPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISAR 329
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E+ S AQD + RVH+RIV + F + R+LV + IG ++
Sbjct: 330 -------ENLERRHSLAQDGVMRVHNRIV------EIGFEPSAAVVARLLVHSPYIGRLL 376
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
GKGG +I +R T A IR+ + DE++QV G V+ AL QI RL E
Sbjct: 377 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLRE 435
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 92/236 (38%), Gaps = 65/236 (27%)
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----------------DSSG 301
+A RL+CPA G +IGKGG +I+ ++ +G+ I+V SG
Sbjct: 15 AAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 302 AEGDDCIIFISTKEFFEDP--------------------SPTITAALRLQPRCS------ 335
+ DD +F S E+P S A LR+ R
Sbjct: 75 KKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAA 134
Query: 336 -------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
+K E ES R++V Q+ L+ +GG +I +R + A +RI + + +
Sbjct: 135 SVDGDGLDKGESES-----LCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQI 189
Query: 389 PKVAYEDEEMVQ--ITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPM 442
P A+ + ++Q ITG AL +T N + GA PP P
Sbjct: 190 PPCAFPGDVVIQMKITGKFSSVKKALLLIT-----NCLQESGA----PPTWDECPF 236
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 213/445 (47%), Gaps = 82/445 (18%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LCP+ +IG +IGK G ++K LR+ET + ++++ T G DER+V + S G L D
Sbjct: 72 FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVAS---GEELMMD 128
Query: 106 SGEF----VSPAQDALFRVHDRIVAEDSLADD-------------------------EFG 136
G+ V+ A+ ALFR+ D + +E A D G
Sbjct: 129 DGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNG 188
Query: 137 ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVA 196
+ R+LVP Q+G +IGKGG VI IR + A +R++ LP CA DELLQ+
Sbjct: 189 GRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQIT 248
Query: 197 GEP------------AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
A V+ AL +A L E P++ ++S ++S L A ++
Sbjct: 249 APVRDTDGNDVDLALASVKSALRMVAKNLREYPTKM------ATSESFRSP---LEAFML 299
Query: 245 G---------------------SYGNYSARRD-----EASAREFSLRLVCPAGNIGGVIG 278
G S G+ S R + E RL+CP G VIG
Sbjct: 300 GIKPGANADGDGGNGAGIAGGSSGGHMSTRMNLNGVYVPGGTEIMFRLLCPVSKTGSVIG 359
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
+ G +I+QIR E+GA +KV ++ II +S+ + P AL RC
Sbjct: 360 RNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDGLAPMLAAQVALFRVYRC--IV 417
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
+ D + R+LV ++QIGCLIG+GG+II ++R+ T A++R+L ++ +P A D+E+
Sbjct: 418 DSSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGATVRVLPSDALPACANADDEL 477
Query: 399 VQI-TGSLDVASSALSQVTLRLRAN 422
++I D + + V+ RLR N
Sbjct: 478 LEIGQWPADACALGIRIVSGRLRGN 502
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 48/289 (16%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G + ++R LCP+ K GS+IG+ GE+++Q+RSET + +++ E + +ERI+ + S+ +G
Sbjct: 339 GGTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSNDDG 398
Query: 100 TNLFEDSGEFVSP---AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++P AQ ALFRV+ IV D G + R+LV QIGC+I
Sbjct: 399 ----------LAPMLAAQVALFRVYRCIV-------DSSGSDVPLPFRLLVQTSQIGCLI 441
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS-RLHE 215
GKGG +I+ IR ET A +R+L + LP CA + DELL++ PA ++I S RL
Sbjct: 442 GKGGSIIRQIRNETGATVRVLPSDALPACANADDELLEIGQWPADACALGIRIVSGRLRG 501
Query: 216 NPSRSQHLLLSSSSNIYQSSGV---------YLSAPLVGSYGNYSARRDEASAREFSLRL 266
N L+ SN+Y +S L + YG + + SL L
Sbjct: 502 NMRHKAAERLNVESNVYSASMTPTMAVQDTPTLQQSELMMYGMTAYETEPVDTALASLSL 561
Query: 267 VCP------------------AGNIGGVIGKGGGIIKQIRQESGASIKV 297
P + +IG V+G+GG I RQ SGA IK+
Sbjct: 562 SAPPVEIPGVTTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARIKL 610
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 20/168 (11%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-----KDEHLPLCALSFDELLQV 195
+ R+L P +IG VIGK G+VI+ +R ET A++++ DE + L A S +EL+
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVA-SGEELMMD 128
Query: 196 AGEPAVV-----RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNY 250
G+ + V +AL +I S S L + SG P S G
Sbjct: 129 DGDGSDVPVTTAERALFRI---FDTVASESGGALDGTRDGTSSESGS--GVPESSSTG-- 181
Query: 251 SARRDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R R + RL+ P +G +IGKGG +I IR SGA++++
Sbjct: 182 -GERSMNGGRAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRL 228
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 173/322 (53%), Gaps = 22/322 (6%)
Query: 119 RVHDRIVAEDSLADDEFGELT-----LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
R +R+V D+ GE ++ RML + Q+GCV+GKGG+ ++ +R E+ AQ
Sbjct: 83 RAWERVVGHRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQ 142
Query: 174 IRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
IR+ ++ + LP A DEL+ ++G + VRKAL+ + + L +NP
Sbjct: 143 IRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDASNFPPGRFGPP 202
Query: 233 QSSGV-------YLSAPLVGSYG-NYSARRDEASAR-----EFSLRLVCPAGNIGGVIGK 279
G+ YL + + NYS+ R E R++C +G +IGK
Sbjct: 203 GPVGIDPHSQRGYLPPSMPDYHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGK 262
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKT 338
GG I+ ++ E+GASIK+ ++ ++ +I IS E E SP A LR+ R SE +
Sbjct: 263 GGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESS 322
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
+S +T R+LVPS IGCL+G+GG+II+EMR T A IRI NE +P+ A ++E+
Sbjct: 323 MDKSS--AVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDEL 380
Query: 399 VQITGSLDVASSALSQVTLRLR 420
VQ+TGS AL +T R+R
Sbjct: 381 VQVTGSFQSIQDALLHITGRIR 402
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 13/174 (7%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ V+R +C +GSIIGKGG ++ L+SET ++I+I E +ER++ I +
Sbjct: 243 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISA------ 296
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
E+S SPAQDA+ RVH RI ++ + + +T R+LVP+ IGC++GKGG
Sbjct: 297 -HENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 349
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+I +R T A IRI +E +P CA DEL+QV G ++ AL+ I R+ +
Sbjct: 350 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 403
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN-ENVPKVAYEDEEMVQITGS 404
V+ R+L S Q+GC++G+GG + MR + A IR+ N + +P A +E++ I+G+
Sbjct: 109 VVGCRMLAASGQVGCVLGKGGKTVERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGN 168
Query: 405 LDVASSALSQVTLRLRAN 422
AL VT L+ N
Sbjct: 169 FSAVRKALLLVTTCLQDN 186
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 225/443 (50%), Gaps = 74/443 (16%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS-SEGTNLFE 104
+R LC +IG +IGK G I+K L+ +T + +RI + +R++T+ ++ +F
Sbjct: 38 FRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFS 97
Query: 105 --DSGEFVSPAQDALFRVHDRIV---AE-DSLADDEFGELTLITVRMLVPADQIGCVIGK 158
+S VS Q+AL RV +RI+ AE DS+AD +++ RML +G VIGK
Sbjct: 98 RIESAVEVSKGQEALVRVFERILEVAAESDSVADG------VVSCRMLAEVSSVGAVIGK 151
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG+V++ IR + +I++L D+ LP CA S +E++++ G+ + V+K LV ++ L +
Sbjct: 152 GGKVVEKIRKDCGCRIKVLVDK-LPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQDCQP 210
Query: 219 RSQHLLLSSSS-------------------------NIYQSSGVYLSAP--------LVG 245
+ + +S I Q+S V + P +
Sbjct: 211 VDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHSLGLPTIPK 270
Query: 246 SYGNYSAR-------------RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
S NY++R D ++ R++C IGGVIGKGG I++ ++ E+G
Sbjct: 271 SSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGGVIGKGGNIVRALQNETG 330
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALR----LQPRCSEKTERESGDP--- 345
A+I V + +E D+ +I ++ E +P +AA + + R E + DP
Sbjct: 331 AAISVGPTVSECDERLITVTASE---NPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSS 387
Query: 346 ---VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQI 401
+T R++V +Q+GCL+G+GG IISEMR AT SIRI+ ++ PK E + +V+I
Sbjct: 388 RGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEI 447
Query: 402 TGSLDVASSALSQVTLRLRANTF 424
+G A+ VT RLR N F
Sbjct: 448 SGDFVNVKDAIYHVTGRLRDNLF 470
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 28/220 (12%)
Query: 4 QSNINYGKRTH---FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
+S+INY R H +SD P Q+ V+R LC +IG +IG
Sbjct: 270 KSSINYASRVHPLSLESDRVVT-------PDTNIPQQ------LVFRILCTTDRIGGVIG 316
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
KGG IV+ L++ET + I + TV CDER++T+ +S E+ S AQ + V
Sbjct: 317 KGGNIVRALQNETGAAISVGPTVSECDERLITVTAS-------ENPESRYSAAQKTIVLV 369
Query: 121 HDRIVA---EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
R V E L D + +T R++V Q+GC++GKGG +I +R T IRI+
Sbjct: 370 FSRAVESGIEKGL-DPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRII 428
Query: 178 K-DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
D+ P C D +++++G+ V+ A+ + RL +N
Sbjct: 429 VGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDN 468
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 90/168 (53%), Gaps = 14/168 (8%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI---------- 311
S RL+C A IGGVIGK G IIK ++Q++GA ++++ + ++ D +I +
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVV 95
Query: 312 -STKEFFEDPSPTITAALRLQPRCSE-KTERES-GDPVITTRILVPSAQIGCLIGRGGAI 368
S E + S A +R+ R E E +S D V++ R+L + +G +IG+GG +
Sbjct: 96 FSRIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKV 155
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+ ++R I++L ++ +P A +EEM++I G + L V+
Sbjct: 156 VEKIRKDCGCRIKVLVDK-LPDCAASNEEMIEIEGDVSAVKKGLVAVS 202
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 27/159 (16%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
++ R+L A +IG VIGK G +I+ ++ +T A++RI E P + S D ++ V G
Sbjct: 36 VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRI---EDAP--SDSPDRVITVIG--P 88
Query: 201 VVRKALV--QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+ + A+V +I S + S+ Q L+ I + +A D +
Sbjct: 89 ITQSAVVFSRIESAVEV--SKGQEALVRVFERILE----------------VAAESDSVA 130
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S R++ ++G VIGKGG ++++IR++ G IKV
Sbjct: 131 DGVVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCRIKV 169
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 200/392 (51%), Gaps = 59/392 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
+ D V+R +CP K + GG+ K L + S +ER+V I
Sbjct: 15 AAPDAVFRIVCPAAKTEDVATIGGDGAKILVEDLVS----------AEERVVVIVGEE-- 62
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
S AQ AL RV +R V DE + + ++ +++ P+ Q+GCV+G+G
Sbjct: 63 -----------SAAQVALVRVFERTV-------DEETKNSTVSCKLVAPSYQVGCVLGRG 104
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G++++ IR +T A IR+L + PL +E +Q+ G V+KA++ +++ ++N
Sbjct: 105 GKIVEKIRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDN--- 161
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPL-VGSYGNYSARRDEASAREF-----SLRLVCPAGNI 273
+SG + PL S G YS +S R F +L+C +
Sbjct: 162 --------------NSGAF--KPLDHHSRGCYSESAGHSSHRMFLEEDVVFKLLCHHEKV 205
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQP 332
G +IGKGG +++ ++ E+GASI++ +G + D+ ++ IS +E E SP A +R+
Sbjct: 206 GSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHC 265
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
R +E S + ++LV S Q+GCL+G+GG +ISEMR T ASIRI + E + K
Sbjct: 266 RLTEIGFEPSA--AVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQI-KYI 322
Query: 393 YEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
++EE+VQ+ GSL AL +T R+R F
Sbjct: 323 SQNEEVVQVIGSLQSVQDALFHITSRIRETIF 354
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 211/431 (48%), Gaps = 61/431 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T +R LCP K+ G + ++R +T + + I PG R++ +S+G
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 104 ED-SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----------LITVRMLVPADQI 152
D SPAQ+AL VH RI+ + DE GE +T R++VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 153 GCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
GC++GKGG++I+ +R ET+ IRIL +D+H P C +E++QV GE V+KA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 212 RLHENPSRSQH----LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD--------EASA 259
RL E+ R + + S Q Y A + +Y R D E
Sbjct: 259 RLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQQMPAYEEPYGRPDQIRNNTSMEPPG 318
Query: 260 REFS------------------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
EF R++CP+ + ++G G+++ ++++ G I++ S
Sbjct: 319 YEFDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSL 378
Query: 302 AEGDDCIIFISTKE-----FFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
D+ II I+++E F P A L LQ + + D +ITTR+LVPS+
Sbjct: 379 DGSDERIIIITSREGPDHELF----PAQEALLHLQTHIVDLGPDK--DNIITTRLLVPSS 432
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+I C GR G++ S+++ T A+++IL + +P A E +E++QI G + A AL Q+T
Sbjct: 433 EIACFEGRDGSL-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQIT 491
Query: 417 LRLRANTFERE 427
+LR+ F RE
Sbjct: 492 AKLRS-YFYRE 501
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 25/195 (12%)
Query: 21 TNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
+NGG D TE I +D ++R LCP K+ S++G +++ L+ + +IR++
Sbjct: 323 SNGGKI----NDHTE---ILFDDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLT 375
Query: 81 ETVPGCDERIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL 138
+++ G DERI+ I +S EG + LF PAQ+AL + IV D+
Sbjct: 376 DSLDGSDERIIII-TSREGPDHELF--------PAQEALLHLQTHIVDLGPDKDN----- 421
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+IT R+LVP+ +I C G+ G + +I+ +T A ++IL + LP CAL DEL+Q+ GE
Sbjct: 422 -IITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQIVGE 479
Query: 199 PAVVRKALVQIASRL 213
R ALVQI ++L
Sbjct: 480 IRAARDALVQITAKL 494
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-----KEFF 317
S R++CP V G I ++R ++ A + + D + I T +E
Sbjct: 86 SFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYP--GDAVRVIETSDGARREAD 140
Query: 318 EDP---SPTITAALRLQPRCSEKTERESGDP---------------VITTRILVPSAQIG 359
P SP A L + R E TE + GD +TTR++VP +G
Sbjct: 141 GRPPSFSPAQEALLMVHRRILE-TEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVG 199
Query: 360 CLIGRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
CL+G+GG II +MR+ T+ IRIL +++ P+ EE+VQ+ G + A++ ++ R
Sbjct: 200 CLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDR 259
Query: 419 LRANTFEREGAL 430
L+ + G
Sbjct: 260 LKESLHRDRGPF 271
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 182/354 (51%), Gaps = 37/354 (10%)
Query: 116 ALFRVHDRIVAEDSLADDEFG------ELT-LITVRMLVPADQIGCVIGKGGQVIQNIRT 168
A R + +V D+ G E+T + RML Q+GCV+GKGG+ ++ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 169 ETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
E AQIR+ ++ E LP A DEL+ ++G + VRKAL+ +++ L +NP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 228 SSNIYQSSGV-------------YLSAPLVGSYG--NYSARRDEASAR-----EFSLRLV 267
SG YL P + Y NY + R E R++
Sbjct: 197 RPFGLPGSGTGCPPGMDPHSQRSYL-PPHIPDYHTRNYPSNAGPPGPRFFFEQEIVFRMI 255
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITA 326
+G +IGKGG I+ ++ E+GA IK+ A+ D+ ++ I+ +E + SP A
Sbjct: 256 ILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDA 315
Query: 327 ALRLQPRCSEKT-ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
+R+ R SE + +R S P R+LVPS IGCL+G+GG+IISEMR T A+IRI N
Sbjct: 316 VVRVYSRISEASIDRSSHTP---ARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGN 372
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE---GALAAHPPV 436
E +P+ A ++EMVQ+TGS AL +T R+R + G + +PPV
Sbjct: 373 EQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPV 426
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 71/380 (18%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
R ++ V+R + +GSIIGKGG ++ L+SET + I+I E V DER+V I +
Sbjct: 243 RFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAR 302
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E+S SPAQDA+ RV+ RI ++ + R+LVP+ IGC++
Sbjct: 303 -------ENSDMLHSPAQDAVVRVYSRI------SEASIDRSSHTPARLLVPSQHIGCLL 349
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG +I +R T A IRI +E +P CA DE++QV G ++ AL+ I R+ +
Sbjct: 350 GKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD- 408
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR--------EFSLRLVC 268
++L SG P VG+ + +R+++ + +
Sbjct: 409 ------VILPKP----HPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFR 458
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI------STKEFFEDPSP 322
P +G V S G D + ++ + F E PSP
Sbjct: 459 PDAPMG-----------HFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSP 507
Query: 323 TITAALRLQPRCSEKTERESGD--------------------PVITTRILVPSAQIGCLI 362
PR + + R D P TT +++P IG +
Sbjct: 508 RTCPP--EAPRTNSEVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVC 565
Query: 363 GRGGAIISEMRSATRASIRI 382
G G+ I E+ + ASI +
Sbjct: 566 GNNGSEIEEIEKMSGASITV 585
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 182/354 (51%), Gaps = 37/354 (10%)
Query: 116 ALFRVHDRIVAEDSLADDEFG------ELT-LITVRMLVPADQIGCVIGKGGQVIQNIRT 168
A R + +V D+ G E+T + RML Q+GCV+GKGG+ ++ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 169 ETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
E AQIR+ ++ E LP A DEL+ ++G + VRKAL+ +++ L +NP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 228 SSNIYQSSGV-------------YLSAPLVGSYG--NYSARRDEASAR-----EFSLRLV 267
SG YL P + Y NY + R E R++
Sbjct: 197 RPFGLPGSGTGCPPGMDPHSQRSYL-PPHIPDYHTRNYPSNAGPPGPRFFFEQEIVFRMI 255
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITA 326
+G +IGKGG I+ ++ E+GA IK+ A+ D+ ++ I+ +E + SP A
Sbjct: 256 ILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITARENSDMLHSPAQDA 315
Query: 327 ALRLQPRCSEKT-ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
+R+ R SE + +R S P R+LVPS IGCL+G+GG+IISEMR T A+IRI N
Sbjct: 316 VVRVYSRISEASIDRSSHTP---ARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGN 372
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE---GALAAHPPV 436
E +P+ A ++EMVQ+TGS AL +T R+R + G + +PPV
Sbjct: 373 EQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPV 426
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 160/380 (42%), Gaps = 71/380 (18%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
R ++ V+R + +GSIIGKGG ++ L+SET + I+I E V DER+V I +
Sbjct: 243 RFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAR 302
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E+S SPAQDA+ RV+ RI ++ + R+LVP+ IGC++
Sbjct: 303 -------ENSDMLHSPAQDAVVRVYSRI------SEASIDRSSHTPARLLVPSQHIGCLL 349
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG +I +R T A IRI +E +P CA DE++QV G ++ AL+ I R+ +
Sbjct: 350 GKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD- 408
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR--------EFSLRLVC 268
++L SG P VG+ + +R+++ + +
Sbjct: 409 ------VILPKP----HPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFR 458
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI------STKEFFEDPSP 322
P +G V S G D + ++ + F E PSP
Sbjct: 459 PDAPMG-----------HFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSP 507
Query: 323 TITAALRLQPRCSEKTERESGD--------------------PVITTRILVPSAQIGCLI 362
PR + + R D P TT +++P IG +
Sbjct: 508 RTCPP--EAPRTNSEVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVC 565
Query: 363 GRGGAIISEMRSATRASIRI 382
G G+ I E+ + ASI +
Sbjct: 566 GNNGSEIEEIEKMSGASITV 585
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 211/431 (48%), Gaps = 61/431 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T +R LCP K+ G + ++R +T + + I PG R++ +S+G
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 104 ED-SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----------LITVRMLVPADQI 152
D SPAQ+AL VH RI+ + DE GE +T R++VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 153 GCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
GC++GKGG++I+ +R ET+ IRIL +D+H P C +E++QV GE V+KA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 212 RLHENPSRSQH----LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD--------EASA 259
RL E+ R + + S Q Y A + +Y R D E
Sbjct: 259 RLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQQMPAYEEPYGRPDQIRNNTSMELPG 318
Query: 260 REFS------------------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
EF R++CP+ + ++G G+++ ++++ G I++ S
Sbjct: 319 YEFDSNGGKINDHTEILFDDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSL 378
Query: 302 AEGDDCIIFISTKE-----FFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
D+ II I+++E F P A L LQ + + D +ITTR+LVPS+
Sbjct: 379 DGSDERIIIITSREGPDHELF----PAQEALLHLQTHIVDLGPDK--DNIITTRLLVPSS 432
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+I C GR G++ S+++ T A+++IL + +P A E +E++QI G + A AL Q+T
Sbjct: 433 EIACFEGRDGSL-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQIT 491
Query: 417 LRLRANTFERE 427
+LR+ F RE
Sbjct: 492 AKLRS-YFYRE 501
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 111/195 (56%), Gaps = 25/195 (12%)
Query: 21 TNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
+NGG D TE I +D ++R LCP K+ S++G +++ L+ + +IR++
Sbjct: 323 SNGGKI----NDHTE---ILFDDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLT 375
Query: 81 ETVPGCDERIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL 138
+++ G DERI+ I +S EG + LF PAQ+AL + IV L D+
Sbjct: 376 DSLDGSDERIIII-TSREGPDHELF--------PAQEALLHLQTHIV---DLGPDKD--- 420
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+IT R+LVP+ +I C G+ G + +I+ +T A ++IL + LP CAL DEL+Q+ GE
Sbjct: 421 NIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQIVGE 479
Query: 199 PAVVRKALVQIASRL 213
R ALVQI ++L
Sbjct: 480 IRAARDALVQITAKL 494
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-----KEFF 317
S R++CP V G I ++R ++ A + + D + I T +E
Sbjct: 86 SFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYP--GDAVRVIETSDGARREAD 140
Query: 318 EDP---SPTITAALRLQPRCSEKTERESGDP---------------VITTRILVPSAQIG 359
P SP A L + R E TE + GD +TTR++VP +G
Sbjct: 141 GRPPSFSPAQEALLMVHRRILE-TEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHVG 199
Query: 360 CLIGRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
CL+G+GG II +MR+ T+ IRIL +++ P+ EE+VQ+ G + A++ ++ R
Sbjct: 200 CLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISDR 259
Query: 419 LRANTFEREGAL 430
L+ + G
Sbjct: 260 LKESLHRDRGPF 271
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 145/446 (32%), Positives = 215/446 (48%), Gaps = 74/446 (16%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
YR LCP +IG++IGKGG +++Q+R T + I++ V GC ER++++ SS E
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDE------- 85
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
G + AQ+ALF V R+ D+ +D T VRMLV Q+GCV+GKGG+VI +
Sbjct: 86 PGAELCRAQEALFAVQSRLSEADAAQED-----TCCVVRMLVEQAQVGCVLGKGGEVISD 140
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS-QHLL 224
+R T A IR+ LP CA S D L+ V GE V AL Q+++ L + R Q
Sbjct: 141 LRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQAR 200
Query: 225 LSSSSNIYQSSGVYLS----------------APLVGSYGNYSARRD------------E 256
+ NI + + AP+ + ++ D E
Sbjct: 201 APMTFNITAVATAAVQPEQAQHRRQPMREPVLAPIARPHQCHNCLPDAHAMQPRMTAVQE 260
Query: 257 ASA-REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD--SSGA--------EGD 305
ASA E LRL+ PA +IG VIG+ G +I+ IR ++GA IKV S GA +G
Sbjct: 261 ASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGV 320
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG-DPVITTRILVPSA-------- 356
D +I ++ E A+ L C SG PV RILVP+
Sbjct: 321 DRVITVAAAEAAGAAVSPTEEAVCLMALCLLGP---SGLPPVPCIRILVPTPQGGTAEAL 377
Query: 357 ---QIGCLIGRGGAIISEMRSATRASIRILTNEN-----VPK--VAYEDEEMVQITGSLD 406
Q+G ++G+GGA I+++R + A +R++ E +P+ A + ++VQI G +
Sbjct: 378 SLLQVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEGPIT 437
Query: 407 VASSALSQVTLRLRANTFEREGALAA 432
A+ V +LRA +GA A
Sbjct: 438 ATVKAVRAVCAQLRAWQARSQGAQPA 463
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTI 324
RL+CPA IG VIGKGG +I+Q+R +GA IKV+ A + +I +S+ + +P +
Sbjct: 34 RLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSD---EPGAEL 90
Query: 325 T----AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A +Q R SE + D R+LV AQ+GC++G+GG +IS++R T A+I
Sbjct: 91 CRAQEALFAVQSRLSEADAAQE-DTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANI 149
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYV 440
R+ ++P A ++ +V + G S AL Q++ LR ++ + P
Sbjct: 150 RVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRK--------PQQARA 201
Query: 441 PMSLDITDGSKYGNRDNQSRGR 462
PM+ +IT + + Q++ R
Sbjct: 202 PMTFNITAVATAAVQPEQAQHR 223
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 56/193 (29%)
Query: 40 GSEDT--VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET--VPGC---DERIVT 92
EDT V R L ++G ++GKGGE++ LR T +NIR+S+ +P C ++ +V
Sbjct: 110 AQEDTCCVVRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVA 169
Query: 93 IYSSSEGT----------------------------NLFEDSGEFVSPAQDALFR--VHD 122
+ ++ N+ + V P Q R + +
Sbjct: 170 VKGEAQAVSDALRQLSALLRTHSQRKPQQARAPMTFNITAVATAAVQPEQAQHRRQPMRE 229
Query: 123 RIVA--------EDSLAD-----------DEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
++A + L D E + + +R+LVPA IGCVIG+ G++I
Sbjct: 230 PVLAPIARPHQCHNCLPDAHAMQPRMTAVQEASAVVEVQLRLLVPATHIGCVIGRRGEMI 289
Query: 164 QNIRTETRAQIRI 176
+ IR +T A I++
Sbjct: 290 RTIRDDTGAHIKV 302
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 44/162 (27%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++ R+L PA +IG VIGKGG VIQ +R T A+I++ + VAG
Sbjct: 30 MVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPE---------------VAG-- 72
Query: 200 AVVRKALVQIASRLHENP----SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
+ L+ ++S + P R+Q L + S + ++ +A+ D
Sbjct: 73 --CSERLISLSS--SDEPGAELCRAQEALFAVQSRLSEAD---------------AAQED 113
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+R++ +G V+GKGG +I +R+ +GA+I+V
Sbjct: 114 TCCV----VRMLVEQAQVGCVLGKGGEVISDLRRRTGANIRV 151
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
+R + ++ R+L P+ +IG +IG+GG++I +MR +T A I++ P+VA E
Sbjct: 22 VKRSAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKV-----EPEVAGCSER 76
Query: 398 MVQITGS 404
++ ++ S
Sbjct: 77 LISLSSS 83
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 214/450 (47%), Gaps = 65/450 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T YR LC + G +IGK G I+K +R T + I + E V G +ERI+ I T
Sbjct: 63 TSYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEI----SDTRRR 118
Query: 104 EDSGEF--VSPAQDALFRVHDRIVAEDSLADDE-------FGELTLITVRMLVPADQIGC 154
+ G SPAQ+AL +H+R++ D +DE G ++ R++V +G
Sbjct: 119 DPDGRMPQFSPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGS 178
Query: 155 VIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++GKGG++I+ +R ET+ QIRIL +D +LP C +E++QV G+ V+ A + I+SRL
Sbjct: 179 LLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRL 238
Query: 214 HENPSRSQ-----------HLLLSSSSNIYQSSGVYLSAPLVGS---------------- 246
E+ R + H S + YL GS
Sbjct: 239 RESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDYLPHVSSGSRRPSVERSGFGSRIAT 298
Query: 247 -------YGNYSARRDEASA----------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ + S D+ +A + R++CP + ++G+ GGI++ ++
Sbjct: 299 TNSRNNNHASISYSMDQGAAPVAHDEQPFYEDLIFRILCPVDRVDRIVGESGGILELLQD 358
Query: 290 ESGASIKVDSSGAEGDDCIIFISTKEFFEDPS-PTITAALRLQPRCSEKTERESGDPVIT 348
G +++ D+ ++ I+++E D P A L +Q + + D +IT
Sbjct: 359 RVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEALLHIQTHIVDLS-----DSIIT 413
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
TR++VPS+ I CL G+ + +SE+ +T AS++IL E +P +E+VQI G ++ A
Sbjct: 414 TRLIVPSSDIECLDGKNAS-LSEIERSTGASVQILPREELPPCIANTDELVQIVGEIEAA 472
Query: 409 SSALSQVTLRLRANTFEREGALAAHPPVLP 438
+ + VT +LR+ + PP P
Sbjct: 473 RNVILDVTAKLRSYVYRDILQWDTVPPSAP 502
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 56/310 (18%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
ED ++R LCP+ ++ I+G+ G I++ L+ +++IS+ V G DE++V I +S EG N
Sbjct: 329 EDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVII-TSEEGPN 387
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ + PAQ+AL + IV L+D ++IT R++VP+ I C+ GK
Sbjct: 388 ------DTMFPAQEALLHIQTHIV---DLSD------SIITTRLIVPSSDIECLDGKNAS 432
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE------ 215
+ I T A ++IL E LP C + DEL+Q+ GE R ++ + ++L
Sbjct: 433 -LSEIERSTGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDI 491
Query: 216 ------NPSRSQHLLLSSSSNI-------------YQSSGVYLSAPLVGSYGNY-----S 251
PS + +SSSN QS V L++ G S
Sbjct: 492 LQWDTVPPSAPLPSVEASSSNSMATVAETATANQNMQSVAVALASKESGGSTEMGKQKES 551
Query: 252 ARRDEASA---REFS------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
RRD+ R S L +V P + ++ K + QI + SGA++K+
Sbjct: 552 DRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVEDRP 611
Query: 303 EGDDCIIFIS 312
+ + II IS
Sbjct: 612 DEKEKIIQIS 621
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 117/161 (72%), Gaps = 6/161 (3%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
TTR+LVP+++IGCLIG+GGAI++EMR T+A+IRIL+ EN+PKVA ED+EMVQI+G LD
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLD 65
Query: 407 VASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGN-- 464
VA AL QV RLRAN F+REGA++ PVLPY+P+S D +DG Y +RD++ GRG+
Sbjct: 66 VAKDALMQVVTRLRANLFDREGAVSTFLPVLPYLPVSADGSDGFNYESRDSKRHGRGHSY 125
Query: 465 ---SYATGNLPGRDSY-GSYGGSLSGGGNAYGAYGDHSSGR 501
+ +L DSY G + G G+AYGAYG H SGR
Sbjct: 126 SSGYGGSSDLAAADSYGSYGGSQIGGSGSAYGAYGGHPSGR 166
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
T R+LVP +IGC+IGKGG ++ +R T+A IRIL E+LP A DE++Q++G+
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLD 65
Query: 201 VVRKALVQIASRLHEN 216
V + AL+Q+ +RL N
Sbjct: 66 VAKDALMQVVTRLRAN 81
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSEGTNLFE 104
R L P +IG +IGKGG IV ++R TK+NIRI E +P +SE + +
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKV---------ASEDDEMVQ 59
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
SG+ + A+DAL +V R+ A +L D E T + V +P G
Sbjct: 60 ISGD-LDVAKDALMQVVTRLRA--NLFDREGAVSTFLPVLPYLPVSADG 105
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 212/477 (44%), Gaps = 88/477 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
DT++R LCP K+ SI+ + LR + I + E +P C+E ++ I + S
Sbjct: 67 DTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPT 119
Query: 103 FEDSG---EFV--------------------SPAQDALFRVHDRIV--AEDSLADDEF-- 135
+ G EF S AQ AL R + IV EDS + E
Sbjct: 120 HTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQK 179
Query: 136 -------------GELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
GE L+ R+L P+ Q+G V+G+GG+ ++ IR E+ A ++I +
Sbjct: 180 KNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQ 239
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP------------------------ 217
P CA DEL+Q++G + V KAL ++S L ++P
Sbjct: 240 NPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHASSMSV 299
Query: 218 ---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
S S N S Y S P + N A A + RL+C +G
Sbjct: 300 QDEEPSPRRRYGSHHNADYRSRSYSSIP---GHENAGAGPRAAMEEDVVFRLLCQPDKVG 356
Query: 275 GVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPR 333
+IGKGG +++ ++ E+GASIK+ + + D+ ++ IS +E E SP A +R R
Sbjct: 357 SLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVISARETLEQTYSPAQEAVIRAHCR 415
Query: 334 CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
+E E G V+ R+LV QIG L+GRGG II++MR T SI+I + +
Sbjct: 416 IAE-IGYEPGAAVVA-RLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGP 473
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALA---AHPPVL---PYVPMSL 444
+E+VQ+ G+L AL +T R+R F + HPP L P P L
Sbjct: 474 MSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPL 530
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 30 PGDETE---QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
PG E R ED V+R LC K+GS+IGKGG +V+ L++ET ++I+I +T P
Sbjct: 327 PGHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDL 385
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
DER+V I + E + SPAQ+A+ R H RI A+ + + R+L
Sbjct: 386 DERLVVISAR-------ETLEQTYSPAQEAVIRAHCRI------AEIGYEPGAAVVARLL 432
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
V QIG ++G+GG +I ++R T I+I + + DE++QV G V+ AL
Sbjct: 433 VHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDAL 492
Query: 207 VQIASRLHE 215
I +R+ +
Sbjct: 493 FHITNRIRD 501
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 141/477 (29%), Positives = 212/477 (44%), Gaps = 88/477 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
DT++R LCP K+ SI+ + LR + I + E +P C+E ++ I + S
Sbjct: 67 DTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSKPA 119
Query: 103 FEDSG---EFV--------------------SPAQDALFRVHDRIV--AEDSLADDEF-- 135
+ G EF S AQ AL R + IV EDS + E
Sbjct: 120 HTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQEIQK 179
Query: 136 -------------GELT-LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
GE L+ R+L P+ Q+G V+G+GG+ ++ IR E+ A ++I +
Sbjct: 180 KNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQ 239
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP------------------------ 217
P CA DEL+Q++G + V KAL ++S L ++P
Sbjct: 240 NPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHASSMSV 299
Query: 218 ---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
S S N S Y S P + N A A + RL+C +G
Sbjct: 300 QDEEPSPRRRYGSHHNADYRSRSYSSIP---GHENAGAGPRAAMEEDVVFRLLCQPDKVG 356
Query: 275 GVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPR 333
+IGKGG +++ ++ E+GASIK+ + + D+ ++ IS +E E SP A +R R
Sbjct: 357 SLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVISARETLEQTYSPAQEAVIRAHCR 415
Query: 334 CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
+E E G V+ R+LV QIG L+GRGG II++MR T SI+I + +
Sbjct: 416 IAE-IGYEPGAAVVA-RLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGP 473
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALA---AHPPVL---PYVPMSL 444
+E+VQ+ G+L AL +T R+R F + HPP L P P L
Sbjct: 474 MSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPL 530
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 101/189 (53%), Gaps = 17/189 (8%)
Query: 30 PGDETE---QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
PG E R ED V+R LC K+GS+IGKGG +V+ L++ET ++I+I +T P
Sbjct: 327 PGHENAGAGPRAAMEEDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDL 385
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
DER+V I + E + SPAQ+A+ R H RI A+ + + R+L
Sbjct: 386 DERLVVISAR-------ETLEQTYSPAQEAVIRAHCRI------AEIGYEPGAAVVARLL 432
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
V QIG ++G+GG +I ++R T I+I + + DE++QV G V+ AL
Sbjct: 433 VHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDAL 492
Query: 207 VQIASRLHE 215
I +R+ +
Sbjct: 493 FHITNRIRD 501
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 212/454 (46%), Gaps = 58/454 (12%)
Query: 109 FVSPAQDALFRVHDRIVAED--SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+SP +A+ V DRI + + + D GE T ++ R+LV Q+G ++G G VI+ +
Sbjct: 199 LLSP-MNAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQM 257
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
++ +IR+ K E LPLCAL DEL Q+ GE VRK L +A L +P R +L S
Sbjct: 258 SADSGCEIRVSK-EKLPLCALLKDELCQITGELDSVRKGLNAVAQVLLTHPPRESDVLPS 316
Query: 227 S-SSNIYQSSGVY-------LSAPLVGS------------------YGNYSARRDE---- 256
SS+ + S S P G + + +R
Sbjct: 317 GLSSHAFNRSDALPPGMQPNFSLPFQGPSHARGPFDSIDPRPNIPPFPTFPDQRSNIPPF 376
Query: 257 -------------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
+ RL+C + +G +IGKGG IK I++++G IK+ + +
Sbjct: 377 PAFPDALMHSHASVPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPK 436
Query: 304 GDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+D +I IS D SP A L +Q R + T I+ R++V Q+GCL+
Sbjct: 437 SEDRVIVISGPAHPGDGISPAQNAILHVQRRITPPTANNKEGAAIS-RLIVSPNQVGCLL 495
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
G+GG+II+EMR ++A I +L+ + +PK E +E+VQITG + AL Q+T RLR +
Sbjct: 496 GKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRNH 555
Query: 423 TFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGG 482
F R+ A P + P SLD G+ G+ ++ S Y + +D G
Sbjct: 556 LF-RDRMAAMGPNMQPPF-GSLDPQFGAFAGSHESTS---PRIYPNASQFHKDFMGRPLD 610
Query: 483 SLSGGGNAYGA--YGDHSSGRGLSG--HRKNHGY 512
+ NA G GD S G+ G HR G+
Sbjct: 611 EMPAPWNAKGMRDVGDPMSISGMPGMPHRGIGGF 644
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 143/328 (43%), Gaps = 66/328 (20%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+ E +R LC K+GSIIGKGG +K ++ +T I+I ETVP ++R++ I +
Sbjct: 390 VPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAH 449
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
G+ +SPAQ+A+ V RI A+++ G R++V +Q+GC++GK
Sbjct: 450 -------PGDGISPAQNAILHVQRRITP--PTANNKEGAAI---SRLIVSPNQVGCLLGK 497
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG +I +R ++A I +L + +P DE++Q+ G+ +++AL+QI +RL +
Sbjct: 498 GGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRNHLF 557
Query: 219 RSQHLLL-----------------------SSSSNIY----QSSGVYLSAPLVGSYGNYS 251
R + + S+S IY Q ++ PL ++
Sbjct: 558 RDRMAAMGPNMQPPFGSLDPQFGAFAGSHESTSPRIYPNASQFHKDFMGRPLDEMPAPWN 617
Query: 252 AR--RDEASAREFSLRLVCPAGNIGGVIGKG-------------------------GGII 284
A+ RD S P IGG G G GG +
Sbjct: 618 AKGMRDVGDPMSISGMPGMPHRGIGGFSGAGHSSMPNITRDIMVPRFVIPALCGHDGGCL 677
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFIS 312
IR+ SGA I A+ D IS
Sbjct: 678 NMIREFSGAMITFTEPIADAADTPFMIS 705
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 5 SNINYGKRTHFQSDAATNGGSKRRNPGDETEQRG---IGSEDTVYRYLCPLRKIGSIIGK 61
SN+N KR ++ + NG K + + Q+ I + R LCP K G++IGK
Sbjct: 3 SNVNPSKRPFQKNSSEHNGRGKWQKTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVIGK 62
Query: 62 GGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GG I+ ++R E IR+ E VPGCDER++ I
Sbjct: 63 GGVIIAKIRQENGVKIRVDEAVPGCDERVIVI 94
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
+R++CP G VIGKGG II +IRQE+G I+VD + D+ +I I+ E
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
+R+L P ++ G VIGKGG +I IR E +IR+ DE +P C
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRV--DEAVPGC 87
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 200/433 (46%), Gaps = 65/433 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY-SSSEGTNLF- 103
+R +C IG +IG+ G + Q+R +T + E V G D R++TI +S G +
Sbjct: 27 FRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASPGKRITL 86
Query: 104 ------------EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE--------LTLITV 143
E+ E VS AQ+A+ RV +R+ D + G L
Sbjct: 87 NSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNNSGLGEGYC 146
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+L QIG V+GKGG+ + +R E+ A IR L H CA D+L+Q+ G V+
Sbjct: 147 GLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPPPH---CASKDDQLIQITGSILAVK 203
Query: 204 KALVQIASRLHENP-------------SRSQHLLLSSSSNIYQSSGVYLSA--------- 241
KALV + LH+ P R+ HL +SS+ + +LS+
Sbjct: 204 KALVAVTDCLHDCPPYEKDPTLLMRPLERASHL---ASSDPHAEFFPHLSSLLPPLSGNS 260
Query: 242 ----PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
PL G + EA E S RL+C G G +IGK G I++ ++ E+GASI
Sbjct: 261 GTSHPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGAAGSIIGKKGTIVRTLQNETGASIMF 320
Query: 298 DSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP-------VITT 349
+ + + ++ IS E E SP AA+ + R E + E G P +T
Sbjct: 321 AAPMSMSGERVVTISALENLESWHSPAQNAAILVFARSVEH-DIEKGHPSGLIEGATVTA 379
Query: 350 RILVPSAQIGCLIGRGGA--IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
R+LV S + CLI +GG I SEM + A IRIL E + A ED+ +++ITG
Sbjct: 380 RLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRILDGEQIMACASEDDVVIEITGEYKN 439
Query: 408 ASSALSQVTLRLR 420
+AL VT +LR
Sbjct: 440 VQNALFMVTGKLR 452
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 211/432 (48%), Gaps = 64/432 (14%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+ T +R LCP K G + + ++ + I I PG R++ +++GT
Sbjct: 107 QTTSFRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVI---ETADGT- 159
Query: 102 LFEDSGE--FVSPAQDALFRVHDRIV---AEDSLADDEFG-------ELTLITVRMLVPA 149
L E G SPAQ+AL VH RI+ +D D E+G + +T R++VP
Sbjct: 160 LREADGRPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPR 219
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
+GC++GKGG++I+ +R+ET+ IRIL +++++P C ++++QV GE V+KA+
Sbjct: 220 QHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAI 279
Query: 209 IASRLHENPSRSQHLLLS---------SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
I+ RL E+ R + L S ++ Y G + A Y + R+ S
Sbjct: 280 ISDRLKESLHRDRGPFLRGRNSPEHRISQADEYLGGGQQMPA-FEEPYPRFDQIRNNGSM 338
Query: 260 R----------------------EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
E R++CP ++G GII ++ E G +++
Sbjct: 339 EPPGYEFDSNGSKFNEHPEIPYDEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRL 398
Query: 298 DSSGAEGDDCIIFISTK-----EFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRIL 352
A D+ + I+++ E F P A L +Q + + D +ITTR+L
Sbjct: 399 TDLIAGSDERTLIITSREGPDHELF----PAQEALLHIQTFIVDLGPDK--DNIITTRLL 452
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
VPS++I C GR G+ +S+++ T A+++IL E +P A E +E++QI G + A +AL
Sbjct: 453 VPSSEIACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNAL 511
Query: 413 SQVTLRLRANTF 424
QVT +LR+ +
Sbjct: 512 MQVTTKLRSYIY 523
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 101/181 (55%), Gaps = 18/181 (9%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
E I ++ ++R LCP K S++G I+ L++E ++R+++ + G DER + I
Sbjct: 354 EHPEIPYDEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLII- 412
Query: 95 SSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQI 152
+S EG + LF PAQ+AL + IV D+ +IT R+LVP+ +I
Sbjct: 413 TSREGPDHELF--------PAQEALLHIQTFIVDLGPDKDN------IITTRLLVPSSEI 458
Query: 153 GCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
C G+ G + +I+ +T A ++IL E LP CAL DEL+Q+ GE R AL+Q+ ++
Sbjct: 459 ACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTK 517
Query: 213 L 213
L
Sbjct: 518 L 518
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE-NVPKVAYEDEEMVQITGSL 405
+TTR++VP +GCL+G+GG II +MRS T+ IRIL E N+P+ E++VQ+ G
Sbjct: 211 VTTRLIVPRQHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEG 270
Query: 406 DVASSALSQVTLRLRANTFEREGAL 430
+ A++ ++ RL+ + G
Sbjct: 271 NNVKKAVAIISDRLKESLHRDRGPF 295
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 133/427 (31%), Positives = 204/427 (47%), Gaps = 46/427 (10%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN--LF 103
+R +C +G +IG G IV QLR ET I +++ ++R++ + S L
Sbjct: 43 FRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLL 102
Query: 104 EDSGEF-VSPAQDALFRVHDRIV---AEDSLADDEF--GELTLITVRMLVPADQIGCVIG 157
D GE VS AQ+A+ RV +R+ AE + + GE + ++L QIG V+G
Sbjct: 103 GDGGEVEVSSAQEAVVRVFERVWDLEAEKGVNSNRAVNGE---VFSKLLAHTSQIGAVVG 159
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
KGG+ I IR T A+IR+ P CA +EL+Q+ G V+KAL+ ++ L + P
Sbjct: 160 KGGKNITAIRNNTGAKIRVFPP---PQCATKDEELVQITGGILAVKKALISVSHCLQDCP 216
Query: 218 SRSQHLL------------LSSSSNIYQSSGVYLSAPLVGSYG----------NYSARRD 255
+ + LSS N +L++ L G N ++ RD
Sbjct: 217 PLCKVPVTSSTPTVSSSDRLSSDPNAELFP--HLNSLLTSMEGLSIYERTTNSNETSNRD 274
Query: 256 EASA-REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK 314
A E RL+C G VIGK G I++ + ++GASI + +E + I+ IS
Sbjct: 275 SKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAV 334
Query: 315 EFFED-PSPTITAALRLQPRCSEK------TERESGDPVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + S + +T R+LV ++ + C G G
Sbjct: 335 ESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQ 394
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+ISE+R T A I+IL E+VP A +++ +VQITG +AL ++T R+R N E
Sbjct: 395 VISELREVTGADIQILHGESVPNGASDEDVVVQITGEYRCVQNALYKITSRIRDNLSPNE 454
Query: 428 GALAAHP 434
A P
Sbjct: 455 VVAEARP 461
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 17/200 (8%)
Query: 26 KRRNPGDETEQR-GIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV 83
+R +ET R G+E + V+R LC GS+IGK G IV+ L S+T ++I + +
Sbjct: 262 ERTTNSNETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPL 321
Query: 84 PGCDERIVTIYS--SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL- 140
ERIVTI + S E N SPAQDA+ V RI+ ED + ++
Sbjct: 322 SEHAERIVTISAVESLESCN---------SPAQDAVILVFARII-EDHIGKGFLQVSSME 371
Query: 141 --ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+T R+LV + C G GQVI +R T A I+IL E +P A D ++Q+ GE
Sbjct: 372 SPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDEDVVVQITGE 431
Query: 199 PAVVRKALVQIASRLHENPS 218
V+ AL +I SR+ +N S
Sbjct: 432 YRCVQNALYKITSRIRDNLS 451
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 22/174 (12%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----STKEF 316
+ + RLVC A +GG+IG G I+ Q+R+E+G I + S + +D +I + S ++
Sbjct: 40 QIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSPRKG 99
Query: 317 F-------EDPSPTITAALRLQPRCSEKTERESG-------DPVITTRILVPSAQIGCLI 362
+ S A +R+ R + E E G + + +++L ++QIG ++
Sbjct: 100 LLLGDGGEVEVSSAQEAVVRVFERVWD-LEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVV 158
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
G+GG I+ +R+ T A IR+ P+ A +DEE+VQITG + AL V+
Sbjct: 159 GKGGKNITAIRNNTGAKIRVFPP---PQCATKDEELVQITGGILAVKKALISVS 209
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 177/369 (47%), Gaps = 70/369 (18%)
Query: 7 INYGKRTHFQSDAATNGGSKRRNPGDE-TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEI 65
+ GKR+ Q D + +++R+ D+ T G+ VYR LCP IGS+IGK G++
Sbjct: 2 VESGKRSRPQRDYDGDTNNQKRHKDDKGTNNDGL----IVYRILCPDGVIGSVIGKSGKV 57
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF-----VSPAQDALFRV 120
+ +R E+++ +++ + PG +RI+TIY + + +F + AQDAL +V
Sbjct: 58 INSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKV 117
Query: 121 HDRIV-AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
H I A SL D + ++LVPA Q +IGK G I+ +R++TR I+I+ K
Sbjct: 118 HAAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAK 177
Query: 179 DEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHE-NPSRSQHLLLSSSSN----- 230
D P CA+ FD L + GE V+KAL +++ +++ NP L +
Sbjct: 178 DSTDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSII 237
Query: 231 ------IYQSSGVYLSA--------------------------------------PLVGS 246
IYQ G Y +A P+V S
Sbjct: 238 IPSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLPVVPS 297
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+GN S E +R++CP IG VIGKGG IK IRQ SGA I+VD + A+ D+
Sbjct: 298 FGNVS------RYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDE 351
Query: 307 CIIFISTKE 315
CII ++ E
Sbjct: 352 CIITVTATE 360
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------STK 314
R++CP G IG VIGK G +I IR ES A +KV D II I
Sbjct: 39 RILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVD 98
Query: 315 EFFEDPSPTITAA---LRLQPRCS---------EKTERESGDPVITTRILVPSAQIGCLI 362
+ F +P A L++ S +K R+ + +ILVP++Q +I
Sbjct: 99 DDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEE----CQILVPASQSANII 154
Query: 363 GRGGAIISEMRSATRASIRILTNENVP---KVAYEDEEMVQITGSLDVASSALSQVT 416
G+ GA I +RS TR SI+I+ ++ A + + + ITG + AL V+
Sbjct: 155 GKAGATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVS 211
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 197/392 (50%), Gaps = 47/392 (11%)
Query: 104 EDSGEFVSP-AQDALFRVHDRIVA--EDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E V P A A+ V DRI A +++ + T +++R+LV Q G ++GKGG
Sbjct: 204 ESEPERVIPSALKAISLVFDRIFAAGDNNETGNASAASTPVSLRLLVLYSQAGWLLGKGG 263
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR- 219
VI+ + + +IR+L+D +LP CAL D+L Q+ GE VRK L ++ L +P +
Sbjct: 264 SVIKQMSADNGCEIRVLRD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSELLLAHPPKE 322
Query: 220 --------------------SQHLLLSSSSNIY-------QSSGVY----LSAPLVGSYG 248
S L SN + Q++G + L P+ +G
Sbjct: 323 TDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQGPSQANGPFDIIDLQPPI---HG 379
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+ S S R++CP +G +IGKGG I+K I++++G IKV + + +D I
Sbjct: 380 HASV-----PIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRI 434
Query: 309 IFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGA 367
I IS D SP A L +Q + T + P I R++V + Q+GC++G+GG+
Sbjct: 435 ISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPAIC-RLIVSANQVGCVLGKGGS 493
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
II+EMR + A I +L+ + +P+ E +E+VQI+GS + AL Q+T RLR + F +
Sbjct: 494 IIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVD 553
Query: 428 GALAAHPPVLPYVPMSLDITDGSKYGNRDNQS 459
A P + P + LD G GN ++ S
Sbjct: 554 RMPAMGPNMRPPFGL-LDSQFGPFAGNHESPS 584
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 103/172 (59%), Gaps = 12/172 (6%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
E +R LCP K+GSIIGKGG IVK ++ +T I++ +TVP ++RI++I + ++
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+SPAQ+A+ V +I+ S D + G R++V A+Q+GCV+GKGG
Sbjct: 446 -------GISPAQNAILHVQRKIMLPTS--DKKEGP---AICRLIVSANQVGCVLGKGGS 493
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I +R + A I +L + +P DE++Q++G +++AL+QI +RL
Sbjct: 494 IIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARL 545
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R LCP K G++IGKGG I+ ++R ET+ IR+ PGCDER++ I +
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITA 96
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
R++CPA G VIGKGG II +IR+E+ I+VD + D+ +IFI+ + E+ S
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEAS 104
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
R+L PA + G VIGKGG +I IR ETR +IR+ D P C
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIREETRMRIRV--DRAAPGC 87
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGD 344
QIRQE+GA+IKV + D+ +I +S+KEF +D SPT+ A L LQ + SEK+ E +
Sbjct: 21 QIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGKE 80
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
VITTR LVPS IGCL+G+GG+IISEMR TRA+IRI++ +N+PK A E+EE+VQ+ G
Sbjct: 81 GVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIGE 140
Query: 405 LDVASSALSQVTLRLRANTF-EREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQ-SRGR 462
+DVA AL Q+ RLR+N F +++G A V P + + S +G D S GR
Sbjct: 141 VDVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLSLYGRGVPDSGFGRGDELGSTGR 200
Query: 463 GNSYATGNLPG-------RDSYGSYGGSLSGGGNAYGAYGDHSSGRGLSG 505
S + L G SYGS GG +GG YG++ S+ R +G
Sbjct: 201 MYSLPSLGLEGTASGRYSSASYGSLGGVQNGGAGGYGSFSSFSTSRAPAG 250
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 146/302 (48%), Gaps = 68/302 (22%)
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
Q+R ET +NI++ + VP CDER++ + S F D + +SP +A+ + + +E
Sbjct: 21 QIRQETGANIKVIDQVPDCDERVIVVSSKE-----FVD--DRISPTLEAVLHLQFK-TSE 72
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
S+ E G+ +IT R LVP++ IGC++GKGG +I +R TRA IRI+ +++P CA
Sbjct: 73 KSI---EEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAG 129
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH------LLLSSSSNIY--------- 232
+EL+QV GE V R+AL+QIA+RL N + Q ++ S ++Y
Sbjct: 130 ENEELVQVIGEVDVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLSLYGRGVPDSGF 189
Query: 233 ------QSSGVYLSAPLVGSYGNYSARRDEASAREF------------------------ 262
S+G S P +G G S R AS
Sbjct: 190 GRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGSLGGVQNGGAGGYGSFSSFSTSRAPA 249
Query: 263 ------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
++ + P ++G ++G+GG I QIR+ SGA +K+ S G D ++
Sbjct: 250 GGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVE 309
Query: 311 IS 312
IS
Sbjct: 310 IS 311
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSEGTNLFE 104
R+L P IG ++GKGG I+ ++R T++NIRI + +P C + E L +
Sbjct: 86 RFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKC---------AGENEELVQ 136
Query: 105 DSGEFVSPAQDALFRVHDRI 124
GE V A++AL ++ R+
Sbjct: 137 VIGE-VDVAREALIQIATRL 155
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 9 YGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
YG + F + A GG G+ + P + +GSI+G+GG + Q
Sbjct: 236 YGSFSSFSTSRAPAGGLPA----------GVAKSGSTVEVTIPNKSVGSILGRGGSNISQ 285
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+R + + +++ E+ PG +R+V I + E T+
Sbjct: 286 IREISGAKVKLHESKPGGTDRVVEISGTPEQTH 318
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 137/493 (27%), Positives = 230/493 (46%), Gaps = 63/493 (12%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T +R LCP K G + + + ++ + I I G R++ + ++G
Sbjct: 93 TSFRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEM---ADGVPRD 146
Query: 104 ED-SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----------LITVRMLVPADQI 152
D SPAQ+AL VH RI+ + DE GE +T R++VP +
Sbjct: 147 VDGRPPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHV 206
Query: 153 GCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
GC++GKGG++I+ +R+ET+ IRIL +D++ P C +E++Q+ GE V+KA+ I+
Sbjct: 207 GCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISD 266
Query: 212 RLHENPSRS----------QHLLLSSSSNIYQSSGVY---------------LSAP--LV 244
RL E+ R +H + S ++ YQ Y + P
Sbjct: 267 RLKESLHRDRGPFRGRNSPEHRI--SQADEYQQMPAYEEPFARFDQIRNNGSMEPPGYEF 324
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S G+ E E R++CP ++G GI++ ++ E G +++
Sbjct: 325 DSNGSKFNEHPEFPYDEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGS 384
Query: 305 DDCIIFISTKE-----FFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIG 359
D+ + I+++E F P A L +Q + D +ITTR+LVPS+++
Sbjct: 385 DERTVIITSREGPDHELF----PAQEALLHIQTHIVDLGP--DNDNIITTRLLVPSSEVA 438
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
C GR G++ S+++ T A+++IL E +P A E +E++QI G + A SAL QVT ++
Sbjct: 439 CFEGRDGSL-SDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKI 497
Query: 420 RANTFEREGALA---AHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDS 476
R+ + RE ++ A V +P + G GN + + + T + +DS
Sbjct: 498 RSYIY-REMSVPNQIASINVHGSIPPANGSPRGIYPGNDLPMAIYQQSQQMTTSWHSKDS 556
Query: 477 YGSYGGSLSGGGN 489
GS GS G N
Sbjct: 557 GGSASGSFEQGSN 569
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 100/174 (57%), Gaps = 18/174 (10%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ ++R LCP K +++G I++ L+ E ++R+++ V G DER V I +S EG +
Sbjct: 340 DEIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVII-TSREGPD 398
Query: 102 --LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
LF PAQ+AL + IV D D++ +IT R+LVP+ ++ C G+
Sbjct: 399 HELF--------PAQEALLHIQTHIV--DLGPDND----NIITTRLLVPSSEVACFEGRD 444
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G + +I+ +T A ++IL E LP CAL DEL+Q+ G R AL+Q+ +++
Sbjct: 445 GS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKI 497
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 187/377 (49%), Gaps = 36/377 (9%)
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRT 168
A A+ V DRI A + ++E G + +++RMLV Q G ++GKGG V++ +
Sbjct: 203 ALKAVSLVFDRIFATE--GNNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVKQMAA 260
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS-- 226
+ +IR+LKD +LP CAL D+L Q+ GE VRK L ++ L +P + +
Sbjct: 261 DNGCEIRVLKD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKETDAVADVH 319
Query: 227 -----SSSNIYQSSGV------YLSAPLVGSYGNYSARRD------------EASAREFS 263
S S Q G+ PL G + D + S
Sbjct: 320 SSGSSSRSLFSQPDGLPSGMQSNFHIPLQGPPSQANGPFDIVDLQPPIHGHASVAIESLS 379
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++CP +G +IGKGG I+K I+ ++G IKV + + DD II IS D SP
Sbjct: 380 FRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDGISP 439
Query: 323 TITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A L +Q + + + P T R++V Q+GC++G+GG+II+EMR + A I +
Sbjct: 440 AQNAILHVQRKIMLPSSDKKEGPA-TCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFIVV 498
Query: 383 LTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPM 442
L+ + +P+ E +E++QI GS + AL QVT RLR + F R+ A P + P +
Sbjct: 499 LSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLF-RDRMPAVGPNMRPPFGL 557
Query: 443 SLDITDGSKYGNRDNQS 459
LD G GN ++ S
Sbjct: 558 -LDPQFGPFSGNHESSS 573
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 26 KRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG 85
K ++P Q I ++R LCP K G++IGKGG I+ ++R ET+ IR+ PG
Sbjct: 27 KTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPG 86
Query: 86 CDERIVTIYSSSE 98
CDER++ I ++++
Sbjct: 87 CDERVIFITAANK 99
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
R++CPA G VIGKGG II +IRQE+ I+VD + D+ +IFI+
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITA 96
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
R+L PA + G VIGKGG +I IR ETR +IR+ D P C
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIRQETRMRIRV--DRAAPGC 87
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
E G P+ RIL P+++ G +IG+GGAII+++R TR IR+
Sbjct: 41 EPGVPIF--RILCPASKSGNVIGKGGAIIAKIRQETRMRIRV 80
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 189/355 (53%), Gaps = 25/355 (7%)
Query: 113 AQDALFRVHDRIVAED--SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
A A+ V DRI + + D GE +++R+LV Q+G ++GK G VI+ + T++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDS 304
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
+IR+ KD+ LPLCAL DEL Q+ GE VRK L +A L +P + +L
Sbjct: 305 CCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVL------ 357
Query: 231 IYQSSGVYLSAPLVGSYGNYSAR----RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
G + S P V N+ + RL+C + +GG+IGKGG IK
Sbjct: 358 -----GAHNSGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKS 412
Query: 287 IRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDP 345
I+ ++G IKV + + +D I+FIS D SP A L +Q + + + G P
Sbjct: 413 IQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEG-P 471
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
I R++V Q+GCL+G+GG+II+EMR + A I +L+ + +PK E++E+VQI+G+
Sbjct: 472 AIC-RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGAS 530
Query: 406 DVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL-DITDGSKYGNRDNQS 459
+ AL Q+T RLR + F R+ + P V P P L D GS GN D+ S
Sbjct: 531 EAIQEALMQITARLRNHLF-RDRMASTVPNVQP--PFGLVDPQFGSYAGNHDSIS 582
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 121/233 (51%), Gaps = 23/233 (9%)
Query: 33 ETEQRGIGS---EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
E G GS E +R LC K+G IIGKGG +K ++++T I++ +TVP ++R
Sbjct: 374 EALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDR 433
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPA 149
IV I + G+ +SPAQ+A+ V +IV + + R++V
Sbjct: 434 IVFISGPAH-------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSP 480
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
+Q+GC++GKGG +I +R + A I +L + +P DE++Q++G +++AL+QI
Sbjct: 481 NQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQI 540
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+RL + R + + S+ N+ G+ + +G+Y+ D S R F
Sbjct: 541 TARLRNHLFRDR--MASTVPNVQPPFGL-----VDPQFGSYAGNHDSISPRIF 586
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
++R LCP K G++IGKGG I+ ++R ET IR+ E VPGCDER++ I +
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
R++CP G VIGKGGGII +IRQE+G I+VD D+ +I I+
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVIT 138
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
R+L P + G VIGKGG +I IR ET +IR+ DE +P C
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGC 130
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 194/370 (52%), Gaps = 29/370 (7%)
Query: 113 AQDALFRVHDRIVAED--SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
A A+ V DRI + + D GE +++R+LV Q+G ++GK G VI+ + T++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQMSTDS 304
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS---- 226
+IR+ KD+ LPLCAL DEL Q+ GE VRK L +A L +P + +L +
Sbjct: 305 CCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGAHNSG 363
Query: 227 SSSNIYQSSGVY-------LSAPLVGSYGNYSARRDEA--------SAREFSLRLVCPAG 271
SS + + V L P G + EA + RL+C +
Sbjct: 364 SSRSFFNQPDVLPPGMQPNLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRLLCSSD 423
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRL 330
+GG+IGKGG IK I+ ++G IKV + + +D I+FIS D SP A L +
Sbjct: 424 KVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHV 483
Query: 331 QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
Q + + + G P I R++V Q+GCL+G+GG+II+EMR + A I +L+ + +PK
Sbjct: 484 QRKIVPTSNTKEG-PAIC-RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPK 541
Query: 391 VAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL-DITDG 449
E++E+VQI+G+ + AL Q+T RLR + F R+ + P V P P L D G
Sbjct: 542 GVPENDEVVQISGASEAIQEALMQITARLRNHLF-RDRMASTVPNVQP--PFGLVDPQFG 598
Query: 450 SKYGNRDNQS 459
S GN D+ S
Sbjct: 599 SYAGNHDSIS 608
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 121/233 (51%), Gaps = 23/233 (9%)
Query: 33 ETEQRGIGS---EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
E G GS E +R LC K+G IIGKGG +K ++++T I++ +TVP ++R
Sbjct: 400 EALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDR 459
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPA 149
IV I + G+ +SPAQ+A+ V +IV + + R++V
Sbjct: 460 IVFISGPAH-------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSP 506
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
+Q+GC++GKGG +I +R + A I +L + +P DE++Q++G +++AL+QI
Sbjct: 507 NQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQI 566
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+RL + R + + S+ N+ G+ + +G+Y+ D S R F
Sbjct: 567 TARLRNHLFRDR--MASTVPNVQPPFGL-----VDPQFGSYAGNHDSISPRIF 612
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
++R LCP K G++IGKGG I+ ++R ET IR+ E VPGCDER++ I +
Sbjct: 89 IFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
R++CP G VIGKGGGII +IRQE+G I+VD D+ +I I+
Sbjct: 90 FRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVIT 138
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
R+L P + G VIGKGG +I IR ET +IR+ DE +P C
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGC 130
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 230/463 (49%), Gaps = 67/463 (14%)
Query: 20 ATNGGS--KRRNPGDETE--QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
+TNG S KR P T + S ++R LC +IG IIGKGG I+K L+ +T +
Sbjct: 30 STNGYSANKRSKPHPSTSAAPSPVPSGHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGA 89
Query: 76 NIRISETVPGCDERIVTIYSS-SEGTNLFEDSGEF--VSPAQDALFRVHDRIVAEDSLAD 132
IRI + +R++TI S ++ + +F G VS Q+AL RV +RI+ + +D
Sbjct: 90 KIRIEDAPLESPDRVITIVGSVTQSSVVFSGIGSAIEVSKGQEALVRVFERILEVAAESD 149
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
G L++ R+L +G VIGKGG+ ++ IR + ++++L D+ LP CA S +E+
Sbjct: 150 SVAG--GLVSCRLLAEISSVGAVIGKGGKTVEKIRKDCGCKVKVLIDK-LPACASSNEEM 206
Query: 193 LQVAGEPAVVRKALVQIASRLHE------------------------------------- 215
+++ G+ + V+K LV ++ RL +
Sbjct: 207 IEIEGDVSAVKKGLVAVSHRLQDCQPVDKTRVISSKPVEAVSRVSFPEVGVEILPQHSAV 266
Query: 216 NPSRSQHLLLS---SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGN 272
P+ +QH + ++S+I +SG +L S ++ R++C
Sbjct: 267 RPTIAQHSVAPPTVTNSSIDYASGTHL---FSLESERVSTLDTSTPQQQVVFRILCNNDR 323
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALR--- 329
+GGVIGKGG I+ ++ E+GA+I + A D+ +I ++ E+P +AA +
Sbjct: 324 VGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITVTAS---ENPESRYSAAQKTVV 380
Query: 330 -LQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ R E + DP ++ R++V Q+GCL+G+GG IISEMR AT SIRI
Sbjct: 381 LVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRI 440
Query: 383 L-TNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
+ ++ PK E++ +V+I G ++ +T RLR N F
Sbjct: 441 IGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDNLF 483
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 21/216 (9%)
Query: 5 SNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGE 64
S+I+Y TH S S+R + D + + + V+R LC ++G +IGKGG
Sbjct: 283 SSIDYASGTHLFSLE-----SERVSTLDTSTPQ----QQVVFRILCNNDRVGGVIGKGGN 333
Query: 65 IVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI 124
IV L++ET + I I V GCDER++T+ +S E+ S AQ + V R+
Sbjct: 334 IVTALQNETGATISIGPKVAGCDERLITVTAS-------ENPESRYSAAQKTVVLVFSRV 386
Query: 125 VA---EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDE 180
V E L D E + ++VR++V +Q+GC++GKGG +I +R T IRI+ +D+
Sbjct: 387 VESVIEKGL-DPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQ 445
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
P C D ++++ G+ V+ ++ I RL +N
Sbjct: 446 GNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDN 481
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 226/492 (45%), Gaps = 61/492 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LCP K G V ++R ++ + + + G V + + +G D
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAG---DYVRVIETVDGARREAD 144
Query: 106 S-GEFVSPAQDALFRVHDRIV---AEDSLADDEFG-------ELTLITVRMLVPADQIGC 154
SPAQ+AL VH RI+ A+D D E+G + T R++VP +GC
Sbjct: 145 GRPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGC 204
Query: 155 VIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++GKGG++I+ +R ET+ IRIL +D+H P C +E++QV G+ V+KA+ I RL
Sbjct: 205 LLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRL 264
Query: 214 HENPSRSQHLL---LSSSSNIYQSSGVYLSAPLVGSYGNYSARRD--------EASAREF 262
E+ R + ++S YL + +Y R D E EF
Sbjct: 265 KESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYEF 324
Query: 263 S------------------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
R++CP + ++ GI++ ++ + G +++ A
Sbjct: 325 DSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGS 384
Query: 305 DDCIIFISTKEFFE-DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
D+ ++ I+++E + + P A L +Q + + D +ITTR+LVPS++I C G
Sbjct: 385 DERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDK--DNIITTRLLVPSSEIACFDG 442
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G++ S+++ T A+++IL E++P A E +E++QI G + A +AL QVT +LR+
Sbjct: 443 REGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFL 501
Query: 424 FE------REGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSY 477
+ + G + H + P G GN S S + +DS
Sbjct: 502 YREMSGPIQVGNINVHGAISPVA----GSPGGPNLGNDMPMSAYHQASQLATSWHSKDSG 557
Query: 478 GSYGGSLSGGGN 489
GS GS G N
Sbjct: 558 GSASGSFDQGSN 569
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 137/273 (50%), Gaps = 35/273 (12%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
N G E I +D ++R LCP K+ +++ I++ L+++ ++R+S+ + G DE
Sbjct: 327 NDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDE 386
Query: 89 RIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
R+V I +S EG + LF PAQ+A+ + IV L D+ +IT R+L
Sbjct: 387 RVVII-TSREGPDHELF--------PAQEAVLHIQTHIV---DLGPDKD---NIITTRLL 431
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
VP+ +I C G+ G + +I+ +T A ++IL E LPLCAL DEL+Q+ GE + R AL
Sbjct: 432 VPSSEIACFDGREGS-LSDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNAL 490
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS---APLVGSYGNYSARRD-------E 256
+Q+ ++L + L S Q + + +P+ GS G + D +
Sbjct: 491 IQVTTKL-------RSFLYREMSGPIQVGNINVHGAISPVAGSPGGPNLGNDMPMSAYHQ 543
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
AS S G+ G +G II +IRQ
Sbjct: 544 ASQLATSWHSKDSGGSASGSFDQGSNIIDEIRQ 576
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 227/492 (46%), Gaps = 61/492 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LCP K G V ++R ++ + + + G R++ + +G D
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVI---ETVDGARREAD 144
Query: 106 S-GEFVSPAQDALFRVHDRIV---AEDSLADDEFG-------ELTLITVRMLVPADQIGC 154
SPAQ+AL VH RI+ A+D D E+G + T R++VP +GC
Sbjct: 145 GRPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKTTTRLIVPKMHVGC 204
Query: 155 VIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++GKGG++I+ +R ET+ IRIL +D+H P C +E++QV G+ V+KA+ I RL
Sbjct: 205 LLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDRL 264
Query: 214 HENPSRSQHLL---LSSSSNIYQSSGVYLSAPLVGSYGNYSARRD--------EASAREF 262
E+ R + ++S YL + +Y R D E EF
Sbjct: 265 KESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYEF 324
Query: 263 S------------------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
R++CP + ++ GI++ ++ + G +++ A
Sbjct: 325 DSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGS 384
Query: 305 DDCIIFISTKEFFE-DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
D+ ++ I+++E + + P A L +Q + + D +ITTR+LVPS++I C G
Sbjct: 385 DERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDK--DNIITTRLLVPSSEIACFDG 442
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G++ S+++ T A+++IL E++P A E +E++QI G + A +AL QVT +LR+
Sbjct: 443 REGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSFL 501
Query: 424 FE------REGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSY 477
+ + G + H + P G GN S S + +DS
Sbjct: 502 YREMSGPIQVGNINVHGAISPVA----GSPGGPNLGNDMPMSAYHQASQLATSWHSKDSG 557
Query: 478 GSYGGSLSGGGN 489
GS GS G N
Sbjct: 558 GSASGSFDQGSN 569
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 183/395 (46%), Gaps = 84/395 (21%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
N G E I +D ++R LCP K+ +++ I++ L+++ ++R+S+ + G DE
Sbjct: 327 NDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDE 386
Query: 89 RIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
R+V I +S EG + LF PAQ+A+ + IV D+ +IT R+L
Sbjct: 387 RVVII-TSREGPDHELF--------PAQEAVLHIQTHIVDLGPDKDN------IITTRLL 431
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
VP+ +I C G+ G + +I+ +T A ++IL E LPLCAL DEL+Q+ GE + R AL
Sbjct: 432 VPSSEIACFDGREGS-LSDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNAL 490
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS---APLVGSYGNYSARRD-------E 256
+Q+ ++L + L S Q + + +P+ GS G + D +
Sbjct: 491 IQVTTKL-------RSFLYREMSGPIQVGNINVHGAISPVAGSPGGPNLGNDMPMSAYHQ 543
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
AS S G+ G +G II +IRQ GA TK F
Sbjct: 544 ASQLATSWHSKDSGGSASGSFDQGSNIIDEIRQ--GA-------------------TKRF 582
Query: 317 FEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
P +T + T +++P++ + L R G+ ++++ +
Sbjct: 583 A---VPLVTRS--------------------TLEVVIPNSAVASLTMRAGSKLAQISEIS 619
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
A++ + E+ P + E++V+I+G+ + AS A
Sbjct: 620 GATVTLA--EDRPDIL---EKVVRISGTPEQASKA 649
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 115/172 (66%), Gaps = 13/172 (7%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
E+ V+R LCP +KIGS+IG+ G I+K L+ + + I+I++ VPG DERI+ I ++
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISAN----E 75
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ ED+ +SPAQ+AL + +IV L D+ G +IT ++L+P++Q GC++GKGG
Sbjct: 76 VLEDN---LSPAQEALLHIQSQIV---DLGPDKDG---VITTKLLIPSNQTGCLLGKGGA 126
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I +R +TRA IRIL E LP CAL DE++Q+ G+ R ALVQ+ SRL
Sbjct: 127 IISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRL 178
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 5/175 (2%)
Query: 250 YSARRDEAS--AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
Y AR E S E R++CP IG VIG+ G IIK ++ + GA IK+ + D+
Sbjct: 8 YHARDYEPSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDER 67
Query: 308 IIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
II IS E ED SP A L +Q + + + G VITT++L+PS Q GCL+G+GG
Sbjct: 68 IIIISANEVLEDNLSPAQEALLHIQSQIVDLGPDKDG--VITTKLLIPSNQTGCLLGKGG 125
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
AIISEMR TRA+IRIL E++P A + +EMVQI G + A +AL QVT RLR+
Sbjct: 126 AIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRS 180
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 211/448 (47%), Gaps = 47/448 (10%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI---YSSSEGTNL 102
+R +C +G +IG G IV QLR ET I + V G D+R++ + S +G L
Sbjct: 41 FRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKGIVL 100
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ E VS AQ+ + RV DR+ +S E G + ++L + Q+G ++GKGG+
Sbjct: 101 GDREME-VSNAQEGVVRVFDRVWGLES----EKGGNGEVYGKLLAHSSQVGAIVGKGGKN 155
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
I NIR + + IR+ H CA +EL+ + GE V+KAL+ ++ L + P +
Sbjct: 156 ISNIRNNSGSNIRVCPAPH---CAAKDEELILITGESLAVKKALIYVSYCLQDCPPMGKV 212
Query: 223 LLLS---------SSSNIYQSSGVYLSAPL---------------VGSYGNYSARRDEAS 258
L + S+S ++ +L++ L + GN S+ + S
Sbjct: 213 SLNTPPTINSSDRSTSYTHEDLFPHLNSWLPSMEGLSINDASKQTTNANGN-SSLDSKGS 271
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
RL+C G VIGK G I++ +GASI + ++ I+ IS E E
Sbjct: 272 GHAVVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISAFENLE 331
Query: 319 DP-SPTITAALRLQPRCSEKTERESGDPV------ITTRILVPSAQIGCLIGRGGAIISE 371
SP A + + R +E R P +T R+L+ ++ + L G G +ISE
Sbjct: 332 SSNSPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQVISE 391
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALA 431
+R + A I++L E +P A +++ +VQITG +AL ++T +R N E L
Sbjct: 392 LRQVSGADIQLLHGEPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNE--LL 448
Query: 432 AHPPVLPYVPMSLDITDGSKYGNRDNQS 459
A + P P++ D T SK+ R S
Sbjct: 449 AEAKIKPSFPLNKD-TVRSKFITRKKSS 475
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 135/308 (43%), Gaps = 54/308 (17%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
V+R LC GS+IGK G IV+ T ++I + + +ERIVTI + FE
Sbjct: 276 VFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTISA-------FE 328
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI----TVRMLVPADQIGCVIGKGG 160
+ SPAQDA+ V RI AED + + F T + T R+L+ + + G G
Sbjct: 329 NLESSNSPAQDAVILVFTRI-AEDHIRNG-FQPATAVESPVTARLLITTSTLHLLTGNEG 386
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP--- 217
QVI +R + A I++L E +P A D ++Q+ G V AL +I S + +NP
Sbjct: 387 QVISELRQVSGADIQLLHGEPIP-NASDNDVVVQITGGYRCVENALRKITSIIRDNPLTN 445
Query: 218 ------------------SRSQHLLLSSSSNIY-----QSSGVYLSAPLVGSYGNYSARR 254
RS+ + SS + Q++GVY A V G
Sbjct: 446 ELLAEAKIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVY-QAKKVTENGESHTNL 504
Query: 255 DE----------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
E A+ ++ ++ G V G+ GG + +IRQ SGA + V S+G
Sbjct: 505 IENVEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTG 564
Query: 302 AEGDDCII 309
G +I
Sbjct: 565 TSGGKVVI 572
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 88/170 (51%), Gaps = 13/170 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----STKE- 315
+ + RLVC + +GG+IG G I+ Q+R+E+G I + + DD +I + S ++
Sbjct: 38 QIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSDRKG 97
Query: 316 -FFEDPSPTITAA----LRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
D ++ A +R+ R + G+ + ++L S+Q+G ++G+GG IS
Sbjct: 98 IVLGDREMEVSNAQEGVVRVFDRVWGLESEKGGNGEVYGKLLAHSSQVGAIVGKGGKNIS 157
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+R+ + ++IR+ P A +DEE++ ITG AL V+ L+
Sbjct: 158 NIRNNSGSNIRVCP---APHCAAKDEELILITGESLAVKKALIYVSYCLQ 204
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 114/153 (74%), Gaps = 11/153 (7%)
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFEDSGE-FVSPAQDALFRVHDRIVAEDSLADDEF 135
+R++E +PGCDER+VTIYS+SE N ED E FV PA DALF+VHD +V E+ DD++
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 136 GEL-------TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC--A 186
+ T++TVRMLVP+DQIG +IGKGG +IQ +R +T AQIR+ ++++LP+C A
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALA 119
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
LS DELLQ+ G+P+ VR+AL Q+A L+ NPSR
Sbjct: 120 LSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK--VAYEDEEMVQ 400
G V+T R+LVPS QIG LIG+GG II +R+ T A IR+ N+N+P +A +E++Q
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALALSHDELLQ 127
Query: 401 ITGSLDVASSALSQVTLRLRAN 422
I G AL QV L N
Sbjct: 128 IIGDPSAVREALYQVAFLLYNN 149
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGC 86
R L P +IG +IGKGG I++ LR++T + IR+ ++ +P C
Sbjct: 76 RMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMC 116
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 202/424 (47%), Gaps = 40/424 (9%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI---YSSSEGTNL 102
+R +C +G +IG G IV QLR ET I +++ ++R++ + S +G L
Sbjct: 52 FRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKGLQL 111
Query: 103 FEDSGEF-VSPAQDALFRVHDRIV---AEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
D GE VS AQ+A+ RV +R+ AE + + + + ++L QIG V+GK
Sbjct: 112 -GDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFS-KLLAHTSQIGAVVGK 169
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG+ I IR T A+IR+ P CA +EL+ + G V+KAL+ ++ L + P
Sbjct: 170 GGKNITAIRNSTGAKIRVCPP---PQCATKDEELVLITGGILAVKKALISVSHCLQDCPP 226
Query: 219 RSQHLLLSS----------SSNIYQSSGVYLSAPLVGSYG----------NYSARRD-EA 257
+ + SS SS+ L++ L G N S+ RD +
Sbjct: 227 LCKVPVSSSIPTVSSFDRSSSDPNAELFPRLNSLLTSMEGLSIYERTTNSNESSNRDSKG 286
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFF 317
E RL+C G VIGK G I++ + ++GASI + +E + I+ IS E
Sbjct: 287 GEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESL 346
Query: 318 ED-PSPTITAALRLQPRCSEK------TERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
E SP A + + R E + S + +T R+LV ++ + G G +I
Sbjct: 347 ESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVIL 406
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
E+R T A I+IL E+VP A +D+ +VQITG +AL ++T R+R N E
Sbjct: 407 ELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIRDNLSPNEAVT 466
Query: 431 AAHP 434
A P
Sbjct: 467 EARP 470
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 138/311 (44%), Gaps = 51/311 (16%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS--SS 97
G + V+R LC GS+IGK G IV+ L S+T ++I + + ERIVTI + S
Sbjct: 287 GEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESL 346
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGC 154
E N SPAQDA+ V RI+ ED + ++ +T R+LV +
Sbjct: 347 ESCN---------SPAQDAVILVFARII-EDHIGKGFLQVSSMESPVTARLLVATSTVNS 396
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
G GQVI +R T A I+IL E +P A D ++Q+ GE V+ AL +I SR+
Sbjct: 397 WSGNEGQVILELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQNALYKITSRIR 456
Query: 215 ENPSRSQHLLLSSSSNIYQ------------------SSGVYL------SAPLVGSYGNY 250
+N S ++ + + + ++ SG +L A + G
Sbjct: 457 DNLSPNEAVTEARPKSNWKVNKDPVKGKPFSRGKSAFPSGRFLPRNAGVHAETILQNGEL 516
Query: 251 SARRDE----------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--D 298
E A+ ++ ++ G V G+ GG + +IRQ SGA++ V
Sbjct: 517 HTDLSENLERGRGNMFATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGATVTVYDP 576
Query: 299 SSGAEGDDCII 309
S G G +I
Sbjct: 577 SVGTSGGKVVI 587
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 90/174 (51%), Gaps = 22/174 (12%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF----ISTKEF 316
+ + RLVC A +GG+IG G I+ Q+R+E+ I + S + +D +I +S ++
Sbjct: 49 QIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDRVILVIGSVSPRKG 108
Query: 317 FE-------DPSPTITAALRLQPRCSEKTERESG-------DPVITTRILVPSAQIGCLI 362
+ + S A +R+ R E E G + + +++L ++QIG ++
Sbjct: 109 LQLGDGGEVEVSSAQEAIVRVFERV-WGLEAEKGVNSNRAVNSEVFSKLLAHTSQIGAVV 167
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
G+GG I+ +R++T A IR+ P+ A +DEE+V ITG + AL V+
Sbjct: 168 GKGGKNITAIRNSTGAKIRVCPP---PQCATKDEELVLITGGILAVKKALISVS 218
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 221/480 (46%), Gaps = 81/480 (16%)
Query: 22 NGGSKRRNPGDETEQ-RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
NG SKR P +Q I + +R LC +IG +IGK G ++K L+ T + IRI
Sbjct: 25 NGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIE 84
Query: 81 ETVPGCDERIVTIYSSS--EGTNLFED---SGEF--VSPAQDALFRVHDRI--------- 124
++ +R++ + +S +G + GE VS AQ+AL RV DRI
Sbjct: 85 DSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEG 144
Query: 125 ------------VAEDSLADDEFGELTLIT--------VRMLVPADQIGCVIGKGGQVIQ 164
VA+ + A G+ + ++ V D + I +VI+
Sbjct: 145 IELGDRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKDNLPACISSPDEVIE 204
Query: 165 ------NIRTETRAQIRILKD------------------EHLPLCALSFDELLQVAGEPA 200
+++ A R L+D H L + + L+ V E
Sbjct: 205 IEGSVSSVKKALVAVSRNLQDRHHADRTKMTGQNSHEVIHHEALVGVPRETLMSVPRETF 264
Query: 201 V--VRKALVQIA----SRLHEN---PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ R+ L + + LH + RS +L SSSN Y ++GV+ L S
Sbjct: 265 IGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSSSNSY-ATGVH---SLSAEVNRVS 320
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+ +A +E + +++C IGGVIGKGG II+ ++ E+GA++ V S AE +D +I I
Sbjct: 321 SLEPKAHQQEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI 380
Query: 312 STKEFFEDP-SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGR 364
+ E E SP A + + R E + D +T +++V S Q+GCL+G+
Sbjct: 381 TASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGK 440
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
GG I+SEMR AT ASIRI+ + V K A +++++VQI+G AL T RLR N F
Sbjct: 441 GGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 500
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 127/447 (28%), Positives = 217/447 (48%), Gaps = 60/447 (13%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS-------- 95
++R L + ++G +IGK G +++QL+ T S I + + R++TI +
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 96 ---------SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
S+ ++ VS AQ AL RV + + + FG + ++ R+L
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL-------NVRFGTSSTVSSRLL 136
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+ A + VIGKGG++++ IR ET + I + +LP CA D ++++ G V+K L
Sbjct: 137 MEACHVVTVIGKGGELMEMIRKETGCNVEICQ-YNLPSCADPDDVMVKIEGNVFAVKKVL 195
Query: 207 VQIASRLHENPSRSQHLLLSSSSN----------IYQSSGVY---LSA---------PLV 244
V I+SRL S + ++ + N +Y++S V+ +S PL
Sbjct: 196 VSISSRLQACQSIFKKKMVGNPHNMQTNVVPREALYRASNVFQGDISVSRLKHRELDPLE 255
Query: 245 GSYGNYS-ARRD-EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
+ N S R+D E + ++ L+++C IG VIG G I+ ++ E+GA I + S+
Sbjct: 256 SLHRNLSQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRL 315
Query: 303 EGDDCIIFISTKEFFEDP----SPTITAALRLQPRCSEKTERESGDP----VITTRILVP 354
+ D+ + I+ E DP SP+ A + + + E T + D IT R++V
Sbjct: 316 DCDEGLFTITASE---DPNAKNSPSQRALVLVFSKMYENTTAKVLDSGLTSSITARLVVR 372
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
S QI CL+G G I S ++ T A I +L E PK E+ ++VQI+G+ A++Q
Sbjct: 373 SNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQ 432
Query: 415 VTLRLRANTFEREGALAAHPPVLPYVP 441
VT LR + + + +H PV + P
Sbjct: 433 VTSMLREDLINQSFQMGSHFPVNYFNP 459
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 10/213 (4%)
Query: 4 QSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGG 63
Q +I+ + H + D + P ++E + V + LC +IG +IG G
Sbjct: 238 QGDISVSRLKHRELDPLESLHRNLSQPRKDSED---NKQQVVLKILCSKERIGRVIGNGR 294
Query: 64 EIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR 123
++ L+SET + I + CDE + TI +S ED SP+Q AL V +
Sbjct: 295 ATIRDLQSETGAFITLGSNRLDCDEGLFTITAS-------EDPNAKNSPSQRALVLVFSK 347
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
+ + + G + IT R++V ++QI C++G+ G + I+ T A I +L E P
Sbjct: 348 MYENTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNP 407
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
C ++++Q++G V++A+ Q+ S L E+
Sbjct: 408 KCVSENNQIVQISGAFPNVKEAINQVTSMLRED 440
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 91/120 (75%), Gaps = 10/120 (8%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+TVR+LVP++QIGCVIGKGGQ+IQ+IR+E+ AQIRILKD+HLP C+LS +EL+Q++ EP
Sbjct: 283 VTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPF 342
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLS----------APLVGSYGNY 250
+VRK L QIASRLH+NPSRSQHL + Y SSG + APLVG+YG Y
Sbjct: 343 IVRKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAPIIGLAPLVGTYGGY 402
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+T R+LVPS QIGC+IG+GG II +RS + A IRIL ++++P + E++QI+
Sbjct: 283 VTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPF 342
Query: 407 VASSALSQVTLRLRAN 422
+ L Q+ RL N
Sbjct: 343 IVRKILYQIASRLHDN 358
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D A + ++RL+ P+ IG VIGKGG II+ IR ESGA I++
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI 318
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGC 86
G+++E+ + R L P +IG +IGKGG+I++ +RSE+ + IRI + +P C
Sbjct: 274 GEDSEE----ANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSC 327
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 206/424 (48%), Gaps = 52/424 (12%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T +R LCP K S V ++R ++ + + + G R++ + +G
Sbjct: 85 TSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVI---ETVDGARRE 138
Query: 104 ED-SGEFVSPAQDALFRVHDRIV---AEDSLADDEFG-------ELTLITVRMLVPADQI 152
D SPAQ+AL VH RI+ A+D D E+G + T R++VP +
Sbjct: 139 ADGCPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGKTTTRLIVPKQHV 198
Query: 153 GCVIGKGGQVIQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
GC++GKGG++I+ +R ET+ IRIL + +H P C S +E++QV G+ V+KA+ I
Sbjct: 199 GCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITD 258
Query: 212 RLHENPSRSQH----LLLSSSSNIYQSS----GVYLSAPLVGSYGNYSARRDEASAR--- 260
RL E+ R + L S I Q GV V S G R+ S
Sbjct: 259 RLKESLHRDRGPFRGRLNSPEPRISQEDEYLGGVQQMPAYVESLGGPDQIRNNISMEPPG 318
Query: 261 -------------------EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ R++CP ++ GI++ ++ + G +++
Sbjct: 319 YVFDSNGGKVIEHPDILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDIT 378
Query: 302 AEGDDCIIFISTKEFFE-DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGC 360
++ D+ ++ I+++E + + P A L +Q + D +ITTR+LVP+++I C
Sbjct: 379 SDSDERVLIITSREGPDHELFPAQEAVLHIQTHIVDLGP--DMDNIITTRLLVPASEIAC 436
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
GR G++ S+++ T A+++IL E++P A E +E++QI G + A +AL QVT +LR
Sbjct: 437 FDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLR 495
Query: 421 ANTF 424
+ +
Sbjct: 496 SFLY 499
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 18/187 (9%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
N G E I ED ++R LCP K S++ I++ L+++ ++R+S+ DE
Sbjct: 324 NGGKVIEHPDILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDE 383
Query: 89 RIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
R++ I +S EG + LF PAQ+A+ + IV D+ +IT R+L
Sbjct: 384 RVLII-TSREGPDHELF--------PAQEAVLHIQTHIVDLGPDMDN------IITTRLL 428
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
VPA +I C G+ G + +I+ +T A ++IL E LP CAL DEL+Q+ GE R AL
Sbjct: 429 VPASEIACFDGREGS-LSDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNAL 487
Query: 207 VQIASRL 213
+Q+ ++L
Sbjct: 488 IQVTTKL 494
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 32/193 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---------------DSSGAEGDDC 307
S R++CP G + ++R +SGA + V D + E D C
Sbjct: 86 SFRILCPECK---AYSFSPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGC 142
Query: 308 ---------IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQI 358
+ + + E + PR + +R TTR++VP +
Sbjct: 143 PPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRGK----TTTRLIVPKQHV 198
Query: 359 GCLIGRGGAIISEMRSATRASIRILTN-ENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
GCL+G+GG II +MR T+ IRIL+ ++ P+ EE+VQ+ G + A++ +T
Sbjct: 199 GCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIITD 258
Query: 418 RLRANTFEREGAL 430
RL+ + G
Sbjct: 259 RLKESLHRDRGPF 271
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 147/270 (54%), Gaps = 32/270 (11%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R ++D ++R + P R+IG +IGK G ++++R ETK+ I+I++ + +ER++ I S
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF----GELTLITVRMLVPADQ 151
+DS +S A++AL +V I+ ED D G + +R+L+ Q
Sbjct: 112 --------KDSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQ 163
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
GC+IG GQ I+ +R + A I IL LPLCA + D ++Q++G+ V KAL +I
Sbjct: 164 AGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEI 223
Query: 210 ASRLHENPSRSQHLLLSS--SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLV 267
+L ENP R Q + +S + N ++S YL D ASA +L ++
Sbjct: 224 GCQLRENPPR-QVISISPIYNPNTNRTSQQYL---------------DPASADYVTLNMM 267
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P +GG+IG+ G I +IR ESGA IKV
Sbjct: 268 IPETLVGGLIGRCGSNISRIRNESGAMIKV 297
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
++ + + A ++ R+V P+ IG VIGK G I++IR+E+ A+IK+ + A ++ +
Sbjct: 47 DHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERV 106
Query: 309 IFISTKE---FFEDPSPTI--TAALRLQPRCSEKTERESGDPVITT---RILVPSAQIGC 360
I IS+K+ D + A+L L+ S + G + R+L+ +Q GC
Sbjct: 107 IIISSKDSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGC 166
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I ++R+++ A+I IL +P A++ + MVQI+G + AL ++ +
Sbjct: 167 LIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQ 226
Query: 419 LRAN 422
LR N
Sbjct: 227 LREN 230
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 54/283 (19%)
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
VA+D + + + R++VP+ QIG VIGK G IQ IR ET+A I+I
Sbjct: 44 VADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIAD------ 97
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENP-SRSQHLLLSSSSNIYQSSGVYLSAPL 243
A++ E + ++ I+S+ EN S +++ LL +S I + A
Sbjct: 98 -AIARHE------------ERVIIISSKDSENVISDAENALLQVASLILKEDDSNTDALK 144
Query: 244 VGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV------ 297
VG G+ A ++RL+ G +IG G I+++R SGA+I +
Sbjct: 145 VG-VGHVVAN---------AIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQL 194
Query: 298 -DSSGAEGDDCIIFISTK-------------EFFEDPSPTITAALRLQPRCSEKTERESG 343
+ A D ++ IS + E+P + + + + +T ++
Sbjct: 195 PLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISISPIYNPNTNRTSQQYL 254
Query: 344 DPV----ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
DP +T +++P +G LIGR G+ IS +R+ + A I++
Sbjct: 255 DPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKV 297
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 147/270 (54%), Gaps = 32/270 (11%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R ++D ++R + P R+IG +IGK G ++++R ETK+ I+I++ + +ER++ I S
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF----GELTLITVRMLVPADQ 151
+DS +S A++AL +V I+ ED D G + +R+L+ Q
Sbjct: 112 --------KDSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQ 163
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
GC+IG GQ I+ +R + A I IL LPLCA + D ++Q++G+ V KAL +I
Sbjct: 164 AGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEI 223
Query: 210 ASRLHENPSRSQHLLLSS--SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLV 267
+L ENP R Q + +S + N ++S YL D ASA +L ++
Sbjct: 224 GCQLRENPPR-QVISISPIYNPNTNRTSQQYL---------------DPASADYVTLNMM 267
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P +GG+IG+ G I +IR ESGA IKV
Sbjct: 268 IPETLVGGLIGRCGSNISRIRNESGAMIKV 297
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 99/184 (53%), Gaps = 10/184 (5%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
++ + + A ++ R+V P+ IG VIGK G I++IR+E+ A+IK+ + A ++ +
Sbjct: 47 DHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERV 106
Query: 309 IFISTKE---FFEDPSPTI--TAALRLQPRCSEKTERESGDPVITT---RILVPSAQIGC 360
I IS+K+ D + A+L L+ S + G + R+L+ +Q GC
Sbjct: 107 IIISSKDSENVISDAENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGC 166
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I ++R+++ A+I IL +P A++ + MVQI+G + AL ++ +
Sbjct: 167 LIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQ 226
Query: 419 LRAN 422
LR N
Sbjct: 227 LREN 230
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 54/283 (19%)
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
VA+D + + + R++VP+ QIG VIGK G IQ IR ET+A I+I
Sbjct: 44 VADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIAD------ 97
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENP-SRSQHLLLSSSSNIYQSSGVYLSAPL 243
A++ E + ++ I+S+ EN S +++ LL +S I + A
Sbjct: 98 -AIARHE------------ERVIIISSKDSENVISDAENALLQVASLILKEDDSNTDALK 144
Query: 244 VGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV------ 297
VG G+ A ++RL+ G +IG G I+++R SGA+I +
Sbjct: 145 VG-VGHVVAN---------AIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQL 194
Query: 298 -DSSGAEGDDCIIFISTK-------------EFFEDPSPTITAALRLQPRCSEKTERESG 343
+ A D ++ IS + E+P + + + + +T ++
Sbjct: 195 PLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISISPIYNPNTNRTSQQYL 254
Query: 344 DPV----ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
DP +T +++P +G LIGR G+ IS +R+ + A I++
Sbjct: 255 DPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKV 297
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 155/316 (49%), Gaps = 46/316 (14%)
Query: 183 PLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV----- 237
PL S D +++G + RKAL+ +++ L +NP S SGV
Sbjct: 60 PLPMASPDS--EISGSFSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPG 117
Query: 238 --------YLSAPLVGSYG--NYSARRDEASAR-----EFSLRLVCPAGNIGGVIGKGGG 282
YL P V Y N+S+ R E R++C +GGVIGKGG
Sbjct: 118 VDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGKGGS 177
Query: 283 IIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERE 341
I+ ++ E+GAS+KV A+ D+ II IS +E E SP+ A LR+ + SE + +
Sbjct: 178 TIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMDK 237
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
S + R+LVP+ IGCL+G+GG+II+EMR T ASIRI NE +P+ A ++E+VQ+
Sbjct: 238 SSS--VPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQV 295
Query: 402 TGSLDVASSALSQVTLRLR----ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRD- 456
TGS AL +T R+R G + +PPV GN
Sbjct: 296 TGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMPPYPPV----------------GNPSH 339
Query: 457 NQSRGRGNSYATGNLP 472
+QSR S+ +G +P
Sbjct: 340 HQSRQEAPSHHSGGMP 355
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 129/255 (50%), Gaps = 27/255 (10%)
Query: 4 QSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGG 63
S +Y H A N S PG R ++ V+R +C +G +IGKGG
Sbjct: 121 HSQRSYLPPPHVPDYHARNFSSNGAAPGP----RFFVEQEIVFRMICLNDMVGGVIGKGG 176
Query: 64 EIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR 123
++ L+SET +++++ + V DERI+ I + E+S SP+QDAL RV+ +
Sbjct: 177 STIRALQSETGASVKVIDPVADSDERIIVISAR-------ENSEMMRSPSQDALLRVYSK 229
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
I ++ + + + R+LVPA IGC++GKGG +I +R T A IRI +E +P
Sbjct: 230 I------SEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIP 283
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL 243
CA DEL+QV G ++ AL+ I R+ + L++ + SG P
Sbjct: 284 RCAQRNDELVQVTGSFQSIQDALLHITGRIRD-------LIIPPKPH---PSGGMPPYPP 333
Query: 244 VGSYGNYSARRDEAS 258
VG+ ++ +R++ S
Sbjct: 334 VGNPSHHQSRQEAPS 348
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 186/383 (48%), Gaps = 35/383 (9%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS---EGTNL 102
+R +C KIG++IG G ++ Q+R ET + E V G + R + + S+ +
Sbjct: 28 FRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPERKIAV 87
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLAD--DEFGELTLITVRMLVPADQIGCVIGKGG 160
ED VS AQ+A+ RV +R+ D++ D D G L L QIG V+G+ G
Sbjct: 88 GEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGL-----LANTSQIGAVVGREG 142
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV-VRKALVQIASRLHENPSR 219
+ I+ ++ + A I IL PLCAL D+L+Q+ G V V+KA++ I S L + P
Sbjct: 143 RNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVKKAVIAITSCLQDCPPY 199
Query: 220 SQ-HLLLS----------SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE---FSLR 265
+ + LS SS + + +L + L N + +D E R
Sbjct: 200 EKDEVDLSLEAVRRRRSGSSGDPHAEFFPHLCSLLPTYSENIATDKDHKKPNEQLQVQFR 259
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTI 324
++CP G G +IGKGG +++ ++ ++GASI + D ++ +S E E SP
Sbjct: 260 MICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDGRLVTVSALENLESSHSPAQ 319
Query: 325 TAALRLQPRCSEK-TERESG-----DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
A L + R E ER + +T +L+PS ++ CLI RGG I SEM T A
Sbjct: 320 NALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMIETTGA 379
Query: 379 SIRILTNENVPKVAYEDEEMVQI 401
I+IL + A ++ ++Q+
Sbjct: 380 DIQILQGDQFFYCASNNDVVLQV 402
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS--GAEGDDCIIFISTK---- 314
+ + R+VC A IG +IG G +I QIR E+G + + + G+E ++ S
Sbjct: 25 QVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASPERK 84
Query: 315 -EFFEDPSPTITAALRLQPRCSEKTE-----RESGDPVITTRILVPSAQIGCLIGRGGAI 368
ED + ++AA R E+ ++ GD +L ++QIG ++GR G
Sbjct: 85 IAVGEDETVEVSAAQEAVVRVLERMWEVDAVKDGGDCEGYCGLLANTSQIGAVVGREGRN 144
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
I M+ A+ A I IL P A ++++++QITGS VA
Sbjct: 145 IKRMKRASGAHIWILP---APLCALKEDQLIQITGSSTVA 181
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 131/249 (52%), Gaps = 25/249 (10%)
Query: 30 PGDE---TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
PG E R + E+ V++ LC K+GS+IGKGG I++ L+SET ++I+I++ P
Sbjct: 407 PGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDS 466
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
DER+V I S+ E L + SPAQDA+ RVH RI A+ F + R+L
Sbjct: 467 DERVVVI-SAREACTLTNXEQKH-SPAQDAVIRVHCRI------AEIGFEPGAAVVARLL 518
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
V + QIGC++GKGG +I +R T A IRI E +P C DEL+QV G V+ AL
Sbjct: 519 VHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDAL 578
Query: 207 VQIASRLHENPSRSQHLLLSSSSNI----YQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
I SR+ E + L S SN+ Y SS + P+ + R D AS +
Sbjct: 579 FCITSRIRE----TIFPLKPSISNVNGPPYMSSFPEIPPPM------FRPRHDPASPGHY 628
Query: 263 SLRLVCPAG 271
S + P G
Sbjct: 629 SSPVGVPHG 637
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 198/451 (43%), Gaps = 67/451 (14%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSS 96
+G+ R L P ++G ++G+GG+IV+++R E+ + IR+ + +P C +
Sbjct: 178 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPAC---------A 228
Query: 97 SEGTNLFEDS--GEFVSPAQDALFRVHDRIVAED--SLADDEFGELTLITVRMLVPADQI 152
S G L + S + R + E + + GE+ + R+
Sbjct: 229 SPGDELIQGSMKRKGGVGRVVGGCCCCSRALREGYGVVLWKKLGEVETLLRRLQ------ 282
Query: 153 GCVIGKGGQVIQNIRTETRAQI----------RILKDEHLPLCALSFDELLQVAGEPAVV 202
G VI G + I R R LK P + + G V
Sbjct: 283 GQVIKGGAEDIMGSRLSKGCSFAVKSFYSLASRFLKG--FPTSIMWNPWGPNITGTFPAV 340
Query: 203 RKALVQIASRLHENP--SRSQHLLLSSSSNIYQSSGV--------------YLSAPLVGS 246
RKAL+ ++S L +NP + + + +G+ L P S
Sbjct: 341 RKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSSLHGPDYHS 400
Query: 247 YG--------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
G N A E +L+C +G +IGKGG II+ ++ E+GASIK+
Sbjct: 401 RGYSSMPGPENIGANHRMVLEEEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIA 460
Query: 299 SSGAEGDDCIIFISTKEFF------EDPSPTITAALRLQPRCSEKTERESGDPVITTRIL 352
+ + D+ ++ IS +E + SP A +R+ R +E E G V+ R+L
Sbjct: 461 DAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRVHCRIAE-IGFEPGAAVVA-RLL 518
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
V S QIGCL+G+GG IISEMR AT ASIRI E VPK +++E+VQ+ GSL AL
Sbjct: 519 VHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDAL 578
Query: 413 SQVTLRLRANTFEREGALA--AHPPVLPYVP 441
+T R+R F + +++ PP + P
Sbjct: 579 FCITSRIRETIFPLKPSISNVNGPPYMSSFP 609
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 103/181 (56%), Gaps = 30/181 (16%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS------ 97
++R LCP K G +IGKGG I++Q R +T + IRI ++V GCDER++ I + +
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 98 -------------EGTNLFEDSGEFV-------SPAQDALFRVHDRIVAEDSLADDEFGE 137
E NL S V SPAQ AL RV +RI+ D +++ +
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 138 LTL----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
L + R+L P++Q+GCV+G+GG++++ IR E+ AQIR+L +H+P CA DEL+
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 194 Q 194
Q
Sbjct: 236 Q 236
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 42/186 (22%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----- 311
A+ + R++CPA GGVIGKGG II+Q R+++GA I++D S D+ +I I
Sbjct: 51 AAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAV 110
Query: 312 -STKEFF----------------------------EDPSPTITAALRLQPRC-------- 334
S +E ++ SP A +R+ R
Sbjct: 111 KSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEERE 170
Query: 335 SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYE 394
++ + + G+ + R+L PS Q+GC++GRGG I+ ++R + A IR+L +++P A
Sbjct: 171 EKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASP 230
Query: 395 DEEMVQ 400
+E++Q
Sbjct: 231 GDELIQ 236
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE--LLQVAGE 198
+ R+L PA + G VIGKGG +I+ R +T A+IRI D+ + L DE +L VA
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSV----LGCDERVILIVADA 109
Query: 199 PAVVRKALVQIASRLHE------------NP--------SRSQHLLLSSSSNIYQSSGVY 238
R+A + ++ NP S +Q L+ I +
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEER 169
Query: 239 LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
GN + RL+ P+ +G V+G+GG I+++IRQESGA I+V
Sbjct: 170 EEKEKKEDLGNVA----------VCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV 218
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 72/325 (22%)
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHEN------------PSRSQHLLLSSSSNIYQS 234
+ FD + + GE V++AL ++S +++ P +++ S Y
Sbjct: 1 MEFDNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPH 60
Query: 235 SGVYLSA-PLV------------------------GSYGNYSARR-------DEASAREF 262
G+Y S+ P++ ++ YS+ D + + E
Sbjct: 61 GGLYPSSDPIIPPRAVPQIMGGTNIQDVQGYADIGNTWPLYSSALPVVSGGVDASQSEEL 120
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PS 321
+R++CP+ IG VIG+GG IK +RQ SG I+VD S A D+C+I I+T E D S
Sbjct: 121 IIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKS 180
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
+ A L +Q + S++ + E ++ ++LVPS IGC+IG+ G+II+E+R TRA IR
Sbjct: 181 MAVEAVLLIQGKISDEDDTE-----VSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIR 235
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-ERE------------- 427
I + + PK A ++E+V++ G++D AL Q+ LRLR + ER+
Sbjct: 236 I-SKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRERDTGHNPTIGGESLY 294
Query: 428 --GALAAHPPVLPYV-----PMSLD 445
GA + PP+LP V PM D
Sbjct: 295 SGGAAYSLPPMLPSVSSVAAPMVYD 319
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 148/322 (45%), Gaps = 64/322 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IG+GG +K +R + + I + ++ DE ++ I ++
Sbjct: 117 SEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTT---- 172
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + S A +A+ + +I ED T +++++LVP+ IGC+IGK G
Sbjct: 173 ---ESPSDLKSMAVEAVLLIQGKISDEDD---------TEVSIQLLVPSKVIGCIIGKSG 220
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I IR TRA IRI K + P CA DEL++V G VR AL+QI RL ++ R
Sbjct: 221 SIINEIRKRTRADIRISKGDK-PKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRE 279
Query: 221 Q---HLLLSSSSNIYQSSGVY-----------LSAPLV---------------------- 244
+ H ++Y Y ++AP+V
Sbjct: 280 RDTGHNPTIGGESLYSGGAAYSLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGY 339
Query: 245 -----------GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
GS +Y + + +L ++ PA +G V+GKGG I IR+ SGA
Sbjct: 340 GSLSQMWESGYGSISSYPTKLYGSLPPPSTLDILIPANAVGKVLGKGGANIANIRKISGA 399
Query: 294 SIKVDSSGAEGDDCIIFISTKE 315
+I++ + A GD + T E
Sbjct: 400 TIEISDARARGDRIALISGTPE 421
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 53/285 (18%)
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRS------------------QHLLLSSS 228
+SFD +Q+ G+ VRKAL +++ +++ PS+ L + S
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 229 SNIYQSSGVYLSA-----PLVGSYGNYSARRDEASAR----------------------- 260
SN Y S +S+ ++GS + A A
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSG 120
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E LR++CPAG IG VIGKGG IK IR+ESGA I VD S + ++ II I++ E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 321 -SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
S + A L LQ + ++ E + + R+LVP IGCLIG+GG+I+++MRS T+A+
Sbjct: 181 KSAAVEAVLLLQSKINDDNEGK-----MNLRLLVPGKVIGCLIGKGGSIVNDMRSKTKAA 235
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I I E P+ A +E+V++ G ++ AL Q+ LRLR +
Sbjct: 236 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL 279
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 67/306 (21%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S + V R LCP KIG +IGKGG +K +R E+ + I + ++ +E I+TI +S+E T
Sbjct: 119 SGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITI-TSNEAT 177
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + S A +A+ + +I DD G++ L R+LVP IGC+IGKGG
Sbjct: 178 D------DAKSAAVEAVLLLQSKI------NDDNEGKMNL---RLLVPGKVIGCLIGKGG 222
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL------- 213
++ ++R++T+A I I K E P A S DEL++V GE +R ALVQI RL
Sbjct: 223 SIVNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRD 281
Query: 214 ---HENPSRSQHLLLSSSSNIYQSS----------------------------GVYLSAP 242
+N + L ++++ +Y SS VY +
Sbjct: 282 SVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSS 341
Query: 243 LVGSYGNYSARRDEASA-----------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
L G Y + A D SA R + + PA + V+GK G + I + S
Sbjct: 342 LYG-YSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDNIIKIS 400
Query: 292 GASIKV 297
GA I++
Sbjct: 401 GAHIEI 406
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 153/321 (47%), Gaps = 63/321 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
SE+ + R LCP KIG +IG+GG +K +R + +++ + +T DE ++T+ S+
Sbjct: 116 SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST---- 171
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + S A +A+ + +I ED DD + +R+LVP+ IGC+IGK G
Sbjct: 172 ---ESVDDLKSMAVEAVLLLQAKINDED---DDT------VAIRLLVPSKIIGCIIGKSG 219
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I IR TRA +RI K E P CA + DEL++V GE VR ALVQI RL ++ +
Sbjct: 220 SIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKD 278
Query: 221 Q---HLLLSSSSNIYQS------SGVYLSAPLV--------------------------- 244
+ H + + ++Y S V SAP V
Sbjct: 279 RDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLYGYG 338
Query: 245 ---------GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
GS +YS++ + +V PA +G V+GKGG I IR+ SGA I
Sbjct: 339 SLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVI 398
Query: 296 KV-DSSGAEGDDCIIFISTKE 315
++ DS + GD + T E
Sbjct: 399 EISDSKSSRGDRVALISGTPE 419
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 64/290 (22%)
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ------------HLLLSSSSNIYQS 234
+ FD + +AG+ V+KAL I++ +++ R + +++ S IY +
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPA 60
Query: 235 SGVYLSA--------------------------------------PLVGSYGNYSARRDE 256
G Y SA P+V YG A R E
Sbjct: 61 GGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYG---ASRSE 117
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
E +R++CP IG VIG+GG IK +R+ SGA ++VD + A+ D+C+I +++ E
Sbjct: 118 ----ELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTES 173
Query: 317 FED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+D S + A L LQ + +++ D + R+LVPS IGC+IG+ G+II+E+R
Sbjct: 174 VDDLKSMAVEAVLLLQAKINDE-----DDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKR 228
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
TRA +RI +E PK A ++E++++ G + AL Q+ LRLR + +
Sbjct: 229 TRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALK 277
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 151/295 (51%), Gaps = 38/295 (12%)
Query: 18 DAATNGGSKRRN---------PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
D A + G +RR+ P +R G +D ++R + P R+IG +IGK G +++
Sbjct: 68 DTAPSSGKRRRDDENSGTASAPEQSAAKRAKG-QDVIFRIVVPSRQIGKVIGKEGHRIQK 126
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+R +TK+ I+I++ + +ER++ I S +D+ E V+ A+ AL ++ I+ ED
Sbjct: 127 IREDTKATIKIADAIARHEERVIIISS--------KDNDEKVTDAEKALEQIAHLILKED 178
Query: 129 SLADD----EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
+ D G + T+R+L+ Q G +IG GQ I+ +R + A I +L LPL
Sbjct: 179 DSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPL 238
Query: 185 CALSF--DELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP 242
CA + D ++Q++G+ V KAL +I +L ENP R + S S Y + + S P
Sbjct: 239 CASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQ----VISISPTYNYAAIRPSQP 294
Query: 243 LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ D S + ++ +GG+IG+ G I +IR ESGA IKV
Sbjct: 295 YL----------DPTSVDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKV 339
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 25/210 (11%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
A ++ R+V P+ IG VIGK G I++IR+++ A+IK+ + A ++ +I IS+K+
Sbjct: 97 AKGQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDN 156
Query: 317 FEDPSPTITAALRLQPRCSEKTERESGDPVI------------TTRILVPSAQIGCLIGR 364
E +T A + + + +E + T R+L+ +Q G LIG
Sbjct: 157 DE----KVTDAEKALEQIAHLILKEDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGM 212
Query: 365 GGAIISEMRSATRASIRILTNENVP--KVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
G I ++R ++ ASI +L +P A+E + +VQ++G + AL ++ +LR N
Sbjct: 213 SGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLREN 272
Query: 423 TFEREGAL------AAHPPVLPYV-PMSLD 445
+ ++ AA P PY+ P S+D
Sbjct: 273 PPRQVISISPTYNYAAIRPSQPYLDPTSVD 302
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 105/188 (55%), Gaps = 30/188 (15%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G ++R LCP K G +IGKGG I++Q R +T + IRI ++V GCDER++ I + +
Sbjct: 94 GAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADA 153
Query: 98 -------------------EGTNLFEDSGEFV-------SPAQDALFRVHDRIVAEDSLA 131
E NL S V SPAQ AL RV +RI+ D
Sbjct: 154 VKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEER 213
Query: 132 DDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+++ + L + R+L P++Q+GCV+G+GG++++ IR E+ AQIR+L +H+P CA
Sbjct: 214 EEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACAS 273
Query: 188 SFDELLQV 195
DEL+QV
Sbjct: 274 PGDELIQV 281
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 42/191 (21%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----- 311
A+ + R++CPA GGVIGKGG II+Q R+++GA I++D S D+ +I I
Sbjct: 95 AAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAV 154
Query: 312 -STKEFF----------------------------EDPSPTITAALRLQPRCSE------ 336
S +E ++ SP A +R+ R +
Sbjct: 155 KSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEERE 214
Query: 337 --KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYE 394
+ + + G+ + R+L PS Q+GC++GRGG I+ ++R + A IR+L +++P A
Sbjct: 215 EKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASP 274
Query: 395 DEEMVQITGSL 405
+E++Q+ L
Sbjct: 275 GDELIQVVHKL 285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE--LLQVAGE 198
+ R+L PA + G VIGKGG +I+ R +T A+IRI D+ + L DE +L VA
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSV----LGCDERVILIVADA 153
Query: 199 PAVVRKALVQIASRLHE------------NP--------SRSQHLLLSSSSNIYQSSGVY 238
R+A + ++ NP S +Q L+ I +
Sbjct: 154 VKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEER 213
Query: 239 LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
GN + RL+ P+ +G V+G+GG I+++IRQESGA I+V
Sbjct: 214 EEKEKKEDLGNVA----------VCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV 262
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 198/442 (44%), Gaps = 74/442 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS---E 98
++T R +C IG IIG G +V +LR ET + I V G D +V I S+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNK 82
Query: 99 GTNLFEDSGEF------------VSPAQDALFRVHDR----IVAED--SLADDEFGELTL 140
L + G+F VS AQ AL RV +R + A+D + D E E
Sbjct: 83 SVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEA-- 140
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+L +QIG V+G GG+ ++ +R + A IR+L P+C + DEL+Q+ G+
Sbjct: 141 -YCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVL 196
Query: 201 VVRKALVQIASRLHENP---------------------SRSQHL-----LLSSSSNIYQS 234
V+KALV +++ + +NP S H L SS N S
Sbjct: 197 AVKKALVMVSTCIQDNPPVNGYPQPLCIKAYESSTDGNSEDPHSEFFPNLRSSVPNASDS 256
Query: 235 SGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGAS 294
+ P V GN + R+ +++ + GG+IGK G II+ ++ E+GAS
Sbjct: 257 ASSNRHLPAVYDEGN-------GTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGAS 309
Query: 295 IKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG-------DPVI 347
I + + + ++ IS +E E AL L S + + E G V+
Sbjct: 310 ISIGAPLKVSGERVVTISARENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVV 369
Query: 348 TTRILVPSAQIGCLIGRGG--AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
T++LVPS L+G G AII AT A + I + + + E+E +++I G
Sbjct: 370 KTKLLVPSQFANSLVGNGNREAII-----ATGADVHIPVDNQILEWISENEVVIEIKGEY 424
Query: 406 DVASSALSQVTLRLRANTFERE 427
AL+ V+ +LR N ++
Sbjct: 425 GHVQKALTHVSSKLRENLLPKK 446
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 94/228 (41%), Gaps = 45/228 (19%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE-- 318
E ++R+VC A IGG+IG G ++ ++R+E+G I +S D ++FI
Sbjct: 24 ETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNKS 83
Query: 319 ---------------------DPSPTITAALRLQPRCSEKTERESGDPVITTR------- 350
D S TA +R+ R + G V+
Sbjct: 84 VLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAYCG 143
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
IL QIG ++G GG + MR ++ A IR+L P +E++QITG +
Sbjct: 144 ILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVLAVKK 200
Query: 411 ALSQVTLRLRANTFEREGALAAHPPVLPY-VPMSLDITDGSKYGNRDN 457
AL V+ ++ N PPV Y P+ + + S GN ++
Sbjct: 201 ALVMVSTCIQDN-----------PPVNGYPQPLCIKAYESSTDGNSED 237
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 29/230 (12%)
Query: 18 DAATNGGSKRRNPGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
+A+ + S R P E G G+E V++ + G IIGK G I++ L++ET ++
Sbjct: 252 NASDSASSNRHLPAVYDE--GNGTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGAS 309
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG 136
I I + ER+VTI + E+ S AQ+AL V R V D G
Sbjct: 310 ISIGAPLKVSGERVVTISAR-------ENLESRYSHAQNALALVFARSVEIDVEKGLRPG 362
Query: 137 --ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP-----LCALSF 189
++ ++LVP+ ++G G + A I D H+P L +S
Sbjct: 363 LHNGAVVKTKLLVPSQFANSLVGNGNR---------EAIIATGADVHIPVDNQILEWISE 413
Query: 190 DE-LLQVAGEPAVVRKALVQIASRLHEN--PSRSQHLLLSSSSNIYQSSG 236
+E ++++ GE V+KAL ++S+L EN P + + + SN Y+S+G
Sbjct: 414 NEVVIEIKGEYGHVQKALTHVSSKLRENLLPKKVLGEMRARVSNPYESAG 463
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 142/264 (53%), Gaps = 29/264 (10%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
++D ++R + P R+IG +IGK G ++++R ETK+ I+I++ + +ER++ I S
Sbjct: 68 AQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISS----- 122
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE-----FGELTLITVRMLVPADQIGCV 155
++S VS A++AL ++ I+ ED + G L T+R+L+ Q G +
Sbjct: 123 ---KESDCVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSL 179
Query: 156 IGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQIASRL 213
IG GQ I+ +R + A I +L LPLCA + D ++Q++G+ VV KA+ +I +L
Sbjct: 180 IGVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQL 239
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
ENP + + S S Y + V + P V D SA +L ++ +
Sbjct: 240 RENPPKQ----VISISPTYNYATVRPTQPYV----------DPTSADYVTLEMMVSETLV 285
Query: 274 GGVIGKGGGIIKQIRQESGASIKV 297
GG+IG+ G I +IR ESGA IKV
Sbjct: 286 GGLIGRCGSNISRIRNESGAMIKV 309
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE- 315
A A++ R+V P+ IG VIGK G I++IR+E+ A+IK+ + A ++ +I IS+KE
Sbjct: 66 AKAQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKES 125
Query: 316 --FFEDPSPTI--TAALRLQ----PRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGA 367
D + A L L+ P S K T R+L+ +Q G LIG G
Sbjct: 126 DCVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQ 185
Query: 368 IISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I ++R+++ A+I +L +P A+E + +VQI+G + V A+ ++ +LR N +
Sbjct: 186 NIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRENPPK 245
Query: 426 REGAL------AAHPPVLPYV-PMSLD 445
+ ++ A P PYV P S D
Sbjct: 246 QVISISPTYNYATVRPTQPYVDPTSAD 272
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/270 (34%), Positives = 138/270 (51%), Gaps = 35/270 (12%)
Query: 189 FDELLQVAGEPAVVRKALVQIASRLHENPSRS--------------QHLLLSSSSNIYQS 234
+ +LQ+ G+ V+KALV ++ RL + P+ Q L +++Q
Sbjct: 120 WVNVLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQ 179
Query: 235 SGVYL-------------SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
G L S PL + S + S +E +++C +GGVIGKGG
Sbjct: 180 RGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGG 239
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEK-TE 339
I+K ++ E+GASI V + AE D+ +I I+ E E SP + + R E E
Sbjct: 240 TIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIE 299
Query: 340 R-----ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYE 394
+ G PV + R++VPS Q+GCL+G+GG IISEMR A+ A IRI+ ++ VPK A E
Sbjct: 300 KGLDSGSKGSPV-SARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASE 358
Query: 395 DEEMVQITGSLDVASSALSQVTLRLRANTF 424
++++VQI+G L +T RLR N F
Sbjct: 359 NDQVVQISGEFVNVQDGLYHITGRLRDNLF 388
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +++ LC ++G +IGKGG IVK L++E ++I + V CDER++TI +S
Sbjct: 218 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITAS----- 272
Query: 102 LFEDSGEFVSPAQDALFRVHDR-IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E+ SPAQ+ + V +R I A D + + ++ R++VP++Q+GC++GKGG
Sbjct: 273 --ENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 330
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--PS 218
+I +R + A IRI+ + +P CA D+++Q++GE V+ L I RL +N PS
Sbjct: 331 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 390
Query: 219 RS 220
++
Sbjct: 391 KT 392
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 115/191 (60%), Gaps = 16/191 (8%)
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---- 297
PL+ Y N + EFS+R++C + IG VIG+ G ++Q+ Q++GA I V
Sbjct: 47 PLLDPYRNRPLQYPVPEPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELH 106
Query: 298 -DSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCS-----EKTERE-SGDPVITT 349
D+SG + +I IS+KE DP SPTI A + L + S E +E E SG+ + T
Sbjct: 107 KDASG----ERLIVISSKEIPADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVT 162
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R++VPS ++GC++G GG +I+EMR A IR+ + + PK +EE+VQ++GS D+A
Sbjct: 163 RLVVPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAR 222
Query: 410 SALSQVTLRLR 420
AL+++ RLR
Sbjct: 223 EALTEIASRLR 233
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 102/180 (56%), Gaps = 16/180 (8%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGT 100
E+ R LC IG +IG+ G V+Q+ +T + I + E ER++ I S
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSK---- 120
Query: 101 NLFEDSGEFVSPAQDALFRVHDRI----VAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E + VSP +AL +H ++ V+E S ++ GE L+T R++VP+ ++GC++
Sbjct: 121 ---EIPADPVSPTIEALILLHSKVSASKVSEPSESEPS-GEHKLVT-RLVVPSKKVGCIL 175
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSF-DELLQVAGEPAVVRKALVQIASRLHE 215
G+GG+VI +R A+IR+ P LSF +EL+QV+G P + R+AL +IASRL +
Sbjct: 176 GEGGKVITEMRRRIGAEIRVYSKADKPKY-LSFNEELVQVSGSPDIAREALTEIASRLRD 234
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 104/178 (58%), Gaps = 8/178 (4%)
Query: 249 NYSARRDEASAR-----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
NYS+ R E R++C +G +IGKGG I+ ++ E+GASIK+ ++
Sbjct: 8 NYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSD 67
Query: 304 GDDCIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
++ +I IS E E SP A LR+ R SE + +S +T R+LVPS IGCL+
Sbjct: 68 SEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSS--AVTARLLVPSQHIGCLL 125
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GG+II+EMR T A IRI NE +P+ A ++E+VQ+TGS AL +T R+R
Sbjct: 126 GKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 183
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 17/196 (8%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
A N S PG R ++ V+R +C +GSIIGKGG ++ L+SET ++I+I
Sbjct: 6 ARNYSSNMAAPGP----RFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKI 61
Query: 80 SETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT 139
E +ER++ I + E+S SPAQDA+ RVH RI ++ + +
Sbjct: 62 IEPNSDSEERVIVISA-------HENSEMMHSPAQDAVLRVHSRI------SESSMDKSS 108
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
+T R+LVP+ IGC++GKGG +I +R T A IRI +E +P CA DEL+QV G
Sbjct: 109 AVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSF 168
Query: 200 AVVRKALVQIASRLHE 215
++ AL+ I R+ +
Sbjct: 169 QSIQDALLHITGRIRD 184
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 16/233 (6%)
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV-------YLSAPLVGSYG-NYSAR 253
+RKAL+ + + L +NP G+ YL + + NYS+
Sbjct: 164 LRKALLLVTTCLQDNPRPDASNFPPGRFGPPGPVGIDPHSQRGYLPPSMPDYHARNYSSN 223
Query: 254 RDEASAR-----EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
R E R++C +G +IGKGG I+ ++ E+GASIK+ ++ ++ +
Sbjct: 224 MAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERV 283
Query: 309 IFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGA 367
I IS E E SP A LR+ R SE + +S +T R+LVPS IGCL+G+GG+
Sbjct: 284 IVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSS--AVTARLLVPSQHIGCLLGKGGS 341
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
II+EMR T A IRI NE +P+ A ++E+VQ+TGS AL +T R+R
Sbjct: 342 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 394
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 103/174 (59%), Gaps = 13/174 (7%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ V+R +C +GSIIGKGG ++ L+SET ++I+I E +ER++ I +
Sbjct: 235 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISA------ 288
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
E+S SPAQDA+ RVH RI ++ + + +T R+LVP+ IGC++GKGG
Sbjct: 289 -HENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 341
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+I +R T A IRI +E +P CA DEL+QV G ++ AL+ I R+ +
Sbjct: 342 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 395
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 139/275 (50%), Gaps = 41/275 (14%)
Query: 191 ELLQVAGEPAVVRKALVQIASRLHENP-----------------SRSQHLLLSSSSNIYQ 233
EL Q+ G+ V+KAL+ ++ RL + P S + + L S +N++
Sbjct: 8 ELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLESLTNLHI 67
Query: 234 SSGVYLSAPLVG----SYGN-------------YSARRDEASAREFSLRLVCPAGNIGGV 276
+ S+ L S GN SA +A +E + R++C +G V
Sbjct: 68 DHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRVSALDPKAYQQEVTFRIICSNDRVGAV 127
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSE 336
IGKGG I++ ++ ESGA I V S E +D ++ I+ E E A+ L S
Sbjct: 128 IGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVLVFSKSV 187
Query: 337 KTERESG-------DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP 389
+ E G +P +T R++VPS Q+GCL+G+GGAI+SEMR AT A+IR++ N+ VP
Sbjct: 188 EAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQVP 247
Query: 390 KVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
+++++VQI+G +A+ T RLR + F
Sbjct: 248 MCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF 282
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 147/310 (47%), Gaps = 48/310 (15%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +R +C ++G++IGKGG IV+ L++E+ + I + ++ C++R+VTI +S
Sbjct: 111 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITAS----- 165
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG--ELTLITVRMLVPADQIGCVIGKG 159
E+ SPAQ A+ V + V E G + +T R++VP++Q+GC++GKG
Sbjct: 166 --ENPESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKG 223
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G ++ +R T A IR++ ++ +P+C D+L+Q++G + V+ A+ RL ++
Sbjct: 224 GAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFV 283
Query: 220 SQH------------------LLLSSSSNIYQSSGVYLSAPL----VGSYGNYSARR--- 254
S L +S S N + G L AP + S G R
Sbjct: 284 STQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPG--LQAPQTVAGINSRGTNGVSRGLI 341
Query: 255 ------------DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA 302
A ++++V P IG V G+ G + ++RQ SGA + V
Sbjct: 342 SRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQISGAKVIVHEPRP 401
Query: 303 EGDDCIIFIS 312
D I IS
Sbjct: 402 GTSDRTIIIS 411
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 152/304 (50%), Gaps = 44/304 (14%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-GCDERIVT 92
+++ +E +R LCP + G+IIGKGG +++ L+S T S IR+ + +P +ER+V
Sbjct: 232 SKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVL 291
Query: 93 IYSSS----EGTNLFE-----------------------DSGEFVSPAQDALFRVHDRIV 125
I + S + +N+F+ D E S AQ AL RV +RIV
Sbjct: 292 IIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIV 351
Query: 126 AEDSLADDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D A + L + RM+V +Q+ ++ KGG++IQ IR ++ A +RI +
Sbjct: 352 FGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQ 411
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN---PSRSQHLLLSS------SSNIY 232
+P CA D ++Q+ G+ + V+KAL+ I + L E+ P+ + S Y
Sbjct: 412 IPPCAFPGDVVIQITGKFSSVKKALLLITNCLQESGAPPTWDECPFPQPGYPPDYHSMEY 471
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
+ P+ ++ E E S RL+CPA +G +IGKGG +++ ++ ESG
Sbjct: 472 HPQWDHPPNPMPEDVVPFNRPVVE---EEVSFRLLCPADKVGSLIGKGGAVVRALQNESG 528
Query: 293 ASIK 296
ASIK
Sbjct: 529 ASIK 532
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 96/241 (39%), Gaps = 63/241 (26%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV------------- 297
S++R +A RL+CPA G +IGKGG +I+ ++ +G+ I+V
Sbjct: 231 SSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVV 290
Query: 298 ---DSSGAEGDDCIIFISTKEFFEDP--------------------SPTITAALRLQPRC 334
SG + DD +F S E+P S A LR+ R
Sbjct: 291 LIIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERI 350
Query: 335 S-------------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
+K E ES R++V Q+ L+ +GG +I +R + A +R
Sbjct: 351 VFGDDAASVDGDGLDKGESES-----LCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVR 405
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVP 441
I + + +P A+ + ++QITG AL +T N + GA PP P
Sbjct: 406 ISSTDQIPPCAFPGDVVIQITGKFSSVKKALLLIT-----NCLQESGA----PPTWDECP 456
Query: 442 M 442
Sbjct: 457 F 457
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 426 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 482
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + T+ C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 483 AFINVGNTLDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 535
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 536 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 593
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ GE VR+A+ I SRL ++
Sbjct: 594 VQITGEFPNVREAIFHITSRLRDS 617
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNTLDDCEERLIAVT 502
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 562
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQITG A+ +T RLR + F
Sbjct: 563 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQS 511
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 512 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 537
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 538 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 577
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 426 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 482
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + T+ C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 483 AFINVGNTLDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 535
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 536 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 593
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ GE VR+A+ I SRL ++
Sbjct: 594 VQITGEFPNVREAIFHITSRLRDS 617
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNTLDDCEERLIAVT 502
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 562
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQITG A+ +T RLR + F
Sbjct: 563 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQS 511
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 512 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 537
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 538 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 577
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 20/207 (9%)
Query: 15 FQSDAATNGGSKRRN--PGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRS 71
+Q + A NG K+++ + ++R G D+V+R L P+ K+G+IIG+ GE +K++
Sbjct: 82 YQEENAFNGEVKQQDNLQVEANDKRWPGWPGDSVFRILVPVHKVGAIIGRKGEFIKRMCE 141
Query: 72 ETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLA 131
E+K+ I+I + PG ER V I + E E +SPA D L R+H RI +
Sbjct: 142 ESKARIKILDGPPGVPERAVMISAKDE-------PDEQISPAMDGLLRIHKRIA---DGS 191
Query: 132 DDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
D EFG+ T+ R+LVPA Q G +IGK G I++I+ ++A +RI+ E++P A
Sbjct: 192 DGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV--ENVPPVA 249
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRL 213
L+ D ++++ GEP V+KA+ IAS L
Sbjct: 250 LNDDRVVEIQGEPLSVQKAVELIASHL 276
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSP 322
R++ P +G +IG+ G IK++ +ES A IK+ D + ++ + E E SP
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 323 TITAALRLQPRCSE-------KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ LR+ R ++ +T+R +G + TR+LVP++Q G LIG+ GA I ++ +
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGT-MGPTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
++A +RI+ ENVP VA D+ +V+I G A+ + LR
Sbjct: 235 SKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLR 277
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 426 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 482
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + T+ C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 483 AFINVGNTLDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 535
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 536 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 593
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ GE VR+A+ I SRL ++
Sbjct: 594 VQITGEFPNVREAIFHITSRLRDS 617
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNTLDDCEERLIAVT 502
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 562
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQITG A+ +T RLR + F
Sbjct: 563 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQS 511
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 512 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 537
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 538 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 577
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 116/204 (56%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 426 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 482
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + T+ C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 483 AFINVGNTLDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 535
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 536 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 593
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ GE VR+A+ I SRL ++
Sbjct: 594 VQITGEFPNVREAIFHITSRLRDS 617
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNTLDDCEERLIAVT 502
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 562
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQITG A+ +T RLR + F
Sbjct: 563 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 452 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQS 511
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 512 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 537
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 538 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 577
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/145 (49%), Positives = 96/145 (66%), Gaps = 15/145 (10%)
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
+DALFRVHD++V+E ++D F E + +TV++LV +DQIGCVIGKGGQ+IQNI +E+ AQ
Sbjct: 56 EDALFRVHDKVVSEKVHSED-FEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQ 114
Query: 174 IRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQ 233
I ILK++HL CALSFDEL+Q++GE R L ++ +LH QHLL S Y
Sbjct: 115 IYILKNDHLLSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYS 170
Query: 234 SSGVYLS----------APLVGSYG 248
S G + APLVG+YG
Sbjct: 171 SGGSLIGPTSGAPIMGLAPLVGTYG 195
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 304 GDDCIIFI---STKEFFEDPSPTITAALRLQPRC-SEKTERESGDPV--ITTRILVPSAQ 357
G D ++I + KE ED A R+ + SEK E + +T ++LV S Q
Sbjct: 39 GPDDTVYIDLYALKERLED------ALFRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQ 92
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
IGC+IG+GG II + S + A I IL N+++ A +E+VQI+G
Sbjct: 93 IGCVIGKGGQIIQNIYSESGAQIYILKNDHLLSCALSFDELVQISG 138
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 40/118 (33%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLR------- 53
MAG+ N +Y K+ QSD NGG+KR NPGD+ IG +DTVY L L+
Sbjct: 1 MAGKRN-SYEKQAQSQSDYGDNGGNKRINPGDDRNPFTIGPDDTVYIDLYALKERLEDAL 59
Query: 54 --------------------------------KIGSIIGKGGEIVKQLRSETKSNIRI 79
+IG +IGKGG+I++ + SE+ + I I
Sbjct: 60 FRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYI 117
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 145/268 (54%), Gaps = 36/268 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D ++R + P KIG +IGK G ++++R +TK+ I+I++ V +ER++ I SS E N
Sbjct: 50 DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIII-SSKENENG 108
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADD-----EFGELT------LITVRMLVPADQ 151
D A++AL R+ + I+ ED E G+L T+R+L+ Q
Sbjct: 109 ATD-------AENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQ 161
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
G +IG GQ I +R + A I +L LPLCA ++ D ++Q++G+ VV KAL +I
Sbjct: 162 AGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEI 221
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
+L ENP + Q + +S S N Y + P + Y+ +A+A ++ ++ P
Sbjct: 222 GCQLRENPPK-QVISISPSYN-------YSAVP----FQQYA---PQAAADYVTMEMMVP 266
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV 297
+GG+IG+ G I +IR ESGA IKV
Sbjct: 267 ETMMGGLIGRSGSNISRIRVESGAVIKV 294
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 18/192 (9%)
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
G SA + +A A + R+V P+G IG VIGK G I++IR+++ A+IK+ + A ++
Sbjct: 38 GETSAAKRQARA-DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEER 96
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTER--------ESGDPV-------ITTRIL 352
+I IS+KE + A R+ + + E G V T R+L
Sbjct: 97 VIIISSKENENGATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLL 156
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASS 410
+ +Q G LIG G I ++R+++ A I +L +P AYE + +VQI+G + V
Sbjct: 157 IAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLK 216
Query: 411 ALSQVTLRLRAN 422
AL ++ +LR N
Sbjct: 217 ALEEIGCQLREN 228
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 105/174 (60%), Gaps = 10/174 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P++K+G IIG+ GE VK++ ET+S I+I E VPG ERIV + +
Sbjct: 12 DNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAR------ 65
Query: 103 FEDSGEFVSPAQDALFRVHDRIV--AEDSLADDEFGEL-TLITVRMLVPADQIGCVIGKG 159
ED +SPA + L RVH R++ AE D E ++ R+LV A Q G +IG+
Sbjct: 66 -EDPEAAISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQ 124
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G I++I+ + A +R+L E LPLCAL+ D +++V G+P V++A+ + S L
Sbjct: 125 GATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHL 178
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 88/174 (50%), Gaps = 14/174 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RLV P +GG+IG+ G +K++ +E+ + IK+ + I+ +S +E DP
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSARE---DPEAA 71
Query: 321 -SPTITAALRLQPRCSEKTERESGDPVI-------TTRILVPSAQIGCLIGRGGAIISEM 372
SP + LR+ R E E ES D I ++R+LV + Q G LIGR GA I +
Sbjct: 72 ISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSI 131
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ + A++R+L E +P A D+ +V++ G A+ V LR +R
Sbjct: 132 QDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDR 185
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 137/298 (45%), Gaps = 51/298 (17%)
Query: 10 GKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
GKR Q D ++ ++ ++RG E YR LCP IGS+IGK G+++ +
Sbjct: 5 GKRNRLQRDHHDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSI 64
Query: 70 RSETKSNIRISETVPGCDERIVTIY---SSSEGTNL---FEDSGEFVSPAQDALFRVHDR 123
R ET++ +++ + PG ++R++TIY E L F D F + AQDAL RVH
Sbjct: 65 RQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCA-AQDALLRVHSA 123
Query: 124 IV-AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-KDEH 181
I A S+ D + R+LVP+ Q +IGK G I+ +R++TRA I++ KD
Sbjct: 124 ISNAVSSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDAS 183
Query: 182 LPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYL 239
P CA+ FD + P ++ V+ LLL N V
Sbjct: 184 DPTHSCAMDFDNFIM---SPDDLKSMAVEAI------------LLLQGKINDEDDDTV-- 226
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S+RL+ P IG +IGK G II +IR+ + A I++
Sbjct: 227 -----------------------SIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRI 261
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 150/310 (48%), Gaps = 36/310 (11%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
L+ R+L P + IG VIGK G+VI +IR ETRA+++++ P D ++ +
Sbjct: 38 LVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGP-----NDRVITIYC-- 90
Query: 200 AVVRKALVQIASRLHENP--SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
V +K V++ H++ +Q LL S I + L + D
Sbjct: 91 YVKKKEDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDS-------------DRK 137
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFF 317
+ R++ P+ +IGK G IK++R ++ A+IKV A + F
Sbjct: 138 MKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDASDPTHSCAMDFDNFI 197
Query: 318 EDP----SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
P S + A L LQ + +++ D ++ R+LVP IGC+IG+ G+II+E+R
Sbjct: 198 MSPDDLKSMAVEAILLLQGKINDED-----DDTVSIRLLVPCKVIGCIIGKSGSIINEIR 252
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF-EREGALAA 432
T+A IRI + PK A +E+V++ G + AL Q+ LRLR + E++G +
Sbjct: 253 RRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDG---S 308
Query: 433 HPPVLPYVPM 442
H P + P+
Sbjct: 309 HNPSVGADPL 318
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 143/306 (46%), Gaps = 61/306 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L P + +IIGK G +K+LRS+T++ I+++ D T + + N
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPK----DASDPTHSCAMDFDNFIMSP 200
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ S A +A+ + +I ED DD +++R+LVP IGC+IGK G +I I
Sbjct: 201 DDLKSMAVEAILLLQGKINDED---DDT------VSIRLLVPCKVIGCIIGKSGSIINEI 251
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE----------N 216
R T+A IRI K + P CA S DEL++V GE VR ALVQI RL + N
Sbjct: 252 RRRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDGSHN 310
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPL----------------------VGSYGN----- 249
PS L S S I S + P+ + YG+
Sbjct: 311 PSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSGLGLLSSSNLYGYGSLTMGD 370
Query: 250 --YSARRDEASAREF-------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DS 299
Y + +S++ + +L ++ PA +G V+GKGG I IR+ SGA I++ D+
Sbjct: 371 NGYDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIANIRKISGAMIEISDA 430
Query: 300 SGAEGD 305
A GD
Sbjct: 431 KSARGD 436
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
R ++K ER + D ++ RIL P IG +IG+ G +I+ +R TRA ++++
Sbjct: 25 RVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV 75
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 136/267 (50%), Gaps = 35/267 (13%)
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRS--------------QHLLLSSSSNIYQSSGV 237
++ + G+ V+KALV ++ RL + P+ Q L +++Q G
Sbjct: 139 MIIIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGS 198
Query: 238 YL-------------SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
L S PL + S + S +E +++C +GGVIGKGG I+
Sbjct: 199 VLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQEVIFKILCSNDRVGGVIGKGGTIV 258
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEK-TER-- 340
K ++ E+GASI V + AE D+ +I I+ E E SP + + R E E+
Sbjct: 259 KALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGL 318
Query: 341 ---ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
G PV + R++VPS Q+GCL+G+GG IISEMR A+ A IRI+ ++ VPK A E+++
Sbjct: 319 DSGSKGSPV-SARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQ 377
Query: 398 MVQITGSLDVASSALSQVTLRLRANTF 424
+VQI+G L +T RLR N F
Sbjct: 378 VVQISGEFVNVQDGLYHITGRLRDNLF 404
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 109/182 (59%), Gaps = 10/182 (5%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +++ LC ++G +IGKGG IVK L++E ++I + V CDER++TI +S
Sbjct: 234 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITAS----- 288
Query: 102 LFEDSGEFVSPAQDALFRVHDR-IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E+ SPAQ+ + V +R I A D + + ++ R++VP++Q+GC++GKGG
Sbjct: 289 --ENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 346
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--PS 218
+I +R + A IRI+ + +P CA D+++Q++GE V+ L I RL +N PS
Sbjct: 347 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 406
Query: 219 RS 220
++
Sbjct: 407 KT 408
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 196/435 (45%), Gaps = 60/435 (13%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS---E 98
++T R +C IG IIG G +V +LR ET + I V G D +V I S+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 99 GTNLFEDSGEF------------VSPAQDALFRVHDR----IVAED--SLADDEFGELTL 140
L + GEF VS AQ AL RV +R + A+D + D E E
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEE--- 139
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+L +QIG V+G GG+ ++ +R + A IR+L P+C DEL+Q+ G+
Sbjct: 140 AYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVL 196
Query: 201 VVRKALVQIASRLHENP---------SRSQHLLLSSSSNI----------YQSSGVYLSA 241
V+KALV ++S + N S + LS+ N +SS + +
Sbjct: 197 AVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSLSNAT 256
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+V S + ++ R+ +++ + GG+IGK G II+ ++ E+GASI V +
Sbjct: 257 EIVASNRHLPYDGGNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPL 316
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG-------DPVITTRILVP 354
+ ++ +S +E E AL L S + + E G ++ T++LVP
Sbjct: 317 KVSGERVVTVSARENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVP 376
Query: 355 SAQIGCLIGRGG--AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
S G G AII AT A + I V + E+E +++I G AL
Sbjct: 377 SHFANSFNGNGNREAII-----ATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKAL 431
Query: 413 SQVTLRLRANTFERE 427
+ V+ +LR N ++
Sbjct: 432 THVSSKLRENLLPKK 446
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
S+ +A +E + R++C +GGVIGKGG I++ ++ E+GA+I + + AE +D +I
Sbjct: 308 SSLEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLIT 367
Query: 311 ISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIG 363
I+ E E SP AA+ + R E + D ++T R++VPS+Q+GCLIG
Sbjct: 368 IAASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIG 427
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
+GG I+SEMR AT A+IRI+ + VPK A +++++VQI+G AL RLR N
Sbjct: 428 KGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNL 487
Query: 424 F 424
F
Sbjct: 488 F 488
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 105/178 (58%), Gaps = 11/178 (6%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ +R LC ++G +IGKGG IV+ L+SET + I I V C++R++TI +S
Sbjct: 317 QEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAAS----- 371
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVA---EDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
E+ SPAQ A V R + E L D + +++TVR++VP+ Q+GC+IGK
Sbjct: 372 --ENPESRYSPAQKAAVLVFSRSIEVGFEKGL-DSGLNKGSIVTVRLVVPSSQVGCLIGK 428
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GG ++ +R T A IRI+ + +P CA D+++Q++GE + V+ AL RL +N
Sbjct: 429 GGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDN 486
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 111/200 (55%), Gaps = 10/200 (5%)
Query: 22 NGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE 81
NG SKR + +R LC +IG +IGK G ++K L+ T + IRI +
Sbjct: 23 NGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIED 82
Query: 82 TVPGCDERIVTIYSSS--EGTNLFEDSGEF-VSPAQDALFRVHDRIVAE---DSLADDEF 135
+RI+ + + + G L + VS AQ+AL +V DRI+ D D
Sbjct: 83 APQELPDRIILVIADAALSGKILLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVD--V 140
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
G+ +++ R++ A Q G VIGKGG+V++ I+ ET +IR+L D+ LPLCA + DE++++
Sbjct: 141 GD-RVMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEIIEI 198
Query: 196 AGEPAVVRKALVQIASRLHE 215
G + V+KALV ++ RL +
Sbjct: 199 EGRVSSVKKALVAVSQRLQD 218
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 17/190 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST------- 313
+ RL+C A IGGVIGK G +IK ++Q +GA I+++ + E D II +
Sbjct: 44 HVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGK 103
Query: 314 ----KEFFEDPSPTITAALRLQPRC--SEKTER--ESGDPVITTRILVPSAQIGCLIGRG 365
E + S A L++ R S +R + GD V++ R++ +AQ G +IG+G
Sbjct: 104 ILLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDRVMSCRLVADAAQAGSVIGKG 163
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR-ANTF 424
G ++ ++ T IR+LT +++P A +E+++I G + AL V+ RL+ +
Sbjct: 164 GKVVERIKKETGCKIRVLT-DDLPLCASASDEIIEIEGRVSSVKKALVAVSQRLQDCHPV 222
Query: 425 EREGALAAHP 434
+R + + P
Sbjct: 223 DRTKMMGSKP 232
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK-DEHLPLCALSFDELLQVAGEP 199
+ R+L A +IG VIGK G VI+ ++ T A+IRI + LP D ++ V +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELP------DRIILVIADA 98
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
A+ K L++ + S++Q LL I +S G G+ S +
Sbjct: 99 ALSGKILLRNEEVIEV--SKAQEALLKVFDRILRSGG-----------GDRSV---DVGD 142
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R S RLV A G VIGKGG ++++I++E+G I+V
Sbjct: 143 RVMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRV 180
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 196/435 (45%), Gaps = 60/435 (13%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS---E 98
++T R +C IG IIG G +V +LR ET + I V G D +V I S+ +
Sbjct: 23 DETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVNQ 82
Query: 99 GTNLFEDSGEF------------VSPAQDALFRVHDR----IVAED--SLADDEFGELTL 140
L + GEF VS AQ AL RV +R + A+D + D E E
Sbjct: 83 SILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEE--- 139
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+L +QIG V+G GG+ ++ +R + A IR+L P+C DEL+Q+ G+
Sbjct: 140 AYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVL 196
Query: 201 VVRKALVQIASRLHENP---------SRSQHLLLSSSSNI----------YQSSGVYLSA 241
V+KALV ++S + N S + LS+ N +SS + +
Sbjct: 197 AVKKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSLSNAT 256
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+V S + ++ R+ +++ + GG+IGK G II+ ++ E+GASI V +
Sbjct: 257 EIVASNRHLPYDGGNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPL 316
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG-------DPVITTRILVP 354
+ ++ +S +E E AL L S + + E G ++ T++LVP
Sbjct: 317 KVSGERVVTVSARENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVP 376
Query: 355 SAQIGCLIGRGG--AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
S G G AII AT A + I V + E+E +++I G AL
Sbjct: 377 SHFANSFNGNGNREAII-----ATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKAL 431
Query: 413 SQVTLRLRANTFERE 427
+ V+ +LR N ++
Sbjct: 432 THVSSKLRENLLPKK 446
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 164/315 (52%), Gaps = 27/315 (8%)
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
+ T++ +IR+ KD+ LPLCAL DEL Q+ GE VRK L +A L +P + +L
Sbjct: 1 MSTDSCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLG 59
Query: 226 S----SSSNIYQSSGVY-------LSAPLVGSYGNYSARRDEA--------SAREFSLRL 266
+ SS + + V L P G + EA + RL
Sbjct: 60 AHNSGSSRSFFNQPDVLPPGMQPNLHLPFQGPNVAHLPNFPEALMHGHGSVPPEPLTFRL 119
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTIT 325
+C + +GG+IGKGG IK I+ ++G IKV + + +D I+FIS D SP
Sbjct: 120 LCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQN 179
Query: 326 AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
A L +Q + + + G P I R++V Q+GCL+G+GG+II+EMR + A I +L+
Sbjct: 180 AILHVQRKIVPTSNTKEG-PAIC-RLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSK 237
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL- 444
+ +PK E++E+VQI+G+ + AL Q+T RLR + F R+ + P V P P L
Sbjct: 238 DKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-RDRMASTVPNVQP--PFGLV 294
Query: 445 DITDGSKYGNRDNQS 459
D GS GN D+ S
Sbjct: 295 DPQFGSYAGNHDSIS 309
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 118/224 (52%), Gaps = 20/224 (8%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+ E +R LC K+G IIGKGG +K ++++T I++ +TVP ++RIV I +
Sbjct: 110 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 169
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
G+ +SPAQ+A+ V +IV + + R++V +Q+GC++GK
Sbjct: 170 -------PGDGISPAQNAILHVQRKIVPTSNTKEGP------AICRLIVSPNQVGCLLGK 216
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG +I +R + A I +L + +P DE++Q++G +++AL+QI +RL +
Sbjct: 217 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 276
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
R + + S+ N+ G+ + +G+Y+ D S R F
Sbjct: 277 RDR--MASTVPNVQPPFGL-----VDPQFGSYAGNHDSISPRIF 313
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 99/181 (54%), Gaps = 21/181 (11%)
Query: 24 GSKRR-----NPGDETEQRGIGSED-----TVYRYLCPLRKIGSIIGKGGEIVKQLRSET 73
GSKRR P D Q IG+ + TVYR L +K+GS+IGK G IVK +R ET
Sbjct: 74 GSKRRYDDRDGPPDAKRQ-AIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDET 132
Query: 74 KSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
+ IR+ E VP CDER++ I + S D+ AQ+ALF+VH R+ + +
Sbjct: 133 GARIRVVEGVPNCDERVIVISARS-------DAARHTDAAQEALFKVHARVHEHE---EG 182
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
T RMLV Q GC+IGK G +I+ IR + A I+IL E LP C LS D ++
Sbjct: 183 PHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVV 242
Query: 194 Q 194
Q
Sbjct: 243 Q 243
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
E E RL+ + +G VIGK G I+K IR E+GA I+V D+ +I IS +
Sbjct: 97 EGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARS 156
Query: 316 FFEDPSPTITAAL-RLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMR 373
+ AL ++ R E E P TTR+LV Q GCLIG+ GAII E+R
Sbjct: 157 DAARHTDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIR 216
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQ 400
A+ A I+IL E++P ++ +VQ
Sbjct: 217 EASGAHIKILPAEDLPPCGLSNDRVVQ 243
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 120/213 (56%), Gaps = 11/213 (5%)
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
RS +L SSSN Y ++GV+ L S+ +A +E + +++C IGGVIG
Sbjct: 90 RSALSILPSSSNSY-ATGVH---SLSAEVNRVSSLEPKAHQQEITFKIICSNDRIGGVIG 145
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEK 337
KGG II+ ++ E+GA++ V S AE +D +I I+ E E SP A + + R E
Sbjct: 146 KGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESRYSPAQKATVLVFSRSVEA 205
Query: 338 TERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV 391
+ D +T +++V S Q+GCL+G+GG I+SEMR AT ASIRI+ + V K
Sbjct: 206 GIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKC 265
Query: 392 AYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
A +++++VQI+G AL T RLR N F
Sbjct: 266 ASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 298
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 101/177 (57%), Gaps = 9/177 (5%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
++ ++ +C +IG +IGKGG I++ L+SET + + + +V C++R++TI +S +
Sbjct: 127 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPES 186
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAE--DSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ SPAQ A V R V + D + +T +++V ++Q+GC++GKG
Sbjct: 187 RY-------SPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 239
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
G ++ +R T A IRI+ + + CA D+++Q++GE + V+ AL RL +N
Sbjct: 240 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 296
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 137/285 (48%), Gaps = 63/285 (22%)
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRS------------------QHLLLSSS 228
+SFD +Q+ G+ VRKAL +++ +++ PS+ L + S
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 229 SNIYQSSGVYLSA-----PLVGSYGNYSARRDEASAR----------------------- 260
SN Y S +S+ ++GS + A A
Sbjct: 61 SNFYSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPKCSG 120
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E LR++CPAG IG VIGKGG IK IR+ESGA I VD S + ++ II I++ E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 321 -SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
S + A L LQ + ++ E + IGCLIG+GG+I+++MRS T+A+
Sbjct: 181 KSAAVEAVLLLQSKINDDNEGK---------------VIGCLIGKGGSIVNDMRSKTKAA 225
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I I E P+ A +E+V++ G ++ AL Q+ LRLR +
Sbjct: 226 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVL 269
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 139/306 (45%), Gaps = 77/306 (25%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S + V R LCP KIG +IGKGG +K +R E+ + I + ++ +E I+TI +S+E T
Sbjct: 119 SGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITI-TSNEAT 177
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + S A +A+ + +I DD G++ IGC+IGKGG
Sbjct: 178 D------DAKSAAVEAVLLLQSKI------NDDNEGKV-------------IGCLIGKGG 212
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL------- 213
++ ++R++T+A I I K E P A S DEL++V GE +R ALVQI RL
Sbjct: 213 SIVNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRD 271
Query: 214 ---HENPSRSQHLLLSSSSNIYQSS----------------------------GVYLSAP 242
+N + L ++++ +Y SS VY +
Sbjct: 272 SVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSS 331
Query: 243 LVGSYGNYSARRDEASA-----------REFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
L G Y + A D SA R + + PA + V+GK G + I + S
Sbjct: 332 LYG-YSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDNIIKIS 390
Query: 292 GASIKV 297
GA I++
Sbjct: 391 GAHIEI 396
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
Query: 13 TH-FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRS 71
TH + A+ + + P E E +G++D V++ LC G +IG GG++V+ L S
Sbjct: 431 THSITTSASIANTASMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGSGGKVVRMLHS 487
Query: 72 ETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLA 131
ET + I + T+ C+ER++ + + E+ SPAQ A+ + R+ +
Sbjct: 488 ETGAFINVGNTLADCEERLIAVTAP-------ENPECQSSPAQKAIMLLFSRLFELSTKK 540
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+ G T IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D+
Sbjct: 541 ILDNGPRTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQ 600
Query: 192 LLQVAGEPAVVRKALVQIASRLHEN 216
++Q+ GE VR+A+ I SRL ++
Sbjct: 601 VIQITGEFPNVREAIFHITSRLRDS 625
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 102/174 (58%), Gaps = 5/174 (2%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
E ++ +++C N GGVIG GG +++ + E+GA I V ++ A+ ++ +I ++ E
Sbjct: 454 EVGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPE 513
Query: 316 FFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIIS 370
E SP A + L R E + ++ D IT R++VP++QIGC++G+GG I+S
Sbjct: 514 NPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVS 573
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
EMR T A+I+IL E PK E+++++QITG A+ +T RLR + F
Sbjct: 574 EMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVF 627
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 158
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE++++ G V+KALV I+
Sbjct: 159 AGAVIGKGGQMVGSIRKETGCKISI-RTENLPICADTDDEMVEIEGNAIAVKKALVSIS 216
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 31/212 (14%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ D +I I
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 165
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT-------- 416
GG ++ +R T I I T EN+P A D+EMV+I G+ AL ++
Sbjct: 166 GGQMVGSIRKETGCKISIRT-ENLPICADTDDEMVEIEGNAIAVKKALVSISRCLQNCQS 224
Query: 417 ---LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 IDKVRMVGNRPLEKEFQASLHRPIETIIQESL 256
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 460 VVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPENPECQS 519
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ + SRL E LS+ + D
Sbjct: 520 SPA--QKAIMLLFSRLFE---------LSTKKIL-----------------------DNG 545
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 546 PRTSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGATIQI 585
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 15/196 (7%)
Query: 18 DAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
+ AT GG ++R PG E TV+R L P +K+GSIIG+ G+++K++ ET++ I
Sbjct: 160 EGATVGGEEKRWPGWPGE--------TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARI 211
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
+I + PG ER V + E + + P+ D L RVH RIV +
Sbjct: 212 KILDGPPGTTERAVMVSGKEEPES-------SLPPSMDGLLRVHMRIVDGLDGEPSQAPP 264
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAG 197
+ ++ R+LVPA Q G +IGK G ++ I+ + +R+L E LP+ AL D +++V G
Sbjct: 265 ASKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVG 324
Query: 198 EPAVVRKALVQIASRL 213
EP V KAL IAS L
Sbjct: 325 EPTSVHKALELIASHL 340
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G +IK+I +E+ A IK+ + + +S KE E
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 321 -SPTITAALRLQPRCSEKTERE--SGDPV--ITTRILVPSAQIGCLIGRGGAIISEMRSA 375
P++ LR+ R + + E P ++TR+LVP++Q G LIG+ G + ++ A
Sbjct: 237 LPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 296
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ +R+L +E++P A +D+ +V++ G AL + LR +R
Sbjct: 297 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDR 347
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 438 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 494
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + + C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 495 AFINVGNALDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 547
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 548 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 605
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ E VR+A+ I SRL ++
Sbjct: 606 VQITEEFPNVREAIFHITSRLRDS 629
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNALDDCEERLIAVT 514
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 574
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQIT A+ +T RLR + F
Sbjct: 575 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQS 523
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 524 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 549
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 550 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 589
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 114/204 (55%), Gaps = 14/204 (6%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F + A+ + + P E E +G++D V++ LC G +IG GG++V+ L SET
Sbjct: 438 FTTSASMANTATMKPPPSEVE---VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETG 494
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLAD 132
+ I + + C+ER++ + +S E+ SPAQ A+ + R+ +A + + D
Sbjct: 495 AFINVGNALDDCEERLIAVTAS-------ENPECQSSPAQKAIMLIFSRLFELATNKILD 547
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G + IT R++VP QIGCV+GKGG ++ +R T A I+ILK E P C D++
Sbjct: 548 N--GPRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQV 605
Query: 193 LQVAGEPAVVRKALVQIASRLHEN 216
+Q+ E VR+A+ I SRL ++
Sbjct: 606 VQITEEFPNVREAIFHITSRLRDS 629
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFIS 312
E ++ +++C N GGVIG GG +++ + E+GA I V G DDC +I ++
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV---GNALDDCEERLIAVT 514
Query: 313 TKEFFE-DPSPTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGA 367
E E SP A + + R E + D IT R++VP++QIGC++G+GG
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGV 574
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
I+SEMR T A+I+IL E PK E++++VQIT A+ +T RLR + F
Sbjct: 575 IVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 101/179 (56%), Gaps = 23/179 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE- 104
+R LCPL +G++IGK G ++KQL+ T + IR+ E G +R++TI + ++ + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 -------------DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ VS AQ AL +V + + AE AD + + R+L +
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE---ADSD-----TVVCRLLTESSH 160
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
G VIGKGGQ++ +IR ET +I I + E+LP+CA + DE+++V G V+KALV I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSIS 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 35/214 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI----------- 311
+ RL+CP ++G VIGK G +IKQ++Q +GA I+V+ + D +I I
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 312 -------STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + ++ ++ A + E E+ + R+L S+ G +IG+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 365 GGAIISEMRSAT--RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT------ 416
GG ++ +R T + SIRI EN+P A D+EMV++ G+ AL ++
Sbjct: 168 GGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSISRCLQNC 224
Query: 417 -----LRLRAN-TFEREGALAAHPPVLPYVPMSL 444
+R+ N E+E + H P+ + SL
Sbjct: 225 QSIDKVRMVGNRPLEKEFQASLHRPIETIIQESL 258
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 37/160 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAG 197
+ ++L + G VIG GG+V++ + +ET A I + L D L A++ E +
Sbjct: 464 VVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASENPECQS 523
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
PA +KA++ I SRL E L+++ + D
Sbjct: 524 SPA--QKAIMLIFSRLFE---------LATNKIL-----------------------DNG 549
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ RLV P IG V+GKGG I+ ++R+ +GA+I++
Sbjct: 550 PRSSITARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQI 589
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 15/203 (7%)
Query: 16 QSDAATNGGSKRRN--PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSET 73
+SD A NG K+++ P + ++ ++V+R L P +K+G+IIG+ GE +K++ E+
Sbjct: 80 ESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEES 139
Query: 74 KSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
K+ I+I + PG ER V I + E +SPA D LFRV+ RI + S D
Sbjct: 140 KARIKILDGPPGVPERTVMISAKDE-------PDAPISPAMDGLFRVYKRIT-DGSDGDS 191
Query: 134 EFGELTLITV---RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFD 190
E + V R+LVPA Q G +IGK G I++I+ +++ +RI+ E LPL AL+ D
Sbjct: 192 GQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDD 249
Query: 191 ELLQVAGEPAVVRKALVQIASRL 213
++++ GEP V+KAL IAS L
Sbjct: 250 RVVEIQGEPVGVQKALESIASHL 272
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +ES A IK+ + + IS K+ + P
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + R+ R ++ ++ +SG P V TR+LVP++Q G LIG+ GA I ++
Sbjct: 169 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 228
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER------E 427
++++ +RI+ E +P VA D+ +V+I G AL + LR +R E
Sbjct: 229 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFE 286
Query: 428 GALAAH 433
G + H
Sbjct: 287 GQMKMH 292
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 15/203 (7%)
Query: 16 QSDAATNGGSKRRN--PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSET 73
+SD A NG K+++ P + ++ ++V+R L P +K+G+IIG+ GE +K++ E+
Sbjct: 78 ESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEES 137
Query: 74 KSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
K+ I+I + PG ER V I + E +SPA D LFRV+ RI + S D
Sbjct: 138 KARIKILDGPPGVPERTVMISAKDE-------PDAPISPAMDGLFRVYKRIT-DGSDGDS 189
Query: 134 EFGELTLITV---RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFD 190
E + V R+LVPA Q G +IGK G I++I+ +++ +RI+ E LPL AL+ D
Sbjct: 190 GQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDD 247
Query: 191 ELLQVAGEPAVVRKALVQIASRL 213
++++ GEP V+KAL IAS L
Sbjct: 248 RVVEIQGEPVGVQKALESIASHL 270
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +ES A IK+ + + IS K+ + P
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + R+ R ++ ++ +SG P V TR+LVP++Q G LIG+ GA I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER------E 427
++++ +RI+ E +P VA D+ +V+I G AL + LR +R E
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFE 284
Query: 428 GALAAH 433
G + H
Sbjct: 285 GQMKMH 290
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 106/177 (59%), Gaps = 11/177 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P++K+G IIG+ GE VK++ ET+S I+I E VPG ERIV + +
Sbjct: 9 DNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAR------ 62
Query: 103 FEDSGEFVSPAQDALFRVHDRIV--AEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKG 159
ED +SPA + L RVH R++ AE AD E ++ R+LV A Q G +IG+
Sbjct: 63 -EDPEAAISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQ 121
Query: 160 GQVIQNIRTETRAQIRILK-DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I++I+ + A +R+L E LPLCAL+ D +++V GEP V++A + + L +
Sbjct: 122 GATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRK 178
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RL+ P +GG+IG+ G +K++ +E+ + IK+ + I+ +S +E DP
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSARE---DPEAA 68
Query: 321 -SPTITAALRLQPRCSEKTERESGDPVI-------TTRILVPSAQIGCLIGRGGAIISEM 372
SP + LR+ R E E ES D I ++R+LV + Q G LIGR GA I +
Sbjct: 69 ISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSI 128
Query: 373 RSATRASIRIL-TNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ ++ A++R+L E +P A D+ +V++TG A V LR +R
Sbjct: 129 QDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDR 183
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 53/268 (19%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R ++D ++R + P R+IG +IGK G ++++R ETK+ I+I++ + +ER++ I S
Sbjct: 52 KRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISS 111
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF----GELTLITVRMLVPADQ 151
+DS +S A++AL + I+ ED D G + +R+L+ Q
Sbjct: 112 --------KDSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQ 163
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
GC+IG GQ I+ +R + A I IL LPLCA + D ++Q++G+ V KAL +I
Sbjct: 164 AGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEI 223
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
+L R +A +L ++ P
Sbjct: 224 GCQL---------------------------------------RTTNLAADYVTLNMMIP 244
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV 297
+GG+IG+ G I +IR ESGA IKV
Sbjct: 245 ETLVGGLIGRCGSNISRIRNESGAMIKV 272
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 98/186 (52%), Gaps = 10/186 (5%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
++ + + A ++ R+V P+ IG VIGK G I++IR+E+ A+IK+ + A ++ +
Sbjct: 47 DHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERV 106
Query: 309 IFISTKE---FFEDPSPTI--TAALRLQPRCSEKTERESGDPVITT---RILVPSAQIGC 360
I IS+K+ D + A+L L+ S + G + R+L+ +Q GC
Sbjct: 107 IIISSKDSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGC 166
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I ++R+++ A+I IL +P A++ + MVQI+G + AL ++ +
Sbjct: 167 LIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQ 226
Query: 419 LRANTF 424
LR
Sbjct: 227 LRTTNL 232
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 45/266 (16%)
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
VA+D + + + R++VP+ QIG VIGK G IQ IR ET+A I+I
Sbjct: 44 VADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKI-------- 95
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENP-SRSQHLLLSSSSNIYQSSGVYLSAPL 243
A A + ++ I+S+ EN S +++ LL +S I + A
Sbjct: 96 -----------ADAIARHEERVIIISSKDSENVISDAENALLQXASLILKEDDSNTDALK 144
Query: 244 VGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV------ 297
VG G+ A ++RL+ G +IG G I+++R SGA+I +
Sbjct: 145 VG-VGHVVAN---------AIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQL 194
Query: 298 -DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
+ A D ++ IS P + AL + C +T + D +T +++P
Sbjct: 195 PLCASAHDSDRMVQISGD------VPAVLKALE-EIGCQLRTTNLAAD-YVTLNMMIPET 246
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
+G LIGR G+ IS +R+ + A I++
Sbjct: 247 LVGGLIGRCGSNISRIRNESGAMIKV 272
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQ 331
+G +IGKGG I+ ++ E+GA IK+ A+ D+ ++ IS +E + SP A +R+
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVRVY 67
Query: 332 PRCSEKT-ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
R SE + +R S P R+LVPS IGCL+G+GG+II+EMR T ASIRI NE +P+
Sbjct: 68 SRISEASMDRSSPTPA---RLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPR 124
Query: 391 VAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE---GALAAHPPV 436
A ++EMVQ+TGS AL +T R+R + G + +PPV
Sbjct: 125 CAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPV 173
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 156/360 (43%), Gaps = 66/360 (18%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+GSIIGKGG ++ L+SET + I+I E V DER+V I S+ E +++ SPAQ
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAI-SARENSDMMH------SPAQ 60
Query: 115 DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQI 174
DA+ RV+ RI ++ + R+LVP+ IGC++GKGG +I +R T A I
Sbjct: 61 DAVVRVYSRI------SEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASI 114
Query: 175 RILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQS 234
RI +E +P CA DE++QV G ++ AL+ I R+ + ++L
Sbjct: 115 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD-------VILPKP----HP 163
Query: 235 SGVYLSAPLVGSYGNYSARRDEASAR-----------EFSLRLVCPAGNIGGVIGKGGGI 283
SG P VG+ + +R++ S R P G+ G
Sbjct: 164 SGGMPPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFE--TGDHRPP 221
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
+ GA S G E + F E PSP PR + + R
Sbjct: 222 PVHSMEYMGADRMPYSYGGEQG------GPRPFLEQPSPRTWPP--EAPRTNSEAPRNMP 273
Query: 344 DPVI---------------------TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
D V+ TT +++P IG + G G+ I E+R + ASI +
Sbjct: 274 DAVLATDLRKGPVASENQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITV 333
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 43/156 (27%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK---DEHLPLCALSFDELLQVAGEPAV 201
M++ + +G +IGKGG I+ +++ET A I+IL+ D + A+S E + PA
Sbjct: 1 MIILNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPA- 59
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
+ A+V++ SR+ E A D +S
Sbjct: 60 -QDAVVRVYSRISE------------------------------------ASMDRSSPT- 81
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
RL+ P+ +IG ++GKGG II ++R+ +GASI++
Sbjct: 82 -PARLLVPSQHIGCLLGKGGSIITEMRKITGASIRI 116
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSE 98
S T R L P + IG ++GKGG I+ ++R T ++IRI +E +P C +R
Sbjct: 78 SSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPRCAQR--------- 128
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRI 124
+ + +G F S QDAL + RI
Sbjct: 129 NDEMVQVTGSFQS-IQDALLHITGRI 153
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 21/197 (10%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
AT GG ++R PG E TV+R L P +K+GSIIG+ G+++K++ ET++ I+I
Sbjct: 171 ATVGGEEKRWPGWPGE--------TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKI 222
Query: 80 SETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL- 138
+ PG ER V + E + + P+ D L RVH RIV D L D E +
Sbjct: 223 LDGPPGTTERAVMVSGKEEPES-------SLPPSMDGLLRVHMRIV--DGL-DGEASQAP 272
Query: 139 --TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVA 196
+ ++ R+LVPA Q G +IGK G ++ I+ + +R+L E LP+ AL D +++V
Sbjct: 273 PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVV 332
Query: 197 GEPAVVRKALVQIASRL 213
GEP V +AL IAS L
Sbjct: 333 GEPTSVHRALELIASHL 349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G +IK+I +E+ A IK+ + + +S KE E
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 321 -SPTITAALRLQPRCSEKTERESGDPV----ITTRILVPSAQIGCLIGRGGAIISEMRSA 375
P++ LR+ R + + E+ ++TR+LVP++Q G LIG+ G + ++ A
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ +R+L +E++P A +D+ +V++ G AL + LR +R
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 21/197 (10%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
AT GG ++R PG E TV+R L P +K+GSIIG+ G+++K++ ET++ I+I
Sbjct: 171 ATVGGEEKRWPGWPGE--------TVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKI 222
Query: 80 SETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL- 138
+ PG ER V + E + + P+ D L RVH RIV D L D E +
Sbjct: 223 LDGPPGTTERAVMVSGKEEPES-------SLPPSMDGLLRVHMRIV--DGL-DGEASQAP 272
Query: 139 --TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVA 196
+ ++ R+LVPA Q G +IGK G ++ I+ + +R+L E LP+ AL D +++V
Sbjct: 273 PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVV 332
Query: 197 GEPAVVRKALVQIASRL 213
GEP V +AL IAS L
Sbjct: 333 GEPTSVHRALELIASHL 349
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G +IK+I +E+ A IK+ + + +S KE E
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 321 -SPTITAALRLQPRCSEKTERESGDPV----ITTRILVPSAQIGCLIGRGGAIISEMRSA 375
P++ LR+ R + + E+ ++TR+LVP++Q G LIG+ G + ++ A
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ +R+L +E++P A +D+ +V++ G AL + LR +R
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 21/210 (10%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVK 67
NY + +GG +++ PG E +V+R L P +K+GSIIG+ GE +K
Sbjct: 124 NYQAQEKGHDADTVSGGIEKKWPGWPGE--------SVFRMLVPAQKVGSIIGRKGEFIK 175
Query: 68 QLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
++ ET++ I+I + PG ER V + + E DS + PA D L RVH RIV
Sbjct: 176 KIVEETRARIKILDGPPGTTERAVMVSAKEE-----PDSA--LPPAMDGLLRVHKRIV-- 226
Query: 128 DSLADDEF----GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
D L D G T ++ R+LVPA Q G +IGK G +++I+ + +R+L E LP
Sbjct: 227 DGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLP 286
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRL 213
+ AL D +++V G+ A V KA+ IAS L
Sbjct: 287 VFALQDDRVVEVLGDAAGVHKAVELIASHL 316
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 33/241 (13%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK+I +E+ A IK+ + + +S KE +
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 321 -SPTITAALRLQPRCSEKTERESGDPV------ITTRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ R + + +S ++TR+LVP++Q G LIG+ G + ++
Sbjct: 211 LPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQ 270
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAH 433
A+ +R+L E++P A +D+ +V++ G A+ + LR +R
Sbjct: 271 EASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDRS------ 324
Query: 434 PPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGG--SLSGGGNAY 491
++P M + + N ++P S+G G +GGG Y
Sbjct: 325 --IIPLFEMHMQMQ----------------NPPHMEHMPPHQSWGPPQGIPPNAGGGPGY 366
Query: 492 G 492
G
Sbjct: 367 G 367
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
RMLVPA ++G +IG+ G+ I+ I ETRA+I+IL G P
Sbjct: 155 RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD------------------GPPGTTE 196
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
+A++ A E P + + +++ +V S+ + + S
Sbjct: 197 RAVMVSAK---EEPDSALPPAMDGLLRVHKR--------IVDGLDGDSSHASSGTGTKVS 245
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
RL+ PA G +IGK GG +K I++ S ++V GAE D +F
Sbjct: 246 TRLLVPASQAGSLIGKQGGTVKSIQEASSCVVRV--LGAE--DLPVF 288
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 100/173 (57%), Gaps = 9/173 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+G IIG+ GE +K++ ET++ ++I + PG +R V I +
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAK------ 96
Query: 103 FEDSGEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E+ G V PA D L R+H RI+ E G ++ ++LVPA Q G +IGK G
Sbjct: 97 -EEPGSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQG 155
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+++I+ + +R+L E LP+ AL D +++V G+PA V KAL IAS L
Sbjct: 156 GTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +GG+IG+ G IK+I +E+ A +K+ + IS KE +P
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKE---EP 99
Query: 321 ----SPTITAALRLQPRC-----SEKTERESGDP-VITTRILVPSAQIGCLIGRGGAIIS 370
P + LR+ R S+ T SG ++T++LVP++Q G LIG+ G +
Sbjct: 100 GSSVPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVK 159
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
++ A+ +R+L E++P A +D+ +V++ G AL + LR +R
Sbjct: 160 SIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDR 215
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 33/167 (19%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
RMLVPA ++G +IG+ G+ I+ I ETRA+++IL G P V+
Sbjct: 47 RMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILD------------------GPPGTVQ 88
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
+A V I+++ E P S + I++ ++ + A + S
Sbjct: 89 RA-VMISAK--EEPGSSVPPAVDGLLRIHKR--------IIDGLESDFTHAPSGVAGKVS 137
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
+L+ PA G +IGK GG +K I++ S ++V GAE D IF
Sbjct: 138 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV--LGAE--DLPIF 180
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 117/201 (58%), Gaps = 15/201 (7%)
Query: 18 DAATNGGSKRRN--PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
D A NG K+++ P + ++ ++V+R L P +K+G+IIG+ GE +K++ E+K+
Sbjct: 80 DNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKA 139
Query: 76 NIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF 135
I+I + PG ER V I + E +SPA D LFRV+ RI + S D
Sbjct: 140 RIKILDGPPGVPERTVMISAKDE-------PDAPISPAMDGLFRVYKRIT-DGSDGDSGQ 191
Query: 136 GELTLITV---RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
E + V R+LVPA Q G +IGK G I++I+ +++ +RI+ E LPL AL+ D +
Sbjct: 192 PERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRV 249
Query: 193 LQVAGEPAVVRKALVQIASRL 213
+++ GEP V+KAL IAS L
Sbjct: 250 VEIQGEPVGVQKALESIASHL 270
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +ES A IK+ + + IS K+ + P
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + R+ R ++ ++ +SG P V TR+LVP++Q G LIG+ GA I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER------E 427
++++ +RI+ E +P VA D+ +V+I G AL + LR +R E
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFE 284
Query: 428 GALAAH 433
G + H
Sbjct: 285 GQMKMH 290
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 119/203 (58%), Gaps = 15/203 (7%)
Query: 16 QSDAATNGGSKRRN--PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSET 73
+SD A NG K+++ P + ++ ++V+R L P +K+G+IIG+ GE +K++ E+
Sbjct: 78 ESDNAYNGEVKQQDSLPVEADKKWPGWPGESVFRILIPAQKVGAIIGRKGEFIKKMCEES 137
Query: 74 KSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
K+ I+I + PG ER V I + E +SPA D LFRV+ RI + S D
Sbjct: 138 KARIKILDGPPGVPERTVMISAKDE-------PDAPISPAMDGLFRVYKRIT-DGSDGDS 189
Query: 134 EFGELTLITV---RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFD 190
E + V R+LVPA Q G +IGK G I++I+ +++ +RI+ E LPL AL+ D
Sbjct: 190 GQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDD 247
Query: 191 ELLQVAGEPAVVRKALVQIASRL 213
++++ GEP V+KAL IAS L
Sbjct: 248 RVVEIQGEPVGVQKALESIASHL 270
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 97/186 (52%), Gaps = 15/186 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +ES A IK+ + + IS K+ + P
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + R+ R ++ ++ +SG P V TR+LVP++Q G LIG+ GA I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER------E 427
++++ +RI+ E +P VA D+ +V+I G AL + LR +R E
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDRSVLPLFE 284
Query: 428 GALAAH 433
G + H
Sbjct: 285 GQMKMH 290
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 104/170 (61%), Gaps = 14/170 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKE 315
EFS+R++C + IG VIGK G ++++ Q++GA IKV D+SG + +I IS+ E
Sbjct: 32 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASG----ERLIIISSNE 87
Query: 316 FFEDP-SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+P SP I A + L + S +E+ +TR++VPS+++GC+IG GG +I++MR
Sbjct: 88 IPAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRR 143
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
T A IR+ + + PK D+E+VQ+ G +A AL+++ RLR T
Sbjct: 144 RTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLRTRTL 193
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 23/192 (11%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEG 99
+E+ R LC IGS+IGK G V+++ +T + I++ E ER++ I S+
Sbjct: 30 TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSN--- 86
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
E E +SPA +AL +HD++ A E + R++VP+ ++GC+IG+G
Sbjct: 87 ----EIPAEPISPAIEALILLHDKVSAP--------SEKHHSSTRLVVPSSKVGCIIGEG 134
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSF-DELLQVAGEPAVVRKALVQIASRLHENPS 218
G+VI ++R T A+IR+ P LSF DEL+QVAG P + R AL +IASRL
Sbjct: 135 GKVITDMRRRTGAEIRVYSKADKPKY-LSFDDELVQVAGPPTIARGALTEIASRL----- 188
Query: 219 RSQHLLLSSSSN 230
R++ L +S++N
Sbjct: 189 RTRTLRDTSTAN 200
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P++ +G ++G GG ++E+R + A +R+ A E +V+I G+LD
Sbjct: 422 TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQ 476
Query: 408 ASSALSQVTLRLRANTFEREGALAAHPPVLP 438
A +A S + + AN+ +++ ++ P+ P
Sbjct: 477 AKAAQSLLQGFISANSRQQQQPYSSRMPLYP 507
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 12/174 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+GSIIG+ GE +K++ ET++ I+I + PG ER V + + E +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL---TLITVRMLVPADQIGCVIGKG 159
F PA D L RVH RIV D L D + ++ R+LV A Q G +IGK
Sbjct: 144 F-------PPAVDGLLRVHKRIV--DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQ 194
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G +++I+ E+ +R+L E LP+ AL D +++V G+PA V KA+ IAS L
Sbjct: 195 GGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED 319
E R++ PA +G +IG+ G IK+I +E+ A IK+ D + ++ + E
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-----ITTRILVPSAQIGCLIGRGGAIISEMRS 374
P + LR+ R + E ++ ++TR+LV ++Q G LIG+ G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
+ +R+L +E++P A +D+ +V++ G A+ + LR +R
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS------- 256
Query: 435 PVLPYVPMSLDITD 448
++P M++ +++
Sbjct: 257 -IIPVFEMNMQMSN 269
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 9/173 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+G IIG+ GE +K++ ET++ ++I + PG +R V I +
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAK------ 99
Query: 103 FEDSGEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E+ G V PA D L RVH RI+ E G ++ ++LVPA Q G +IGK G
Sbjct: 100 -EEPGSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQG 158
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+++I+ + +R+L E LP+ AL D +++V G+P V KAL IAS L
Sbjct: 159 GTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 89/176 (50%), Gaps = 13/176 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +GG+IG+ G IK+I +E+ A +K+ + IS KE +P
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKE---EP 102
Query: 321 ----SPTITAALRLQPRC-----SEKTERESGDP-VITTRILVPSAQIGCLIGRGGAIIS 370
P + LR+ R S+ T SG ++T++LVP++Q G LIG+ G +
Sbjct: 103 GSSVPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVK 162
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
++ A+ +R+L E++P A +D+ +V++ G AL + LR +R
Sbjct: 163 SIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDR 218
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 33/167 (19%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
RMLVPA ++G +IG+ G+ I+ I ETRA+++IL G P V+
Sbjct: 50 RMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILD------------------GPPGTVQ 91
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
+A V I+++ E P S + +++ ++ + A + S
Sbjct: 92 RA-VMISAK--EEPGSSVPPAVDGLLRVHKR--------IIDGLESDFTHAPSGVAGKVS 140
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
+L+ PA G +IGK GG +K I++ S ++V GAE D IF
Sbjct: 141 TKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRV--LGAE--DLPIF 183
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 109/198 (55%), Gaps = 19/198 (9%)
Query: 18 DAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
D + GG ++R PG E +V+R L P +K+GSIIG+ GE +K++ ET++ I
Sbjct: 30 DDSAIGGGEKRWPGWPGE--------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 81
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD--EF 135
+I + PG ER V + + E DS + PA D L +VH RIV D L D
Sbjct: 82 KILDGPPGTAERAVMVSAKEE-----PDSS--LPPAMDGLLKVHKRIV--DGLEGDSSHM 132
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
++ R+LV A Q G +IGK G +++I+ + +R+L E LP+ AL D +++V
Sbjct: 133 PPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEV 192
Query: 196 AGEPAVVRKALVQIASRL 213
GEP V KA+ IAS L
Sbjct: 193 VGEPIGVHKAVELIASHL 210
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 13/201 (6%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFI 311
+R E R++ PA +G +IG+ G IK+I +E+ A IK+ D + ++
Sbjct: 39 KRWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVS 98
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGD-PV---ITTRILVPSAQIGCLIGRGGA 367
+ +E P + L++ R + E +S P ++TR+LV ++Q G LIG+ G
Sbjct: 99 AKEEPDSSLPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGG 158
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+ ++ A+ +R+L E++P A +D+ +V++ G A+ + LR +R
Sbjct: 159 TVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRS 218
Query: 428 GALAAHPPVLPYVPMSLDITD 448
V+P M + +++
Sbjct: 219 --------VIPLFEMQMQMSN 231
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 109/198 (55%), Gaps = 19/198 (9%)
Query: 18 DAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
D + GG ++R PG E +V+R L P +K+GSIIG+ GE +K++ ET++ I
Sbjct: 99 DDSAIGGGEKRWPGWPGE--------SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARI 150
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD--EF 135
+I + PG ER V + + E DS + PA D L +VH RIV D L D
Sbjct: 151 KILDGPPGTAERAVMVSAKEE-----PDSS--LPPAMDGLLKVHKRIV--DGLEGDSSHM 201
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
++ R+LV A Q G +IGK G +++I+ + +R+L E LP+ AL D +++V
Sbjct: 202 PPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEV 261
Query: 196 AGEPAVVRKALVQIASRL 213
GEP V KA+ IAS L
Sbjct: 262 VGEPIGVHKAVELIASHL 279
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 94/193 (48%), Gaps = 13/193 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED 319
E R++ PA +G +IG+ G IK+I +E+ A IK+ D + ++ + +E
Sbjct: 116 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 175
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV----ITTRILVPSAQIGCLIGRGGAIISEMRSA 375
P + L++ R + E +S ++TR+LV ++Q G LIG+ G + ++ A
Sbjct: 176 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 235
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
+ +R+L E++P A +D+ +V++ G A+ + LR +R
Sbjct: 236 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRS-------- 287
Query: 436 VLPYVPMSLDITD 448
V+P M + +++
Sbjct: 288 VIPLFEMQMQMSN 300
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 17/176 (9%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R L P +K+G+IIG+ GE +K++ ++K+ I+I + PG ER V I + E
Sbjct: 113 DSVFRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDE---- 168
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIG 157
E +SPA D L R+H RI +D EFG+ + R+LVPA Q G +IG
Sbjct: 169 ---PDEPISPAMDGLLRIHKRIT---DGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIG 222
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
K G I++I+ +++ +RI+ E++P AL+ D ++++ GEP V KA+ IA+ L
Sbjct: 223 KQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHL 276
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 92/164 (56%), Gaps = 9/164 (5%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++ PA +G +IG+ G IK++ ++S A IK+ + + IS K+ ++P SP
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 323 TITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ LR+ R ++ ++ E G P V TR+LVP++Q G LIG+ GA I ++ ++
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
++ +RI+ ENVP VA D+ +V+I G A+ + LR
Sbjct: 236 KSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLR 277
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 16/214 (7%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIG 60
+ G N+G + GG ++ PG E V+R L P++K+GSIIG
Sbjct: 127 IGGDVTENFGSEEKRGPEEDLKGGEVKKWPGWPGE--------NVFRMLVPVQKVGSIIG 178
Query: 61 KGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRV 120
+ GE ++++ +TK+ I+I + PG ER V + + E+ + PA D L RV
Sbjct: 179 RKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAK-------EEPDCSIPPAVDGLLRV 231
Query: 121 HDRIVAEDS-LADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
H ++V D AD G + + R+LV Q G +IGK G I++ + T IRIL
Sbjct: 232 HKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGS 291
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
EHLP+ AL D ++++ GE + V KA+ +A L
Sbjct: 292 EHLPVFALRDDSIVEIQGESSGVHKAVELVAIHL 325
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 14/176 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P +G +IG+ G I++I +++ A IK+ + + +S KE +P
Sbjct: 161 ENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKE---EP 217
Query: 321 S----PTITAALRLQPRC----SEKTERESGD--PVITTRILVPSAQIGCLIGRGGAIIS 370
P + LR+ + + SG PV+T R+LV Q G LIG+ G+ I
Sbjct: 218 DCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVT-RLLVADTQAGSLIGKQGSTIK 276
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ AT +IRIL +E++P A D+ +V+I G A+ V + LR +R
Sbjct: 277 SFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHLRKFLVDR 332
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 102/174 (58%), Gaps = 12/174 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+GSIIG+ GE +K++ ET++ I+I + PG ER V + + E +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL---TLITVRMLVPADQIGCVIGKG 159
F PA D L RVH RIV D L D + ++ R+LV A Q G +IGK
Sbjct: 144 F-------PPAVDGLLRVHKRIV--DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQ 194
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G +++I+ E+ +R+L E LP+ AL D +++V G+PA V KA+ IAS L
Sbjct: 195 GGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 14/194 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED 319
E R++ PA +G +IG+ G IK+I +E+ A IK+ D + ++ + E
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-----ITTRILVPSAQIGCLIGRGGAIISEMRS 374
P + LR+ R + E ++ ++TR+LV ++Q G LIG+ G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
+ +R+L +E++P A +D+ +V++ G A+ + LR +R
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDRS------- 256
Query: 435 PVLPYVPMSLDITD 448
++P M++ +++
Sbjct: 257 -IIPVFEMNMQMSN 269
>gi|3548819|gb|AAC34491.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 155
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 64/127 (50%), Positives = 90/127 (70%), Gaps = 9/127 (7%)
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFEDSGE-FVSPAQDALFRVHDRIVAEDSLADDEF 135
+R++E +PGCDER+VTIYS+SE N ED E FV PA DALF+VHD +V E+ DD++
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 136 GEL-------TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALS 188
+ T++TVRMLVP+DQIG +IGKGG +IQ +R +T AQIR+ ++++LP+C
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEK 119
Query: 189 FDELLQV 195
+L V
Sbjct: 120 ARTILMV 126
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP 389
G V+T R+LVPS QIG LIG+GG II +R+ T A IR+ N+N+P
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLP 114
Score = 45.1 bits (105), Expect = 0.084, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTI 93
G R L P +IG +IGKGG I++ LR++T + IR+ ++ +P C E+ TI
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMCTEKARTI 123
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 8/197 (4%)
Query: 18 DAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI 77
D+ GS+ + G+E ++ + V+R L P++K+GSIIG+ GE +K++ ETK+ I
Sbjct: 99 DSLPKQGSEIDSKGNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARI 158
Query: 78 RISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED-SLADDEFG 136
+I + PG ER V + + E+ + PA D L RVH +++ D LAD
Sbjct: 159 KILDGPPGISERAVMVSAK-------EEPDCPIPPAVDGLLRVHKQVINVDRDLADSALA 211
Query: 137 ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVA 196
+ R+LV Q G +IGK G I++I+ + IR+L E+LP+ AL D ++++
Sbjct: 212 AGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQ 271
Query: 197 GEPAVVRKALVQIASRL 213
GE A V KA+ IA L
Sbjct: 272 GESAGVHKAVELIAVHL 288
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P +G +IG+ G IK+I +E+ A IK+ + + +S KE + P
Sbjct: 124 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCP 183
Query: 321 -SPTITAALRLQPRCSEKTERESGDPV------ITTRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ + +R+ D + TR+LV Q G LIG+ G+ I ++
Sbjct: 184 IPPAVDGLLRVHKQVI-NVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 242
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ +IR+L +EN+P A D+ +V+I G A+ + + LR +R
Sbjct: 243 DGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 295
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 16/209 (7%)
Query: 6 NINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEI 65
N N G++ + + T G++++ PG E V+R L P +K+G IIG+ GE
Sbjct: 20 NANPGQKRGREEEIGTGTGAEKKWPGWPGE--------NVFRMLVPSQKVGGIIGRKGEF 71
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
VK++ ET+S I+I + + G ER+V + + E+ +SPA D + +VH RI+
Sbjct: 72 VKKMCEETRSRIKILDGLSGTPERVVMVSAK-------EEPDATISPAMDGILKVHKRII 124
Query: 126 -AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
D + + R+L+ Q G +IGK G I++I+ + +++ E +P
Sbjct: 125 EGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGSEDIPY 184
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRL 213
CAL+ D++L++ GEPA V KAL + S L
Sbjct: 185 CALADDKVLEIQGEPANVHKALELVVSHL 213
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 104/201 (51%), Gaps = 22/201 (10%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P+ +GG+IG+ G +K++ +E+ + IK+ + + ++ +S KE +P
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKE---EP 105
Query: 321 SPTITAA----LRLQPRCSE------KTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
TI+ A L++ R E +T++ +G P IT R+L+ Q G LIG+ GA I
Sbjct: 106 DATISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTIT-RLLLAGIQSGSLIGKQGATIK 164
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
++ + + +++ +E++P A D+++++I G AL V LR +R
Sbjct: 165 SIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDRS--- 221
Query: 431 AAHPPVLPYVPMSLDITDGSK 451
VLP M++ T+ S+
Sbjct: 222 -----VLPMYEMNMSKTNQSQ 237
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/173 (39%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P++K+G++IG+ GE +K++ E+++ I+I + PG ER V I + E L
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 103 FEDSGEFVSPAQDALFRVHDRIV-AEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGG 160
VSPA D L RVH RI DS D + G + R+LVPA Q G +IGK G
Sbjct: 185 -------VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQG 237
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ ++ +RIL E++P AL+ D ++++ GEP V KA+ IAS L
Sbjct: 238 ATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHL 288
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 95/177 (53%), Gaps = 17/177 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P +G VIG+ G IK++ +ES A IK+ + + IS K+ +P
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKD---EP 181
Query: 321 ----SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIIS 370
SP + LR+ R ++ + E+ P V TR+LVP++Q G LIG+ GA I
Sbjct: 182 DALVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIK 241
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITG-SLDVASSALSQVTLRLRANTFER 426
++ A++ ++RIL ENVP VA D+ +V+I G LDV A+ + LR +R
Sbjct: 242 SIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDV-HKAVELIASHLRKFLVDR 295
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R L P + +G IIG+ GE VK++ ET+S I+I E + G ER V + +
Sbjct: 84 DNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAK------ 137
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT-----LITVRMLVPADQIGCVIG 157
E+ VSPA D + RVH RI+ E G I+ R+LV Q G +IG
Sbjct: 138 -EEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIG 196
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+ G I+ I+ + A +R+L E LP CAL+ D L++V GE V KA+ I S L +
Sbjct: 197 RQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRK 254
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +GG+IG+ G +K++ +E+ + IK+ + + +S KE E P SP
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 323 TITAALRLQPRCSEK---------TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+ LR+ R E ++ G I+TR+LV Q G LIGR GA I ++
Sbjct: 147 AMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQ 206
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ A +R+L E++P A D+ +V++ G A+ + LR +R
Sbjct: 207 EGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDR 259
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
+ V+R L P++K+G IIG+ GE +K+L ETK+ I+I + PG ER V + +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAK------ 92
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E+ ++PA D L RVH I+ +S G +++ R+LV A Q G +IGK G
Sbjct: 93 -EEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAG--VMVSTRLLVVAAQAGSLIGKQGAT 149
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ + +R+L E+LPL AL D ++++ GEPA V KA+ IAS L
Sbjct: 150 IKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 6/170 (3%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P +G +IG+ G IK++ +E+ A IK+ + + +S KE + P
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 321 -SPTITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+P I LR+ +C E + + +++TR+LV +AQ G LIG+ GA I ++ A+
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+R+L EN+P A +++ +V+I G A+ + LR +R
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 107/176 (60%), Gaps = 17/176 (9%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+G+IIG+ GE +K++ ETK+ I+I + PG ER V I + E
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDE---- 175
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIG 157
+SPA D L RVH RI DS ++ E G+L + R+LVP+ Q G +IG
Sbjct: 176 ---PDAPLSPAVDGLLRVHKRIT--DS-SNGESGQLQRSAGNIGPTRLLVPSSQAGSLIG 229
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
K G I++I+ +++ +RI+ E++P AL+ D ++++ GEP V+KA+ IAS L
Sbjct: 230 KQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHL 283
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +E+ A IK+ + + IS K+ + P
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 321 -SPTITAALRLQPRCSEKTERESGD------PVITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + LR+ R ++ + ESG + TR+LVPS+Q G LIG+ GA I ++
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
++++ +RI+ ENVP VA D+ +V+I G A+ + LR +R
Sbjct: 240 DSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDR 290
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
+ V+R L P++K+G IIG+ GE +K+L ETK+ I+I + PG ER V + +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAK------ 92
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E+ ++PA D L RVH I+ +S G +++ R+LV A Q G +IGK G
Sbjct: 93 -EEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAG--VMVSTRLLVVAAQAGSLIGKQGAT 149
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ + +R+L E+LPL AL D ++++ GEPA V KA+ IAS L
Sbjct: 150 IKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++ P +G +IG+ G IK++ +E+ A IK+ + + +S KE + P +P
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 323 TITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
I LR+ +C E + + +++TR+LV +AQ G LIG+ GA I ++ A+
Sbjct: 102 AIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCI 160
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+R+L EN+P A +++ +V+I G A+ + LR +R
Sbjct: 161 VRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G+E ++ + V+R L P++K+GSIIG+ GE +K++ ETK+ I+I + PG ER
Sbjct: 113 GNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERA 172
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED-SLADDEFGELTLITVRMLVPA 149
V + + E+ + PA D L RVH +++ D L D + R+LV
Sbjct: 173 VMVSAK-------EEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVAD 225
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
Q G +IGK G I++I+ + IR+L E+LP+ AL D ++++ GE A V KA+ I
Sbjct: 226 TQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELI 285
Query: 210 ASRL 213
A L
Sbjct: 286 AVHL 289
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 8/173 (4%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ P +G +IG+ G IK+I +E+ A IK+ + + +S KE + P
Sbjct: 125 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRP 184
Query: 321 -SPTITAALRLQPRCSEKTERESGDPV------ITTRILVPSAQIGCLIGRGGAIISEMR 373
P I LR+ + +R+ D + TR+LV Q G LIG+ G+ I ++
Sbjct: 185 IPPAIDGLLRVHKQVI-NVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 243
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+ +IR+L +EN+P A D+ +V+I G A+ + + LR +R
Sbjct: 244 DGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 296
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 102/175 (58%), Gaps = 15/175 (8%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P +K+G+IIG+ GE +K++ ETK+ I+I + PG ER V I + E
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDE---- 175
Query: 103 FEDSGEFVSPAQDALFRVHDRIV----AEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
+SPA D L RVH RI E S G + R+LVP+ Q G +IGK
Sbjct: 176 ---PDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG--PTRLLVPSSQAGSLIGK 230
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G I++I+ +++ +RI+ E++P AL+ D ++++ GEP V+KA+ I+S L
Sbjct: 231 QGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHL 283
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +E+ A IK+ + + IS K+ + P
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + LR+ R ++ ++ ES P + TR+LVPS+Q G LIG+ GA I ++
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 239
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
++++ +RI+ ENVP VA D+ +V+I G A+ ++ LR +R
Sbjct: 240 DSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDR 290
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 100/178 (56%), Gaps = 11/178 (6%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G E +R L P +K+GSIIG+ GE +K++ ET++ I+I + PG ER V + + E
Sbjct: 124 GLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEE- 182
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD--EFGELTLITVRMLVPADQIGCVIG 157
DS + PA D L +VH RIV D L D ++ R+LV A Q G +IG
Sbjct: 183 ----PDSS--LPPAMDGLLKVHKRIV--DGLEGDSSHMPPGGKVSTRLLVAASQAGSLIG 234
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
K G +++I+ + +R+L E LP+ AL D +++V GEP V KA+ IAS L +
Sbjct: 235 KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRK 292
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSP 322
R++ PA +G +IG+ G IK+I +E+ A IK+ D + ++ + +E P
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP 189
Query: 323 TITAALRLQPRCSEKTERESGDPV----ITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
+ L++ R + E +S ++TR+LV ++Q G LIG+ G + ++ A+
Sbjct: 190 AMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNC 249
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
+R+L E++P A +D+ +V++ G A+ + LR +R V+P
Sbjct: 250 IVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDRS--------VIP 301
Query: 439 YVPMSLDITD 448
M + +++
Sbjct: 302 LFEMQMQMSN 311
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 101/173 (58%), Gaps = 11/173 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L +K+G++IG+ GE +K++ E+K+ I+I + PG ER V I + E L
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDAL 178
Query: 103 FEDSGEFVSPAQDALFRVHDRIV-AEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGG 160
V PA D L RVH+RI DS D + G R+LVPA Q G +IGK G
Sbjct: 179 -------VPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQG 231
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ ++ +RIL E++P AL+ D ++++ GEP V KA+ IA+ L
Sbjct: 232 TTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHL 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 23/196 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ +G +IG+ G IK++ ES A IK+ + + IS K+ +P
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKD---EP 175
Query: 321 ----SPTITAALRLQPRCSEKTERES------GDPVITTRILVPSAQIGCLIGRGGAIIS 370
P I LR+ R ++ + E+ P TR+LVP++Q G LIG+ G I
Sbjct: 176 DALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIK 235
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
++ A++ ++RIL ENVP VA D+ +V+I G A+ + LR +R
Sbjct: 236 SIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDRS--- 290
Query: 431 AAHPPVLPYVPMSLDI 446
VLP M + +
Sbjct: 291 -----VLPLFEMQMKV 301
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 96/169 (56%), Gaps = 13/169 (7%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
L P +K+GSIIG+ GE +K++ ET++ I+I + PG ER V + + E DS
Sbjct: 2 LVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEE-----PDSS- 55
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQ 164
+ PA D L RVH RI+ D L D ++ R+LVPA Q G +IGK G ++
Sbjct: 56 -LPPAMDGLLRVHKRII--DGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVK 112
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I+ + +R+L E LP+ AL D +++V GE A V KA+ IAS L
Sbjct: 113 SIQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHL 161
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTI 324
++ PA +G +IG+ G IK+I +E+ A IK+ + + +S KE + P +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 325 TAALRLQPRC-------SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
LR+ R S T SG V +TR+LVP++Q G LIG+ G + ++ A+
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKV-STRLLVPASQAGSLIGKQGGTVKSIQEAST 119
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVL 437
+R+L E++P A +D+ +V++ G A+ + LR +R ++
Sbjct: 120 CIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDRS--------II 171
Query: 438 PYVPMSLDITDGSKYGNRDNQSRG 461
P M + +++ S +QS G
Sbjct: 172 PLFEMQMQMSNPSMEQMPPHQSWG 195
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 33/166 (19%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
MLVPA ++G +IG+ G+ I+ I ETRA+I+IL G P +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILD------------------GPPGTTER 42
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A++ A E P S + +++ ++ + S+ S + S
Sbjct: 43 AVMVSAK---EEPDSSLPPAMDGLLRVHKR--------IIDGLDSDSSNTPPTSGAKVST 91
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
RL+ PA G +IGK GG +K I++ S ++V GAE D +F
Sbjct: 92 RLLVPASQAGSLIGKQGGTVKSIQEASTCIVRV--LGAE--DLPVF 133
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 10/171 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
+ V+R L P++K+G IIG+ GE +K+L ETK+ I+I + PG ER V + +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAK------ 92
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E+ ++PA D L RVH I+ +S G +++ R+LV A Q G +IGK G
Sbjct: 93 -EEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAG--VMVSTRLLVVAAQAGSLIGKQGAT 149
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ + +R+L E+LPL AL D ++++ GEPA V KA+ IAS L
Sbjct: 150 IKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++ P +G +IG+ G IK++ +E+ A IK+ + + +S KE + P +P
Sbjct: 42 FRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAPIAP 101
Query: 323 TITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
I LR+ +C E + + +++TR+LV +AQ G LIG+ GA I ++ A+
Sbjct: 102 AIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEASNCI 160
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+R+L EN+P A +++ +V+I G A+ + LR +R
Sbjct: 161 VRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 192/421 (45%), Gaps = 55/421 (13%)
Query: 37 RGIGSEDT--VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
R G ED +Y + PLR+ + + + ++ + S + + P R V
Sbjct: 46 RAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLG-PTSPTRPVEAS 104
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHD------RIVAEDSLADDEFGELTLITVRMLVP 148
SSS G L +SPAQ+AL V D R+VA EF V LV
Sbjct: 105 SSSSGEPLQ------LSPAQEALVSVVDVGGVLHRVVARAP----EF-------VSCLVL 147
Query: 149 ADQIGC-VIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+ G +G+G ++ I +ET A++R+ L + P S E++++ G+ +RKA
Sbjct: 148 VEAAGLEALGRG--TLEAIASETNAELRVTSLAEGATP-SVHSPKEVIEITGDRTTIRKA 204
Query: 206 LVQIASRLH---ENPSRSQHLLLSSSSNIYQSSGV-----------------YLSAPLVG 245
+V ++S L S + + S ++SS V ++ P +
Sbjct: 205 IVALSSYLQGDLHACSLTTSVTTPSPMFPWKSSEVPEPNYGDLHSGVSTKCANINVPWID 264
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
+ + + + ++ S RL+C GG+IGK G IIK E+GASI V + +
Sbjct: 265 CPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCM 324
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERE--SGDPVITTRILVPSAQIGCLIG 363
+ +I IS E S +A L + R E+ ER G P + R+LVP +Q L+G
Sbjct: 325 ERVITISALESPGKHSKVQSAILCIFDRM-EEVERNLMFGKPECSARVLVPKSQFSSLVG 383
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
GGAII EM +T A I IL +VP A E ++QITG+L AL V+ +LR +
Sbjct: 384 LGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNHA 443
Query: 424 F 424
F
Sbjct: 444 F 444
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 52/309 (16%)
Query: 54 KIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPA 113
KIG +IGK G +K+LR ET ++I+I++ + ++R V I S +EG + + +
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
L + D ++ G L R+L+ Q G +IGK G I+NIR + A
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQGSPNL--TRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 174 IRILKDEHLPLC--ALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----------- 220
+R+L + LPLC A D L+Q++GE A V+ A+ +A+ L +NP +
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTNPEAKTA 689
Query: 221 ----------QHLLL--SSSSNIYQSS---------------------GVYLSAPLVGSY 247
Q +LL SS + +Y S GV AP + Y
Sbjct: 690 YFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQAPPL--Y 747
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG-DD 306
N +AR + S + P+ +GG+IGKGG I +R SGA+IKV+ S +
Sbjct: 748 ANPAARLPPMLPK-VSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVER 806
Query: 307 CIIFISTKE 315
I+F T+E
Sbjct: 807 TILFEGTQE 815
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-EFFEDPSPTITAALRL 330
IG VIGK G IK++R E+GA IK+ +D + IS+K E D S A L +
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 331 -----------QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
P + + + G P +T R+L+ +Q G LIG+ GA I +R ++ AS
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQ-GSPNLT-RLLIAGSQAGSLIGKAGANIKNIRGSSSAS 629
Query: 380 IRILTNENVP--KVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
+R+L ++ +P A E + +VQI+G + A+ V LR N
Sbjct: 630 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 674
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 106/186 (56%), Gaps = 16/186 (8%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIV 91
D+ + G E +V+R L P +K+G+IIG+ GE +K++ ETK+ I+I + PG ER V
Sbjct: 220 DDNKWPGWPGE-SVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV 278
Query: 92 TIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV----AEDSLADDEFGELTLITVRMLV 147
I + E +SPA D L RVH RI E S G + R+LV
Sbjct: 279 MISAKDE-------PDAPLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG--PTRLLV 329
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
P+ Q G +IGK G I++I+ +++ +RI+ E++P AL+ D ++++ GEP V++A+
Sbjct: 330 PSSQAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVE 387
Query: 208 QIASRL 213
I+S L
Sbjct: 388 LISSHL 393
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G +IG+ G IK++ +E+ A IK+ + + IS K+ + P
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + LR+ R ++ ++ ES P + TR+LVPS+Q G LIG+ GA I ++
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQ 349
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
++++ +RI+ ENVP VA D+ +V+I G A+ ++ LR +R
Sbjct: 350 DSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDR 400
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 106/212 (50%), Gaps = 39/212 (18%)
Query: 14 HFQSDAA-----TNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
HF+ A+ T GS+ P E + G D V+R + PL K+G+IIG+ GE VK+
Sbjct: 15 HFEDPASVTLPSTVAGSQEETPPGERKWPGWPG-DNVFRLIVPLHKVGAIIGRKGEFVKR 73
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+ ET+S I+I + VPG ERIV + + ED +SPA D L RVH R V E
Sbjct: 74 MCEETRSRIKILDGVPGTLERIVLVSAK-------EDPEATISPAMDGLLRVHRR-VTEG 125
Query: 129 SLADDEFGELT-----LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
S D E E L+ R+LV A Q G +IG + E LP
Sbjct: 126 SSGDGEPVEHIILPSGLVQSRLLVTATQAGSLIG--------------------RQEELP 165
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
LCAL+ D +++V GE V+KA+ + S L +
Sbjct: 166 LCALADDRMVEVQGEILKVQKAMELVVSHLRK 197
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 37/176 (21%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
RL+ P +G +IG+ G +K++ +E+ + IK+ + I+ +S K EDP T
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAK---EDPEAT 107
Query: 324 ITAA----LRLQPRCSEKTERESGDPV---------ITTRILVPSAQIGCLIGRGGAIIS 370
I+ A LR+ R +E + + G+PV + +R+LV + Q G LIGR
Sbjct: 108 ISPAMDGLLRVHRRVTEGSSGD-GEPVEHIILPSGLVQSRLLVTATQAGSLIGR------ 160
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
E +P A D+ MV++ G + A+ V LR +R
Sbjct: 161 --------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIV 91
DE + G E +V+R L P +K+G++IG+ GE +K++ E+++ I++ + PG +R V
Sbjct: 104 DEKKWPGWPGE-SVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAV 162
Query: 92 TIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV-AEDSLADD-EFGELTLITVRMLVPA 149
I + E PA D L RVH RI D +D + T+ R+LVPA
Sbjct: 163 MISAKDEPDAPL-------PPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPA 215
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
Q G +IGK G I++I+ ++ +RIL E +P ALS D ++++ GEP V KA+ I
Sbjct: 216 SQAGSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELI 273
Query: 210 ASRL 213
AS L
Sbjct: 274 ASHL 277
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E R++ PA +G VIG+ G IK++ +ES A IKV D + IS K+ + P
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 321 -SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ R ++ + ES P V TR+LVP++Q G LIG+ GA I ++
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 233
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITG-SLDVASSALSQVTLRLRANTFEREGALAA 432
A++ +RIL E+VP VA D+ +V+I G LDV A+ + LR +R
Sbjct: 234 DASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDV-HKAVELIASHLRKFLVDRS----- 285
Query: 433 HPPVLPYVPMSLDITDGSK 451
VLP M + + + +
Sbjct: 286 ---VLPLFEMQMKVHNAHR 301
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 144/309 (46%), Gaps = 52/309 (16%)
Query: 54 KIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPA 113
KIG +IGK G +K+LR ET ++I+I++ + ++R V I S +EG + + +
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
L + D ++ G L R+L+ Q G +IGK G I+NIR + A
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNL--TRLLIAGSQAGSLIGKAGANIKNIRGSSSAS 630
Query: 174 IRILKDEHLPLC--ALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS----------- 220
+R+L + LPLC A D L+Q++GE A V+ A+ +A+ L +NP +
Sbjct: 631 VRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPKETVPTTPEAKTA 690
Query: 221 ----------QHLLL--SSSSNIYQSS---------------------GVYLSAPLVGSY 247
Q +LL SS + +Y S GV AP + Y
Sbjct: 691 YFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGPAYAGGVLAQAPPL--Y 748
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG-DD 306
N +AR + S + P+ +GG+IGKGG I +R SGA+IKV+ S +
Sbjct: 749 ANPAARLPPMLPK-VSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATIKVNGSKESSVER 807
Query: 307 CIIFISTKE 315
I+F T+E
Sbjct: 808 TILFEGTQE 816
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL- 330
IG VIGK G IK++R E+GA IK+ +D + IS+K E S A L L
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKN--EGGSDRTCAELALL 570
Query: 331 -------------QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
P + + + G P +T R+L+ +Q G LIG+ GA I +R ++
Sbjct: 571 EVVTILLKDGDGATPSAAIGPQHQ-GSPNLT-RLLIAGSQAGSLIGKAGANIKNIRGSSS 628
Query: 378 ASIRILTNENVP--KVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
AS+R+L ++ +P A E + +VQI+G + A+ V LR N
Sbjct: 629 ASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 675
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 113/201 (56%), Gaps = 11/201 (5%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
A NG SKR P G +R LC +IG +IGK G IVKQL+S+T + IR+
Sbjct: 29 APNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRV 86
Query: 80 SETVPGCDERIVTIYSSSEGTN--LFEDSGEFV--SPAQDALFRVHDRIVAEDSLADDEF 135
++ D R++ + + + + S E V S AQ+A+ RV +RI+ E + D
Sbjct: 87 EDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERIL-EVAAVVDGV 145
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
+++ R+L Q+G VIGKGG+V++ IR E+ ++I++L E LP CA S DE+++
Sbjct: 146 PPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEH 205
Query: 196 AG----EPAVVRKALVQIASR 212
+G +P +VR +V ++ +
Sbjct: 206 SGSLERKPHLVRWKVVCLSKK 226
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 109/202 (53%), Gaps = 29/202 (14%)
Query: 230 NIYQSSGVYLSAPLVGSYG-NYSARRDEAS-------AREFSLRLVCPAGNIGGVIGKGG 281
+IY ++G + P+ +Y N S++R + A + RL+C A IGGVIGK G
Sbjct: 13 SIYTATG--MPDPIPMAYAPNGSSKRSKPPPPPIPVPAGHVAFRLLCHASRIGGVIGKSG 70
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFI--------------STKEFFEDPSPTITAA 327
I+KQ++ ++GA I+V+ S + D +I + S++E + S A
Sbjct: 71 VIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIALQGSSEEV--EASAAQEAV 128
Query: 328 LRLQPRCSEKTERESGDP---VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
LR+ R E G P V++ R+L ++Q+G +IG+GG ++ ++R + + I++LT
Sbjct: 129 LRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLT 188
Query: 385 NENVPKVAYEDEEMVQITGSLD 406
E +P A +EMV+ +GSL+
Sbjct: 189 AEKLPTCAASTDEMVEHSGSLE 210
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 102/201 (50%), Gaps = 34/201 (16%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
+T GS+ P E + G D V+R + PL K+G+IIG+ GE VK++ ET+S I+I
Sbjct: 26 STVAGSQEETPPGERKWPGWPG-DNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKI 84
Query: 80 SETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT 139
+ VPG ERIV + + ED +SPA D L RVH R V E S D E E
Sbjct: 85 LDGVPGTLERIVLVSAK-------EDPEATISPAMDGLLRVHRR-VTEGSSGDGEPVEHI 136
Query: 140 -----LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
L+ R+LV A Q G +IG + E LPLCAL+ D +++
Sbjct: 137 ILPSGLVQSRLLVTATQAGSLIG--------------------RQEELPLCALADDRMVE 176
Query: 195 VAGEPAVVRKALVQIASRLHE 215
V GE V+KA+ + S L +
Sbjct: 177 VQGEILKVQKAMELVVSHLRK 197
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 37/176 (21%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
RL+ P +G +IG+ G +K++ +E+ + IK+ + I+ +S K EDP T
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAK---EDPEAT 107
Query: 324 ITAA----LRLQPRCSEKTERESGDPV---------ITTRILVPSAQIGCLIGRGGAIIS 370
I+ A LR+ R +E + + G+PV + +R+LV + Q G LIGR
Sbjct: 108 ISPAMDGLLRVHRRVTEGSSGD-GEPVEHIILPSGLVQSRLLVTATQAGSLIGR------ 160
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
E +P A D+ MV++ G + A+ V LR +R
Sbjct: 161 --------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 159/353 (45%), Gaps = 42/353 (11%)
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+SPAQ+AL V D A + E IT +LV AD++ G+G V++ I
Sbjct: 103 LSPAQEALVAVIDTEGALCCAVEKEARGKARPGCITCLLLVDADRLEASTGRG--VMERI 160
Query: 167 RTETRAQIRILKDEH--LPLCALSFDELLQVAGEPAVVRKALVQIASRLH---------- 214
E A +R+ E P +E++++ G+ VRKALV ++S L
Sbjct: 161 ALEAGADVRVAMWEEGAQPPRGQPLEEVVEITGDRTAVRKALVALSSFLQGDLPIGNSTT 220
Query: 215 --------------ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
E P + S +S + V + G+ G+ ++ + +
Sbjct: 221 YVKKEGSILPWASSEVPGPNMGASCSEASTEFAQGSVAKTHCPEGNTGDAQSK----TLQ 276
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ S RL+ P GG+IGK G IIK I E+GA I V + A + +I I E +
Sbjct: 277 QVSFRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSE 336
Query: 321 SPTITAALRL------QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+ +AL L + + + E + R+LV Q GCL+G GG+II EM +
Sbjct: 337 YHIVQSALLLIFDRMMEMETNTHSTFEKASQFLV-RVLVLKNQFGCLVGLGGSIIKEMVN 395
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T A I+IL + +P A E +VQITG L +ALS V +LR + F E
Sbjct: 396 TTGARIQILDDTEIPACASTFELVVQITGELMNIRNALSLVFWKLRNHIFSNE 448
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R L P G +IGK G I+K + ET + I + V GC ER++TI + E
Sbjct: 280 FRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICA-------LES 332
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
Q AL + DR++ ++ F + + VR+LV +Q GC++G GG +I+
Sbjct: 333 PDSEYHIVQSALLLIFDRMMEMETNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKE 392
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+ T A+I+IL D +P CA +F+ ++Q+ GE +R AL + +L
Sbjct: 393 MVNTTGARIQILDDTEIPACASTFELVVQITGELMNIRNALSLVFWKL 440
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 108/190 (56%), Gaps = 14/190 (7%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R + D ++R + P ++IG +IGK G ++++R ETK+ I+I++ V +ER++ I S
Sbjct: 61 KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF----GELTLITVRMLVPADQ 151
+D+ V+ A+ AL ++ I+ ED + +E G + T+R+L+ Q
Sbjct: 121 --------KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQ 172
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
G +IG GQ I+ +R + A I IL LPLCA + D ++Q++G+ V KAL +I
Sbjct: 173 AGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEI 232
Query: 210 ASRLHENPSR 219
++L NP R
Sbjct: 233 GNQLRVNPPR 242
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 101/184 (54%), Gaps = 10/184 (5%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+ SA + +A A + R+V P+ IG VIGK G I+++R+E+ A+IK+ + A ++ +
Sbjct: 56 DISAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERV 115
Query: 309 IFISTKE---FFEDPSPTI--TAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGC 360
I IS+K+ D + AAL L+ S E + G + T R+L+ +Q G
Sbjct: 116 IIISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGS 175
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I ++R+++ ASI IL +P A+E + +VQI+G + AL ++ +
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQ 235
Query: 419 LRAN 422
LR N
Sbjct: 236 LRVN 239
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P K+G++IG+ G+ +K++ E+++ I++ E P ER V I + E
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT--VRMLVPADQIGCVIGKGG 160
PA D L RVH RI D+ T+ T R+LVPA Q G +IGK G
Sbjct: 166 L-------PPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQG 218
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ ++ +RI+ E++P AL+ D ++++ GEP KA+ IAS L
Sbjct: 219 ATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-EFFED 319
E R++ P +G VIG+ G IK++ +ES A IKV + + IS K E +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 320 PSPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ R ++ E E+ P TR+LVP++Q G LIG+ GA I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
A++ +RI+ ENVP VA D+ +V+I G + A+ + LR +R
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P K+G++IG+ G+ +K++ E+++ I++ E P ER V I + E
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT--VRMLVPADQIGCVIGKGG 160
PA D L RVH RI D+ T+ T R+LVPA Q G +IGK G
Sbjct: 166 L-------PPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQG 218
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ ++ +RI+ E++P AL+ D ++++ GEP KA+ IAS L
Sbjct: 219 ATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-EFFED 319
E R++ P +G VIG+ G IK++ +ES A IKV + + IS K E +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 320 PSPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ R ++ E E+ P TR+LVP++Q G LIG+ GA I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
A++ +RI+ ENVP VA D+ +V+I G + A+ + LR +R
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 96/173 (55%), Gaps = 11/173 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
++V+R L P K+G++IG+ G+ +K++ E+++ I++ E P ER V I + E
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT--VRMLVPADQIGCVIGKGG 160
PA D L RVH RI D+ T+ T R+LVPA Q G +IGK G
Sbjct: 166 L-------PPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQG 218
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I++I+ ++ +RI+ E++P AL+ D ++++ GEP KA+ IAS L
Sbjct: 219 ATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 9/173 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-EFFED 319
E R++ P +G VIG+ G IK++ +ES A IKV + + IS K E +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 320 PSPTITAALRLQPRCSEKTERESGDP----VIT--TRILVPSAQIGCLIGRGGAIISEMR 373
P + LR+ R ++ E E+ P V T TR+LVP++Q G LIG+ GA I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
A++ +RI+ ENVP VA D+ +V+I G + A+ + LR +R
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
TV+R L K+G+IIG+ GE V++L ETK+++R+ ER+V I++
Sbjct: 62 TVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAK------- 114
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E E + PA DAL RV+ IV +D L G + + R+L+P++Q +IG+ G +I
Sbjct: 115 EQPDEPIPPAMDALLRVYQNIVNDDGLG---MGSDSAVVTRILIPSEQALNLIGEQGSMI 171
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I ++ IR+L D +LP AL D ++++ G+P VRKAL +A L
Sbjct: 172 NLIEEASQTDIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHL 220
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 13/192 (6%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
R++ + +G +IG+ G ++++ +E+ AS++V + ++ I KE ++P P
Sbjct: 64 FRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPIPP 123
Query: 324 ITAALRLQPRCSEKTERESG-----DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
AL R + + G D + TRIL+PS Q LIG G++I+ + A++
Sbjct: 124 AMDALL---RVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQT 180
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
IR+L + N+P A +++ +V+I G AL V LR +R + P P
Sbjct: 181 DIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLRKYLVDR----SVIPLFDP 235
Query: 439 YVPMSLDITDGS 450
+VPM+ D S
Sbjct: 236 HVPMTTSHVDTS 247
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 105/178 (58%), Gaps = 14/178 (7%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
+D ++R + P ++IG +IGK G ++++R T++NI+I++ + +ER++ I S
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS------ 151
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADD----EFGELTLITVRMLVPADQIGCVIG 157
+D+ E V+ A+ AL ++ + I+ ED+ + D G + T+R+L+ Q G +IG
Sbjct: 152 --KDNDEMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIG 209
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQIASRL 213
GQ I+ +R + A I +L LPLCA + D ++Q++G+ + V KAL +I +L
Sbjct: 210 MSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQL 267
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 10/175 (5%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-- 314
A ++ R+V P+ IG VIGK G I++IR+ + A+IK+ + A ++ +I IS+K
Sbjct: 95 AKGQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDN 154
Query: 315 -EFFEDPSPTI--TAALRLQPRCS--EKTERESGDPVITT-RILVPSAQIGCLIGRGGAI 368
E D + A L L+ S + ++ +G T R+L+ +Q G LIG G
Sbjct: 155 DEMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQN 214
Query: 369 ISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLRLRA 421
I ++R+++ A I +L +P A+E + +VQ++G + AL ++ +LR+
Sbjct: 215 IEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQLRS 269
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 96/170 (56%), Gaps = 11/170 (6%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
TV+R L P +K+G+IIG GE V++L ET++ +RI E+ V I+
Sbjct: 55 TVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGR------- 107
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E E + PA DAL RV+ + + DSL + G +I R+L P++Q +IG+ G +I
Sbjct: 108 EQLDEPLPPAMDALLRVYQQTINNDSL---DVGPDNVIVRRILAPSEQAASLIGEHGVMI 164
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I ++ IR+L D+ LP AL D ++++ G PA V KAL +AS L
Sbjct: 165 NSIMEASQTDIRVLDDD-LPPVALEEDRVIEIWGSPAGVYKALELVASHL 213
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 15/187 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++ PA +G +IG G ++++ +E+ A +++ + + I +E ++P P
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 323 TITAALRLQPRCSEKTERESG-DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
+ A LR+ + + G D VI RIL PS Q LIG G +I+ + A++ IR
Sbjct: 117 AMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEASQTDIR 176
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP--- 438
+L ++++P VA E++ +++I GS AL V LR +R V+P
Sbjct: 177 VL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYLVDRS--------VIPLFD 227
Query: 439 -YVPMSL 444
YVPM +
Sbjct: 228 RYVPMPI 234
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D VYR + P+ K+GSIIG+ GE++K++ ET++ IRI + P +RIV I
Sbjct: 26 DNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGK------ 79
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLVPADQIGCVIGK 158
E+ +SPA DA+ RV R+ + D G +V++LV + Q +IGK
Sbjct: 80 -EEPEAALSPAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGK 138
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I++I+ T A +R+L +E P A S + ++++ GE + V KAL + +L +
Sbjct: 139 QGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRK 195
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 9/165 (5%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPT 323
RL+ P +G +IG+ G +IK++ E+ A I++ D I+ IS KE E SP
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 324 ITAALRLQPRCSEKTERES--------GDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ A LR+ R S + E+ G + ++LV S+Q LIG+ G+ I ++ +
Sbjct: 90 MDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQES 149
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T A++R+L E P A DE +V+I G AL V +LR
Sbjct: 150 TAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLR 194
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 139/290 (47%), Gaps = 38/290 (13%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R D V+R + KIG +IGK G + QLR +T + I+I++ V ++R++ I
Sbjct: 85 KRAARGRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIII-- 142
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE--DSLADDEFGELTL--ITVRMLVPADQ 151
SS+G E S A+ AL ++ I+ E +S A + G + +R+L+ Q
Sbjct: 143 SSKGE-----EEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQ 197
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALS--FDELLQVAGEPAVVRKALVQI 209
G +IG G+ I+ IR ++ A I+IL P+CA + D L+Q++GE + V KAL I
Sbjct: 198 AGSLIGASGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHI 257
Query: 210 ASRLHENPSRS----------------------QHLLLSSSSNIYQSSGVYLSAPLVGSY 247
L E+P R Q +L + S+ YL A +
Sbjct: 258 GVTLREHPPREVISTRPTYYAGLSPANGLMVLPQTVLPGYNMQTGNSNYSYLGAAGRAAG 317
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
G SA + + ++ + P+ GGVIGK G I QIR SGA +KV
Sbjct: 318 GTISA---AFALPKVTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKV 364
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 23/197 (11%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ A+R A R+ R+V + IG VIGK G I Q+R+++GA IK+ +D +I
Sbjct: 82 FRAKR-AARGRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVI 140
Query: 310 FISTK-EFFEDPSPTITAALRLQPRCSEKTERESGDPVITT--------RILVPSAQIGC 360
IS+K E E+ S A +++ E++ S + T R+L+ +Q G
Sbjct: 141 IISSKGEEEEETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGS 200
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVP--KVAYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I E+R+ + A+I+IL P A E + +VQI+G + AL + +
Sbjct: 201 LIGASGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVT 260
Query: 419 LRANTFEREGALAAHPP 435
LR HPP
Sbjct: 261 LR-----------EHPP 266
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 106/186 (56%), Gaps = 14/186 (7%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
+R + D ++R + P ++IG +IGK G ++++R ETK+ I+I++ V +ER++ I S
Sbjct: 61 KRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS 120
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF----GELTLITVRMLVPADQ 151
+D+ V+ A+ AL ++ I+ ED + +E G + T+R+L+ Q
Sbjct: 121 --------KDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQ 172
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQI 209
G +IG GQ I+ +R + A I IL LPLCA + D ++Q++G+ V KAL +I
Sbjct: 173 AGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEI 232
Query: 210 ASRLHE 215
++L +
Sbjct: 233 GNQLRK 238
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+ SA + +A A + R+V P+ IG VIGK G I+++R+E+ A+IK+ + A ++ +
Sbjct: 56 DVSAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERV 115
Query: 309 IFISTKE---FFEDPSPTI--TAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGC 360
I IS+K+ D + AAL L+ S E + G + T R+L+ +Q G
Sbjct: 116 IIISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGS 175
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKV--AYEDEEMVQITGSLDVASSALSQVTLR 418
LIG G I ++R+++ ASI IL +P A+E + +VQI+G + AL ++ +
Sbjct: 176 LIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQ 235
Query: 419 LRANTF 424
LR
Sbjct: 236 LRKTNL 241
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 131/288 (45%), Gaps = 67/288 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R-----------------------SQHLLLSSSSNIYQS------SGVYLSAPLVGSYGN 249
+ H L S+ + SG+ S+P V Y
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWG 231
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 L-----DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 274
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQV 162
D E + PAQDAL RVH I E S+ D + R+LV QIG +IGKGG
Sbjct: 11 DENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGNN 70
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
IQ +RTE+ AQI+I + + LP CA SFDEL+ ++G+ V+KAL +++ L+++P + Q
Sbjct: 71 IQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPPKEQ 129
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
R+LV ++QIG LIG+GG I +MR+ + A I+I + +P A+ +E+V I+G
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 408 ASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL 444
AL V+ L HPP +P SL
Sbjct: 110 VKKALYSVS-----------AFLYKHPPK-EQIPWSL 134
>gi|223945455|gb|ACN26811.1| unknown [Zea mays]
Length = 126
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 78/129 (60%), Gaps = 17/129 (13%)
Query: 398 MVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDN 457
MVQITG LDVA +AL Q+ RL+AN FEREG+L+A PPV+PY P+ ++D KY RD
Sbjct: 1 MVQITGGLDVARNALVQIATRLKANFFEREGSLSAFPPVIPYHPLPAGVSDEPKYLGRDT 60
Query: 458 QSRGRGNSYATG------NLPGRDSYGSYGGSLSGGGNAYGAYGDH---SSGRGLSGHR- 507
+ G Y++G +P DSY SYGGS + G YGAY + SS GLSGH
Sbjct: 61 KPVGH-YLYSSGFRTSDDTIP-SDSYASYGGSQA-PGRGYGAYSGYSARSSNSGLSGHSS 117
Query: 508 ----KNHGY 512
K HGY
Sbjct: 118 LHYGKRHGY 126
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 74/119 (62%), Gaps = 2/119 (1%)
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQV 162
D E + PAQDAL RVH I E S+ D + R+LV QIG +IGKGG
Sbjct: 11 DENEPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGKGGNN 70
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
IQ +RTE+ AQI+I + + LP CA SFDEL+ ++G+ V+KAL +++ L+++P + Q
Sbjct: 71 IQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPPKEQ 129
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
R+LV ++QIG LIG+GG I +MR+ + A I+I + +P A+ +E+V I+G
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 408 ASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSL 444
AL V+ L HPP +P SL
Sbjct: 110 VKKALYSVS-----------AFLYKHPPK-EQIPWSL 134
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 131/261 (50%), Gaps = 36/261 (13%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P + + + QI + E +
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKQICVVMLEAYT 171
Query: 219 -RSQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
+ Q+ + + ++Q + P+ +SA D ASA+ S L P IG +
Sbjct: 172 IQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLD-ASAQTTSHELTIPNDLIGCI 230
Query: 277 IGKGGGIIKQIRQESGASIKV 297
IG+ G I +IRQ SGA IK+
Sbjct: 231 IGRQGAKINEIRQMSGAQIKI 251
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 75/316 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDIS--------------------------SSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSII 156
Query: 307 ------CIIFISTKEF---FEDPSPTITA--ALRLQPRCSEKTERESG--------DPVI 347
C++ + + P P +T L +Q T +G
Sbjct: 157 ECVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTT 216
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
+ + +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS
Sbjct: 217 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAAS 271
Query: 408 ASSALSQVTLRLRANT 423
S A + +RL + T
Sbjct: 272 ISLAQYLINVRLSSET 287
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 59/76 (77%)
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
VITT++L+PS Q GCL+G+GGAIISEMR TRA+IRIL E++P A + +EMVQI G +
Sbjct: 2 VITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDI 61
Query: 406 DVASSALSQVTLRLRA 421
A +AL QVT RLR+
Sbjct: 62 RAARAALVQVTSRLRS 77
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
+IT ++L+P++Q GC++GKGG +I +R +TRA IRIL E LP CAL DE++Q+ G+
Sbjct: 2 VITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDI 61
Query: 200 AVVRKALVQIASRLH 214
R ALVQ+ SRL
Sbjct: 62 RAARAALVQVTSRLR 76
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 12/80 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSEGTNLFE 104
+ L P + G ++GKGG I+ ++R +T++NIRI E +P C S E +
Sbjct: 6 KLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCA------LDSDEMVQIVG 59
Query: 105 DSGEFVSPAQDALFRVHDRI 124
D + A+ AL +V R+
Sbjct: 60 D----IRAARAALVQVTSRL 75
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LC ++G+IIGK G ++K L+ T + IRI + P +R++ + + S +
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPS-----VTE 81
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
GE S AQ+AL +V DR++ D A E G+L +++ R+L Q+G VIGK G+V++
Sbjct: 82 DGEL-STAQEALLKVFDRVL--DVAAGTEVGDL-VVSCRLLAETSQVGAVIGKAGKVVEK 137
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVA 196
IR +T +IR+L +E LP DE+++V+
Sbjct: 138 IRMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
++ N R + RL+C A +G +IGK G +IK +++ +GA I++ + +
Sbjct: 9 NHSNAHVNRSRHYTTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSP 68
Query: 306 DCIIFISTKEFFED--PSPTITAALRLQPRCSEKTE-RESGDPVITTRILVPSAQIGCLI 362
D +I +S ED S A L++ R + E GD V++ R+L ++Q+G +I
Sbjct: 69 DRVILVSAPSVTEDGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVI 128
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G+ G ++ ++R T IR+L NE +P +E+V+++
Sbjct: 129 GKAGKVVEKIRMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 106/191 (55%), Gaps = 12/191 (6%)
Query: 30 PGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
P +E++ G D V+R + P+ K+GSIIG+ GE++K++ ET++ IR+ + G +
Sbjct: 63 PAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSD 122
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLADDEFGE--LTLITVR 144
RIV I E+ +SPA DA+ RV R+ ++E +G + ++R
Sbjct: 123 RIVLISGR-------EEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIR 175
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
+LV + Q +IGK G +I++I+ T A +R+L + +P A + + ++++ GE V+K
Sbjct: 176 LLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQK 235
Query: 205 ALVQIASRLHE 215
AL + L +
Sbjct: 236 ALEAVVGHLRK 246
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK++ +E+ A I+V D I+ IS +E E P SP
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 323 TITAALRLQPRCSEKTERE--------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+ A +R+ R + +E E +G + R+LV S Q LIG+ G++I ++
Sbjct: 140 AMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQE 199
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+T AS+R+L+ + VP A DE +V++ G AL V LR
Sbjct: 200 STGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLR 245
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 71/305 (23%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGKGGE +K+ R ++ + I IS++ C ERIVT+ S+E N
Sbjct: 28 KEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGSTEAIN----------- 74
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
+A + + E+ ++++ T +T+R++VPA Q G +IGKGG I+ IR
Sbjct: 75 --NAFEMITKKF--EEDVSNNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIREN 130
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
T A +++ D + S + + ++G P + K + QI + E+P + +
Sbjct: 131 TGASVQVAGD----MLHQSTERAVTISGTPEAITKCVYQICCVMLESPPKGATIPYRP-- 184
Query: 230 NIYQSSGVYLSAPLVGSYGNY--------------------------------------- 250
+ + + P +GNY
Sbjct: 185 ---KPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQTPFTPTALNMGYGVA 241
Query: 251 ---SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
SA A+ + + ++ P IG VIG+GG I +IRQ SGA+IK+ +S +D
Sbjct: 242 NAASAGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDR 301
Query: 308 IIFIS 312
+ IS
Sbjct: 302 SVTIS 306
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 28/172 (16%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE---------- 303
++ A ++RL+ +G +IGKGG IK+ R++SGA I + DSS AE
Sbjct: 12 NDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTE 71
Query: 304 GDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
+ + TK+F ED S + + P +T R++VP++Q G LIG
Sbjct: 72 AINNAFEMITKKFEEDVS-------------NNMANSSTPKPPVTLRLVVPASQCGSLIG 118
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+GG+ I E+R T AS+++ + + E V I+G+ + + + Q+
Sbjct: 119 KGGSKIKEIRENTGASVQVAGD----MLHQSTERAVTISGTPEAITKCVYQI 166
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 40/168 (23%)
Query: 130 LADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF 189
+A+D G +T+R+++ ++G +IGKGG+ I+ R ++ A+I I CA
Sbjct: 10 MAND--GPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSS----CA--- 60
Query: 190 DELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGN 249
+ ++ V G + A I + E+ S+N+ SS
Sbjct: 61 ERIVTVTGSTEAINNAFEMITKKFEED----------VSNNMANSS-------------- 96
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GAS++V
Sbjct: 97 -------TPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTGASVQV 137
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 57/191 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-----------ETVPGCDERI----- 90
R + P + GS+IGKGG +K++R T ++++++ T+ G E I
Sbjct: 105 RLVVPASQCGSLIGKGGSKIKEIRENTGASVQVAGDMLHQSTERAVTISGTPEAITKCVY 164
Query: 91 ----VTIYSSSEGTNL---------------FEDSGEFVSPAQDALFRVHDRI------- 124
V + S +G + + G + P D + H +
Sbjct: 165 QICCVMLESPPKGATIPYRPKPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLP 224
Query: 125 ---------------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
VA + A + T +++P D IGCVIG+GG I IR
Sbjct: 225 GQTPFTPTALNMGYGVANAASAGTQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIRQI 284
Query: 170 TRAQIRILKDE 180
+ A I+I +
Sbjct: 285 SGATIKIANSQ 295
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
Y + P IG +IG+GG + ++R + + I+I+ + G ++R VTI + E NL
Sbjct: 258 YEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAINL 314
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 134/286 (46%), Gaps = 61/286 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN--YS 251
+ S ++ + Y G Y + P S+GN +S
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFS 231
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 AGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDIS--------------------------SSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 30 PGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
P E+R G V+R + P+ K+GSIIG+ GE++K+ ETK+ IR+ + G +
Sbjct: 31 PDAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSD 90
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLITVRMLV 147
RIV I ED +SPA DA+ RV R+ + A ++ + +VR+LV
Sbjct: 91 RIVLISGK-------EDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLV 143
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
+ Q +IGK G +I++I+ T A +R+L + +P A + + ++++ GE V KAL
Sbjct: 144 ASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALE 203
Query: 208 QIASRLHE 215
+ L +
Sbjct: 204 AVVGHLRK 211
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK+ +E+ A I+V D I+ IS KE E P SP
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 323 TITAALRLQPRCSEKTE-----RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ A +R+ R S +E + S + R+LV S Q LIG+ G++I ++ T
Sbjct: 108 AMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
AS+R+L+ + VP A DE +V++ G AL V LR
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 61/286 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVYL-----------------------SAPLVGSYGNYS 251
+ + SSS I+ Y P+ +S
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 AGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCPERIITLAGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 131/278 (47%), Gaps = 45/278 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T +F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TAIFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ ++ + S+++ +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 SMIIEKLEEDI---------SSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR------- 219
R T AQ+++ D + S + + +AG P + + + QI + E+P +
Sbjct: 124 RESTGAQVQVAGD----MLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYR 179
Query: 220 -------------------SQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
QH + + ++Q + PL S ++A D ASA
Sbjct: 180 PKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMD-ASA 238
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 239 QTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 132/346 (38%), Gaps = 118/346 (34%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S S+ S P V
Sbjct: 67 AIFKAFSMIIEKLEEDISSS------------MSNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD----------SSGAEGDDCIIF 310
+LR+V PA G +IGKGG IK+IR+ +GA ++V + G I
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSII 156
Query: 311 ISTKE----FFEDPSPTITAALRLQPRCSEKTERESGDPVI------------------- 347
K+ E P +T R +P SG PVI
Sbjct: 157 ECVKQICVVMLESPPKGVTIPYRPKP---------SGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 348 TTRI-----------LVPSAQ-----------------------IGCLIGRGGAIISEMR 373
T++ L PS+Q IGC+IGR GA I+E+R
Sbjct: 208 LTKLHQLAMQQSPFPLAPSSQGFTAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ A I+I V + V ITGS S A + RL
Sbjct: 268 QMSGAQIKIAN-----PVEGSSDRQVTITGSPASISLAEYLINARL 308
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 165/383 (43%), Gaps = 58/383 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK- 204
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
++ Y+ S P++ + G A AS SL L PA I G
Sbjct: 205 ------GATIPYRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQY 256
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 257 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 306
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I A E
Sbjct: 307 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------ATEGSS 359
Query: 398 MVQITGSLDVASSALSQVTLRLR 420
QIT + A+ +L+Q + R
Sbjct: 360 ERQITITGTPANISLAQYLINAR 382
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 17 SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
SD+A + S P D+ G D V+R + P+ K+GSIIG+ G+++K++ ET++
Sbjct: 56 SDSAAHEPSNHTGPSDKKWPGWPG--DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG 136
IR+ + G +R+V I G E +SPA DA+ RV R+ D+
Sbjct: 114 IRVLDGAVGTPDRVVLI----SGKEELESP---LSPAMDAVIRVFKRVSGLSENEDE--A 164
Query: 137 ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVA 196
+ + ++R+LV + Q +IGK G +I++I+ T A +R+L + +P A + + ++++
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQ 224
Query: 197 GEPAVVRKALVQIASRLHE 215
GE V KAL + L +
Sbjct: 225 GESLKVLKALEGVVGHLRK 243
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK++ +E+ A I+V D ++ IS KE E P SP
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 323 TITAALRLQPRCS--EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
+ A +R+ R S + E E+ + R+LV S Q LIG+ G++I ++ +T AS+
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
R+L+ + +P A DE MV++ G AL V LR
Sbjct: 203 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLR 242
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 66/288 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R-----------------------SQHLLLSSSSNIYQS------SGVYLSAPLVGSYGN 249
+ H L S+ + SG+ S+P V
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV---KG 228
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 229 YWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK- 204
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
++ Y+ S P++ + G A AS SL L PA I G
Sbjct: 205 ------GATIPYRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQY 256
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 257 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 306
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 307 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK- 204
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
++ Y+ S P++ + G A AS SL L PA I G
Sbjct: 205 ------GATIPYRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQY 256
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 257 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 306
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 307 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 61/286 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVYL-----------------------SAPLVGSYGNYS 251
+ + SSS I+ Y P+ +S
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 AGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDIS--------------------------SSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L TK+ +RI E G ERIV +
Sbjct: 39 DSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGK------ 92
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELT--LITVRMLVPADQIGCVIGKG 159
ED G +SPA DAL RV R++ D A+ T + R+LVP Q +IGK
Sbjct: 93 -EDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQ 151
Query: 160 GQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ DEH P + ++++ G+ V KAL +++ L +
Sbjct: 152 GATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRK 209
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RLV P +G +IG+ G +IK++ + + A +++ + I+ +S KE DP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKE---DPGLE 98
Query: 321 -SPTITAALRLQPR-------CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
SP + A +R+ R +E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 99 LSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 158
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 159 QESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 208
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 100/188 (53%), Gaps = 17/188 (9%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC-DERIVTIYSSSEGTNLF 103
+YR LCP + GS+IGK GE VKQL+ ++ + I++ V ER++ I E ++
Sbjct: 266 LYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI----EAQDV- 320
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDS------LADDEFGELTLITVRMLVPADQIGCVIG 157
D +P+Q AL R+ + IV + A++ G I +R+L+P+ QI VIG
Sbjct: 321 -DDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGH---IVIRLLLPSSQIRNVIG 376
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV-VRKALVQIASRLHEN 216
+ G VI+ IR + + +R+L P CA DE+LQ++ E V AL I ++L +
Sbjct: 377 RFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLRLD 436
Query: 217 PSRSQHLL 224
P H L
Sbjct: 437 PPVRAHEL 444
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 19/186 (10%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----DSSGAEGD 305
Y + + R RL+CP G VIGK G +KQ++++SGA IKV DS+ AE
Sbjct: 253 YRMPENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAER- 311
Query: 306 DCIIFISTKEFFEDPS---PTITAALRLQPRCSEKTER-------ESGDPVITTRILVPS 355
+I I ++ +DP+ P+ A LR+ ER E + I R+L+PS
Sbjct: 312 --VIAIEAQDV-DDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPS 368
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG-SLDVASSALSQ 414
+QI +IGR G +I +R + + +R+L + P+ A ++E++QI+ S++ +SAL+
Sbjct: 369 SQIRNVIGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAM 428
Query: 415 VTLRLR 420
+T +LR
Sbjct: 429 ITTQLR 434
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L TK+ +RI E G ERIV +
Sbjct: 39 DSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGK------ 92
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELT--LITVRMLVPADQIGCVIGKG 159
ED G +SPA DAL RV R++ D A+ T + R+LVP Q +IGK
Sbjct: 93 -EDPGLELSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQ 151
Query: 160 GQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ DEH P + ++++ G+ V KAL +++ L +
Sbjct: 152 GATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRK 209
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RLV P +G +IG+ G +IK++ + + A +++ + I+ +S KE DP
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKE---DPGLE 98
Query: 321 -SPTITAALRLQPRC-------SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
SP + A +R+ R +E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 99 LSPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 158
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 159 QESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 208
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 44/271 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 59 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 107
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 108 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 159
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 160 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 215
Query: 221 QHL----------LLSSSSNIYQSSGVY-LSAPLVGSYG---NYSARRDEASAREFSLRL 266
+ ++ + Y G Y + P V + +S+ D AS + L
Sbjct: 216 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSSCLD-ASPPASTHEL 274
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P IG +IG+ G I +IRQ SGA IK+
Sbjct: 275 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 305
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 127/328 (38%), Gaps = 95/328 (28%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 56 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 108
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 109 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 138
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 139 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 198
Query: 307 ------CIIFI----------------STKEFFED------------PSPTITAALRLQP 332
C++ + ST F P P ++ P
Sbjct: 199 QCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSFHFVCLP 258
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
S ++ P T + +P+ IGC+IGR G I+E+R + A I+I A
Sbjct: 259 FSS---CLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------A 308
Query: 393 YEDEEMVQITGSLDVASSALSQVTLRLR 420
E QIT + A+ +L+Q + R
Sbjct: 309 TEGSSERQITITGTPANISLAQYLINAR 336
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 224 LLSSSSNIYQSSGVYLSAPL-VGSYGNYS-------ARRDEASARE------FSLRLVCP 269
++SS + + ++ + L +G+ G +S R+ E+ E ++RL+
Sbjct: 4 VISSCAFFFPGDTIWAPSILPLGTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMH 63
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALR 329
+G +IGK G +K++R+ESGA I + I T F+ + I
Sbjct: 64 GKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA-MIAYKFE 122
Query: 330 LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP 389
S + P +T R++VP++Q G LIG+GG+ I E+R +T A +++ + +P
Sbjct: 123 EDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP 181
Query: 390 KVAYEDEEMVQITGSLDVASSALSQVTLRL 419
E V I+G+ D + Q+ + +
Sbjct: 182 N---STERAVTISGTPDAIIQCVKQICVVM 208
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
+ Y+ S P++ + G A AS SL L PA I G
Sbjct: 174 ATIP-------YRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQY 224
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + + G T F + ++ Q +
Sbjct: 225 AIPHPDLTKLHQLAMQQTPLPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 274
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 275 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 108/197 (54%), Gaps = 11/197 (5%)
Query: 22 NGGSKRRNPGDETEQR-GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
NG SKR P +Q I + +R LC +IG +IGK G ++K L+ T + IRI
Sbjct: 25 NGSSKRAKPSKPPQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIE 84
Query: 81 ETVPGCDERIVTIYSSS--EGTNLFED---SGEF--VSPAQDALFRVHDRIV-AEDSLAD 132
++ +R++ + +S +G + GE VS AQ+AL RV DRI+ +
Sbjct: 85 DSPNESPDRVIMVIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEG 144
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
E G+ T ++ R++ + Q G VIGKGG+V++ I+ +T +I + KD +LP C S DE+
Sbjct: 145 IELGDRT-VSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWVCKD-NLPACISSPDEV 202
Query: 193 LQVAGEPAVVRKALVQI 209
++ + ++ A+ +I
Sbjct: 203 IECSASRSMFGSAVTRI 219
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
A + RL+C + IGGVIGK G +IK ++ +GA I+++ S E D +I + +
Sbjct: 45 AGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNID 104
Query: 319 ---------------DPSPTITAALRLQPRCSEKTER----ESGDPVITTRILVPSAQIG 359
+ S A LR+ R E E GD ++ R++ SAQ G
Sbjct: 105 GKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAG 164
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
+IG+GG ++ +++ T I + +N+P +E+++ + S + SA++++
Sbjct: 165 SVIGKGGKVVEKIKKDTGCKIWV-CKDNLPACISSPDEVIECSASRSMFGSAVTRIVF 221
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+ R+L + +IG VIGK G VI+N++ T A+IRI E P S D ++ V G
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRI---EDSP--NESPDRVIMVIGASN 102
Query: 201 VVRKALVQIASRLHE--NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+ K +V+ S E S++Q LL I + ++A + G E
Sbjct: 103 IDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILE-----VAAEMEGI---------ELG 148
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R S RLV + G VIGKGG ++++I++++G I V
Sbjct: 149 DRTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCKIWV 187
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 135/324 (41%), Gaps = 78/324 (24%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
NP D G + R L +++GSIIGK GE VK++R E+ + I ISE C E
Sbjct: 2 NPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPE 59
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLIT 142
RIVTI + DA+F+ I ED S+ + +T
Sbjct: 60 RIVTITGPT-----------------DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVT 102
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+R++VPA Q G +IGKGG I+ IR T AQ+++ D + S + + ++G P +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAI 158
Query: 203 RKALVQIASRLHENPSRSQHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+ + QI + E+P + + +S+ I + G + ++ S GN++ A
Sbjct: 159 IQCVKQICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPA 218
Query: 260 REFSLR----------------------------------------------LVCPAGNI 273
F+++ L P I
Sbjct: 219 PAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLI 278
Query: 274 GGVIGKGGGIIKQIRQESGASIKV 297
G +IG+ G I +IRQ SGA IK+
Sbjct: 279 GCIIGRQGSKINEIRQMSGAQIKI 302
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R++VP++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 135/324 (41%), Gaps = 78/324 (24%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
NP D G + R L +++GSIIGK GE VK++R E+ + I ISE C E
Sbjct: 2 NPKDSKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPE 59
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLIT 142
RIVTI + DA+F+ I ED S+ + +T
Sbjct: 60 RIVTITGPT-----------------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVT 102
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+R++VPA Q G +IGKGG I+ IR T AQ+++ D + S + + ++G P +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAI 158
Query: 203 RKALVQIASRLHENPSRSQHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+ + QI + E+P + + +S+ I + G + ++ S GN++ A
Sbjct: 159 IQCVKQICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPA 218
Query: 260 REFSLR----------------------------------------------LVCPAGNI 273
F+++ L P I
Sbjct: 219 PAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLI 278
Query: 274 GGVIGKGGGIIKQIRQESGASIKV 297
G +IG+ G I +IRQ SGA IK+
Sbjct: 279 GCIIGRQGSKINEIRQMSGAQIKI 302
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R++VP++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 150/345 (43%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
+ Y+ S P++ + G A AS SL L PA I G
Sbjct: 174 ATIP-------YRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQY 224
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 225 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 274
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 275 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 45/278 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T++F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ ++ + +S+ + +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 SMIIEKLEEDI---------SNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR------- 219
R AQ+++ D + S + + VAG P + + + QI + E+P +
Sbjct: 124 RESAGAQVQVAGD----MLPNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYR 179
Query: 220 -------------------SQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
QH + + ++Q + P+ S + A D ASA
Sbjct: 180 PKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQGFQAGMD-ASA 238
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 239 QTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 SIFKAFSMIIEKLEEDISNS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
++RLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R + A ++
Sbjct: 74 -MIIEKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 60/286 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFSMII--DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAPLVGSYGNYSARRD------------ 255
+ S ++ + Y G Y + P + + ++
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGF 231
Query: 256 ----EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 SGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 277
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A +S
Sbjct: 67 AIFKAFSMIIDKLEEDISSSMT--------------------------NSTA----SSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 96/176 (54%), Gaps = 10/176 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P+ K+GSIIG+ GE++K++ ET+S IR+ + G +RIV +
Sbjct: 52 DCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGK------ 105
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA---EDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
ED +SPA DA+ R+ R+ D+ + L ++R+LV + Q +IGK
Sbjct: 106 -EDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQ 164
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G +I++I+ T A +R+L + + A + + ++++ GE V KAL + L +
Sbjct: 165 GSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRK 220
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RL+ P G +G +IG+ G +IK++ +E+ + I+V + D I+ +S KE DP
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKE---DPEAA 111
Query: 321 -SPTITAALRLQPRCS-------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
SP + A +R+ R S E E +G + R+LV S Q LIG+ G++I +
Sbjct: 112 LSPAMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSI 171
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ T AS+R+L+ + V A +E +V+I G AL V LR
Sbjct: 172 QENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLR 219
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 84/174 (48%), Gaps = 36/174 (20%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R++VP ++G +IG+ G++I+ + ETR++IR+L PL + D ++ V+G+
Sbjct: 56 RLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLD---APLG--TPDRIVLVSGK----- 105
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA-REF 262
E+P + + + I++ V + A E++A F
Sbjct: 106 -----------EDPEAALSPAMDAVVRIFKR---------VSGFSETDAENQESAAGLAF 145
Query: 263 S-LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
S +RL+ + +IGK G +IK I++ + AS++V S GD+ + + E
Sbjct: 146 SSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLS----GDEVQFYATANE 195
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 178/397 (44%), Gaps = 55/397 (13%)
Query: 37 RGIGSEDT--VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIY 94
R G ED +Y + PLR+ + + + ++ + S + + P R V
Sbjct: 46 RAFGDEDAMRLYAVVAPLRRHTAGLHVRVDALEGYPEDAASRVAVVLG-PTSPTRPVEAS 104
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHD------RIVAEDSLADDEFGELTLITVRMLVP 148
SSS G L +SPAQ+AL V D R+VA EF V LV
Sbjct: 105 SSSSGEPLQ------LSPAQEALVSVVDVGGVLHRVVARAP----EF-------VSCLVL 147
Query: 149 ADQIGC-VIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+ G +G+G ++ I +ET A++R+ L + P S E++++ G+ +RKA
Sbjct: 148 VEAAGLEALGRG--TLEAIASETNAELRVTSLAEGATP-SVHSPKEVIEITGDRTTIRKA 204
Query: 206 LVQIASRLH---ENPSRSQHLLLSSSSNIYQSSGV-----------------YLSAPLVG 245
+V ++S L S + + S ++SS V ++ P +
Sbjct: 205 IVALSSYLQGDLHACSLTTSVTTPSPMFPWKSSEVPEPNYGDLHSGVSTKCANINVPWID 264
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
+ + + + ++ S RL+C GG+IGK G IIK E+GASI V + +
Sbjct: 265 CPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCM 324
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERE--SGDPVITTRILVPSAQIGCLIG 363
+ +I IS E S +A L + R E+ ER G P + R+LVP +Q L+G
Sbjct: 325 ERVITISALESPGKHSKVQSAILCIFDR-MEEVERNLMFGKPECSARVLVPKSQFSSLVG 383
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
GGAII EM +T A I IL +VP A E ++Q
Sbjct: 384 LGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQ 420
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 96/170 (56%), Gaps = 11/170 (6%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
+V+R L P +K+G IIG GE V++L ET++ +RI E+ V I+
Sbjct: 55 SVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGR------- 107
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E E + PA DAL RV+ + + ++SL + G +I R+LVP++Q +IG+ G +I
Sbjct: 108 EQPEEPLPPAMDALLRVYQQTINDESL---DVGSDGVIVRRILVPSEQAESLIGEHGVMI 164
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I ++ IR+L D LP AL D ++++ G PA V KAL +AS L
Sbjct: 165 NSIMEASQTDIRVL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHL 213
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
R++ PA +G +IG G ++++ +E+ A +++ + + I +E E+P P
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 323 TITAALRL-QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
+ A LR+ Q ++++ D VI RILVPS Q LIG G +I+ + A++ IR
Sbjct: 117 AMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEASQTDIR 176
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+L + ++P VA E++ +V+I G AL V LR +R
Sbjct: 177 VL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHLRKYLVDR 220
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +RI E G ERIV +
Sbjct: 49 DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGK------ 102
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELT--LITVRMLVPADQIGCVIGKG 159
ED G + PA DAL RV R++ D A+ T + R+LVP Q +IGK
Sbjct: 103 -EDPGLELPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQ 161
Query: 160 GQVIQNIRTETRAQIRILK--DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ + P + ++++ G+ V KAL +++ L +
Sbjct: 162 GATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRK 219
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
RLV P +G +IG+ G +IK++ +E+ A +++ + I+ +S KE DP
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE---DPGLE 108
Query: 321 -SPTITAALRLQPRC-------SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ R +E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 109 LPPAMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAI 168
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +++I G + AL V+ LR
Sbjct: 169 QESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLR 218
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 51/281 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T +F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TAIFK-- 70
Query: 107 GEFVSPAQDALFRVHDRIVAED---SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
A + D++ ED S+++ +T+R++VPA Q G +IGKGG I
Sbjct: 71 ---------AFSMIIDKL-EEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKI 120
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR---- 219
+ IR T AQ+++ D + S + + +AG P + + + QI + E+P +
Sbjct: 121 KEIRESTGAQVQVAGD----MLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTI 176
Query: 220 ----------------------SQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDE 256
QH + + ++Q + PL S ++A D
Sbjct: 177 PYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMD- 235
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A+ + S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 236 ATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S S+ S P V
Sbjct: 67 AIFKAFSMIIDKLEEDISSS------------MSNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 67/355 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--------- 68
Query: 107 GEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I ED S+ + +T+R++VPA Q G +IGKGG
Sbjct: 69 --------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGG 120
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 121 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 176
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ +S I + G + ++ S GN++ A F++
Sbjct: 177 ATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAI------------- 223
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
Q A D S A + ++F+ F + T+T +L + +
Sbjct: 224 -----------QGQYAIPHPDVSSAHANYTLLFLFIC-FGQHLLSTLTKLHQLAMQHTPF 271
Query: 338 TE----------RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T ++ P + + +P+ IGC+IGR G+ I+E+R + A I+I
Sbjct: 272 TPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 326
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R++VP++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS----CP---ERIVTITGPTD 69
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ N ++ S P V
Sbjct: 70 AIFKAFSMIALKFEED------------INASMTNSTVTSKPPV---------------- 101
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 --TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 136
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 152/345 (44%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVI 277
+ Y+ S P++ + G A AS SL L PA I G
Sbjct: 174 ATIP-------YRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQY 224
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G +T F + P + ++ Q +
Sbjct: 225 AIPHPDLTKLHQLAMQQTPFPPLGQ---------TTPAFPGEKLP-LHSSEEAQNLMGQS 274
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 275 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 133/281 (47%), Gaps = 51/281 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T +F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TAIFK-- 70
Query: 107 GEFVSPAQDALFRVHDRIVAED---SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
A + D++ ED S+++ +T+R++VPA Q G +IGKGG I
Sbjct: 71 ---------AFSMIIDKL-EEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKI 120
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR---- 219
+ IR T AQ+++ D + S + + +AG P + + + QI + E+P +
Sbjct: 121 KEIRESTGAQVQVAGD----MLPNSTERAITIAGTPLSIIECVKQICVVMLESPPKGVTI 176
Query: 220 ----------------------SQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDE 256
QH + + ++Q + PL S ++A D
Sbjct: 177 PYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMD- 235
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A+ + S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 236 ATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 133/346 (38%), Gaps = 118/346 (34%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S S+ S P V
Sbjct: 67 AIFKAFSMIIDKLEEDISSS------------MSNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD----------SSGAEGDDCIIF 310
+LR+V PA G +IGKGG IK+IR+ +GA ++V + G I
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSII 156
Query: 311 ISTKE----FFEDPSPTITAALRLQPRCSEKTERESGDPVI------------------- 347
K+ E P +T R +P SG PVI
Sbjct: 157 ECVKQICVVMLESPPKGVTIPYRPKP---------SGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 348 TTRI-----------LVPSAQ-----------------------IGCLIGRGGAIISEMR 373
T++ L PS+Q IGC+IGR GA I+E+R
Sbjct: 208 LTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIR 267
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ A I+I V ++ V ITGS S A + RL
Sbjct: 268 QMSGAQIKIAN-----PVEGSNDRQVTITGSPASISLAEYLINARL 308
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 129/278 (46%), Gaps = 45/278 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T++F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ ++ + S+ + +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 SMIIEKLEEDI---------STSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR------- 219
R AQ+++ D + S + + +AG P + + + QI + E+P +
Sbjct: 124 RESAGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYR 179
Query: 220 -------------------SQHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
QH + + ++Q + P+ S + A D ASA
Sbjct: 180 PKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAHSNQGFQAGMD-ASA 238
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 239 QTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R + A ++
Sbjct: 74 -MIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 SIFKAFSMIIEKLEEDISTS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
++RLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TIRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV 133
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +RI E G ERIV +
Sbjct: 45 DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGK------ 98
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELT--LITVRMLVPADQIGCVIGKG 159
ED + PA DAL RV R+ D A+ T + R+LVP Q +IGK
Sbjct: 99 -EDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQ 157
Query: 160 GQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ DEH P + ++++ G+ V KAL +++ L +
Sbjct: 158 GATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRK 215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS-- 321
RLV P +G +IG+ G +IK++ +E+ A +++ + I+ +S KE DP
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE---DPDLE 104
Query: 322 --PTITAALRLQPRCS-------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ R + E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 105 LPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAI 164
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 165 QESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +RI E G ERIV +
Sbjct: 45 DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGK------ 98
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELT--LITVRMLVPADQIGCVIGKG 159
ED + PA DAL RV R+ D A+ T + R+LVP Q +IGK
Sbjct: 99 -EDPDLELPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQ 157
Query: 160 GQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ DEH P + ++++ G+ V KAL +++ L +
Sbjct: 158 GATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRK 215
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS-- 321
RLV P +G +IG+ G +IK++ +E+ A +++ + I+ +S KE DP
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE---DPDLE 104
Query: 322 --PTITAALRLQPRCS-------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ R + E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 105 LPPAMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAI 164
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 165 QESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + PL K+GSIIG+ GE+VK++ ET++ IRI E G +RIV I
Sbjct: 10 DNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGK------ 63
Query: 103 FEDSGEFVSPAQDALFRVHDRIV------AEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E+ SPA DA+ RV R+ +++ + ++R+LV + Q +I
Sbjct: 64 -EEPEAPQSPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLI 122
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
GK G +I++I+ T A + ++ ++ LP A S + ++++ GE V KAL + +L +
Sbjct: 123 GKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRK 181
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 13/169 (7%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G ++K++ E+ A I++ D I+ IS KE E P SP
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQSP 72
Query: 323 TITAALRLQPRCSEKTERESGD-----------PVITTRILVPSAQIGCLIGRGGAIISE 371
+ A +R+ R S + E GD + R+LV S+Q LIG+ G+II
Sbjct: 73 AMDAVMRVFKRVSGLSPGE-GDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKS 131
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
++ T A++ ++ + +P A DE +V+I G AL V +LR
Sbjct: 132 IQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLR 180
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 25/154 (16%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R++VP ++G +IG+ G++++ + ETRA+IRIL+ PL +S D ++ ++G+
Sbjct: 14 RLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEG---PL-GIS-DRIVLISGK----- 63
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
E P Q + + +++ +S G N + A + S
Sbjct: 64 -----------EEPEAPQSPAMDAVMRVFKR----VSGLSPGEGDNTGSAAAAAGSAFCS 108
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+RL+ + +IGK G IIK I++ +GA++ V
Sbjct: 109 IRLLVASSQAINLIGKQGSIIKSIQENTGAAVHV 142
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 133/298 (44%), Gaps = 72/298 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIY---------------------------QSSGVYLSAPLVGSY 247
+ + SSS I+ Q S +S G
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFS 231
Query: 248 GNYSARRDE--------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
G S+ DE ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GVESSSPDEKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 39/158 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S SS +N AS+R
Sbjct: 67 AIFKAFAMIIDKLEEDIS-------SSMTN------------------------STASSR 95
Query: 261 -EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 65/290 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-- 216
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 217 ------------PSRSQHLLLSSSSNIYQSSGVYL-----------------SAPLVGSY 247
P S ++ + Y G Y P+
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+SA D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 TGFSAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 280
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISS--------------------------SMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 151/339 (44%), Gaps = 39/339 (11%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI ++ +F+
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDA--IFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + IV +S+++ +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 AMIA-------YKFEEDIV--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 124 RESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP-- 177
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL---VCPAGNIGGVIGKGGGI 283
Y+ S P++ + G A AS SL L PA I G
Sbjct: 178 -----YRPKPA--STPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPD 230
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
+ ++ Q + G F + ++ Q + + ++
Sbjct: 231 LTKLHQLAMQQTPFPPLG----------QANPAFPGEKLPLHSSEEAQNLMGQSSGLDAS 280
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 281 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ +V S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IVNSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 127/282 (45%), Gaps = 62/282 (21%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------------- 46
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGKGGQVIQ 164
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGKGG I+
Sbjct: 47 --NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 102
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-------- 216
IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 103 EIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 158
Query: 217 ------PSRSQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGNYSARRD 255
P S ++ + Y G Y + P ++GN
Sbjct: 159 VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGL 218
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 219 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 260
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G +K++R+ESGA I + + T F+ + I L
Sbjct: 6 VGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA-MIIDKLEEDI 64
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
S + P +T R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 65 SSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 114
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 56/284 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKG 173
Query: 221 QHLLLSSS---------------------------SNIYQSSGVYLSAPLVGSYGNYSAR 253
++++ + ++Q + P +G
Sbjct: 174 VTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPA 233
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 234 GLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 97/172 (56%), Gaps = 8/172 (4%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
V+R + P+ K+GSIIG+ GE++K+ ETK+ IR+ + G +RIV I E
Sbjct: 47 VFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGK-------E 99
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
+ +SPA +A+ RV R+ + A+++ + +VR+LV + Q +IGK G +I
Sbjct: 100 EPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLI 159
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
++I+ T A +R+L + +P A + + ++++ GE V KAL + L +
Sbjct: 160 KSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRK 211
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK+ +E+ A I+V D I+ IS KE E P SP
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 323 TITAALRLQPRCSEKTE-----RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ A +R+ R S +E + S + R+LV S Q LIG+ G++I ++ T
Sbjct: 108 AMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
AS+R+L+ + VP A DE +V++ G AL V LR
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 10/201 (4%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
Q D+ + + D E+R G D V+R + P+ K+G+IIG+ G+ +K++ ET+
Sbjct: 45 QPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETR 104
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
+ I++ + +RIV I E+ ++SPA DA+ RV R+ DD+
Sbjct: 105 ARIKVLDGPVNTPDRIVLISGK-------EEPEAYMSPAMDAVLRVFRRVSGLPDNDDDD 157
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+VR+LV + Q +IGK G +I++I + A +RIL +E P A + +
Sbjct: 158 VQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERI 217
Query: 193 LQVAGEPAVVRKALVQIASRL 213
+ + GE + KAL I L
Sbjct: 218 VDLQGEALKILKALEAIVGHL 238
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSP 322
R++ P +G +IG+ G IK++ +E+ A IKV D I+ IS KE E SP
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 323 TITAALRLQPRCS------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ A LR+ R S + + +G + R+LV S Q LIG+ G++I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
AS+RIL+ E P A +DE +V + G AL + LR
Sbjct: 196 GASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 127/285 (44%), Gaps = 58/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIV---AED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I ED S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------LLSSSSNIYQSSGVYL------------------SAPLVGSYGNYSA 252
+ ++ + Y G Y PL + + A
Sbjct: 174 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPA 233
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 234 GLD-ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++SS SN S
Sbjct: 67 AIFKAFAMIAYKFEED-------IISSMSN-----------------------SPATSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIISSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 54/395 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP-LVGSYGNYSARRDEASAREFSLR 265
V+I +L E + +L ++ + Y SS L P G + ++ + ++ +
Sbjct: 276 VEIMKKLRE--AFENDMLAVNTHSGYFSS---LYPPHQFGPFPHHHSYPEQEI-----VN 325
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSP 322
L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 326 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEA 378
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A +
Sbjct: 379 QFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV- 437
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
I+ + P E+EE +V+I G + +A ++
Sbjct: 438 IVPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 469
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 272 ANAEVEIMKKLR 283
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 130/306 (42%), Gaps = 78/306 (25%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEGT--CPERIVTITGPT--------- 68
Query: 107 GEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I ED S+ + +T+R++VPA Q G +IGKGG
Sbjct: 69 --------DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGG 120
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 121 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 176
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR------------ 265
+ +S+ I + G + ++ S GN++ A F+++
Sbjct: 177 ATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQGQYAIPHPDLTK 236
Query: 266 ----------------------------------LVCPAGNIGGVIGKGGGIIKQIRQES 291
L P IG +IG+ G I +IRQ S
Sbjct: 237 LHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMS 296
Query: 292 GASIKV 297
GA IK+
Sbjct: 297 GAQIKI 302
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R++VP++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 51/284 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + T++F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--TSIFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ ++ + S+ + +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 SMIIEKLEEDI---------STSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR------- 219
R AQ+++ D + S + + VAG P + + + QI + E+P +
Sbjct: 124 RESAGAQVQVAGD----MLPNSTERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYR 179
Query: 220 -------------------SQHLLLS-------SSSNIYQSSGVYLSAPLVGSYGNYSAR 253
QH + S + ++Q + P+ S + A
Sbjct: 180 PKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQLAMQQSPFPIAHSNQGFQAG 239
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 240 MD-ASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 282
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 SIFKAFSMIIEKLEEDISTS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
++RLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQV 133
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R + A ++
Sbjct: 74 -MIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 61/286 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+ ++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQIFVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVYL-----------------------SAPLVGSYGNYS 251
+ + SSS I+ Y P+ +S
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTGFS 231
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 AGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + SS +N AS
Sbjct: 67 AIFKAFAMIIDKLEED-------IRSSMTN-----------------------STAASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+L LV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L R S + P +T ++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 127/289 (43%), Gaps = 65/289 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-- 216
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 217 ------------PSRSQHLLLSSSSNIYQSSGVYL-----------------SAPLVGSY 247
P S ++ + Y G Y P+
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
+SA D ASA+ S L P IG +IG+ G I +IRQ SGA IK
Sbjct: 232 TGFSAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 279
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSS--------------------------MTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 55/283 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------LLSSSSNIYQSSGVY-LSAPLVGSYGNYSARRD-------------- 255
+ ++ + Y G Y + P + + ++
Sbjct: 174 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPG 233
Query: 256 -EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 234 LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 276
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 34/139 (24%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
++V + IGCLIG+GG+II+EMR TR++IRIL+ EN+PK+A +D+EMVQ
Sbjct: 34 VIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMVQ---------- 83
Query: 411 ALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGN 470
G++ PVLPY+P +D D Y +RD + GRG+SY++G
Sbjct: 84 -----------------GSVPGFLPVLPYIPAPVDGPDVLNYDSRDGKRHGRGHSYSSGY 126
Query: 471 L------PGRDSYGSYGGS 483
PG D+YGSY S
Sbjct: 127 GGSSDLGPG-DTYGSYASS 144
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
++V A+ IGC+IGKGG +I +R TR+ IRIL E+LP A DE++Q
Sbjct: 34 VIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIASDDDEMVQ 83
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 62/292 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE ERIVTI +EG
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTEG------- 70
Query: 107 GEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+FR I ED ++ + +T+R++ P Q G +IGKGG
Sbjct: 71 ----------IFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGG 120
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR- 219
I+ IR T AQ+++ D + S + + ++G P + + + I S + E+P +
Sbjct: 121 SKIKEIRETTGAQVQVAGD----MLPDSTERAVTISGTPQAITQCVRHICSVMLESPPKG 176
Query: 220 ------------SQHLLLSSS-------------------SNIYQSSGVYLSAPLVGSYG 248
H +L+ + ++Q + ++ P +G
Sbjct: 177 ATIPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQDLTKLHQLAMQHIPLPSLGQ-S 235
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
N + +ASA S L P IG +IG+ G I +IRQ SGA IK+ S+
Sbjct: 236 NPTFPGLDASAPTSSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKIASA 287
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 25/133 (18%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI--------IF--- 310
+LRL+ +G +IGK G +K++R+ESGA I + S G+ + + IF
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGSSPERIVTITGPTEGIFRAF 75
Query: 311 -ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+ ++F ED ITAA+ + P +T R++ P +Q G LIG+GG+ I
Sbjct: 76 SMIAQKFEED----ITAAM--------TNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 370 SEMRSATRASIRI 382
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 9/175 (5%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P+ K+GSIIG+ G+++K++ ET++ IR+ + G +R+V I
Sbjct: 60 DCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGK------ 113
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE--LTLITVRMLVPADQIGCVIGKGG 160
ED +SPA DA+ RV R+ E G + ++R+LV + Q +IGK G
Sbjct: 114 -EDVEAPLSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQG 172
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+I++I+ T A +R+L + +P + + ++ + GE V +AL I L +
Sbjct: 173 SIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRK 227
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK++ E+ A I+V + D ++ IS KE E P SP
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 323 TITAALRLQPRCS---EKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ A +R+ R S E +E G I + R+LV S Q LIG+ G+II ++ +T
Sbjct: 123 AMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQEST 182
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
AS+R+L+ VP DE +V + G AL + LR
Sbjct: 183 GASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLR 226
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 133/295 (45%), Gaps = 71/295 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L ++IGSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 26 RMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST--------- 74
Query: 107 GEFVSPAQDALFRVHDRI---VAEDSLADDEFGEL--TLITVRMLVPADQIGCVIGKGGQ 161
DA+FR I + ED A + + + +T+R+++PA Q G +IGK G
Sbjct: 75 --------DAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGA 126
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS- 220
I+ IR T AQ+++ D L S + + V+G P + + QI + + E P+ S
Sbjct: 127 KIREIRESTGAQVQVAGD----LLPNSTERAVTVSGVPDTIIHCVRQICAVILEVPTESP 182
Query: 221 ---------QH---------LLLSSSSNIYQSSGVYLSAPLVGSYGN------YSARRD- 255
QH L+S S +QS P VG + + YS R
Sbjct: 183 TQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSP----PNPAVGKHWHPIMTDAYSYWRPT 238
Query: 256 -------------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ S++ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 239 TPLLTSLSLPPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKI 293
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ IG +IGK G +K+IR++S A I + I ST F S
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDAVFRAVS 82
Query: 322 PTITAALRLQPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A +L+ ++ + G +T R+++P++Q G LIG+ GA I E+R +T A +
Sbjct: 83 ---MIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-TLRLRANTFEREGALAAHPPVLPY 439
++ + +P E V ++G D + Q+ + L T A A P Y
Sbjct: 140 QV-AGDLLPN---STERAVTVSGVPDTIIHCVRQICAVILEVPTESPTQAWGAFPHQHGY 195
Query: 440 VP--MSLDITDGSKYGNRDNQSRGRGNSY 466
+P M+L + S ++ + G +
Sbjct: 196 LPPKMTLSLISWSPCTHQSPPNPAVGKHW 224
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 163/383 (42%), Gaps = 58/383 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 205
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ +S+ + + G + PL S N S ++++ G
Sbjct: 206 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ---------GQY 256
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 257 AIPHPELTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 306
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I A E
Sbjct: 307 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------ATEGSS 359
Query: 398 MVQITGSLDVASSALSQVTLRLR 420
QIT + A+ +L+Q + R
Sbjct: 360 ERQITITGTPANISLAQYLINAR 382
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 165 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 18/206 (8%)
Query: 13 THFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
T + AA + ++R PG D V+R + P+ K+GSIIG+ GE++K++ E
Sbjct: 29 TESNAAAAASTPPEKRWPG--------WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEE 80
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSL 130
T+S IR+ + G +RIV + E+ +SPA DA+ R+ R+ ++E
Sbjct: 81 TRSRIRVLDAPLGTPDRIVLVSGK-------EEPEAALSPAMDAVVRIFKRVSGLSETDA 133
Query: 131 ADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF 189
+ E L ++R+LV + Q +IGK G +I++I+ T A +R+L + + A
Sbjct: 134 ENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVD 193
Query: 190 DELLQVAGEPAVVRKALVQIASRLHE 215
+ ++++ GE V KAL + L +
Sbjct: 194 ERIVEIQGEALKVLKALEAVVGHLRK 219
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 8/165 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P G +G +IG+ G +IK++ +E+ + I+V + D I+ +S KE E SP
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 323 TITAALRLQPRCS-------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ A +R+ R S E E +G + R+LV S Q LIG+ G++I ++
Sbjct: 114 AMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQEN 173
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T AS+R+L+ + V A DE +V+I G AL V LR
Sbjct: 174 TSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLR 218
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 170/393 (43%), Gaps = 86/393 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFSMII--DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ + + S+P++ + G S R+ A E L
Sbjct: 172 KGVTIPYRPKPS---------SSPVIFAGGQVS-RQAGGHACETDLW------------- 208
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
+ R+ + +D+ G I + + P P +T +L + S
Sbjct: 209 -------EGRRSHTGGVSLDAVDLHGAYTI-----QGQYAIPQPDLTKLHQLAMQQSHFP 256
Query: 339 ERESGDP-----------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
SG+ + + +P+ IGC+IGR GA I+E+R + A I+I
Sbjct: 257 MSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN--- 313
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
V ++ V ITGS AS +L+Q + +R
Sbjct: 314 --PVEGSNDRQVTITGS--TASISLAQYLINVR 342
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S SS +N S S P V
Sbjct: 67 AIFKAFSMIIDKLEEDIS-------SSMTNSTAS-----SKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 58/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 205
Query: 221 QHL----------LLSSSSNIYQSSGVY------------------LSAPLVGSYGNYSA 252
+ ++ + Y G Y P +G N +
Sbjct: 206 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAF 264
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 265 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 170/393 (43%), Gaps = 86/393 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFSMII--DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ + + S+P++ + G S R+ A E L
Sbjct: 172 KGVTIPYRPKPS---------SSPVIFAGGQVS-RQAGGHACETDLW------------- 208
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
+ R+ + +D+ G I + + P P +T +L + S
Sbjct: 209 -------EGRRSHTGGVSLDAVDLHGAYTI-----QGQYAIPQPDLTKLHQLAMQQSHFP 256
Query: 339 ERESGDP-----------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
SG+ + + +P+ IGC+IGR GA I+E+R + A I+I
Sbjct: 257 MSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN--- 313
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
V ++ V ITGS AS +L+Q + +R
Sbjct: 314 --PVEGSNDRQVTITGS--TASISLAQYLINVR 342
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S SS +N S S P V
Sbjct: 67 AIFKAFSMIIDKLEEDIS-------SSMTNSTAS-----SKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 184/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V+I +L E + +L ++ + Y SS L P +G + + + + L
Sbjct: 339 VEIMKKLRE--AFENDMLAVNTHSGYFSS---LYPP--HQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 335 ANAEVEIMKKLR-EAFEND 352
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 130/286 (45%), Gaps = 62/286 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 219 RS--------------------------QHLLLSSS-SNIYQSSGVYLSAPLVGSYGNYS 251
+ QH + + ++Q + P+ S ++
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFT 231
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GM--DASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 131/345 (37%), Gaps = 117/345 (33%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 AIFKAFSMIIEKLEEDISSS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKE--- 315
+LR+V PA G +IGKGG IK+IR+ +GA ++V D + I T +
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSII 156
Query: 316 ---------FFEDPSPTITAALRLQPRCSEKTERESGDPVI------------------- 347
E P +T R +P SG PVI
Sbjct: 157 ECVKQICVVMLESPPKGVTIPYRPKP---------SGSPVIFAGGQAYAVQGQHAIPQPD 207
Query: 348 TTRI-----------LVPSAQ----------------------IGCLIGRGGAIISEMRS 374
T++ + PS Q IGC+IGR GA I+E+R
Sbjct: 208 LTKLHQLAMQQSPFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQ 267
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ A I+I V + V ITGS S A + RL
Sbjct: 268 MSGAQIKIAN-----PVDGSTDRQVTITGSPASISLAEYLINARL 307
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 58/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 205
Query: 221 QHL----------LLSSSSNIYQSSGVY------------------LSAPLVGSYGNYSA 252
+ ++ + Y G Y P +G N +
Sbjct: 206 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAF 264
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 265 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 170/393 (43%), Gaps = 86/393 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFSMII--DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ + + S+P++ + G S R+ A E L
Sbjct: 172 KGVTIPYRPKPS---------SSPVIFAGGQVS-RQAGGHACETDLW------------- 208
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
+ R+ + +D+ G I + + P P +T +L + S
Sbjct: 209 -------EGRRSHTGGVSLDAVDLHGAYTI-----QGQYAIPQPDLTKLHQLAMQQSHFP 256
Query: 339 ERESGDP-----------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
SG+ + + +P+ IGC+IGR GA I+E+R + A I+I
Sbjct: 257 MSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN--- 313
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
V ++ V ITGS AS +L+Q + +R
Sbjct: 314 --PVEGSNDRQVTITGS--TASISLAQYLINVR 342
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A +S
Sbjct: 67 AIFKAFSMIIDKLEEDISS--------------------------SMTNSTA----SSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E + +L +++ + Y SS L P +G + + + + L
Sbjct: 339 IEIMKKLRE--AFENDMLAANTHSGYFSS---LCPP--HQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFEREGALAAH 433
+SA ++ +LR FE + LAA+
Sbjct: 335 ASAEIEIMKKLR-EAFEND-MLAAN 357
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 133/299 (44%), Gaps = 74/299 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN---- 249
+ S ++ + Y G Y + P S+GN
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFS 231
Query: 250 -----------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 58/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------LLSSSSNIYQSSGVY------------------LSAPLVGSYGNYSA 252
+ ++ + Y G Y P +G N +
Sbjct: 174 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAF 232
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 233 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 86/396 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFSMII--DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ + + S+P++ + G S R+ A E L
Sbjct: 172 KGVTIPYRPKPS---------SSPVIFAGGQVS-RQAGGHACETDLW------------- 208
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
+ R+ + +D+ G I + + P P +T +L + S
Sbjct: 209 -------EGRRSHTGGVSLDAVDLHGAYII-----QGQYAIPQPDLTKLHQLAMQQSHFP 256
Query: 339 ERESGDP-----------VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
SG+ + + +P+ IGC+IGR GA I+E+R + A I+I
Sbjct: 257 MSHSGNTGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN--- 313
Query: 388 VPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
V ++ V ITGS AS +L+Q + +R ++
Sbjct: 314 --PVEGSNDRQVTITGS--TASISLAQYLINVRLSS 345
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A +S
Sbjct: 67 AIFKAFSMIIDKLEEDISS--------------------------SMTNSTA----SSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 186/395 (47%), Gaps = 54/395 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 115 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 171
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 172 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 214
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 215 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 270
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP-LVGSYGNYSARRDEASAREFSLR 265
V+I +L E + +L ++ + Y SS L P G + ++ + ++ +
Sbjct: 271 VEIMKKLRE--AFENDMLAVNTHSGYFSS---LYPPHQFGPFPHHHSYPEQEI-----VN 320
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSP 322
L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 321 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEA 373
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A +
Sbjct: 374 QFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV- 432
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
I+ + P E+EE +V+I G + +A ++
Sbjct: 433 IVPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 464
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+ P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 96 TPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 155
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 156 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 209
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 210 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 266
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 267 ANAEVEIMKKLR 278
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 127/285 (44%), Gaps = 58/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------LLSSSSNIYQSSGVY------------------LSAPLVGSYGNYSA 252
+ ++ + Y G Y P +G N +
Sbjct: 174 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAF 232
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 233 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 58/284 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVYL---------------------SAPLVGSYGNYSAR 253
+ + S S I+ Y +P + N
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFT 231
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A S
Sbjct: 67 AIFKAFSMIIEKLEED--------------------------ISSSMTNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 58/284 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVYL---------------------SAPLVGSYGNYSAR 253
+ + S S I+ Y +P + N
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPSNQGFT 231
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A S
Sbjct: 67 AIFKAFSMIIEKLEED--------------------------ISSSMTNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P+ K+GSIIG+ GE+VK++ ET++ IRI E G +RIV I
Sbjct: 52 DNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGK------ 105
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDE--------FGELTLITVRMLVPADQIGC 154
E+ +SPA DA+ RV R+ D ++R+LV + Q
Sbjct: 106 -EEPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAIN 164
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+IGK G +I++I+ T +R++ ++ +P A S + ++++ GE V KAL + L
Sbjct: 165 LIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLR 224
Query: 215 E 215
+
Sbjct: 225 K 225
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G ++K++ E+ A I++ D I+ IS KE E P SP
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 323 TITAALRLQPRCSEKTERESGDP------------VITTRILVPSAQIGCLIGRGGAIIS 370
+ A LR+ R S + E + + R+LV S+Q LIG+ G+II
Sbjct: 115 AMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIK 174
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
++ T +R++ +++P A DE +V+I G AL V LR
Sbjct: 175 SIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLR 224
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 25/155 (16%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R++VP ++G +IG+ G++++ + ETRA+IRIL+ PL D ++ ++G+
Sbjct: 56 RLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEG---PLGIT--DRIVLISGK----- 105
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQS-SGVYLSAPLVGSYGNYSARRDEASAREF 262
E P + + +++ SG+ +P G +A A +
Sbjct: 106 -----------EEPEAPLSPAMDAVLRVFKRVSGL---SPGEGDNTGSAAAAAAAGSAFC 151
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S+RL+ + +IGK G IIK I++ +G ++V
Sbjct: 152 SIRLLVASSQAINLIGKQGSIIKSIQENTGVVVRV 186
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 276 IEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 326
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 327 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 379
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 380 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 438
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 439 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 469
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 272 ASAEIEIMKKLR 283
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 136/288 (47%), Gaps = 45/288 (15%)
Query: 52 LRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVS 111
++++GSIIGK G+ +K+ R E+ + I IS+ C ERIVT+ S+E +
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGSTEA----------IL 48
Query: 112 PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
A + R + V+ S ++ +T+R++VPA Q G +IGKGG I+ IR E R
Sbjct: 49 KAFSLIARKFEE-VSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIR-EAR 106
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-------- 223
A I++ E LP S + + V+G + K + QI + E+P + +
Sbjct: 107 ASIQV-ASEMLPN---STERAVTVSGTADAITKCIYQICCVMMESPPKGATIPYRPKPAM 162
Query: 224 --LLSSSSNIYQSSGVYL---------------SAPLVG--SYGNYSARRDEASAREFSL 264
++ + Y G Y APL+ S G + + A+A +
Sbjct: 163 PPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAINPQAAIATASTTTT 222
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ P IG +IGKGG I +IRQ SGA+IK+ +S D + IS
Sbjct: 223 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTIS 270
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G IK+ R+ESGA I + S G+ + + + E I A L
Sbjct: 4 VGSIIGKKGDNIKKFREESGAKINI-SDGSCPERIVTVTGSTE-------AILKAFSLIA 55
Query: 333 RCSEKTERES-------GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
R E+ S P +T R++VP++Q G LIG+GG+ I E+R A RASI++ +
Sbjct: 56 RKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIREA-RASIQV-AS 113
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQV 415
E +P E V ++G+ D + + Q+
Sbjct: 114 EMLPN---STERAVTVSGTADAITKCIYQI 140
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 57/220 (25%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSE------- 98
R + P + GS+IGKGG +K++R E +++I++ SE +P ER VT+ +++
Sbjct: 80 RLIVPASQCGSLIGKGGSKIKEIR-EARASIQVASEMLPNSTERAVTVSGTADAITKCIY 138
Query: 99 ------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
G + G++ P D L ++H +
Sbjct: 139 QICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPD-LTKLHQLALQHA 197
Query: 129 SL----------ADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
L + T M +P D IGC+IGKGG I IR + A I+I
Sbjct: 198 PLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISN 257
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKA--LVQIASRLHEN 216
E S D + ++G P + A L+ + LH+N
Sbjct: 258 SEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN 292
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 133/299 (44%), Gaps = 74/299 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN---- 249
+ S ++ + Y G Y + P ++GN
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 250 -----------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 35 EQRGIGSEDT-VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
E R G T V+R L P K+G++IG GE +++L ETK+ +R+ ER V I
Sbjct: 49 ENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVII 108
Query: 94 YSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
++ E E PA DAL RV++ I+ +D L D + ++ R+L P++Q
Sbjct: 109 FAK-------EQPDEPKPPAIDALLRVYECIINDDGL-DVRYN--NIVVARILTPSEQAA 158
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+IG G VI I+ ++ I ++ D LP AL D ++++ G PA V +AL +A L
Sbjct: 159 SLIGDQGSVINYIKKASKTNIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVACHL 217
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
R++ PA +G VIG G ++++ +E+ A ++V + + I KE ++P P
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 324 ITAALRLQPRCSEKTERESG-----DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
AL R E + G + ++ RIL PS Q LIG G++I+ ++ A++
Sbjct: 121 AIDALL---RVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKT 177
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
+I ++ + ++P VA ED+ +++I G AL V LR R + P P
Sbjct: 178 NIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHR----SVIPLFDP 232
Query: 439 YVPMSLDITDGSKYGNRDNQ 458
+V + + D + D+
Sbjct: 233 HVSIPISPVDMPPFHYSDHH 252
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 149/345 (43%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ +S+ + + G + PL S N S ++++ G
Sbjct: 174 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ---------GQY 224
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 225 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 274
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ ++ P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 275 SGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 184/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E + +L ++ + Y SS L P +G + + + + L
Sbjct: 339 IEIMKKLRE--AFENDMLAVNTHSGYFSS---LYPP--HQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 335 ANAEIEIMKKLR 346
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 133/299 (44%), Gaps = 74/299 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN---- 249
+ S ++ + Y G Y + P ++GN
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 250 -----------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ASA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 289
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 134/288 (46%), Gaps = 64/288 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 31 RMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG--SCPERITTITGST--------- 79
Query: 107 GEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGG 160
DA+FR I E+ L T+ +T+R+++PA Q G +IGK G
Sbjct: 80 --------DAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAG 131
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D L S + + V+G P + + + QI + + E+P +
Sbjct: 132 AKIKEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIIQCVRQICAVILESPPKG 187
Query: 221 QHL-----------LLSSS-----------------SNIYQSSGVYLSAPLVGSYGNYSA 252
+ LLS++ + + Q SG +S +G + A
Sbjct: 188 ATIPYHPNLSLGPVLLSANQGFSMQGQYGGISQAEVAKLQQLSGHPVSFSSLGQTPSIVA 247
Query: 253 RRD---EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D + S++EF + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 248 GLDTNSQNSSQEF----LVPNDLIGCIIGRQGSKISEIRQMSGAHIKI 291
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 38/176 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
DR+ + D+ ++ +TL T+RML+ ++G +IGK G+ ++ IR ++ A+I I +
Sbjct: 10 DRMSSSDNGLEETELSITL-TLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGS- 67
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
C + + + G V +A+ IA +L E+
Sbjct: 68 ---CP---ERITTITGSTDAVFRAVSMIAFKLEED------------------------- 96
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
G + S +LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 97 -----LGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQV 147
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 21/131 (16%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + +EG C I+T D
Sbjct: 28 LTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITI----SEGS-CPERITTITGSTD-- 80
Query: 322 PTITAALRLQPRCSEKTERESG----------DPVITTRILVPSAQIGCLIGRGGAIISE 371
A R + K E + G P +T R+++P++Q G LIG+ GA I E
Sbjct: 81 ----AVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKE 136
Query: 372 MRSATRASIRI 382
+R T A +++
Sbjct: 137 IRETTGAQVQV 147
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 17/197 (8%)
Query: 21 TNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
TN + R PG D V+R + P+ K+G+IIG+ G+ +K++ ET++ I++
Sbjct: 59 TNDFAAERWPG--------WPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVL 110
Query: 81 ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-- 138
+ +RIV I E+ ++SPA DA+ RV R+ DD+
Sbjct: 111 DGPVNTPDRIVLISGK-------EEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGS 163
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+VR+LV + Q +IGK G +I++I + A +RIL +E P A + ++ + GE
Sbjct: 164 AFCSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGE 223
Query: 199 PAVVRKALVQIASRLHE 215
+ KAL I L +
Sbjct: 224 ALKILKALEAIVGHLRK 240
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 7/179 (3%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+++A R + R++ P +G +IG+ G IK++ +E+ A IKV D I
Sbjct: 61 DFAAERWPGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRI 120
Query: 309 IFISTKEFFED-PSPTITAALRLQPRCS------EKTERESGDPVITTRILVPSAQIGCL 361
+ IS KE E SP + A LR+ R S + + +G + R+LV S Q L
Sbjct: 121 VLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINL 180
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
IG+ G++I + + AS+RIL+ E P A +DE +V + G AL + LR
Sbjct: 181 IGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLR 239
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 IEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEVVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/119 (42%), Positives = 72/119 (60%), Gaps = 2/119 (1%)
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQV 162
D E + PAQDAL RVH I E S D + R+LV QIG +IGKGG
Sbjct: 11 DENEPICPAQDALLRVHSVIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGKGGNN 70
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
IQ +RTE+ AQI+I + + LP CA SFDEL+ ++G+ V+KAL +++ L+++ + Q
Sbjct: 71 IQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFLYKHLPKEQ 129
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R+LV ++QIG LIG+GG I +MR+ + A I+I + +P A+ +E+V I+G
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVK 111
Query: 410 SALSQVT 416
AL V+
Sbjct: 112 KALYAVS 118
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 IEIMKKLRE---AFENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 IEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 95/181 (52%), Gaps = 18/181 (9%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +R+ E G ERIV +
Sbjct: 55 DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGK------ 108
Query: 103 FEDSGEFVSPAQDALFRVHDRI------VAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
ED + PA DAL RV R+ AE + A G + R+LVP Q +I
Sbjct: 109 -EDPALELPPAMDALMRVFKRVSGITDGAAEGTQAATAPG---VCAARLLVPGAQAINLI 164
Query: 157 GKGGQVIQNIRTETRAQIRILK--DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
GK G I+ I+ T A IR++ + P + + ++++ GE V KAL +++ L
Sbjct: 165 GKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLR 224
Query: 215 E 215
+
Sbjct: 225 K 225
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS-- 321
RLV P +G +IG+ G +IK++ +E+ A ++V + I+ +S KE DP+
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKE---DPALE 114
Query: 322 --PTITAALRLQPRCS-------EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ R S E T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 115 LPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAI 174
Query: 373 RSATRASIRILT--NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ T A+IR+++ P EDE +V+I G + AL V+ LR
Sbjct: 175 QEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLR 224
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 103/184 (55%), Gaps = 10/184 (5%)
Query: 35 EQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
EQR G D V+R + P+ K+G IIG+ G+++K+L ETK+ +R+ + G +RI+ I
Sbjct: 60 EQRWPGWPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILI 119
Query: 94 YSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLADDEFGELTLITVRMLVPADQ 151
E E + +SPA DA+ R+ R+ ++E + +TL ++R+LV + Q
Sbjct: 120 SGKEE----LEAA---ISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQ 172
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
+IGK G +I++I+ + A +R+L + + A + + ++ + GE +V KAL +
Sbjct: 173 AISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIG 232
Query: 212 RLHE 215
L +
Sbjct: 233 HLRK 236
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P G +GG+IG+ G +IK++ E+ A ++V + D II IS KE E SP
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 323 TITAALRLQPRCSEKTERES------GDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ A +R+ R S +E +S G + + R+LV S Q LIG+ G II ++ ++
Sbjct: 132 AMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESS 191
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
AS+R+L+ + V A +E +V + G + AL V LR
Sbjct: 192 GASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLR 235
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 74/298 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN---- 249
+ S ++ + Y G Y + P ++GN
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 250 -----------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
Y A D ASA+ S L P IG +IG+ G I +IRQ SGA IK
Sbjct: 232 GIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 288
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 59/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQSSGVY-------LSAPLVGSYGNYSARRD------------ 255
+ + S S I+ Y + P + + ++
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQ 231
Query: 256 ---EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 GGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 276
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 AIFKAFSMIIEKLEEDISSS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 47/389 (12%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E +D I +++L +G +IGK G+
Sbjct: 256 --------CSAACRMILDIMQKEANETKTTED-------IPLKILAHNSLVGRLIGKEGR 300
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
++ I +T +I I L+D L + + + V G KA V+I +L E
Sbjct: 301 NLKKIEEDTGTKITISSLQD----LTIYNPERTITVKGSIDACCKAEVEITKKLREAYEN 356
Query: 217 --PSRSQHLLLSSSSNIYQ----SSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ +Q L N+ SSG+ + P G A + + + + L P
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPQQAPEQEVVYLFIPT 416
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC----IIFISTKEFFEDPSPTITA 326
+G +IGK G IKQ+ +GASIK+ + AE D +I T E I
Sbjct: 417 QAVGALIGKKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGRIFG 474
Query: 327 ALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE 386
L+ + S K E + + T I VPS+ G +IG+GG ++E+++ T A + I+ +
Sbjct: 475 KLKEENFFSAKEEVK-----LETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRD 528
Query: 387 NVPKVAYEDEEMVQITGSLDVASSALSQV 415
P DE V+I+G + +A ++
Sbjct: 529 QTPD--ENDEVFVKISGHFFASQTAQRKI 555
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
G YG+ R+ +F LR++ P +G +IGK G IK + +++ + + + +++G
Sbjct: 187 GGYGSPRPRQ-----HDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAG 241
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGC 360
A + I ST E +AA R+ +K E+ I +IL ++ +G
Sbjct: 242 A-AEKPITIHSTPE-------GCSAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGR 293
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+ G + ++ T I I + +++ Y E + + GS+D A ++T +LR
Sbjct: 294 LIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLR 351
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 IEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 148/345 (42%), Gaps = 51/345 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ +S+ + + G + PL S N S ++++ G
Sbjct: 174 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ---------GQY 224
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
+ ++ Q + G T F + ++ Q +
Sbjct: 225 AIPHPDLTKLHQLAMQQTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQS 274
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 275 SGLDVSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 139/303 (45%), Gaps = 52/303 (17%)
Query: 32 DETEQRGIGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
D+ E GS + R L +++GSIIGK GE VK++R E+ + I ISE ER
Sbjct: 3 DKEEMASDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPER 60
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPA 149
IVTI +EG +F F AQ + + I A ++ + +T+R++ P
Sbjct: 61 IVTITGPTEG--IFR---AFSMIAQ----KFEEDITA--AMTNSNVTSKPPVTLRLVFPG 109
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
Q G +IGKGG I+ IR T AQ+++ D + S + + ++G P + + + I
Sbjct: 110 SQCGSLIGKGGSKIKEIRETTGAQVQVAGD----MLPDSTERAVTISGTPQAITQCVRHI 165
Query: 210 ASRLHENPSR-------------SQHLLLSSS-------------------SNIYQSSGV 237
S + E+P + H +L+ + ++Q +
Sbjct: 166 CSVMLESPPKGATIPYRPKILPAGAHAVLAPQHSAHAFAIPGQYAFAHQDLTKLHQLAMQ 225
Query: 238 YLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
++ P +G N + ++SA + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 226 HIPLPSLGQ-SNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKI 284
Query: 298 DSS 300
S+
Sbjct: 285 ASA 287
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 25/133 (18%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI--------IF--- 310
+LRL+ +G +IGK G +K++R+ESGA I + S G+ + + IF
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGSSPERIVTITGPTEGIFRAF 75
Query: 311 -ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+ ++F ED ITAA+ + P +T R++ P +Q G LIG+GG+ I
Sbjct: 76 SMIAQKFEED----ITAAM--------TNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 370 SEMRSATRASIRI 382
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 160/377 (42%), Gaps = 66/377 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI ++ +F+
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD--TIFKAF 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + I+ +S+++ +T+R++VPA Q G +IGKGG I+ +
Sbjct: 75 AMIA-------YKFEEDII--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 126 RESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSAR---RDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
S P++ S G SA ++ CPA I G
Sbjct: 182 PKPA---------STPVIFSGGQVSAELLKTTLTPNLTLLMQQKCPAYTIQGQYAIPHPD 232
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
+ ++ Q + G +T F P + AA
Sbjct: 233 LTKLHQLAMQQTPFTPLGQ---------TTPAF-----PGLDAA---------------- 262
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
P T + +P+ IGC+IGR G I+E+R + A I+I A E QIT
Sbjct: 263 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------AMEGSSERQITI 315
Query: 404 SLDVASSALSQVTLRLR 420
+ A+ +L+Q + R
Sbjct: 316 TGTPANISLAQYLINAR 332
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E + E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P
Sbjct: 2 ESTKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDTIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSPA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 25/168 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + +EG+ C I T P+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIVT---ITGPT 67
Query: 322 PTITAALRLQPRCSEKTERE----------SGDPVITTRILVPSAQIGCLIGRGGAIISE 371
TI A + + K E + + P +T R++VP++Q G LIG+GG+ I E
Sbjct: 68 DTIFKAFAM---IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 124
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
MR +T A +++ + +P E V I+G+ + + Q+ + +
Sbjct: 125 MRESTGAQVQV-AGDMLPN---STERAVTISGTPEAIIQCVKQICVVM 168
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 50/274 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+ +GSIIGK G+ +K+ R E+ + I IS+ ERIVTI S+E N+ +
Sbjct: 29 KDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGSTE--NILKA------- 77
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
F + + ED A + + +T+R++VPA Q G +IGKGG I+ IR T
Sbjct: 78 -----FNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKEIREVT 132
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL------- 223
A I++ D + S + + V+G P + + + I + E+P + +
Sbjct: 133 GASIQVAGD----MLPNSTERAVTVSGTPDAISQCVYHICCVMLESPPKGATIPYKPRPA 188
Query: 224 --------------------LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
L+ Y + G L A L +G +A + + + +
Sbjct: 189 SGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFGVQTASQPGNPSSQ-T 247
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
L P IG +IGKGG I +IRQ SGA+IK+
Sbjct: 248 HELTIPNELIGCIIGKGGCKINEIRQCSGATIKI 281
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 32/195 (16%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
EA + ++RL+ ++G +IGK G IK+ R+ESGA I + S G+ + + + E
Sbjct: 14 EAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINI-SDGSSPERIVTITGSTE 72
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES------GDPVITTRILVPSAQIGCLIGRGGAII 369
I A + + E+ + + P +T R++VP++Q G LIG+GG+ I
Sbjct: 73 -------NILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKI 125
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
E+R T ASI++ + +P E V ++G+ D A+SQ + E
Sbjct: 126 KEIREVTGASIQV-AGDMLPN---STERAVTVSGTPD----AISQCVYHICCVMLE---- 173
Query: 430 LAAHPP---VLPYVP 441
PP +PY P
Sbjct: 174 ---SPPKGATIPYKP 185
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 55/217 (25%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN--- 101
R + P + GS+IGKGG +K++R T ++I+++ + +P ER VT+ + + +
Sbjct: 105 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQCV 164
Query: 102 ------LFED-------------------SGEFVSPAQDALFRVHDRIVAED-------- 128
+ E SG V A L ++H + +
Sbjct: 165 YHICCVMLESPPKGATIPYKPRPASGTSTSGPVVF-AGGQLTKLHQLALQQTPYITPGTT 223
Query: 129 ---SLADDEFGELTLI--------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
+LA +FG T T + +P + IGC+IGKGG I IR + A I+I
Sbjct: 224 LPAALA-TQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKIA 282
Query: 178 KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+ S D + + G P + A I + L
Sbjct: 283 GMQE-----GSTDRQVTITGTPESISMAQFLINTSLE 314
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 86/296 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA---------- 210
I+ IR T AQ+++ D + S + + ++G P + + + QI
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQ 205
Query: 211 ----------SRLHE--------------NPS-RSQHLLLSSSSN----IYQSSGVYLSA 241
++LH+ NP+ + L L SS + QSSG+ S
Sbjct: 206 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP 265
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P AS E ++ P IG +IG+ G I +IRQ SGA IK+
Sbjct: 266 P--------------ASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 115/295 (38%), Gaps = 90/295 (30%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 188
Query: 307 ------CIIFISTKEF---FEDPSPTITA----ALRLQP------------------RCS 335
C++ + + P P +T A++ P S
Sbjct: 189 QCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS 248
Query: 336 EKTERESGD--------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
E+ + G P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 249 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-TLRLRANTFE 425
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + L A T +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLEAYTIQ 205
Query: 426 REGALAAHP 434
+ A+ HP
Sbjct: 206 GQYAI-PHP 213
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 29 NPGDETE--QRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG 85
NP DE+E +R G V+R + P+ K+G IIG+ GE++K+ ET + IR+ + G
Sbjct: 26 NPTDESESEKRWPGWPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVG 85
Query: 86 CDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLADDEFGELTLITV 143
+RIV I ED +SPA DA+ R+ R+ ++E + + L ++
Sbjct: 86 TPDRIVLISGK-------EDLEAPLSPAMDAILRIFKRVSGLSETDNNNTAAAGVALCSI 138
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R+LV + Q +IGK G I+ I+ T A IR+L + LP A + + ++ + GE V
Sbjct: 139 RLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGETLKVL 198
Query: 204 KALVQIASRLHE 215
KAL + L +
Sbjct: 199 KALEAVVGHLRK 210
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 85/164 (51%), Gaps = 7/164 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK+ +E+ A I+V + D I+ IS KE E P SP
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 323 TITAALRLQPRCSEKTERE------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ A LR+ R S +E + +G + + R+LV S Q LIG+ G+ I ++ T
Sbjct: 106 AMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENT 165
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
A IR+L+ + +P A DE ++ + G AL V LR
Sbjct: 166 GAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLR 209
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 48/280 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI ++ +F+
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD--TIFKAF 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + I+ +S+++ +T+R++VPA Q G +IGKGG I+ +
Sbjct: 75 AMIA-------YKFEEDII--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL--- 223
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 126 RESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 224 -------LLSSSSNIYQSSGVYL-------------------SAPLVGSYGNYSARRDEA 257
++ S Y G Y PL + + +A
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQATPAFPGL--DA 239
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 240 SPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E S E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P
Sbjct: 2 EPSKIQPEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDTIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSPA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 25/168 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + +EG+ C I T P+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIVT---ITGPT 67
Query: 322 PTITAALRLQPRCSEKTERE----------SGDPVITTRILVPSAQIGCLIGRGGAIISE 371
TI A + + K E + + P +T R++VP++Q G LIG+GG+ I E
Sbjct: 68 DTIFKAFAM---IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 124
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
MR +T A +++ + +P E V I+G+ + + Q+ + +
Sbjct: 125 MRESTGAQVQV-AGDMLPN---STERAVTISGTPEAIIQCVKQICVVM 168
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 84/215 (39%), Gaps = 52/215 (24%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + E
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H + +
Sbjct: 162 KQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 221
Query: 128 DSL-----ADDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
A F L T + +P D IGC+IG+ G I IR + AQI+I
Sbjct: 222 TPFTPLGQATPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 281
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
S + + + G PA + A I +RL
Sbjct: 282 AME-----GSSERQITITGTPANISLAQYLINARL 311
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 48/280 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI ++ +F+
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD--TIFKAF 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + I+ +S+++ +T+R++VPA Q G +IGKGG I+ +
Sbjct: 75 AMIA-------YKFEEDII--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL--- 223
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 126 RESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYR 181
Query: 224 -------LLSSSSNIYQSSGVYL-------------------SAPLVGSYGNYSARRDEA 257
++ S Y G Y PL + + +A
Sbjct: 182 PKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DA 239
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 240 SPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E + E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P
Sbjct: 2 EPTKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDTIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSPA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 25/168 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + +EG+ C I T P+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIVT---ITGPT 67
Query: 322 PTITAALRLQPRCSEKTERE----------SGDPVITTRILVPSAQIGCLIGRGGAIISE 371
TI A + + K E + + P +T R++VP++Q G LIG+GG+ I E
Sbjct: 68 DTIFKAFAM---IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 124
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
MR +T A +++ + +P E V I+G+ + + Q+ + +
Sbjct: 125 MRESTGAQVQV-AGDMLPN---STERAVTISGTPEAIIQCVRQICVVM 168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 56/217 (25%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + E
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H +A
Sbjct: 162 RQICVVMLESPPKGATIPYRPKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQ--LAM 219
Query: 128 DSLADDEFGELTLI-----------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
G+ T T + +P D IGC+IG+ G I IR + AQI+I
Sbjct: 220 QQTPFTPLGQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
S + + + G PA + A I +RL
Sbjct: 280 ANAME-----GSSERQITITGTPANISLAQYLINARL 311
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 137/309 (44%), Gaps = 64/309 (20%)
Query: 32 DETEQRGIGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
D+ E GS + R L +++GSIIGK GE VK++R E+ + I ISE ER
Sbjct: 3 DKEEMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPER 60
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITV 143
IVTI ++E A+FR I ED ++++ +T+
Sbjct: 61 IVTITGATE-----------------AIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTL 103
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R++ P Q G +IGKGG I+ IR T AQ+++ D + S + + ++G P +
Sbjct: 104 RLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGD----MLPDSTERAVTISGTPQAIT 159
Query: 204 KALVQIASRLHENPSRSQ-------------HLLLSSS-------------------SNI 231
+ + I S + E+P + H +L+ + +
Sbjct: 160 QCVRHICSVMLESPPKGATIPYRPKAVTVGVHAVLAPQQSAHAFAIPGQYTFAHQDLTKL 219
Query: 232 YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+Q + ++ P +G N + + SA S + P IG +IG+ G I +IRQ S
Sbjct: 220 HQLAMQHIPLPSLGQ-SNPTFPGLDPSAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQVS 278
Query: 292 GASIKVDSS 300
GA IK+ S+
Sbjct: 279 GAHIKIAST 287
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LRL+ +G +IGK G +K++R+ESGA I + S G+ + + E
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGSSPERIVTITGATEAIFRAF 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I + + P +T R++ P +Q G LIG+GG+ I E+R T A ++
Sbjct: 76 AMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQ 135
Query: 382 I 382
+
Sbjct: 136 V 136
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 66/290 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-- 216
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 217 ------------PSRSQHLLLSSSSNIYQSSGVYL-----------------SAPLVGSY 247
P S ++ + Y G Y P+
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+SA D ++ + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 TGFSASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 279
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDIS--------------------------SSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 86/296 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA---------- 210
I+ IR T AQ+++ D + S + + ++G P + + + QI
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQ 205
Query: 211 ----------SRLHE--------------NPS-RSQHLLLSSSSN----IYQSSGVYLSA 241
++LH+ NP+ + L L SS + QSSG+ S
Sbjct: 206 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP 265
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P AS E ++ P IG +IG+ G I +IRQ SGA IK+
Sbjct: 266 P--------------ASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 115/295 (38%), Gaps = 90/295 (30%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 188
Query: 307 ------CIIFISTKEF---FEDPSPTITA----ALRLQP------------------RCS 335
C++ + + P P +T A++ P S
Sbjct: 189 QCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS 248
Query: 336 EKTERESGD--------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
E+ + G P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 249 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-TLRLRANTFEREGALAAHP 434
+ + +P E V I+G+ D + Q+ + L A T + + A+ HP
Sbjct: 165 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAI-PHP 213
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 184/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
+I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 AEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA +++ +LR FE +
Sbjct: 335 ASAEAEIMKKLR-EAFEND 352
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 133/308 (43%), Gaps = 88/308 (28%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA-------- 210
GG I+ IR T AQ+++ D + S + + +AG P + + + QI
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 211 -----------------------------------------SRLHENPSRSQHLLLSSSS 229
++LH+ + H ++ +
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ SG+ S+P V Y A D ASA+ S L P IG +IG+ G I +IRQ
Sbjct: 232 TGF--SGIESSSPEV---KGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 285
Query: 290 ESGASIKV 297
SGA IK+
Sbjct: 286 MSGAQIKI 293
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 149/355 (41%), Gaps = 81/355 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--------- 68
Query: 107 GEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I ED S+ + +T+R++VPA Q G +IGKGG
Sbjct: 69 --------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGG 120
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 121 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 176
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ +S+ I + G + ++ S GN++ R + + L C
Sbjct: 177 ATIPYRPKPASAPIIFAGGQVRADTILASAGNHTELR-LSYLTDLCLNCAC--------- 226
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---QPRC 334
C + + + P P +T +L P
Sbjct: 227 -----------------------------CFQAFTIQGQYAIPHPDLTKLHQLAMQHPPF 257
Query: 335 SEKTERESG-------DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + G P + + +P+ IGC+IGR G+ I+E+R + A I+I
Sbjct: 258 TPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 312
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R++VP++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS----CP---ERIVTITGPTD 69
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ N ++ S P V
Sbjct: 70 AIFKAFSMIALKFEED------------INASMTNSTVTSKPPV---------------- 101
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 --TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 136
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 39/289 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGE--------YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
LI VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 134 KLI-----VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGN---YSARR 254
EP V KA+ I ++ E+P S L +S ++ ++ P+ S Y++
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNISYAN---------VAGPVANSNPTGSPYASPA 235
Query: 255 DEA--SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
D A SA+E + + P +G ++GKGG + + ++ +GA I++ G
Sbjct: 236 DLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 283
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 59/285 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-- 216
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLEQSP 171
Query: 217 ---------PSRSQHLLLSSSSNIYQSSGVYL---------------SAPLVGSYGNYSA 252
P S ++ + Y G + +P + N
Sbjct: 172 PKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPIAPNNQGF 231
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 TGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 276
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 AIFKAFSMIIEKLEEDISSS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 53/215 (24%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI + +
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 99 --------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVA 126
G + G+ P D L ++H +
Sbjct: 160 KQICVVMLEQSPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPD-LTKLHQLAMQ 218
Query: 127 EDS--LADDEFGELTL------ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
+ +A + G + + M +P D IGC+IG+ G I IR + AQI+I
Sbjct: 219 QSPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIAN 278
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
P+ S D + + G PA + A I +RL
Sbjct: 279 ----PVDG-SADRQVTITGSPASISLAEYLINARL 308
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 86/296 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA---------- 210
I+ IR T AQ+++ D + S + + ++G P + + + QI
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQ 173
Query: 211 ----------SRLHE--------------NPS-RSQHLLLSSSSN----IYQSSGVYLSA 241
++LH+ NP+ + L L SS + QSSG+ S
Sbjct: 174 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASP 233
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P AS E ++ P IG +IG+ G I +IRQ SGA IK+
Sbjct: 234 P--------------ASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 90/295 (30%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 156
Query: 307 ------CIIFISTKEF---FEDPSPTITA----ALRLQP------------------RCS 335
C++ + + P P +T A++ P S
Sbjct: 157 QCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS 216
Query: 336 EKTERESGD--------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
E+ + G P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 217 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-TLRLRANTFEREGALAAHP 434
+ + +P E V I+G+ D + Q+ + L A T + + A+ HP
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAI-PHP 181
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 70/295 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ + L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGTPQSIIECVKQICVVMLESPP 171
Query: 219 R--------------------------SQHLLL---SSSSNI-------YQSSGVYLSAP 242
+ QH + SSS++I +Q + P
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSASISPQLTKLHQLAMQQSPFP 231
Query: 243 LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ + + D ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 MGPNNPGFQGGMD-ASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 285
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A S
Sbjct: 67 AIFKAFSMIIEKLEED--------------------------ISSSMTNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 13/179 (7%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +R+ + G ER+V +
Sbjct: 46 DSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGK------ 99
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLVPADQIGCVIGK 158
E+ G + PA DAL RV R+ +A D + + R+LVP Q +IGK
Sbjct: 100 -EEPGLDLPPAMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGK 158
Query: 159 GGQVIQNIRTETRAQIRILK--DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
G I+ I+ T A IR++ + P + ++++ GE V KAL +++ L +
Sbjct: 159 QGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRK 217
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFF-EDPSP 322
R+V P +G +IG+ G +IK++ +E+ A ++V + ++ +S KE D P
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 323 TITAALRLQPR-------CSEKTERESGDP-VITTRILVPSAQIGCLIGRGGAIISEMRS 374
+ A +R+ R ++ T + + P V R+LVP AQ LIG+ GA I ++
Sbjct: 109 AMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQE 168
Query: 375 ATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 169 GTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLR 216
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 48/280 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI ++ +F+
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD--TIFKAF 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + I+ +S+++ +T+R++VPA Q G +IGKGG I+ +
Sbjct: 75 AMIA-------YKFEEDII--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL--- 223
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 126 RESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 224 -------LLSSSSNIYQSSGVYL-------------------SAPLVGSYGNYSARRDEA 257
++ S Y G Y PL + + +A
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGL--DA 239
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 240 APPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E + E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P
Sbjct: 2 ESTKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDTIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSPA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 25/168 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + +EG+ C I T P+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIVT---ITGPT 67
Query: 322 PTITAALRLQPRCSEKTERE----------SGDPVITTRILVPSAQIGCLIGRGGAIISE 371
TI A + + K E + + P +T R++VP++Q G LIG+GG+ I E
Sbjct: 68 DTIFKAFAM---IAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 124
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
MR +T A +++ + +P E V I+G+ + + Q+ + +
Sbjct: 125 MRESTGAQVQV-AGDMLPN---STERAVTISGTPEAIIQCVKQICVVM 168
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 84/217 (38%), Gaps = 56/217 (25%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + E
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H +A
Sbjct: 162 KQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQ--LAM 219
Query: 128 DSLADDEFGELTLI-----------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
G+ T T + +P D IGC+IG+ G I IR + AQI+I
Sbjct: 220 QQTPFTPLGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
S + + + G PA + A I +RL
Sbjct: 280 ANAME-----GSSERQITITGTPANISLAQYLINARL 311
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 132/318 (41%), Gaps = 94/318 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+ + +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGMPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------------------------------LLSSSSNIYQSSGVYLSAPLVGS 246
+ LLS+ +S ++ S L
Sbjct: 174 ATIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLSAEYKTALTSTLWRSPQL--- 230
Query: 247 YGNYSARRDEASAREFSLR---------------------------LVCPAGNIGGVIGK 279
+ S++ EA+ R SLR L P IG +IG+
Sbjct: 231 -AHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGR 289
Query: 280 GGGIIKQIRQESGASIKV 297
G I +IRQ SGA IK+
Sbjct: 290 QGTKINEIRQMSGAQIKI 307
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ N S
Sbjct: 67 AIFKAFAMIAFKFEED------------------------------INNSMTNSPATSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGMPDAIIQCVKQICVVM 166
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 111/228 (48%), Gaps = 32/228 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT--------- 68
Query: 107 GEFVSPAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I ED S+ + +T+R+++PA Q G +IGKGG
Sbjct: 69 --------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGG 120
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 121 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKG 176
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
+ +S+ I + G + L+ S GN++ +A F+++
Sbjct: 177 ATIPYRPKPASAPIIFAGGQVRADTLLASAGNHAVLAQPQTAPAFTIQ 224
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ S
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 322 PTITAALRLQP--RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
AL+ + S + P +T R+++P++Q G LIG+GG+ I E+R +T A
Sbjct: 77 ---MIALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQ 133
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+++ + +P E V I+G+ D + Q+ + +
Sbjct: 134 VQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 169
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS----CP---ERIVTITGPTD 69
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ N ++ S P V
Sbjct: 70 AIFKAFSMIALKFEED------------INASMTNSTVTSKPPV---------------- 101
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 --TLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQV 136
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 133/293 (45%), Gaps = 67/293 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------TAIFKAFSMII--DKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGTAHSIIECVKQICVVMLESPP 171
Query: 219 R--------------------------SQHLLL---SSSSNIY-QSSGVYLSA----PLV 244
+ QH + SSS+ I Q S ++ A P
Sbjct: 172 KGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSKLHQLAMQQGPFP 231
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ N +ASA+ S + P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 MATCNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQMSGAQIKI 284
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ S
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTAIFKAFS 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T RI+VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTT 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S P V
Sbjct: 67 AIFKAFSMIIDKLEEDISSS------------MTNSTATSKPPV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LR+V PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 87/222 (39%), Gaps = 59/222 (26%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDER--------------- 89
R + P + GS+IGKGG +K++R T + ++++ + +P ER
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTAHSIIECV 159
Query: 90 ----IVTIYSSSEGTNL------------------FEDSGEFVSPAQDA--------LFR 119
+V + S +G + + G+ P D+ L +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSK 219
Query: 120 VHDRIVAEDSL----ADDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+H + + + F + + M +P D IGC+IG+ G I IR +
Sbjct: 220 LHQLAMQQGPFPMATCNQGFTGMDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQMSG 279
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
AQI+I P+ S D + + G PA + A I +RL
Sbjct: 280 AQIKIAN----PVDG-STDRQVTITGSPASIGLAEYLIKARL 316
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L ++ G IIGKGG+ V ++R + + + IS+ VPG ERI+T+
Sbjct: 82 RSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGP---------- 131
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQN 165
VS A V ++I+ E++LA+D G + +T+++L+ A+++G +IGK G VI++
Sbjct: 132 ---VSAVAKAYALVAEKIIEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIRS 188
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
I+ + A++ ++E LP LS + ++ + G P + +A+ +I L + P+ + +L
Sbjct: 189 IQETSGAKVS-AQEEPLP---LSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYML 244
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++ +P + +GC+IGKGG I IR + + I+I S + L+ + G P +
Sbjct: 352 QIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADP-----STDSHERLITITGTPESNQ 406
Query: 204 KALVQIASRLHENPSR 219
AL + SRL R
Sbjct: 407 MALYLLYSRLEAEQKR 422
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
+ +I +P+ +GC+IG+GG I+E+R + + I+I E ++ ITG+ +
Sbjct: 350 SQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIAD-----PSTDSHERLITITGTPES 404
Query: 408 ASSALSQVTLRLRA 421
AL + RL A
Sbjct: 405 NQMALYLLYSRLEA 418
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P +G IIGKGG + ++R + S+I+I++ ER++TI + E +
Sbjct: 355 IPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITITGTPESNQM------- 407
Query: 110 VSPAQDALFRVHDRIVAE 127
AL+ ++ R+ AE
Sbjct: 408 ------ALYLLYSRLEAE 419
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 177/381 (46%), Gaps = 49/381 (12%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT- 249
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E LA++ I +++L +G +IGK G+
Sbjct: 250 ---------SEACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGR 293
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I ET +I I L+D L + + + V G A ++I +L E +
Sbjct: 294 NLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAEIEIMKKLRE--AF 347
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+L ++ + Y SS +Y ++S E + L P +G +IGK
Sbjct: 348 ENDMLAVNTHSGYFSS-LYPHHQFSPFPHHHSYPEQEI------VNLFIPTQAVGAIIGK 400
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSE 336
G IKQ+ + +GASIK+ + AEG D ++ I+ P A R+ + E
Sbjct: 401 KGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKE 453
Query: 337 KTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
+ + V + I VPS+ G +IG+GG ++E+++ T A + I+ + P E+
Sbjct: 454 ENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---EN 509
Query: 396 EE-MVQITGSLDVASSALSQV 415
EE +V+I G + +A ++
Sbjct: 510 EEVIVRIIGHFFASQTAQRKI 530
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 95/181 (52%), Gaps = 18/181 (9%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D V+R + P+ K+GSIIG+ GE++K+L ETK+ +R+ E G ERIV + +
Sbjct: 50 DNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAK------ 103
Query: 103 FEDSGEFVSPAQDALFRVHDRI------VAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
ED G + PA DAL RV R+ AE + G + R++VP Q +I
Sbjct: 104 -EDPGLELPPAMDALIRVFKRVNGISDGAAEGTQTSAAPG---VCAARLVVPGAQAINLI 159
Query: 157 GKGGQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
GK G I+ I+ T A IR++ DE P + ++++ GE V KAL +++ L
Sbjct: 160 GKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLR 219
Query: 215 E 215
+
Sbjct: 220 K 220
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP--- 320
R+V P +G +IG+ G +IK++ +E+ A ++V + I+ +S K EDP
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAK---EDPGLE 109
Query: 321 -SPTITAALRLQPR-------CSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ R +E T+ + V R++VP AQ LIG+ GA I +
Sbjct: 110 LPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAI 169
Query: 373 RSATRASIRILT--NENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ T A+IR+++ + P +DE +V+I G + AL V+ LR
Sbjct: 170 QEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLR 219
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 53/393 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT- 249
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E LA++ I +++L +G +IGK G+
Sbjct: 250 ---------SEACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGR 293
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I ET +I I L+D L + + + V G A ++I +L E
Sbjct: 294 NLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAEIEIMKKLREA-FE 348
Query: 220 SQHLLLSSSSNIYQ----------SSGVYLSAPLVGSYGNYSAR--RDEASAREFSLRLV 267
+ L ++ +N+ S+G+ + P G G A A + + L
Sbjct: 349 NDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFAYPEQEIVNLF 408
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTI 324
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 409 IPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQF 461
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I+
Sbjct: 462 KAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IV 520
Query: 384 TNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ P E+EE +V+I G + +A ++
Sbjct: 521 PRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 550
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 132/318 (41%), Gaps = 94/318 (29%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+ + +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGMPDAIIQCVKQICVVMLESPPKG 173
Query: 221 QHL----------------------------------LLSSSSNIYQSSGVYLSAPLVGS 246
+ LLS+ +S ++ S L
Sbjct: 174 ATIPYRPKPASAPVIFAGGQAYTIQGQYAIPHPDDACLLSAEYKTALTSTLWRSPQL--- 230
Query: 247 YGNYSARRDEASAREFSLR---------------------------LVCPAGNIGGVIGK 279
+ S++ EA+ R SLR L P IG +IG+
Sbjct: 231 -AHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGR 289
Query: 280 GGGIIKQIRQESGASIKV 297
G I +IRQ SGA IK+
Sbjct: 290 QGTKINEIRQMSGAQIKI 307
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ N S
Sbjct: 67 AIFKAFAMIAFKFEED------------------------------INNSMTNSPATSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGMPDAIIQCVKQICVVM 166
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 134/291 (46%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA P+ G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 54/280 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE----- 215
I+ IR T AQ+++ D + S + + ++G P + + + QI + E
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQ 173
Query: 216 ------NPSRSQHLLLSSSSNIYQSSGVYLSA------PLVGS------YGNYSARRDEA 257
+P ++ L+ + G A PL S G S +A
Sbjct: 174 GQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGL--DA 231
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 232 SPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 90/295 (30%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ + S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------ITNSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 156
Query: 307 ------CIIFISTKEF---FEDPSPTITA----ALRLQP------------------RCS 335
C++ + + P P +T A++ P S
Sbjct: 157 QCVKQICVVMLEAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSS 216
Query: 336 EKTERESGD--------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
E+ + G P T + +P+ IGC+IGR G I+E+R + A I+I
Sbjct: 217 EEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 7/174 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-TLRLRANTFEREGALAAHP 434
+ + +P E V I+G+ D + Q+ + L A T + + A+ HP
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAI-PHP 181
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 181/394 (45%), Gaps = 54/394 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT- 249
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E LA++ I +++L +G +IGK G+
Sbjct: 250 ---------SEACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGR 293
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I ET +I I L+D L + + + V G A ++I +L E
Sbjct: 294 NLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAEIEIMKKLREA-FE 348
Query: 220 SQHLLLSSSSNIYQ----------SSGVYLSAPLVGSYGNYSARRDEASAR---EFSLRL 266
+ L ++ +N+ S+G+ + P G G A A+ + + L
Sbjct: 349 NDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFAQYPEQEIVNL 408
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 409 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 461
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 462 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 520
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 521 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 551
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 134/307 (43%), Gaps = 79/307 (25%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I +SE C ERIVTI +
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPT--------- 67
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ + +T+R++VPA Q G +IGKGG
Sbjct: 68 --------DAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGG 119
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS-- 218
I+ +R T AQ+++ D + S + + ++G P + + + QI + E+P
Sbjct: 120 SKIKEMRESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKG 175
Query: 219 ---------------------RSQHLLLSSSSNI-----------YQSSGVY-LSAPLVG 245
R+ L +++N+ Y G Y + P +
Sbjct: 176 ATIPYRPKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLT 235
Query: 246 SYGNYSARRD---------------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQE 290
+ ++ +AS++ + L P IG +IG+ G I +IRQ
Sbjct: 236 KLHQLAMQQTPFTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQM 295
Query: 291 SGASIKV 297
SGA IK+
Sbjct: 296 SGAQIKI 302
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E S E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I + + + P
Sbjct: 2 ELSKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINV-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDAIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSQA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ES A I V I T F+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEGNCPERIVTITGPTDAIFKAFA 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + + P +T R++VP++Q G LIG+GG+ I EMR +T A ++
Sbjct: 76 -MIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQ 134
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ + + Q+ + +
Sbjct: 135 V-AGDMLPN---STERAVTISGTPEAIIQCVKQICVVM 168
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 132/299 (44%), Gaps = 74/299 (24%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R----------SQHLLLSSSSNIYQSSGVY-LSAP--------------LVGSYGN---- 249
+ S ++ + Y G Y + P ++GN
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 231
Query: 250 -----------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ASA+ S L P IG +I + G I +IRQ SGA IK+
Sbjct: 232 GIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKI 289
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 69/297 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKG 173
Query: 221 QHLLLSSS---------------------------SNIYQSSGVYLSAPLVGSYGNYSAR 253
++++ + ++Q + P +G
Sbjct: 174 VTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 233
Query: 254 RD-------------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D +AS + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 234 TDRAVPFVRSPWACLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 290
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 132/302 (43%), Gaps = 76/302 (25%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ + +F+
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNA--IFK-- 70
Query: 107 GEFVSPAQDALFRVHDRI--VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
A + D++ V S+ + +T+R++VPA Q G +IGKGG I+
Sbjct: 71 ---------AFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA-------------- 210
IR T AQ+++ D + S + + +AG P + + + QI
Sbjct: 122 EIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKG 177
Query: 211 -----------------------------------SRLHENPSRSQHLLLSSSSNIYQSS 235
++LH+ + H ++ + + S
Sbjct: 178 VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGF--S 235
Query: 236 GVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
G+ S+P V Y A D ASA+ S L P IG +IG+ G I +IRQ SGA I
Sbjct: 236 GIESSSPEV---KGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 291
Query: 296 KV 297
K+
Sbjct: 292 KI 293
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E ++ SS +A AS
Sbjct: 67 AIFKAFAMIIDKLEE---------------VFSSSMTNSTA---------------ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 159/374 (42%), Gaps = 73/374 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +ED + P + +G IIGKGGE + +++ E+ I+I+ G +R
Sbjct: 74 GAMVHQRALTTED----FKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRP 129
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
T+ S E + A+ L + ++ +D G ++ +ML+PA+
Sbjct: 130 CTLTGSPEN----------IEQAKRLLSEIIEQCRYGPGFHNDMDGNGSI--QQMLIPAN 177
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T Q+ +++D+ +P A D+ L++ G+P V++A +
Sbjct: 178 KVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGA---DKPLRITGDPLKVQQARELVV 234
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE--FSLRLVC 268
+ + G++ R E ++ SL +V
Sbjct: 235 KLIRDK-----------------------------DQGDFRTGRAEFGSKMGGTSLDVVV 265
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAAL 328
P +G +IG+ G +IK+I+ ++G I+ DD I + P A
Sbjct: 266 PRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQ-----DDGISPDRVAQVMGQPEHCHHAVH 320
Query: 329 RLQPRCSEKTERESGDPVITTR-----------------ILVPSAQIGCLIGRGGAIISE 371
+ ER+ G V+ R VP+ + G +IG+GG I
Sbjct: 321 LINELVQTAQERD-GYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGETIKN 379
Query: 372 MRSATRASIRILTN 385
++ +RA + + N
Sbjct: 380 IKEQSRAHVELQRN 393
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 123/276 (44%), Gaps = 44/276 (15%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G GS + + L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 154 RYGPGFHNDMDGNGS---IQQMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDDPMP 210
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR-VHDRIVAEDSLADDEFG-ELTLI 141
G D+ + + V A++ + + + D+ + EFG ++
Sbjct: 211 TGADKPLRITGDPLK-----------VQQARELVVKLIRDKDQGDFRTGRAEFGSKMGGT 259
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
++ ++VP +G +IG+ G++I+ I+ + +I+ +D+ +S D + QV G+P
Sbjct: 260 SLDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDD-----GISPDRVAQVMGQPEH 314
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
A+ HL+ + + Q++ ++G G A +
Sbjct: 315 CHHAV---------------HLI----NELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQ 355
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I+++S A +++
Sbjct: 356 -EVTYAVPADKCGLVIGKGGETIKNIKEQSRAHVEL 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 7/167 (4%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN-LFEDSG 107
+ P +G IIG+ GE++K+++++ I+ + +R+ + E +
Sbjct: 264 VVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLIN 323
Query: 108 EFVSPAQDALFRVHDRIVAEDSLAD-DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
E V AQ+ R ++ D + G L V VPAD+ G VIGKGG+ I+NI
Sbjct: 324 ELVQTAQE---RDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGETIKNI 380
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+ ++RA + + ++ P + + G P + KA I R+
Sbjct: 381 KEQSRAHVELQRNP--PPSTDPNVRIFSIRGTPQQLEKARQLIDERI 425
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 48/258 (18%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
L T VP +G +IGKGG+ I I+ E+ +I+I D D + G P
Sbjct: 82 LTTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASD-----SGGMLDRPCTLTGSP 136
Query: 200 AVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE 256
+ +A L +I + P H + + +I Q
Sbjct: 137 ENIEQAKRLLSEIIEQCRYGPGF--HNDMDGNGSIQQ----------------------- 171
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTK 314
++ PA +G VIGKGG IKQ+++ +G + + D G D + I+
Sbjct: 172 ---------MLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGADKPLRITGD 222
Query: 315 EF-FEDPSPTITAALRLQPRCSEKTER-ESGDPV--ITTRILVPSAQIGCLIGRGGAIIS 370
+ + +R + + +T R E G + + ++VP +G +IGR G +I
Sbjct: 223 PLKVQQARELVVKLIRDKDQGDFRTGRAEFGSKMGGTSLDVVVPRFAVGIIIGRNGEMIK 282
Query: 371 EMRSATRASIRILTNENV 388
++++ I+ ++ +
Sbjct: 283 KIQNDAGVRIQFKQDDGI 300
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKEFFEDPSPTITA 326
P +G +IGKGG I +I+QESG I++ S SG D + E E ++
Sbjct: 89 VPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPENIEQAKRLLSE 148
Query: 327 ALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE 386
+ Q R + ++L+P+ ++G +IG+GG I +++ T + ++ ++
Sbjct: 149 IIE-QCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDD 207
Query: 387 NVPKVAYEDEEMVQITG 403
+P A ++ ++ITG
Sbjct: 208 PMPTGA---DKPLRITG 221
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 78/306 (25%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERIVTI +
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTITGPT--------- 67
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 68 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 119
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ +R T AQ+++ D + S + + ++G P + + + QI L E+P +
Sbjct: 120 SKIKEMRESTGAQVQVAGD----MLPNSTERAVTISGAPEAIIQCVKQICVVLLESPPKG 175
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRD---------------------- 255
+ +S+ + S G + PL S N S
Sbjct: 176 ATIPYRPKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSK 235
Query: 256 ------------------------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+AS + + L P IG +IG+ G I +IRQ S
Sbjct: 236 LHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMS 295
Query: 292 GASIKV 297
GA IK+
Sbjct: 296 GAQIKI 301
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R ++ A+I I + + P + ++ + G
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI-SEGNCP------ERIVTITGPTD 68
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 69 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 99 PVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R++SGA I + I T F+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTITGPTDAIFKAFA 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I EMR +T A ++
Sbjct: 76 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQ 134
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ + + Q+ + L
Sbjct: 135 V-AGDMLPN---STERAVTISGAPEAIIQCVKQICVVL 168
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D+V+R + P+ K+GSIIG+ GE++K+L ETK+ +RI E G ERIV +
Sbjct: 45 DSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGK------ 98
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT------LITVRMLVPADQIGCVI 156
ED + PA DAL RV + + D + R+LVP Q +I
Sbjct: 99 -EDPDLELPPAMDALMRVFKXVTG---ITDGAAEXTQAAATPDVCAARLLVPGAQAINLI 154
Query: 157 GKGGQVIQNIRTETRAQIRILK-DEH-LPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
GK G I+ I+ T A IR++ DEH P + ++++ G+ V KAL +++ L
Sbjct: 155 GKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
Query: 215 E 215
+
Sbjct: 215 K 215
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 16/170 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS-- 321
RLV P +G +IG+ G +IK++ +E+ A +++ + I+ +S KE DP
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKE---DPDLE 104
Query: 322 --PTITAALRLQPRCSEKTE-------RESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A +R+ + T+ + V R+LVP AQ LIG+ GA I +
Sbjct: 105 LPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAI 164
Query: 373 RSATRASIRILTNENVPKVAY--EDEEMVQITGSLDVASSALSQVTLRLR 420
+ +T A+IR+++ + + Y +DE +V+I G + AL V+ LR
Sbjct: 165 QESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLR 214
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 184/402 (45%), Gaps = 51/402 (12%)
Query: 24 GSKRR-NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
GS+R+ +PG + Q D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 179 GSQRQGSPGGASGQNH--QNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 236
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI++S EG S A + + + A+D+ DE I
Sbjct: 237 ENAGASEKPITIHASPEG----------CSTACKIIMEIMQK-EAQDTKFTDE------I 279
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
+++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSIET 337
Query: 202 VRKALVQIASRLHEN-------PSRSQHLLLSSSSNIY-----QSSGV----YLSAPLVG 245
KA +I ++ E+ + HLL + N +SG+ L P
Sbjct: 338 CGKAEEEIMKKIRESYESDLSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAA 397
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEG 304
+ NY +A ++ L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 398 AATNYLPYGQQAETE--TVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDA 455
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIG 363
+ ++ I+ P A R+ + E+ + V + +I VPS G +IG
Sbjct: 456 KERMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAQIKVPSYAAGRVIG 510
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
+GG ++E+++ T A + ++ + +P DE +V+ITG
Sbjct: 511 KGGKTVNELQNLTSAEV-VVPRDQIPD--ENDEVIVKITGHF 549
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 12/181 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+ LR++ P +G +IGK G I+ I +++ + I + +++GA I S
Sbjct: 197 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASP---- 252
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
E S + + + ++ T+ P+ +IL + +G LIG+ G + ++ T
Sbjct: 253 EGCSTACKIIMEIMQKEAQDTKFTDEIPL---KILAHNNFVGRLIGKEGRNLKKIEQDTD 309
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVL 437
I I + + Y E + + GS++ A ++ ++R + A+ +L
Sbjct: 310 TKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAHLL 367
Query: 438 P 438
P
Sbjct: 368 P 368
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 29/174 (16%)
Query: 52 LRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVS 111
L ++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 52 LWEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT-------------- 95
Query: 112 PAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG I+
Sbjct: 96 ---DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKE 152
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 153 IRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 202
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 27/158 (17%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAE-------GDDCIIF----ISTKEFFEDPS 321
+G +IGK G +K++R+ESGA I + G IF + +F ED
Sbjct: 55 VGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEED-- 112
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I ++ P S+ P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 113 --IINSMSNSPATSK--------PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 162
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + + E V I+G+ D + Q+ + +
Sbjct: 163 VAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 196
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 37/147 (25%)
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G + KA IA
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTDAIFKAFAMIA 106
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E+ ++ S N A S +LRLV PA
Sbjct: 107 YKFEED--------------------------IINSMSNSPA----TSKPPVTLRLVVPA 136
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 137 SQCGSLIGKGGSKIKEIRESTGAQVQV 163
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTI 93
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI
Sbjct: 131 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 178
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 138/315 (43%), Gaps = 90/315 (28%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-- 216
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 217 ----------PSRSQHLLLS--------SSSNIYQSSGVYLSAPLVG------------- 245
PS S + S+S + + + L++ L G
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYA 231
Query: 246 ---------------------SYGN--YSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
S+GN +SA D ASA+ S L P IG +IG+ G
Sbjct: 232 IPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLD-ASAQTTSHELTIPNDLIGCIIGRQGA 290
Query: 283 IIKQIRQESGASIKV 297
I +IRQ SGA IK+
Sbjct: 291 KINEIRQMSGAQIKI 305
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 39/158 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S SS +N AS+R
Sbjct: 67 AIFKAFAMIIDKLEEDIS-------SSMTN------------------------STASSR 95
Query: 261 -EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSS 96
+G +D R L P + GSIIGKGG + +LR++ + + TVP C ERI+TI SS
Sbjct: 20 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATV----TVPDCPGPERILTIISS 75
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++ N + GE + +D R +D G T + VRMLV Q GC+I
Sbjct: 76 ND--NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCII 133
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG ++ +R +T ++I+I + C +S D ++Q+ G+P + ++ L
Sbjct: 134 GKGGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTA 189
Query: 217 PSR 219
P +
Sbjct: 190 PVK 192
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGD 305
+ N +R + + LR++ P+ G +IGKGG I ++R + A++ V D G E
Sbjct: 10 HSNAPFKRPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERI 69
Query: 306 DCIIFISTKEF---------FEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
II + ED + + + D + R+LV +
Sbjct: 70 LTIISSNDNALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETD--VDVRMLVHQS 127
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
Q GC+IG+GG + E+R T + I+I T+ + +VQITG + S + +V
Sbjct: 128 QAGCIIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVL 183
Query: 417 LRLR 420
L+
Sbjct: 184 DLLK 187
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R+L+P+ G +IGKGG I +RT+ A + + P C + +L +
Sbjct: 25 IELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV------PDCP-GPERILTIISSND 77
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
K L ++ L + SR + +
Sbjct: 78 NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQ---------------------GGET 116
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
+ +R++ G +IGKGG +K++R+++G+ IK+ +S
Sbjct: 117 DVDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKIYTS 156
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 12/183 (6%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSS 96
+G +D R L P + GSIIGKGG + +LR++ + + TVP C ERI+TI SS
Sbjct: 18 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATV----TVPDCPGPERILTIISS 73
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++ N + GE + +D R +D G T + VRMLV Q GC+I
Sbjct: 74 ND--NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCII 131
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG ++ +R +T ++I+I + C +S D ++Q+ G+P + ++ L
Sbjct: 132 GKGGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTA 187
Query: 217 PSR 219
P +
Sbjct: 188 PVK 190
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGD 305
+ N +R + + LR++ P+ G +IGKGG I ++R + A++ V D G E
Sbjct: 8 HSNAPFKRPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCPGPERI 67
Query: 306 DCIIFISTKEF---------FEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
II + ED + + + D + R+LV +
Sbjct: 68 LTIISSNDNALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETD--VDVRMLVHQS 125
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
Q GC+IG+GG + E+R T + I+I T+ + +VQITG + S + +V
Sbjct: 126 QAGCIIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVL 181
Query: 417 LRLR 420
L+
Sbjct: 182 DLLK 185
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R+L+P+ G +IGKGG I +RT+ A + + P C + +L +
Sbjct: 23 IELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV------PDCP-GPERILTIISSND 75
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
K L ++ L + SR + +
Sbjct: 76 NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQ---------------------GGET 114
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
+ +R++ G +IGKGG +K++R+++G+ IK+ +S
Sbjct: 115 DVDVRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKIYTS 154
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 186/408 (45%), Gaps = 60/408 (14%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 184 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 240
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 241 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 283
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 284 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 339
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYG--------------NYSA 252
++I +L E + L ++ +N+ G+ LSA + S G +
Sbjct: 340 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 396
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---II 309
A + + L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++
Sbjct: 397 YHPFAYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMV 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I+ P A R+ + E+ + V + I VPS+ G +IG+GG
Sbjct: 455 IITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 509
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
++E+++ T A + I+ + P E+EE +V+I G + +A ++
Sbjct: 510 VNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 553
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 165 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 224
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 225 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 278
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 279 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 335
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 336 ASAEIEIMKKLR 347
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 181/422 (42%), Gaps = 71/422 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ +T++ + + + G E+ +TIY + E
Sbjct: 287 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 346
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A R+ + V + + GE+ L ++L + IG +IGKGG
Sbjct: 347 -------------NACKRILE--VMQQEANNTNKGEICL---KILAHNNLIGRIIGKGGN 388
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I ET +I + + D + + + + ++ V G + +A QI+++L +EN
Sbjct: 389 TIKRIMQETDTKITVSSIND----INSFNLERIITVKGAIDNMSRAEAQISAKLRQSYEN 444
Query: 217 ------------PSRSQHLLLSSSSNIYQSSGVYL-SAPLVGSYGNYSARRDEASAREFS 263
P +++++ Y S G+Y AP G Y +A+ S +
Sbjct: 445 DLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQE--T 502
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV------DSSGAEGDDCIIFISTKEFF 317
L P +G +IG G I+ I + SGAS+K+ + + + + + E
Sbjct: 503 TYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPE-- 560
Query: 318 EDPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
A + Q EK E S D +T I+VPS+Q+G +IG+GG + E+
Sbjct: 561 --------AQWKAQYLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVREL 612
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA 432
+ T + I++ P+ EDE V I G SA R+RA + L
Sbjct: 613 QRVTGSVIKLPEQGASPQ---EDETTVHIIGPFFSVQSA----QRRIRAMVLQSVVPLQG 665
Query: 433 HP 434
P
Sbjct: 666 RP 667
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 142/320 (44%), Gaps = 51/320 (15%)
Query: 13 THFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
TH Q+ A + + E+ S R L +++GSIIGK GE VK++R +
Sbjct: 27 THSQATVAPAPPDRMSSSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQ 86
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLAD 132
+ + I ISE C ERI TI S+ +F F++ + + A A
Sbjct: 87 SSARITISEG--SCPERITTITGSTAA--VFHAVSMIA-------FKLDEDLCA----AP 131
Query: 133 DEFGELT--LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFD 190
G ++ +T+R+++PA Q G +IGK G I+ IR T AQ+++ D L S +
Sbjct: 132 ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGD----LLPNSTE 187
Query: 191 ELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA----PLVGS 246
+ V+G P + + QI + + E+P + + S ++ V LSA + G
Sbjct: 188 RAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSL---GTVLLSANQGFSVQGQ 244
Query: 247 YGNYSARRD----------------------EASAREFSLRLVCPAGNIGGVIGKGGGII 284
YG + + SA+ S + P IG VIG+ G I
Sbjct: 245 YGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKI 304
Query: 285 KQIRQESGASIKVDSSGAEG 304
+IRQ SGA IK+ + AEG
Sbjct: 305 SEIRQMSGAHIKIGNQ-AEG 323
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 58 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 117
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 118 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 174
Query: 380 IRI 382
+++
Sbjct: 175 VQV 177
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 174/392 (44%), Gaps = 50/392 (12%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E +D I +++L +G +IGK G+
Sbjct: 256 --------CSAACRMILDIMQKEANETKTTED-------IPLKILAHNSLVGRLIGKEGR 300
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
++ I +T +I I L+D L + + + V G KA V+I +L E
Sbjct: 301 NLKKIEEDTGTKITISSLQD----LTIYNPERTITVKGSIDACCKAEVEITKKLREAYEN 356
Query: 217 --PSRSQHLLLSSSSNIYQ----SSGVYLSAPLVGSYGNY---SARRDEASAREFSLRLV 267
+ +Q L N+ SSG+ + P G S +++ + + L
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPPSSPEMSQSAPEQEVVYLF 416
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC----IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ +GASIK+ + AE D +I T E
Sbjct: 417 IPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGR 474
Query: 324 ITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
I L+ + S K E + + T I VPS+ G +IG+GG ++E+++ T A + I+
Sbjct: 475 IFGKLKEENFFSAKEEVK-----LETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IV 528
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+ P DE V+I+G + +A ++
Sbjct: 529 PRDQTPD--ENDEVFVKISGHFFASQTAQRKI 558
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
G YG+ R+ +F LR++ P +G +IGK G IK + +++ + + + +++G
Sbjct: 187 GGYGSPRPRQ-----HDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAG 241
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGC 360
A + I ST E +AA R+ +K E+ I +IL ++ +G
Sbjct: 242 A-AEKPITIHSTPE-------GCSAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGR 293
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+ G + ++ T I I + +++ Y E + + GS+D A ++T +LR
Sbjct: 294 LIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLR 351
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 131/264 (49%), Gaps = 28/264 (10%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 122
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 123 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 178
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGS--YGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
S L +S ++ ++ P+ S G + + SA+E + + P +G ++
Sbjct: 179 SSCLNISYAN---------VAGPVANSNPTGLTAEKLAAESAKEL-VEIAVPENLVGAIL 228
Query: 278 GKGGGIIKQIRQESGASIKVDSSG 301
GKGG + + ++ +GA I++ G
Sbjct: 229 GKGGKTLVEYQELTGARIQISKKG 252
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 64 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 118
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 119 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 56/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E +D I +++L +G +IGK G+
Sbjct: 256 --------CSAACRMILDIMQKEANETKTTED-------IPLKILAHNSLVGRLIGKEGR 300
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
++ I +T +I I L+D L + + + V G KA V+I +L E
Sbjct: 301 NLKKIEEDTGTKITISSLQD----LTIYNPERTITVKGSIDACCKAEVEITKKLREAYEN 356
Query: 217 --PSRSQHLLLSSSSNIYQ----SSGVYLSAPLVG--------SYGNYSARRDEASAREF 262
+ +Q L N+ SSG+ + P G + Y+ +A +E
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPAGYNPFLQQAPEQEV 416
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC----IIFISTKEFFE 318
+ L P +G +IGK G IKQ+ +GASIK+ + AE D +I T E
Sbjct: 417 -VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQF 473
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
I L+ + S K E + + T I VPS+ G +IG+GG ++E+++ T A
Sbjct: 474 KAQGRIFGKLKEENFFSAKEEVK-----LETHIKVPSSAAGRVIGKGGKTVNELQNLTSA 528
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+ I+ + P DE V+I+G + +A ++
Sbjct: 529 EV-IVPRDQTPD--ENDEVFVKISGHFFASQTAQRKI 562
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
G YG+ R+ +F LR++ P +G +IGK G IK + +++ + + + +++G
Sbjct: 187 GGYGSPRPRQ-----HDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAG 241
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGC 360
A + I ST E +AA R+ +K E+ I +IL ++ +G
Sbjct: 242 A-AEKPITIHSTPE-------GCSAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGR 293
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+ G + ++ T I I + +++ Y E + + GS+D A ++T +LR
Sbjct: 294 LIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLR 351
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 30/264 (11%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGSNVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS-RSQHLL 224
IR T AQ+++ D L S + + V+G P + + QI + + E S + Q+
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQYGA 182
Query: 225 LSSS--SNIYQSSG--VYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++ + + + Q SG V ++P V + S + S++EF + P IG VIG+
Sbjct: 183 VTPAEVTKLQQLSGHAVPFASPSVVPGLDPS---TQTSSQEF----LVPNDLIGCVIGRQ 235
Query: 281 GGIIKQIRQESGASIKVDSSGAEG 304
G I +IRQ SGA IK+ + AEG
Sbjct: 236 GSKISEIRQMSGAHIKIGNQ-AEG 258
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 124/285 (43%), Gaps = 76/285 (26%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GSNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD----------SSG 301
+LRLV PA G +IGK G IK+IR+ +GA ++V +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVT 151
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQ-------PRCSEKTERESG----------- 343
G I + ++ I +Q P K ++ SG
Sbjct: 152 VSGVPDAIILCVRQICA----VILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 207
Query: 344 ---DPVITT---RILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
DP T LVP+ IGC+IGR G+ ISE+R + A I+I
Sbjct: 208 PGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 252
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 41/272 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEG 99
+ ++L P GSIIGKGG V +L+S+T S I++S E PG +RIVT+Y ++
Sbjct: 2 NITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTA-- 59
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGCVI 156
P+ F + + D GE + V++++P GC+I
Sbjct: 60 ------------PSILGAFHLMISKLVRD-------GEGLVGGRPHVKLVIPNASCGCII 100
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
G+GG I+N +++A+I++ EH+ L ++ + +L + G V +A+ +A+ L ++
Sbjct: 101 GRGGATIRNFADDSQAEIKLSSQEHM-LPGVN-ERVLTITGANDRVLRAIALVATALSQD 158
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE-------ASAREFSLRLVCP 269
+ L S + Y G+ + P G +++A + S+ + P
Sbjct: 159 GCYEE---LISRPSTYTIDGMPM--PYSGINNDFAAAVNHNVEHGRSQDGDVISVAIDVP 213
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+IG V+GKGG I +I+ SG IKV G
Sbjct: 214 DEHIGAVLGKGGRTISEIQITSGIRIKVSERG 245
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 23/167 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-- 319
+L+ + P G +IGKGG + +++ ++G+ I++ S E +F TK+
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQL-SRATE-----VFPGTKDRIVTVY 56
Query: 320 -PSPTITAALRLQPRCSEKTERES-----GDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+P+I A L K R+ G P + ++++P+A GC+IGRGGA I
Sbjct: 57 GTAPSILGAFHLM---ISKLVRDGEGLVGGRPHV--KLVIPNASCGCIIGRGGATIRNFA 111
Query: 374 SATRASIRILTNEN-VPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++A I++ + E+ +P V +E ++ ITG+ D A++ V L
Sbjct: 112 DDSQAEIKLSSQEHMLPGV---NERVLTITGANDRVLRAIALVATAL 155
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 48/382 (12%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI++S EG
Sbjct: 197 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEG-- 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + A+D+ DE I +++L + +G +IGK G+
Sbjct: 255 --------CSTACKIIMEIMQK-EAQDTKFTDE------IPLKILAHNNFVGRLIGKEGR 299
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN----- 216
++ I +T +I I + L L + + + V G KA +I ++ E+
Sbjct: 300 NLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSIETCGKAEEEIMKKIRESYESDL 357
Query: 217 --PSRSQHLLLSSSSNIY-----QSSGV----YLSAPLVGSYGNYSARRDEASAREFSLR 265
+ HLL + N +SG+ L P + NY +A ++
Sbjct: 358 SAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQQAETE--TVH 415
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSPTI 324
L PA +G +IGK G IKQ+ + +GASIK+ + + ++ I+ P
Sbjct: 416 LFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMVIITG-----PPEAQF 470
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 471 KAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VV 529
Query: 384 TNENVPKVAYEDEEMVQITGSL 405
+ +P DE +V+ITG
Sbjct: 530 PRDQIPD--ENDEVIVKITGHF 549
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+ LR++ P +G +IGK G I+ I +++ + I + +++GA I S
Sbjct: 197 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASP---- 252
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
E S + + + ++ T+ P+ +IL + +G LIG+ G + ++ T
Sbjct: 253 EGCSTACKIIMEIMQKEAQDTKFTDEIPL---KILAHNNFVGRLIGKEGRNLKKIEQDTD 309
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I + + Y E + + GS++ A ++ ++R
Sbjct: 310 TKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIR 350
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 134/313 (42%), Gaps = 65/313 (20%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG--------TNLFE 104
+++GSIIGK G+ +K+ R E+ + I IS+ C ERIVT+ S+E FE
Sbjct: 83 KEVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGSTEAILKAFSLIARKFE 140
Query: 105 DSGEFVS-PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
+ + P Q + + L +T+R++VPA Q G +IGKGG I
Sbjct: 141 EMLSLLCLPVQTVGPTLQELQSNGSHLPKPP------VTLRLIVPASQCGSLIGKGGSKI 194
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T A I++ E LP S + + V+G + K + QI + E+P + +
Sbjct: 195 KEIREVTGASIQV-ASEMLP---NSTERAVTVSGTAEAITKCIYQICCVMMESPPKGATI 250
Query: 224 ----------LLSSSSNIYQSSGVYL---------------SAPLVG--SYGNYSARRDE 256
++ + Y G Y APL+ S G + +
Sbjct: 251 PYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPLLPGHSVGAINPQALA 310
Query: 257 ASAREFSLR-----------------LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
A A +LR + P IG +IGKGG I +IRQ SGA+IK+ +
Sbjct: 311 ALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISN 370
Query: 300 SGAEGDDCIIFIS 312
S D + IS
Sbjct: 371 SEEGSKDRTVTIS 383
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 37/178 (20%)
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
D+ A D G +TVR+++ ++G +IGK G I+ R E+ A+I I D P
Sbjct: 63 DTKALD--GPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINI-SDGSCP---- 115
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI------YQSSGVYLSA 241
+ ++ V G + KA IA + E S LL + QS+G +L
Sbjct: 116 --ERIVTVTGSTEAILKAFSLIARKFEEMLS----LLCLPVQTVGPTLQELQSNGSHLPK 169
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P V +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 170 PPV------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 209
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE------GDDCIIF---- 310
++RL+ +G +IGK G IK+ R+ESGA I + D S E G I
Sbjct: 74 LTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILKAFS 133
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAI 368
+ ++F E S + P E S P +T R++VP++Q G LIG+GG+
Sbjct: 134 LIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSK 193
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
I E+R T ASI++ +E +P E V ++G+ + + + Q+
Sbjct: 194 IKEIREVTGASIQV-ASEMLPN---STERAVTVSGTAEAITKCIYQI 236
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 73/238 (30%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-----------TVPGCDERI---- 90
R + P + GS+IGKGG +K++R T ++I+++ TV G E I
Sbjct: 174 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITKCI 233
Query: 91 -----VTIYSSSEGTNL------------------FEDSGEFVSPAQDALFRVHDRIVAE 127
V + S +G + + G++ P D L ++H +
Sbjct: 234 YQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPD-LTKLHQLALQH 292
Query: 128 DSL-------ADDEFGELTLITV--------------------RMLVPADQIGCVIGKGG 160
L A + L T M +P D IGC+IGKGG
Sbjct: 293 APLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGG 352
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA--LVQIASRLHEN 216
I IR + A I+I E S D + ++G P + A L+ + LH+N
Sbjct: 353 SKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN 405
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 182/410 (44%), Gaps = 58/410 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ +++ + + + G E+ +TIY + E
Sbjct: 146 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPENCT 205
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A ++ D V + A GE+TL ++L + IG +IGKGG
Sbjct: 206 -------------NACKKILD--VMQQEAASTNKGEITL---KILAHNNLIGRIIGKGGN 247
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T ++I + + D + + + + ++ V G + KA I+S+L +EN
Sbjct: 248 TIKRIMQDTDSKITVSSIND----INSFNLERIITVKGTIENMSKAESMISSKLRQSYEN 303
Query: 217 ------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRD--EASAR 260
P ++S++ Y S G+Y S P Y + + AS
Sbjct: 304 DLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDT 363
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 364 QETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIIG 421
Query: 321 SPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
SP + + Q EK E + D +T ILVPS Q+G +IG+GG + E++
Sbjct: 422 SPE--SQWKAQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRV 479
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
T + I++ + P A E+E V I G SA R+RA +
Sbjct: 480 TGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSA----QRRIRAMVLQ 524
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 188/429 (43%), Gaps = 79/429 (18%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 204 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 260
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 261 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 303
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 304 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 359
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQ----------SSGVYLSAPLVGSYGNYSARRDE 256
++I +L E + L ++ +N+ S+G+ + P G G A
Sbjct: 360 IEIMKKLREA-FENDMLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYH 418
Query: 257 ASA------------REFS-------------LRLVCPAGNIGGVIGKGGGIIKQIRQES 291
A +FS + L P +G +IGK G IKQ+ + +
Sbjct: 419 PFATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 478
Query: 292 GASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-I 347
GASIK+ + AEG D ++ I+ P A R+ + E+ + V +
Sbjct: 479 GASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKL 531
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLD 406
I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 532 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGHFF 587
Query: 407 VASSALSQV 415
+ +A ++
Sbjct: 588 ASQTAQRKI 596
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 88/190 (46%), Gaps = 20/190 (10%)
Query: 242 PLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
P G++S+R +A +F LR++ P +G +IGK G IK I +++ +
Sbjct: 187 PQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 246
Query: 294 SIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTR 350
+ + ++SGA I + E S L + + +++T+ P+ +
Sbjct: 247 RVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL---K 299
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++ ++
Sbjct: 300 ILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACAN 357
Query: 411 ALSQVTLRLR 420
A ++ +LR
Sbjct: 358 AEIEIMKKLR 367
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 196/427 (45%), Gaps = 49/427 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 343 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 399
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 400 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 442
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 443 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 500
Query: 204 KALVQIASRL---HENPSRSQ----HLL----LSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
KA +I ++ +EN S HL+ L++ +SG + P G
Sbjct: 501 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSG--MPPPTSGPPSAMPP 558
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A + I
Sbjct: 559 YPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVII 618
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISE 371
T P A R+ + E+ + V + I VPS G +IG+GG ++E
Sbjct: 619 TG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNE 674
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFEREG 428
+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +++
Sbjct: 675 LQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--QQQK 729
Query: 429 ALAAHPP 435
AL + PP
Sbjct: 730 ALQSGPP 736
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 36/296 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGE--------YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
LI VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 134 KLI-----VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS--------SSSN----IYQSSGVYLSAPLVG 245
EP V KA+ I ++ E+P S L +S ++SN Y S L A
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAGA 244
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ G +A + A + + + + P +G ++GKGG + + ++ +GA I++ G
Sbjct: 245 AGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 300
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 404 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 460
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 461 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 503
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 504 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 559
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 560 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 616
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 617 YHPFATHSGYFSSLYPPHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 676
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 677 FAGASIKI--APAEGPDVSERMVIITGP-----PEAQFKAQGRIFGKLKEENFFNPKEEV 729
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 730 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 785
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 786 FFASQTAQRKI 796
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 385 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 444
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 445 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 498
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 499 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 555
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 556 ASAEIEIMKKLR 567
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 136/311 (43%), Gaps = 81/311 (26%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+TI +
Sbjct: 131 RLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGPT--------- 179
Query: 107 GEFVSPAQDALFRVHDRI---VAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGG 160
D +FR I + ED +A G +T +T+R+++PA Q G +IGKGG
Sbjct: 180 --------DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGG 231
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D L S + + ++G + + + I + + E+P +
Sbjct: 232 SKIKEIRETTGAQVQVAGD----LLPNSTEREVTISGSQDAIIQCVKLICTVILESPPKG 287
Query: 221 QHL----------LLSSSSNIYQSS-------------GVYLS----------------- 240
+ +L + + ++++S GV L
Sbjct: 288 ATIPYRPSPTPGTVLLAGNQVFEASDFGSHPLFSVAQGGVDLQQTYAVQSHYGIPHSELA 347
Query: 241 ------------APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
AP+ S EA+++ S L+ P IG +IG+ G I +IR
Sbjct: 348 KLHQLSMQQQGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIGRQGTKINEIR 407
Query: 289 QESGASIKVDS 299
Q SGA IK+ S
Sbjct: 408 QVSGAQIKIGS 418
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 40/169 (23%)
Query: 132 DDEFGELTL---ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALS 188
+ EFG+ + +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + C
Sbjct: 116 EQEFGDGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS----CP-- 169
Query: 189 FDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYG 248
+ ++ + G V +A I +L E+ L++ +N G S P V
Sbjct: 170 -ERIITITGPTDCVFRAFTMITFKLEED-------LMALVAN-----GTVTSKPPV---- 212
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 213 --------------TLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQV 247
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK 314
D A +LRL+ +G +IGK G +K+IR+ES A I + S G+ + I
Sbjct: 121 DGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINI-SEGSCPERIITITGPT 179
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+ IT L + P +T R+++P++Q G LIG+GG+ I E+R
Sbjct: 180 DCVFRAFTMITFKLEEDLMALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRE 239
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
T A +++ + +P E V I+GS D
Sbjct: 240 TTGAQVQV-AGDLLPN---STEREVTISGSQD 267
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 194/432 (44%), Gaps = 58/432 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQASPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 TGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 337
Query: 204 KALVQIASRL---HENPSRSQ----HLL---------LSSSSNIYQSSGVYLSAPLVGSY 247
KA +I ++ +EN S HL+ L ++ + L Y
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 398 PQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 451
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 452 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 507
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANT 423
++E++S + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 508 KTVNELQSLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH- 563
Query: 424 FEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 -QQQKALQSGPP 574
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L ++IGSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST-------- 70
Query: 106 SGEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
DA+FR I E+ L D T +T+R+++PA Q G +IGK G I
Sbjct: 71 ---------DAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKI 121
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR + AQ+++ D L S + + V+G P + + + QI + + E+P +
Sbjct: 122 REIRESSGAQVQVAGD----LLPNSTERAVTVSGVPDTIIQCVRQICAVILESPPK 173
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 41/157 (26%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+RML+ +IG +IGK G+ ++ IR ++ A+I I + C + + + G
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS----CP---ERITTITGSTD 71
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V +A+ IA +L E+ G+ +A A
Sbjct: 72 AVFRAVSMIAFKLEED------------------------------LGDGTA----AGRT 97
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G I++IR+ SGA ++V
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV 134
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
S R+ + +LR++ IG +IGK G +K+IR++S A I + I
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTIT 67
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
ST F S A +L+ + T +G +T R+++P++Q G LIG+ G I
Sbjct: 68 GSTDAVFRAVS---MIAFKLEEDLGDGTA--AGRTPVTLRLVIPASQCGSLIGKAGTKIR 122
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
E+R ++ A +++ + +P E V ++G D + Q+
Sbjct: 123 EIRESSGAQVQV-AGDLLPN---STERAVTVSGVPDTIIQCVRQI 163
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 181/397 (45%), Gaps = 56/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E
Sbjct: 187 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENCT 246
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A ++ + V ++ GE+TL ++L + IG +IGKGG
Sbjct: 247 -------------NACKKILE--VMHQEASNTNKGEITL---KILAHNNLIGRIIGKGGN 288
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T +I + + D + + + + ++ V G + KA I+++L +EN
Sbjct: 289 TIKRIMQDTDTKITVSSIND----INSFNLERIITVKGSIENMSKAEAMISNKLRQSYEN 344
Query: 217 ------------PSRSQHLLLSSSSNIYQSSG--VYLSAPLVGSY-GNYSARRD--EASA 259
P ++S++S Y S G +Y + P Y N + ++ + A
Sbjct: 345 DLQAMAPQSMMFPGLHPMAMMSTASMGYNSRGPALYGTGPAPYPYQSNLTPQQGVLTSDA 404
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
+E + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 405 QETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLESDKPAEQQTERKVTIV 461
Query: 320 PSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
SP + + Q EK E + D +T ILVPSAQ+G +IG+GG + E++
Sbjct: 462 GSPE--SQWKAQYLIFEKMREEGFVSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQR 519
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
T + I++ + P A ++E V I G SA
Sbjct: 520 VTGSVIKLSEQQATPPTA-DEETTVHIIGPFFSVQSA 555
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 41/164 (25%)
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
G T +R+LV +D +G +IG+ G I+ I TRA++ + + ++L S ++ + +
Sbjct: 183 GRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLG----SLEKAITI 238
Query: 196 AGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
G P A +I +H+ S +
Sbjct: 239 YGNPENCTNACKKILEVMHQEASNT----------------------------------- 263
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+ E +L+++ IG +IGKGG IK+I Q++ I V S
Sbjct: 264 --NKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSS 305
>gi|296089737|emb|CBI39556.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
L+ + G + E+ S T +I IL+ EN+ +VA +D+EMVQI G L+VAS+ L Q+TLRL+
Sbjct: 94 LLIKMGPFVYEVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLK 153
Query: 421 ANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGR 462
AN F REG A P L Y+P+ S+ G R + R
Sbjct: 154 ANLFGREGVTTAFPSTLLYLPIVKHTPKKSRNGPRSMEHCQR 195
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 198/429 (46%), Gaps = 49/429 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQ----HLL----LSSSSNIYQSSGVY--LSAPLVGSYGNY 250
KA +I ++ +EN S HL+ L++ +SG+ S P Y
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPY 397
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
S+ ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 398 PHNSFTRSSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMV 457
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAII 369
I T P A R+ + E+ + V + I VPS G +IG+GG +
Sbjct: 458 IITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTV 513
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFER 426
+E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + ++
Sbjct: 514 NELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--QQ 568
Query: 427 EGALAAHPP 435
+ AL + PP
Sbjct: 569 QKALQSGPP 577
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 132/287 (45%), Gaps = 51/287 (17%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARRD----------------------EA 257
S ++ V LSA + G YG ++ +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDP 237
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A+ S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ T S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 162 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 218
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 219 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 261
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 262 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 317
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 318 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 374
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 375 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 434
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 435 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 487
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 488 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 543
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 544 FFASQTAQRKI 554
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 143 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 202
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 203 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 256
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 257 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 313
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 314 ANAEIEIMKKLR 325
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L ++ +N+ G+ LSA
Sbjct: 276 VEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPTGPRGAPPAPP 332
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 333 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 392
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 393 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 445
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 446 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 501
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 502 FFASQTAQRKI 512
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 272 ANAEVEIMKKLR 283
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 24/284 (8%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGE--------YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 133
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
LI VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 134 KLI-----VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
EP V KA+ I ++ E+P S L +S ++ + +A + G +A + A
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTAAAGAAGGFLTAEKLAA 244
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ + + + P +G ++GKGG + + ++ +GA I++ G
Sbjct: 245 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 288
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 89/308 (28%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA-------- 210
GG I+ IR T AQ+++ D + S + + +AG P + + + QI
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 211 -----------------------------------------SRLHENPSRSQHLLLSSSS 229
++LH+ + H ++ +
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ SG+ S+P V Y A D ++ + + L P IG +IG+ G I +IRQ
Sbjct: 232 TGF--SGIESSSPEVKGYW---ASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQ 284
Query: 290 ESGASIKV 297
SGA IK+
Sbjct: 285 MSGAQIKI 292
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 32/208 (15%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------------- 65
Query: 113 AQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG I+ I
Sbjct: 66 --DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL- 225
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 124 RESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 226 --SSSSNIYQSSGVYLSAPLVGSYGNYS 251
+S+ + + G + PL S N S
Sbjct: 180 PKPASTPVIFAGGQVRADPLAASTANLS 207
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 45/284 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 ----------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAR 260
+L S++ + G Y LS V + S +
Sbjct: 181 PYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQ 240
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 193/432 (44%), Gaps = 58/432 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQASPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 TGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHLL-------------LSSSSNIYQSSGVYLSAPLVGSY 247
KA +I ++ +EN S +L L ++ + L Y
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQANLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 398 PQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 451
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 452 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 507
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANT 423
++E++S + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 508 KTVNELQSLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH- 563
Query: 424 FEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 -QQQKALQSGPP 574
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 126 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L ++ +N+ G+ LSA
Sbjct: 282 VEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPTGPRGAPPAPP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 107 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 166
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 167 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 220
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 221 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 277
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 278 ANAEVEIMKKLR 289
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 38/262 (14%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F + T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA---------SRLHENPS 218
T I++ E LP S + + ++G + + + QI S + +NP
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPL 189
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS-AREFSLRLVCPAGNIGGVI 277
S L + N + G+ +A L G+ + A+ A++ + IG +I
Sbjct: 190 ASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANAANRAQQQQHEMTVSNDLIGCII 249
Query: 278 GKGGGIIKQIRQESGASIKVDS 299
GKGG I +IRQ SGA I++ +
Sbjct: 250 GKGGTKIAEIRQISGAMIRISN 271
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I + S G+ +
Sbjct: 9 SAGGTSIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCPE 66
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ T IT + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 67 RIVTVSGTTNAIFSAFTLITK--KFEEWCSQFNDAGKIGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 81/212 (38%), Gaps = 46/212 (21%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
IG R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 IGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E------------------------------------GTNLFEDSGEFVSPAQDALFRVH 121
E G N G + A AL
Sbjct: 162 EQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQ 221
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
R + A + E+T V D IGC+IGKGG I IR + A IRI E
Sbjct: 222 LRTANAANRAQQQQHEMT-------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE 274
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+ D + ++G P V A I R+
Sbjct: 275 RE--GGNTDRTITISGNPDSVALAQYLINMRI 304
>gi|254566093|ref|XP_002490157.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|238029953|emb|CAY67876.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|328350558|emb|CCA36958.1| RNA-binding protein rnc1 [Komagataella pastoris CBS 7435]
Length = 379
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 40/281 (14%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYS 95
Q+ + + +R+L R+ G+IIGK G + +R +SE V GC +RI+TI
Sbjct: 92 QKDVSNTLITHRFLVSKREAGTIIGKEGSCITSIRMGCDVKAGVSELVRGCVDRILTISG 151
Query: 96 SSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE------LTLITVRMLVPA 149
S E A+ R+ +V + + +F + + +R+L+P
Sbjct: 152 SVENVG-------------RAVGRLAQVLVDTAAFSQLDFAPSGGTSVMGVTRIRLLIPN 198
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
Q+G +IGK G I+ ++ ++ KD PL A S + +++V G P + A V I
Sbjct: 199 TQMGALIGKRGIRIRALQQYHSVKMVASKD---PL-ANSTERVVEVQGTPLAIESAAVTI 254
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL----- 264
+ L E+ +L ++ IY Y+SAP G G A ++ SL
Sbjct: 255 SKCLLED------FMLPAADTIY-----YVSAPPAGYGGAARATTGDSFLNSDSLGPTST 303
Query: 265 -RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ P +G +IGK G I++IR+ SG +I +DS+ G
Sbjct: 304 ETVYFPGELVGAIIGKRGVRIQEIRKLSGCAISIDSANTTG 344
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + +A+
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 25/176 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L ++IGSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST-------- 70
Query: 106 SGEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
DA+FR I E+ L D T +T+R+++PA Q G +IGK G I
Sbjct: 71 ---------DAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKI 121
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR + AQ+++ D L S + + V+G P + + + QI + + E+P +
Sbjct: 122 REIRESSGAQVQVAGD----LLPNSTERAVTVSGVPDTIIQCVRQICAVILESPPK 173
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 41/157 (26%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+RML+ +IG +IGK G+ ++ IR ++ A+I I + C + + + G
Sbjct: 19 LTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS----CP---ERITTITGSTD 71
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V +A+ IA +L E+ G+ +A A
Sbjct: 72 AVFRAVSMIAFKLEED------------------------------LGDGTA----AGRT 97
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G I++IR+ SGA ++V
Sbjct: 98 PVTLRLVIPASQCGSLIGKAGTKIREIRESSGAQVQV 134
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
S R+ + +LR++ IG +IGK G +K+IR++S A I + I
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTIT 67
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
ST F S A +L+ + T +G +T R+++P++Q G LIG+ G I
Sbjct: 68 GSTDAVFRAVS---MIAFKLEEDLGDGTA--AGRTPVTLRLVIPASQCGSLIGKAGTKIR 122
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
E+R ++ A +++ + +P E V ++G D + Q+
Sbjct: 123 EIRESSGAQVQV-AGDLLPN---STERAVTVSGVPDTIIQCVRQI 163
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 276 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 332
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 333 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 392
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 393 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 445
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 446 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 501
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 502 FFASQTAQRKI 512
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 272 ASAEIEIMKKLR 283
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 276 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 332
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 333 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 392
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 393 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 445
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 446 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 501
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 502 FFASQTAQRKI 512
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 272 ASAEIEIMKKLR 283
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 32/229 (13%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 67
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 68 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 119
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ +R T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 120 SKIKEMRESTGAQVQVAGD----MLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKG 175
Query: 221 QHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
+ +S+ + S G + PL S N S SLR
Sbjct: 176 ATIPYRPKPASTPVIFSGGQVRADPLAASAANLSLLLQHQPLPVSSLRF 224
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 37/171 (21%)
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
E S E G +T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P
Sbjct: 2 EPSKVQSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP--- 57
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGS 246
+ ++ + G + KA IA + E+ ++ S
Sbjct: 58 ---ERIVTITGPTDAIFKAFAMIAYKFEED--------------------------IINS 88
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
N A S +LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 89 MSNSPA----TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I EMR +T A ++
Sbjct: 76 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQ 134
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ + + Q+ + +
Sbjct: 135 V-AGDMLPN---STERAVTISGTPEAIIQCVKQICVVM 168
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 126 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 282 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 107 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 166
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 167 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 220
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 221 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 277
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 278 ASAEIEIMKKLR 289
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 45/284 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 ----------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAR 260
+L S++ + G Y LS V + A+
Sbjct: 181 PYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQ 240
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 120 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 176
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 177 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 219
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 220 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 275
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 276 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 332
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 333 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLAR 392
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 393 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 445
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 446 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 501
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 502 FFASQTAQRKI 512
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 101 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 160
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 161 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 214
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 215 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 271
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 272 ASAEIEIMKKLR 283
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 127/281 (45%), Gaps = 51/281 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ G
Sbjct: 27 KEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST---------GAVFHA 75
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
F++ + + G ++ +T+R+++PA Q G +IGK G I+ IR T
Sbjct: 76 VSMIAFKLDEDLCT----GPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETT 131
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
AQ+++ D L S + + V+G P + + QI + + E+P + + S +
Sbjct: 132 GAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLS 187
Query: 231 IYQSSGVYLSA----PLVGSYGNYSARRD----------------------EASAREFSL 264
+ V LSA + G YG + + SA+ S
Sbjct: 188 L---GTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSVVPGLDPSAQTSSQ 244
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
+ P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEGS 284
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 100
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 101 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 152
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 153 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 207
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 101
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 102 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 131
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 132 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 168
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 108
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 109 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 167
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + + E V I+G+ D + Q+ + +
Sbjct: 168 VAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 201
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 126 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 282 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 107 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 166
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 167 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 220
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 221 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 277
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 278 ASAEIEIMKKLR 289
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 126 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 282 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 107 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 166
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 167 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 220
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 221 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 277
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 278 ASAEIEIMKKLR 289
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 182/398 (45%), Gaps = 42/398 (10%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ +++ + + + G E+ +TIY + + T
Sbjct: 142 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPDNCT 201
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL-ITVRMLVPADQIGCVIGKG 159
N + E + + + +D E S +DD + IT+++L + IG +IGKG
Sbjct: 202 NACKKILEVMQQEANNTNKGYD----EGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKG 257
Query: 160 GQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---H 214
G I+ I +T +I + + D + + + + ++ V G + KA I+S+L +
Sbjct: 258 GNTIKRIMQDTDTKITVSSIND----INSFNLERIITVKGTIENMSKAESMISSKLRQSY 313
Query: 215 EN------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRD--EAS 258
EN P ++S++ Y S G+Y S P Y + + AS
Sbjct: 314 ENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLQTQQGVPAS 373
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+ + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 374 DTQETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTI 431
Query: 319 DPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + + Q EK E + D +T ILVPSAQ+G +IG+GG + E++
Sbjct: 432 VGSPE--SQWKAQYLIFEKMREEGYVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQ 489
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
T + I++ + P A ++E V I G SA
Sbjct: 490 RVTGSVIKLSEQQATPPSA-DEETTVHIIGPFFSVQSA 526
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 185/431 (42%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 116 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 172
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 173 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 215
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 216 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGAVEACASAE 271
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L + +N+ G+ LSA
Sbjct: 272 VEIMKKLREA-FENDMLAVHQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPTAP 328
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 329 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 388
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 389 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 441
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 442 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 497
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 498 FFASQTAQRKI 508
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 248 GNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-- 297
G++S+R +A +F LR++ P +G +IGK G IK I +++ + + +
Sbjct: 105 GDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHR 164
Query: 298 -DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
++SGA I + E S L + + +++T+ P+ +IL +
Sbjct: 165 KENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL---KILAHNG 217
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+G LIG+ G + ++ T I I + +++ Y E + + G+++ +SA ++
Sbjct: 218 LVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGAVEACASAEVEIM 275
Query: 417 LRLRANTFEREGALAAH 433
+LR FE + LA H
Sbjct: 276 KKLR-EAFEND-MLAVH 290
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 48 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 96
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 97 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 148
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 149 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 203
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 97
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 98 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 127
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 128 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 164
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 30 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 89
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 90 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 148
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + + E V I+G+ D + Q+ + +
Sbjct: 149 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 197
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + + E V I+G+ D + Q+ + +
Sbjct: 165 VAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 198
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 239 LSAPLVGSYGNYSARRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
LS P +G RR E+ E ++RL+ +G +IGK G +K++R+ESG
Sbjct: 21 LSHPPQPQFG----RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESG 76
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRIL 352
A I + I T F+ + I S + P +T R++
Sbjct: 77 ARINISEGNCPERIVTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLV 135
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
VP++Q G LIG+GG+ I E+R +T A +++ + + E V I+G+ D +
Sbjct: 136 VPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCV 191
Query: 413 SQVTLRL 419
Q+ + +
Sbjct: 192 KQICVVM 198
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L ++ +N+ G+ LSA
Sbjct: 339 VEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 335 ANAEVEIMKKLR-EAFEND 352
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + + E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 198
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 165 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 165 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 100
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 101 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 152
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 153 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 207
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 101
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 102 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 131
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 132 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 168
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 108
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 109 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 167
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 168 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 201
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Query: 17 SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
SD+A + S P D+ G D V+R + P+ K+GSIIG+ G+++K++ ET++
Sbjct: 56 SDSAAHEPSNHTGPSDKKWPGWPG--DCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG 136
IR+ + G +R+V I E E +SPA DA+ RV R V+ S +DE
Sbjct: 114 IRVLDGAVGTPDRVVLISGKEE----LESP---LSPAMDAVIRVFKR-VSGLSENEDE-A 164
Query: 137 ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSF 189
+ + ++R+LV + Q +IGK G +I++I+ T A +R+L L L
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGMLSFSVLCL 217
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 71/124 (57%), Gaps = 3/124 (2%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SP 322
RL+ P +G +IG+ G +IK++ +E+ A I+V D ++ IS KE E P SP
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 323 TITAALRLQPRCS--EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
+ A +R+ R S + E E+ + R+LV S Q LIG+ G++I ++ +T AS+
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 381 RILT 384
R+L+
Sbjct: 203 RVLS 206
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 39/161 (24%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE-HLP--LCALSFDELLQVAGEPA 200
R++VP ++G +IG+ G +I+ + ETRA+IR+L P + +S E L+ PA
Sbjct: 84 RLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSPA 143
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ A++++ R+ SG+ S DEA A
Sbjct: 144 M--DAVIRVFKRV---------------------SGL-------------SENEDEAKAS 167
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S+RL+ + +IGK G +IK I++ +GAS++V S G
Sbjct: 168 FCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGG 208
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 238 SRQGSPGSASKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 294
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 295 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 337
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + + G
Sbjct: 338 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITIKGNVETCA 395
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSAR- 253
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 396 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMT 452
Query: 254 ----RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 453 PPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 512
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 513 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 568
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFE 425
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +
Sbjct: 569 VNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--Q 623
Query: 426 REGALAAHPP 435
++ AL + PP
Sbjct: 624 QQKALQSGPP 633
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 131/259 (50%), Gaps = 36/259 (13%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQD 115
G IIGK G ++Q+R E+ +NI +S + G ERI+ I +S S +
Sbjct: 18 GGIIGKEGRNIRQMRDESGANINVSGST-GV-ERILNIKGTS-------------SEVKS 62
Query: 116 ALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIR 175
A+ V +++ S +++E+ + +T+R+LVP Q G +IGKGGQ I+ IR + A I
Sbjct: 63 AVRMVAEKLQEILSGSNNEY--VPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASGATIT 120
Query: 176 ILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY-QS 234
I E LP S + + +AG P + + +I E P+R ++ N+Y +S
Sbjct: 121 I-PSETLP---GSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQY--FPNMYPRS 174
Query: 235 SGVYLSAPLVG--SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
G + + + G S+ S RR E R P+ IG +IGKGG I +IRQ SG
Sbjct: 175 MGPHQLSVMSGQLSFTGLS-RRSEQKVR-------LPSNVIGSLIGKGGCHINEIRQFSG 226
Query: 293 ASIKVDSSGAEG--DDCII 309
A++ V+ S + D II
Sbjct: 227 ATVHVEESKKDNRMSDVII 245
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 12/132 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ L + + + GG+IGK G I+Q+R ESGA+I V SG+ G + I+ I +
Sbjct: 5 KLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINV--SGSTGVERILNI------KGT 56
Query: 321 SPTITAALRLQPRCSEKTERESGD---PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
S + +A+R+ ++ S + P +T R+LVP++Q G LIG+GG I E+R A+
Sbjct: 57 SSEVKSAVRMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASG 116
Query: 378 ASIRILTNENVP 389
A+I I +E +P
Sbjct: 117 ATITI-PSETLP 127
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEGTNL 102
R L P + G +IGKGG+ +K++R + + I I SET+PG ER VT+ S E L
Sbjct: 86 VTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGL 145
Query: 103 -----FEDSGEFVSPAQDALF--RVHDRIVAEDSLADDEFGELTLITV------RMLVPA 149
++ EF + + + ++ R + L+ G+L+ + ++ +P+
Sbjct: 146 CIAKIWDIFEEFPARQNNVQYFPNMYPRSMGPHQLSVMS-GQLSFTGLSRRSEQKVRLPS 204
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+ IG +IGKGG I IR + A + + KD + + +AG P V A
Sbjct: 205 NVIGSLIGKGGCHINEIRQFSGATVHVEESKKDNRM--------SDVIIAGTPEAVSCAT 256
Query: 207 VQIASRL 213
I +R+
Sbjct: 257 FLINARI 263
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 202/430 (46%), Gaps = 53/430 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSAR- 253
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 338 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMT 394
Query: 254 ----RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 395 PPYPQFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 455 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 510
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFE 425
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +
Sbjct: 511 VNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--Q 565
Query: 426 REGALAAHPP 435
++ AL + PP
Sbjct: 566 QQKALQSGPP 575
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 151/361 (41%), Gaps = 88/361 (24%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGST-------- 68
Query: 106 SGEFVSPAQDALFRVHDRI---VAEDSLADDEFG---ELTLITVRMLVPADQIGCVIGKG 159
A+F I + ED G +T+R+++PA Q G +IGK
Sbjct: 69 ---------GAVFHAVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKA 119
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I+ IR T AQ+++ D L S + + V+G P + + QI + + E+P +
Sbjct: 120 GAKIKEIRESTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPK 175
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE-ASAREFSLRLVCPAGNIGGVIG 278
+ S ++ V LS N + ++ E S R++
Sbjct: 176 GATIPYHPSLSL---GTVLLS---TNQVANIAIQKQERGSNRQY---------------- 213
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
Q+ SG K+ +G E + ++ P P +P+ S K
Sbjct: 214 ------HQVEHGSGQPGKLRGNGQEA----VEVAAVSMGPLPPP--------EPKVS-KL 254
Query: 339 ERESGDPVITT-----------------RILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
++ SG PV T LVP+ IGC+IGR G+ ISE+R + A I+
Sbjct: 255 QQLSGPPVPFTSPSVVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 314
Query: 382 I 382
I
Sbjct: 315 I 315
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 17 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFHAVS 76
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ GA I E+R +T A
Sbjct: 77 ---MIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQ 133
Query: 380 IRI 382
+++
Sbjct: 134 VQV 136
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 182 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 238
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 239 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 281
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 282 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 337
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 338 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 394
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 395 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 454
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 455 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 507
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 508 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 563
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 564 FFASQTAQRKI 574
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 163 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 222
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 223 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 276
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 277 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 333
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 334 ASAEIEIMKKLR-EAFEND 351
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 115 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 171
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 172 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 214
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 215 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 270
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L ++ +N+ G+ LSA
Sbjct: 271 VEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 327
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 328 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 387
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 388 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 440
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 441 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 496
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 497 FFASQTAQRKI 507
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+ P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 96 TPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 155
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 156 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 209
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 210 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 266
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 267 ANAEVEIMKKLR 278
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 89/308 (28%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK +R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIITLAGPT--------- 64
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 65 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 114
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA-------- 210
GG I+ IR T AQ+++ D + S + + +AG P + + + QI
Sbjct: 115 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 170
Query: 211 -----------------------------------------SRLHENPSRSQHLLLSSSS 229
++LH+ + H ++ +
Sbjct: 171 QSPPKGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 230
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ SG+ S+P V Y A D ASA+ S L P IG +IG+ G I +IRQ
Sbjct: 231 TGF--SGIESSSPEV---KGYWAGLD-ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 284
Query: 290 ESGASIKV 297
SGA IK+
Sbjct: 285 MSGAQIKI 292
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K +R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEGNCPERIITLAGPTNAIFKAFA 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 73 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 131
Query: 382 I 382
+
Sbjct: 132 V 132
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + + E V I+G+ D + Q+ + +
Sbjct: 133 VAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 166
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGASQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACATAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGASQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLR 420
++A ++ +LR
Sbjct: 335 ATAEIEIMKKLR 346
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIFQCVKQICVVMLESPPK 172
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 51/209 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD----------SSGAEGDDCIIF 310
+LRLV PA G +IGKGG IK+IR+ +GA ++V + G IF
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIF 156
Query: 311 ISTKE----FFEDPSPTITAALRLQPRCS 335
K+ E P T R +P C+
Sbjct: 157 QCVKQICVVMLESPPKGATIPYRPKPACT 185
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIFQCVKQICVVM 166
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ + S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------ITNSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSMSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALPSGPP 574
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 57 LRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 112
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + + A+ +T+R+++PA Q G +IGK G I+
Sbjct: 113 VSMIA-------FKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 163
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 164 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 219
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + A+
Sbjct: 220 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTS 279
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 280 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 320
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 37/175 (21%)
Query: 123 RIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
R+ + D+ ++E +T+RML+ ++G +IGK G+ ++ IR ++ A+I I +
Sbjct: 37 RMSSSDAGLEEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGS-- 94
Query: 183 PLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP 242
C + + + G A V A+ IA +L E+ L S+ +N G +S P
Sbjct: 95 --CP---ERITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN-----GGTVSRP 137
Query: 243 LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
V +LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 138 PV------------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 174
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 55 LTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 114
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + CS + P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 115 ---MIAFKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 171
Query: 380 IRI 382
+++
Sbjct: 172 VQV 174
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 83/313 (26%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+TI ++E
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGATE------- 57
Query: 106 SGEFVSPAQDALFRVHDRI---VAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKG 159
+FR I + ED A G +T +T+R+++PA Q G +IGKG
Sbjct: 58 ----------CVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKG 107
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I+ IR +T AQ+++ D L S + + ++G + + + I + + E+P +
Sbjct: 108 GSKIKEIREKTGAQVQVAGD----LLPNSTERGVTISGSQDAIIQCVKLICTVILESPPK 163
Query: 220 SQHL----------LLSSSSNIYQSSGVYLSAPL-------------------------- 243
+ +L + + ++++S + S PL
Sbjct: 164 GATIPYRPSPAPGAVLLAGNQVFETSE-FASHPLFSVAQGGLDLQQAYTVQNQYGIPHSE 222
Query: 244 ------------VGSYGNYSARR-----DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
+G +A + E+S++ S L+ P IG +IG+ G I +
Sbjct: 223 LAKLHQLSMQQGLGPIAQATATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQGTKINE 282
Query: 287 IRQESGASIKVDS 299
IRQ SGA IK+ S
Sbjct: 283 IRQVSGAQIKIGS 295
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + C + ++ + G
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS----CP---ERIITITGATE 57
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V +A I +L E+ L + +N G S P V
Sbjct: 58 CVFRAFTMITIKLEED-------LAALVAN-----GTVTSKPPV---------------- 89
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+++GA ++V
Sbjct: 90 --TLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQV 124
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LRL+ +G +IGK G +K+IR+ES A I + S G+ + I E
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINI-SEGSCPERIITITGATECVFRAF 63
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
IT L + P +T R+++P++Q G LIG+GG+ I E+R T A ++
Sbjct: 64 TMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQ 123
Query: 382 ILTNENVPKVAYEDEEMVQITGSLD 406
+ + +P E V I+GS D
Sbjct: 124 V-AGDLLPN---STERGVTISGSQD 144
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 335 ANAEIEIMKKLR-EAFEND 352
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 184/416 (44%), Gaps = 76/416 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT- 249
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E LA++ I +++L +G +IGK G+
Sbjct: 250 ---------SEACRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGR 293
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I ET +I I L+D L + + + V G A ++I +L E
Sbjct: 294 NLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAEIEIMKKLREA-FE 348
Query: 220 SQHLLLSSSSNI-----YQSSGVYLS-------------APLVGSYGNYSARRDEASA-- 259
+ L ++ +N+ + G++ + AP Y ++ S+
Sbjct: 349 NDMLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFATHSGYFSSLY 408
Query: 260 --REFS-------------LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+FS + L P +G +IGK G IKQ+ + +GASIK+ + AEG
Sbjct: 409 PHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEG 466
Query: 305 DDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGC 360
D ++ I+ P A R+ + E+ + V + I VPS+ G
Sbjct: 467 PDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 521
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+IG+GG ++E+++ T A + I+ + P E+EE +V+I G + +A ++
Sbjct: 522 VIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 573
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV-PGCDERIVTIYSSSEGT 100
E + P + +G+IIGK G +KQL ++I+I+ P ER+V I E
Sbjct: 424 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE-- 481
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 482 ---------------AQFKAQGRIFGK--LKEENFFNPKEEVKLEAHIRVPSSTAGRVIG 524
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 525 KGGKTVNELQNLTSAEVIVPRDQ 547
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 240 SAPLVGSYGNYSARRD------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
S P G++S+R +A +F LR++ P +G +IGK G IK I +++ +
Sbjct: 164 SPPQRAQRGDHSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 223
Query: 294 SIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTR 350
+ + ++SGA I + E S L + + +++T+ P+ +
Sbjct: 224 RVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL---K 276
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++ ++
Sbjct: 277 ILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACAN 334
Query: 411 ALSQVTLRLRANTFERE 427
A ++ +LR FE +
Sbjct: 335 AEIEIMKKLR-EAFEND 350
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 181/421 (42%), Gaps = 83/421 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 48 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 104
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 105 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 147
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 148 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 203
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
V+I +L E + L ++ +N+ G+ LSA
Sbjct: 204 VEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 260
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 261 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 320
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 321 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 373
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 374 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 429
Query: 405 L 405
Sbjct: 430 F 430
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 29 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 88
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 89 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 142
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 143 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 199
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 200 ANAEVEIMKKLR-EAFEND 217
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 62 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 110
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 111 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 162
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 163 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 217
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 111
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 112 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 141
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 142 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 178
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 118
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 119 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 177
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 178 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 211
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSISKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSAR- 253
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 338 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMT 394
Query: 254 ----RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 395 PPYPQFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 455 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 510
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFE 425
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +
Sbjct: 511 VNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--Q 565
Query: 426 REGALAAHPP 435
++ AL + PP
Sbjct: 566 QQKALQSGPP 575
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 181 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 237
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 238 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 280
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 281 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACANAE 336
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 337 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 393
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 394 YHPFATHSGYFSSLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 453
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 454 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 506
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 507 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 562
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 563 FFASQTAQRKI 573
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 162 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 221
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 222 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 275
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 276 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 332
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 333 ANAEIEIMKKLR-EAFEND 350
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 74 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 122
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 123 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 174
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 175 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 229
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 59/205 (28%)
Query: 115 DALFRVHDRIVAEDSLADDEFGELT----------------------LITVRMLVPADQI 152
D L R D + A L D G L+ +T+R+L+ ++
Sbjct: 23 DHLLRWGDTLWAPSILPHDVIGVLSQRPQPHFGRRMESKVSEGGLNVTLTIRLLMHGKEV 82
Query: 153 GCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
G +IGK G+ ++ +R E+ A+I I + C + ++ + G + KA IA +
Sbjct: 83 GSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTDAIFKAFAMIAYK 135
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGN 272
E+ ++ S N A S +LRLV PA
Sbjct: 136 FEED--------------------------IINSMSNSPA----TSKPPVTLRLVVPASQ 165
Query: 273 IGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 166 CGSLIGKGGSKIKEIRESTGAQVQV 190
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 56 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 115
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 116 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 174
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + + E V I+G+ D + Q+ + +
Sbjct: 175 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 223
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 185/440 (42%), Gaps = 79/440 (17%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P + +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 101 GICNEDI----RVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSR 156
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT-----VRMLVPADQI 152
E N + E V L V+ R +E + G + V +++P ++
Sbjct: 157 EAVNRAK---ELV------LSIVNQRSRSEGIGDMNMGGGGGGMMGHPGFVEIMIPGPKV 207
Query: 153 GCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
G +IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A +
Sbjct: 208 GLIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEHAKQLVY-- 261
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR--DEASAREFSLRLVCPA 270
L+ ++ G P GNY+ + A + ++ P
Sbjct: 262 ---------ELIAEKEMQMFHRGGRGSERP-----GNYTNDNGFNHGPANNDGVEVLVPR 307
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTI 324
+G VIGKGG +IK+I+ ESGA ++ +G C++ + ++ + I
Sbjct: 308 AAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLLSGKHQAVEQARQRIQELI 367
Query: 325 TAALR----------------------LQPRCSEKTERESGDPV---ITTRILVPSAQIG 359
+ +R P +R G P+ I T VPS++ G
Sbjct: 368 DSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEYGSWDRRQGGPMQDKIETTFTVPSSKCG 427
Query: 360 CLIGRGGAIISEMRSATRASI----RILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+IG+GG I ++ T A R +NEN K+ Q+ + + S L V
Sbjct: 428 IIIGKGGETIKQINQQTGAHCELDRRNQSNENE-KIFIIRGNPEQVEHAKRIFSEKLGMV 486
Query: 416 TLRLRANTFEREGALAAHPP 435
L + +T E LA H P
Sbjct: 487 CLMMFVST---EVLLAPHIP 503
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 168 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 224
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 225 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 267
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 268 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 325
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 326 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 384
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 385 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 438
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 439 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 494
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 495 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 551
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 552 --QQQKALQSGPP 562
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 51/287 (17%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + + A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCS----ATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARRD----------------------EA 257
S ++ V LSA + G YG + +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGMVPGLDP 237
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A+ S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 85/172 (49%), Gaps = 37/172 (21%)
Query: 126 AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
+ D+ ++E G +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C
Sbjct: 3 SSDAGLEEEPGLSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----C 58
Query: 186 ALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVG 245
+ + + G A V A+ IA +L E+ L S+++N G +S P V
Sbjct: 59 P---ERITTITGSTAAVFHAVSMIAFKLDED-------LCSATAN-----GGNISRPPV- 102
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRLQPRCSEKTER--ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L T P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 126 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 282 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEEKFFTPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 107 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 166
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 167 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 220
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 221 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 277
Query: 409 SSALSQVTLRLR 420
+SA ++ +LR
Sbjct: 278 ASAEIEIMKKLR 289
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSISKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 23 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 79
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 80 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 122
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 123 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 180
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 181 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 239
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 240 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 293
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 294 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 349
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 350 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 406
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 407 --QQQKALQSGPP 417
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 129/284 (45%), Gaps = 45/284 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 ----------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAR 260
+L S++ + G Y LS V + +
Sbjct: 181 PYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQ 240
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 636 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 692
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 693 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 735
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 736 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACACAE 791
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 792 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 848
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 849 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 908
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 909 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 961
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 962 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 1017
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 1018 FFASQTAQRKI 1028
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 21/197 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 617 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 676
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 677 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 730
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 731 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEAC 787
Query: 409 SSALSQVTLRLRANTFE 425
+ A ++ +LR FE
Sbjct: 788 ACAEIEIMKKLR-EAFE 803
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 134/308 (43%), Gaps = 83/308 (26%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T L+T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P + + + I + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKHICVVMLESPP 171
Query: 219 RSQHLLL----SSSSNIYQ------SSGVYLSAPLVGSY--------------------- 247
+ + SSS I+ S+G + + G Y
Sbjct: 172 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDKAYTIQGQYAIPQPDLTKLHQLAVQQSHFP 231
Query: 248 ---GN---------------YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
GN Y A D ASA+ S L P IG +IG G I +I Q
Sbjct: 232 MTHGNTGFSGIESSSPEVKGYWAGLD-ASAQTTSHELTIPNDLIGCIIGCQGAKINEICQ 290
Query: 290 ESGASIKV 297
SGA IK+
Sbjct: 291 MSGALIKI 298
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S PLV
Sbjct: 67 AIFKAFAMIIDKLEEDISSSM------------TNSTAASRPLV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCPERIITLAGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P++T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 93 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 149
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 150 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 192
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 193 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 250
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 251 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 309
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 310 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 363
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 364 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 419
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 420 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 476
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 477 --QQQKALQSGPP 487
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 169 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 225
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 226 KPVTIHATPEGT----------SEACRMILEIMQKEAEETKLAEE-------IPLKILAH 268
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 269 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACACAE 324
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 325 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 381
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 382 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 441
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 442 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 494
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 495 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 550
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 551 FFASQTAQRKI 561
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 88/192 (45%), Gaps = 20/192 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 150 SPPQRAQRGDHSSREQGNAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 209
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +E+T+ P+
Sbjct: 210 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEAEETKLAEEIPL-- 263
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 264 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 320
Query: 409 SSALSQVTLRLR 420
+ A ++ +LR
Sbjct: 321 ACAEIEIMKKLR 332
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 142/317 (44%), Gaps = 79/317 (24%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G+G T+ R L +++GSIIGK GE VK++R E+ + + ISE C ERI+TI S+
Sbjct: 11 GLGVTLTL-RLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST 67
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRI---VAEDSLADDEFGELT---LITVRMLVPADQ 151
D++FR I + ED A G ++ +T+R+++PA Q
Sbjct: 68 -----------------DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQ 110
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
G +IGKGG I+ IR T AQI++ D L S + + ++G V + + I +
Sbjct: 111 CGSLIGKGGAKIKEIRESTGAQIQVAGD----LLPNSTERGVTISGNQDSVIQCVKLICT 166
Query: 212 RLHEN----------PSRSQHLLLSSSSNIYQSS-------------GVYL--SAPLVGS 246
+ E+ PS S LL + + ++++S G+ L + L
Sbjct: 167 VILESPPKGATIPYRPSPSPAALLIAGNQVFEASEFAPHPLYSVAQGGLDLQQAYTLQNQ 226
Query: 247 YG----------------NYSARRDEASA--------REFSLRLVCPAGNIGGVIGKGGG 282
YG S ASA + S L+ P IG +IG+ G
Sbjct: 227 YGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELLIPNDLIGSIIGRQGT 286
Query: 283 IIKQIRQESGASIKVDS 299
I +IRQ SGA IK+ S
Sbjct: 287 KINEIRQVSGAQIKIGS 303
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LRL+ +G +IGK G +K+IR+ES A + + I ST F +
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVFRAFT 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
IT L S P +T R+++P++Q G LIG+GGA I E+R +T A I+
Sbjct: 76 -MITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQ 134
Query: 382 I 382
+
Sbjct: 135 V 135
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 192/421 (45%), Gaps = 64/421 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G+ ++ L +T S I I + G E+ +TI+S+ EG++
Sbjct: 194 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 253
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + + + + D +F E I +++LV + +G +IGK G+
Sbjct: 254 -------------NACRTIME--IMQKEAIDTKFTE--EIPLKILVHNNFVGRLIGKEGR 296
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G +A ++ ++ E
Sbjct: 297 NLKKIEQDTGTKITISSLQD----LTVYNPERTITVKGAIENCGRAEEEVMKKIREA-YE 351
Query: 220 SQHLLLSSSSNI-----YQSSGVYLSA-----------PLVGSYGNYSARRDEASAREFS 263
S ++ SN+ + G++ S P G++G YS + S +
Sbjct: 352 SDVAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSSLPPPGAHGGYSFGGNPESE---T 408
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD----CIIFISTKEFFED 319
+ L P +G +IGK G IKQ+ +GASIK+ + AEG D +I +
Sbjct: 409 VHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDPKHRMVIIVGP------ 460
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A
Sbjct: 461 PEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCA 520
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFEREGALAAHPP 435
+ ++ + P +D+ +V+I G +A + ++ ++R + + A A PP
Sbjct: 521 EV-VVPRDQTPD--EKDQVIVKIIGHFFACQLAQRKIQEILAQVRRQQ-QLKPAPGAQPP 576
Query: 436 V 436
+
Sbjct: 577 L 577
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 185/431 (42%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
+I +L E + L ++ +N+ G+ LSA
Sbjct: 339 AEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSMLPPPAGPRGAPPTAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA +++ +LR FE +
Sbjct: 335 ASAEAEIMKKLR-EAFEND 352
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 187/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E ++ +L+++ G+ LSA
Sbjct: 339 IEIMKKLRE---AFENDMLAANQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPP 395
Query: 242 --PLVGSYGNYSAR----------RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFATHSGYFSSLCPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 22/205 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFEREGALAAH 433
+SA ++ +LR FE + LAA+
Sbjct: 335 ASAEIEIMKKLR-EAFEND-MLAAN 357
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 114 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 170
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 171 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 213
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 214 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 269
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 270 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 326
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 327 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 386
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 387 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 439
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 440 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 495
Query: 405 LDVASSALSQV 415
+ +A +V
Sbjct: 496 FFASQTAQRKV 506
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 119 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 178
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 179 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 231
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T I I + +++ Y E + + G+++ ++A ++ +LR
Sbjct: 232 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR 277
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 92 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 140
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 141 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 192
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 193 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 247
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 141
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 142 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 171
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 172 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 208
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 82/176 (46%), Gaps = 11/176 (6%)
Query: 250 YSARRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
Y ++ E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 71 YFGKKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP 130
Query: 304 GDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
I T F+ + I S + P +T R++VP++Q G LIG
Sbjct: 131 ERIVTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIG 189
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+GG+ I E+R +T A +++ + +P E V I+G+ D + Q+ + +
Sbjct: 190 KGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 241
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 124/305 (40%), Gaps = 81/305 (26%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE----- 215
I+ IR T AQ+++ D + S + + ++G P + + + QI + E
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLEVQSKS 173
Query: 216 ---------NPSRSQHLLLSSSSNIYQSSGVYL--------------------------- 239
P + ++ + Y G Y
Sbjct: 174 PPRGVSRVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 233
Query: 240 -------SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
+ P V S AS E ++ P IG +IG+ G I +IRQ SG
Sbjct: 234 AFPGTDRAVPFVRSPWACLDASPPASTHELTI----PNDLIGCIIGRQGTKINEIRQMSG 289
Query: 293 ASIKV 297
A IK+
Sbjct: 290 AQIKI 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 193/431 (44%), Gaps = 58/431 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQASPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 TGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 337
Query: 204 KALVQIASRL---HENPSRSQ----HLL---------LSSSSNIYQSSGVYLSAPLVGSY 247
KA +I ++ +EN S HL+ L ++ + L Y
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 398 PQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 451
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 452 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 507
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANT 423
++E++S + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 508 KTVNELQSLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH- 563
Query: 424 FEREGALAAHP 434
+++ AL + P
Sbjct: 564 -QQQKALQSGP 573
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 174/369 (47%), Gaps = 49/369 (13%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPA 113
+G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT S A
Sbjct: 25 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT----------SEA 74
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
+ + + E LA++ I +++L +G +IGK G+ ++ I ET +
Sbjct: 75 CRMILEIMQKEADETKLAEE-------IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTK 127
Query: 174 IRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
I I L+D L + + + V G A ++I +L E ++ +L+ +++
Sbjct: 128 ITISSLQD----LSIYNPERTITVKGTVEACASAEIEIMKKLREA---FENDMLAVNTH- 179
Query: 232 YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
SG + S +G + + + + L P +G +IGK G IKQ+ + +
Sbjct: 180 ---SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 234
Query: 292 GASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-I 347
GASIK+ + AEG D ++ I+ P A R+ + E+ + V +
Sbjct: 235 GASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKL 287
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLD 406
I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 288 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGHFF 343
Query: 407 VASSALSQV 415
+ +A ++
Sbjct: 344 ASQTAQRKI 352
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV-PGCDERIVTIYSSSEGT 100
E + P + +G+IIGK G +KQL ++I+I+ P ER+V I E
Sbjct: 203 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE-- 260
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 261 ---------------AQFKAQGRIFGK--LKEENFFNPKEEVKLEAHIRVPSSTAGRVIG 303
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 304 KGGKTVNELQNLTSAEVIVPRDQ 326
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 34/284 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 206 TKRSNTGEEGE--------YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 257
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 258 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQA 317
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
LI VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 318 KLI-----VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINL----QERVVTVSG 368
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
EP V KA+ I ++ E+P S L + S +N+ + V S P Y +
Sbjct: 369 EPEQVHKAVSAIVQKVQEDPQSSSCLNI-SYANV--AGPVANSNPTGSPYAS-------P 418
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ P +G ++GKGG + + ++ +GA I++ G
Sbjct: 419 XXXXXXXXIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 462
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 216 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 275
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 276 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 330
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 331 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 385
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 197/428 (46%), Gaps = 50/428 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSLSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 337
Query: 204 KALVQIASRL---HENPSRSQ----HLLLSSSSN----IYQSSGVYLSAPLVGSYGNYSA 252
KA +I ++ +EN S HL+ + N +SG + P G +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNVQTHLIPGLNLNDLGLFPPTSG--MPPPTSGPPSAMTP 395
Query: 253 RRDEASAREF-SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A + I
Sbjct: 396 PYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVI 455
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIIS 370
T P A R+ + E+ + V + I VPS G +IG+GG ++
Sbjct: 456 ITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVN 511
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFERE 427
E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +++
Sbjct: 512 ELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--QQQ 566
Query: 428 GALAAHPP 435
AL + PP
Sbjct: 567 KALQSGPP 574
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 134/323 (41%), Gaps = 97/323 (30%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I+I E C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT-------LITVRMLVPADQIGCVIGKG 159
+A+F+ I+ + L +D +T L+T+R++VPA Q G +IGKG
Sbjct: 66 --------NAIFKAFAMIIYK--LEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKG 115
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
G I+ IR T AQ+++ D + S + + +AG P V K + QI + E
Sbjct: 116 GCKIKEIRKSTGAQVQVAGD----MLPNSTERAITIAGVPQSVTKCVKQICLVMLETLSH 171
Query: 217 --------------PSRS--------------------QHLLLSSSSNIYQSSGVYLSAP 242
PSRS H L + Y G + +P
Sbjct: 172 SPQGKVKTILYQPMPSRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 231
Query: 243 LVGSYGNYSARR----------------DEAS------------AREFSLRLVCPAGNIG 274
L + N AR+ D +S + + + L P IG
Sbjct: 232 LNLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQITHELTIPNNLIG 291
Query: 275 GVIGKGGGIIKQIRQESGASIKV 297
+IG+ G I +IRQ SGA IK+
Sbjct: 292 CIIGRQGTNINEIRQMSGAQIKI 314
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 38/164 (23%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I+IL+ C + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGN----CP---ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ N S
Sbjct: 60 TLTGPTNAIFKAFAMIIYKLEEDI-------------------------------NSSMT 88
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ A++R +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 89 KSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 132
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA IK+ EG+ C I T P+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKI----LEGN-CPERIIT---LTGPT 65
Query: 322 PTITAALRL------QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
I A + + S T+ + ++T R++VP+ Q G LIG+GG I E+R +
Sbjct: 66 NAIFKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKS 125
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHP 434
T A +++ + +P E + I G + + Q+ L L + +G +
Sbjct: 126 TGAQVQV-AGDMLPN---STERAITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVK--- 178
Query: 435 PVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
+ Y PM + + G +D S G +AT +L P D+Y G
Sbjct: 179 -TILYQPMP-SRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 66/300 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERIVT +F+
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVT--XXXXXXXIFKAF 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ + I+ +S+++ +T+R++VPA Q G +IGKGG I+ +
Sbjct: 75 AMIA-------YKFEEDII--NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL- 225
R T AQ+++ D + S + + ++G P + + + QI + E+P + +
Sbjct: 126 RESTGAQVQVAGD----MLPNSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 226 --SSSSNIYQSSGVYLSAPLVGSYGNYSARRD---------------------------- 255
+S+ + S G + PL S N S
Sbjct: 182 PKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAM 241
Query: 256 ------------------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+AS + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 242 QQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 301
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R++SGA I + S G + +
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI-SEGNCPERIVTXXXXXXXIFKAF 74
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I EMR +T A ++
Sbjct: 75 AMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQ 134
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ + + Q+ + +
Sbjct: 135 V-AGDMLPN---STERAVTISGAPEAIIQCVKQICVVM 168
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R ++ A+I I + + P + ++
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI-SEGNCP------ERIVTXXXXXX 68
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 69 XIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK++R+ +GA ++V
Sbjct: 99 PVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV 135
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 195/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG +Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVFKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALPSGPP 574
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 133
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA----------SRLHE 215
IR T AQ+++ D L S + + V+G P + + QI + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILGSPPKGATIPY 182
Query: 216 NPSRSQHLLLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+PS S +L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 161/380 (42%), Gaps = 69/380 (18%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P + +G IIG+GGE + +L++ET I+++ G ER+ T+ S E N
Sbjct: 107 VPDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPERVCTLTGSREAVNR------- 159
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLIT------VRMLVPADQIGCVIGKGGQVI 163
A++ + + ++ + + D V +++P ++G +IGKGG+ I
Sbjct: 160 ---AKELVLSIVNQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETI 216
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ ++ ++ A++ ++++ + ++ L++ G+P V A + + E + H
Sbjct: 217 KQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEIQMFH- 271
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
G + G+Y N S + A + ++ P +G VIGKGG +
Sbjct: 272 -----------RGGRGATDRTGNYSNDSGF-NHGPANSDGVEVLVPRAAVGVVIGKGGDM 319
Query: 284 IKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTITAALR-------- 329
IK+I+ ESGA ++ EG C++ + ++ + I + +R
Sbjct: 320 IKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQARQRIQELIDSVMRRDDGRNNM 379
Query: 330 ---------------LQPRCSEKTERESGDPV---ITTRILVPSAQIGCLIGRGGAIISE 371
P +R G P+ I T VPS++ G +IG+GG I +
Sbjct: 380 GGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIETTFTVPSSKCGIIIGKGGETIKQ 439
Query: 372 MRSATRASI----RILTNEN 387
+ T A R +NEN
Sbjct: 440 INQQTGAHCELDRRNQSNEN 459
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I + +
Sbjct: 199 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 258
Query: 107 GEFVSPAQDALFR-----VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
E ++ + +F DR + + G V +LVP +G VIGKGG
Sbjct: 259 YELIAEKEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVEVLVPRAAVGVVIGKGGD 318
Query: 162 VIQNIRTETRAQIRILKD-EHLP---LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+I+ I+ E+ A+++ + E P C LS +A+ Q R+ E
Sbjct: 319 MIKKIQAESGAKVQFQQGREEGPGDRKCLLSGK------------HQAVEQARQRIQE-- 364
Query: 218 SRSQHLLLSS---SSNIYQSSGVYLSAPL---------VGSYGNYSARRDEASAREFSLR 265
L+ S + + G S P YG + R+ +
Sbjct: 365 ------LIDSVMRRDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIETT 418
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
P+ G +IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 419 FTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFI 464
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 191/432 (44%), Gaps = 57/432 (13%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGS--KRRNPGDET--EQRGIGSE------DTVYRYLC 50
++G NY + + D N S R GD + EQ GS D R L
Sbjct: 72 LSGHQFENYSFKISYIPDEEVNSLSPPHRVQRGDHSSREQGHSGSSSQTRQIDFPLRILV 131
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 132 PTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT--------- 182
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S A + + + + LA++ + +++L +G +IGK G+ ++ I E
Sbjct: 183 -SEACRMILEIMQKEAEDTKLAEE-------VPLKILAHNGLVGRLIGKEGRNLKKIEHE 234
Query: 170 TRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
T +I I L+D L + + + V G A ++I +L E + L ++S
Sbjct: 235 TGTKITISSLQD----LSIYNPERTITVKGTIDACANAEMEIMKKLRE-AFENDMLAVNS 289
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
S + + + + +Y + ++ L P +G +IGK G IKQ+
Sbjct: 290 HSGYFPNMYPHHHFGPFPHHHSYPEQE--------TVNLFIPTQAVGAIIGKKGAHIKQL 341
Query: 288 RQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD 344
+ +GASIK+ + AEG D ++ I+ P A R+ + E+ +
Sbjct: 342 ARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKE 394
Query: 345 PV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
V + I VPS+ G +IG+GG ++E+++ T A + I+ + P E +V+I G
Sbjct: 395 EVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENAEVIVRIIG 451
Query: 404 SLDVASSALSQV 415
+ +A ++
Sbjct: 452 HFFASQTAQRKI 463
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 199/455 (43%), Gaps = 72/455 (15%)
Query: 17 SDAATNGGSKRRNPGDETEQ-------RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
+DA GG + NP Q R D R L P + +G+IIGK G ++ +
Sbjct: 161 ADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGATIRNI 220
Query: 70 RSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+T S I I + G E+ +T++S+ EG S A + + + +
Sbjct: 221 TKQTHSKIDIHRKENAGAAEKPITVHSTPEGC----------SSACRNIMEIMQKEAIDT 270
Query: 129 SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCA 186
+ ++ I +++L + +G +IGK G+ ++ I +T +I I L+D L
Sbjct: 271 KITEE-------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTL 319
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRL---HENPSRSQHLLLSSSSNI-----YQSSGVY 238
+ + + V G KA +I ++ +EN + HL SN+ + G++
Sbjct: 320 YNPERTITVKGTLDACAKAEEEIMKKVRESYENDVAAMHL----QSNLIPGLNLNALGLF 375
Query: 239 ------------LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
+S P G+ Y + + + ++ L PA +G +IGK G IKQ
Sbjct: 376 PGAASGGISPSVVSGPPPGAQAGYQSFGAQMESE--TVHLFIPALAVGAIIGKQGQHIKQ 433
Query: 287 IRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP 345
+ + +GASIK+ + G + ++ IS P A R+ + E+ +
Sbjct: 434 LSRFAGASIKIAPADGIDAKQRMVIISG-----PPEAQFKAQGRIFGKLKEENFFGPKEE 488
Query: 346 V-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
V + I VPS G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 489 VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGH 545
Query: 405 L---DVASSALSQVTLRLRANTFEREGALAAHPPV 436
+A + ++ ++R ++ AA PPV
Sbjct: 546 FYASQLAQRKIQEIISQVRRQ--QQPKPSAAGPPV 578
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 180 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 236
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 237 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 279
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 280 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 335
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 336 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 392
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 393 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 452
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 453 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 505
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 506 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 561
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 562 FFASQTAQRKI 572
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 185 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 244
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 245 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 297
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T I I + +++ Y E + + G+++ ++A ++ +LR FE +
Sbjct: 298 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR-EAFEND 349
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 176/396 (44%), Gaps = 54/396 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E
Sbjct: 120 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 179
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A ++ + V + + GE+TL ++L + IG +IGKGG
Sbjct: 180 -------------NACKKILE--VMQQEANNTNKGEITL---KILAHNNLIGRIIGKGGN 221
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T +I + + D + + + + ++ V G + KA I+S+L +EN
Sbjct: 222 TIKRIMQDTDTKITVSSIND----INSFNLERIITVKGSIDNMSKAESMISSKLRQSYEN 277
Query: 217 ------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRD--EASAR 260
P ++S++ Y S G+Y S P Y + + AS
Sbjct: 278 DLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDT 337
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 338 QETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIVG 395
Query: 321 SPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
SP + + Q EK E + D +T ILVPS Q+G +IG+GG + E++
Sbjct: 396 SPE--SQWKAQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRV 453
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
T + I++ + P A E+E V I G SA
Sbjct: 454 TGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSA 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--DDCIIFISTKEFFE 318
+F LR++ + +G +IG+ G I+QI Q + A + V G + I E
Sbjct: 120 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 179
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
+ I ++ + + K E IT +IL + IG +IG+GG I + T
Sbjct: 180 NACKKILEVMQQEANNTNKGE-------ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDT 232
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + ++ ++ E ++ + GS+D S A S ++ +LR + A+A + P
Sbjct: 233 KITVSSINDIN--SFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFP 290
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ T G Y +R
Sbjct: 291 GLHPMAMMSTAGMGYSSR 308
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 176/396 (44%), Gaps = 54/396 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCT 170
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A ++ + V + + GE+TL ++L + IG +IGKGG
Sbjct: 171 -------------NACKKILE--VMQQEANNTNKGEITL---KILAHNNLIGRIIGKGGN 212
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T +I + + D + + + + ++ V G + KA I+S+L +EN
Sbjct: 213 TIKRIMQDTDTKITVSSIND----INSFNLERIITVKGSIDNMSKAESMISSKLRQSYEN 268
Query: 217 ------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRD--EASAR 260
P ++S++ Y S G+Y S P Y + + AS
Sbjct: 269 DLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDT 328
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 329 QETTFLYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIVG 386
Query: 321 SPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
SP + + Q EK E + D +T ILVPS Q+G +IG+GG + E++
Sbjct: 387 SPE--SQWKAQYLIFEKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRV 444
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
T + I++ + P A E+E V I G SA
Sbjct: 445 TGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSA 479
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--DDCIIFISTKEFFE 318
+F LR++ + +G +IG+ G I+QI Q + A + V G + I E
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCT 170
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
+ I ++ + + K E IT +IL + IG +IG+GG I + T
Sbjct: 171 NACKKILEVMQQEANNTNKGE-------ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDT 223
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + ++ ++ E ++ + GS+D S A S ++ +LR + A+A + P
Sbjct: 224 KITVSSINDIN--SFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFP 281
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ T G Y +R
Sbjct: 282 GLHPMAMMSTAGMGYSSR 299
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 176 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 232
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 233 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 275
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 276 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 331
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 332 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 388
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 389 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 448
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 449 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 501
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 502 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 557
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 558 FFASQTAQRKI 568
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 181 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 240
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 241 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 293
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T I I + +++ Y E + + G+++ ++A ++ +LR FE +
Sbjct: 294 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR-EAFEND 345
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T L+T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + I + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKHICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S ++ S PLV
Sbjct: 67 AIFKAFAMIIDKLEEDISSSM------------TNSTAASRPLV---------------- 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 99 --TLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P++T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 25 SKRRNPGDETEQRGIGSEDTV----YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
S +NP +Q S+D + + LC + +V + RS T ++I +
Sbjct: 289 SASKNPPVTIKQPLQASKDDIRQVDLKILCS--------NESASVVIKTRSVTDASISVG 340
Query: 81 ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL 140
+ P CDER+VTI + FE + + S +Q AL V + + + G +
Sbjct: 341 DRHPDCDERLVTITA-------FEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSS 393
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
IT R++V ++QI C++G+ G++ I+ T A I +L E P C ++++Q++GE
Sbjct: 394 ITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFP 453
Query: 201 VVRKALVQIASRLHEN 216
VR+A+ Q+ S L E+
Sbjct: 454 NVREAINQVTSMLRED 469
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE--RIVTIY----- 94
E +R LC + + G +IGK G +VK+L T+S+I + +T P D RI+ I+
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKT-PLDDSPYRIIKIFGHVGS 86
Query: 95 -----------SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
+ S ++ VS AQ AL RV + + FG+ T TV
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEAL---------NFGDCTSSTV 137
Query: 144 --RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP-A 200
+L+ + VIGK G+++Q I ET ++ L+ L +C D +L++ G +
Sbjct: 138 SCNLLMEGSHVVTVIGKNGELMQRILEETGCNVQ-LRSHDLSICTNPGDVVLKIEGNRLS 196
Query: 201 VVRKALVQIASRLHENP 217
V KALV I+SRL P
Sbjct: 197 AVMKALVSISSRLQACP 213
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 33/251 (13%)
Query: 188 SFDELLQVAGEPAVVR---KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
S ++++ E A+VR + + Q +PS L+ S+S N V + PL
Sbjct: 248 SLHRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKN----PPVTIKQPL- 302
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A +D+ R+ L+++C + ++ + R + ASI V +
Sbjct: 303 ------QASKDDI--RQVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDC 346
Query: 305 DDCIIFISTKEFFEDPSPTITAALRL-----QPRCSEKTERESGDPVITTRILVPSAQIG 359
D+ ++ I+ E +D + AL L + K IT R++V S QI
Sbjct: 347 DERLVTITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQIN 406
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
CL+G G I + ++ T A I +L E PK E+ ++VQI+G A++QVT L
Sbjct: 407 CLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSML 466
Query: 420 RAN----TFER 426
R + +F+R
Sbjct: 467 REDLINQSFQR 477
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 187 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 243
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 244 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 286
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 287 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 342
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 343 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 399
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 400 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 459
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 460 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 512
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 513 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 568
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 569 FFASQTAQRKI 579
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 192 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 251
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 252 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 304
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T I I + +++ Y E + + G+++ ++A ++ +LR FE +
Sbjct: 305 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR-EAFEND 356
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 157/386 (40%), Gaps = 66/386 (17%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 79
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 80 FEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 137
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
I++ E LP S + + ++G +A+ Q IY
Sbjct: 138 SIQV-ASEMLPN---STERAVTISG----TSEAITQC---------------------IY 168
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
V L +P G+ Y P +GG + GG I+
Sbjct: 169 HICCVMLESPPKGATIPYR-----------------PKPQVGGPVILAGGQAYTIQGNYA 211
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---------QPRCSEKTERESG 343
D G G + + ++ +P T L Q R S ++
Sbjct: 212 VPAHSDM-GKLGSNPLASLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPA 270
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG
Sbjct: 271 ANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITG 328
Query: 404 SLDVASSA--LSQVTLRLRANTFERE 427
+ D + A L +++ L+ E +
Sbjct: 329 NPDAVALAQYLINMSVELQKANLEAQ 354
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
N D+ S ++RL+ +G +IGK G I+K+ R+ESGA I +
Sbjct: 3 NKPVLNDDPSV-TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVT 61
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD---------PVITTRILVPSAQIG 359
+ T F+ + + CS+ + + G P IT R++VP++Q G
Sbjct: 62 VTGPTNSIFKA---FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCG 118
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
LIG+GG+ I E+R T ASI++ +E +P E V I+G+ S A++Q +
Sbjct: 119 SLIGKGGSKIKEIREVTGASIQV-ASEMLPN---STERAVTISGT----SEAITQCIYHI 170
Query: 420 RANTFEREGALAAHPP---VLPYVP 441
E PP +PY P
Sbjct: 171 CCVMLE-------SPPKGATIPYRP 188
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSE 98
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +SE
Sbjct: 109 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 161
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 43/283 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + + A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 ---------LLSSSSNIY---QSSGVY---------LSAPLVGSYGNYSARRD-EASARE 261
LLS++ Q GV LS V +G+ S + A+
Sbjct: 183 HPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHAV-PFGSPSMVPGLDPGAQT 241
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 242 SSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L S+ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN-----GGTVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + CS + P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 157/386 (40%), Gaps = 71/386 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD-IQGSGGVPRPP------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
I++ D + S + + ++G +A+ Q IY
Sbjct: 136 SIQVASD----MLPNSTERAVTISG----TSEAITQC---------------------IY 166
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
V L +P G+ Y P +GG + GG I+
Sbjct: 167 HICCVMLESPPKGATIPYR-----------------PKPQVGGPVILAGGQAYTIQGNYA 209
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---------QPRCSEKTERESG 343
D G G + + ++ +P T L Q R S ++
Sbjct: 210 VPAHSDM-GKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPA 268
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG
Sbjct: 269 ANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITG 326
Query: 404 SLDVASSA--LSQVTLRLRANTFERE 427
+ D S A L +++ L+ E +
Sbjct: 327 NPDAVSLAQYLISMSVELQKANLEAQ 352
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + + P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ ++ + E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQVASD----MLPNSTERAVTISGT----SEAITQCIYHICCVMLE-------SPPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + ++ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DSMDSKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S+ + Q SG
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDI---------QGSGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ S+ +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 39/158 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S SS +N AS+R
Sbjct: 67 AIFKAFAMIIDKLEEDIS-------SSMTN------------------------STASSR 95
Query: 261 -EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S S P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H +S + + SGV S+P Y A D ASA+ S L P
Sbjct: 238 TKLHQLAMQQSHFPMSHGNTGF--SGVESSSP---DEKGYWAGLD-ASAQTTSHELTIPN 291
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 292 DLIGCIIGRQGAKINEIRQMSGAQIKI 318
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS S
Sbjct: 287 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAASISL 341
Query: 411 ALSQVTLRLRANT 423
A + +RL + T
Sbjct: 342 AQYLINVRLSSET 354
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 168/389 (43%), Gaps = 71/389 (18%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 106 GICNEDI----RVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSR 161
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT----VRMLVPADQIG 153
E N A++ + + ++ + + D L++ V +++P ++G
Sbjct: 162 EAVNR----------AKELVLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIPGPKVG 211
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A + +
Sbjct: 212 LIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYELI 267
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
E + H + G+Y N S+ + S + ++ P +
Sbjct: 268 AEKEMQMFHRGARGNDR-------------SGNYSNDSS-FNHGSGTTDGVEVLVPRAAV 313
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTITAA 327
G VIGKGG +IK+I+ E+GA ++ +G CI+ + ++ + I +
Sbjct: 314 GVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSV 373
Query: 328 LR----------------------LQPRCSEKTERESGDPV---ITTRILVPSAQIGCLI 362
+R P +R G P+ I T VPS++ G +I
Sbjct: 374 MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIII 433
Query: 363 GRGGAIISEMRSATRASI----RILTNEN 387
G+GG I ++ T A R +NEN
Sbjct: 434 GKGGETIKQINQQTGAHCELDRRNQSNEN 462
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSS 96
G+ S + P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I
Sbjct: 193 GLMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGD 252
Query: 97 SEGTNLFED-SGEFVSPAQDALF----RVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ + E ++ + +F R +DR + + G T V +LVP
Sbjct: 253 PQKVEYAKQLVYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAA 312
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
+G VIGKGG +I+ I+ ET A+++ + E P D V+G+ +A+ Q+
Sbjct: 313 VGVVIGKGGDMIKKIQAETGARVQFQQGREDGP-----GDRKCIVSGK----HQAVEQVR 363
Query: 211 SRLHENPSRSQHLLLSS-------SSNIYQSSGV----YLSAPLVGSYGNYSARRDEASA 259
R+ E L+ S SNI SG + + YG + R+
Sbjct: 364 QRIQE--------LIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQ 415
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+ P+ G +IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 416 DKIETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFI 467
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 8/174 (4%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D VYR + PL K+GSIIG+ GE+VK++ +T + IR+ E G +RIV I
Sbjct: 53 DNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGR------ 106
Query: 103 FEDSGEFVSPAQDALFRVHDRIVA-EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
ED VSPA DA+FRV R+ E + ++L+ + Q +IG+ G
Sbjct: 107 -EDPDAQVSPAMDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGS 165
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
I+ I+ + A +R+L ++ + A + + ++++ GE V A + +L +
Sbjct: 166 TIKEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRK 219
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 18/168 (10%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP---- 320
RLV P +G +IG+ G ++K++ +++GA I+V D I+ IS +E DP
Sbjct: 57 RLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGRE---DPDAQV 113
Query: 321 SPTITAALRLQPRCSEKTERESGDPV--------ITTRILVPSAQIGCLIGRGGAIISEM 372
SP + A R+ R + E GDP + ++L+ S+Q LIGR G+ I E+
Sbjct: 114 SPAMDAVFRVFKRVAG---LEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEI 170
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ + AS+R+L+ ++V A DE +V+I G A V +LR
Sbjct: 171 QERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLR 218
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 176 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 232
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 233 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 275
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 276 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTIEACASAE 331
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 332 MEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPSPP 388
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 389 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 448
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 449 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 501
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 502 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 557
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 558 FFASQTAQRKI 568
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 181 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 240
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 241 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 293
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T I I + +++ Y E + + G+++ +SA ++ +LR FE +
Sbjct: 294 EHETGTKITISSLQDLS--IYNPERTITVKGTIEACASAEMEIMKKLR-EAFEND 345
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 127 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 183
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 184 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 226
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 227 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 282
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 283 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 339
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 340 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 399
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 400 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 452
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 453 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 508
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 509 FFASQTAQRKI 519
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 132 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 191
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 192 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 244
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T I I + +++ Y E + + G+++ ++A ++ +LR
Sbjct: 245 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR 290
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 25 SKRRNPGDETEQRGIGSEDTV----YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
S +NP +Q S+D + + LC + +V + RS T ++I +
Sbjct: 293 SASKNPPVTIKQPLQASKDDIRQVDLKILCS--------NESASVVIKTRSVTDASISVG 344
Query: 81 ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL 140
+ P CDER+VTI + FE + + S +Q AL V + + + G +
Sbjct: 345 DRHPDCDERLVTITA-------FEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSS 397
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
IT R++V ++QI C++G+ G++ I+ T A I +L E P C ++++Q++GE
Sbjct: 398 ITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFP 457
Query: 201 VVRKALVQIASRLHEN 216
VR+A+ Q+ S L E+
Sbjct: 458 NVREAINQVTSMLRED 473
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 33/251 (13%)
Query: 188 SFDELLQVAGEPAVVR---KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
S ++++ E A+VR + + Q +PS L+ S+S N V + PL
Sbjct: 252 SLHRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKN----PPVTIKQPL- 306
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
A +D+ R+ L+++C + ++ + R + ASI V +
Sbjct: 307 ------QASKDDI--RQVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDC 350
Query: 305 DDCIIFISTKEFFEDPSPTITAALRL-----QPRCSEKTERESGDPVITTRILVPSAQIG 359
D+ ++ I+ E +D + AL L + K IT R++V S QI
Sbjct: 351 DERLVTITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQIN 410
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
CL+G G I + ++ T A I +L E PK E+ ++VQI+G A++QVT L
Sbjct: 411 CLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSML 470
Query: 420 RAN----TFER 426
R + +F+R
Sbjct: 471 REDLINQSFQR 481
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE--RIVTIY----- 94
E +R LC + + G +IGK G +VK+L T+S+I + +T P D RI+ I+
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKT-PLDDSPYRIIKIFGHVGS 86
Query: 95 -----------SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
+ S ++ VS AQ AL RV + + FG+ T TV
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEAL---------NFGDCTSSTV 137
Query: 144 --RMLVPADQIGCVIGKGGQVIQNIRTET 170
+L+ + VIGK G+++Q I ET
Sbjct: 138 SCNLLMEGSHVVTVIGKNGELMQRILEET 166
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 69/284 (24%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 94 VGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 151
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
++ E +G+ +P A + G +T T+ M+VP
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 194
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 195 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNP---TPEDKPLRISGEPARVEKARQAVL 251
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG D ++++
Sbjct: 252 VLINSR--DRPGGSMH------------------------YG-----YDGQETSQYAV-- 278
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 279 --PAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 320
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 293
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
IG +IG+ G I +IRQ SGA IK
Sbjct: 294 DLIGCIIGRQGAKINEIRQMSGAQIK 319
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 108 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 164
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 165 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 207
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 208 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTIEACASAE 263
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 264 MEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGAPPSPP 320
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 321 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 380
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 381 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 433
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 434 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 489
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 490 FFASQTAQRKI 500
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 113 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 172
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 173 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 225
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T I I + +++ Y E + + G+++ +SA ++ +LR
Sbjct: 226 EHETGTKITISSLQDLS--IYNPERTITVKGTIEACASAEMEIMKKLR 271
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 293
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 294 DLIGCIIGRQGAKINEIRQMSGAQIKI 320
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS S
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAASISL 343
Query: 411 ALSQVTLRLRANT 423
A + +RL + T
Sbjct: 344 AQYLINVRLSSET 356
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 180/418 (43%), Gaps = 73/418 (17%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGT 100
+D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 186 QDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGC 245
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
S A + + + A ++ ++E I +++L +G +IGK G
Sbjct: 246 ----------SSACRMILDIMQK-EANETKTNEE------IPLKILAHNSLVGRLIGKEG 288
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN---- 216
+ ++ I ET +I I + L +C + + + V G KA V+I +L E
Sbjct: 289 RNLKKIEEETGTKITISSLQDLTIC--NPERTITVKGSLEACCKAEVEIMKKLKEAYEND 346
Query: 217 -PSRSQHLLLSSSSNIYQ----SSGVYLSAPLVGSYGNYSA------------------- 252
+ +Q L N+ SSG+ + P GS G
Sbjct: 347 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPAGYNPFLSHSSHLSGL 406
Query: 253 -----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ + + + + L P +G +IGK G IKQ+ +GASIK+ +
Sbjct: 407 YGVPPTSAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--AP 464
Query: 302 AEGDDC----IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQ 357
AE D +I T E I L+ + S K E + + T I VPS+
Sbjct: 465 AESPDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEEVK-----LETHIKVPSSA 519
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E+++ T A + I+ + +P DE V+I+G + +A ++
Sbjct: 520 AGRVIGKGGKTVNELQNLTSAEV-IVPRDQIPD--ENDEVFVKISGHFFASQTAQRKI 574
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 16/184 (8%)
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--- 297
AP G G+YS+ R ++F LR++ P +G +IGK G IK + +++ + + +
Sbjct: 169 APQPGPSGSYSSPR--PRQQDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRK 226
Query: 298 DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG-DPVITTRILVPSA 356
+++GA + I ST E ++A R+ +K E+ + I +IL ++
Sbjct: 227 ENAGA-AEKPITIHSTPE-------GCSSACRMILDIMQKEANETKTNEEIPLKILAHNS 278
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+G LIG+ G + ++ T I I + +++ E + + GSL+ A ++
Sbjct: 279 LVGRLIGKEGRNLKKIEEETGTKITISSLQDL--TICNPERTITVKGSLEACCKAEVEIM 336
Query: 417 LRLR 420
+L+
Sbjct: 337 KKLK 340
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y +ASA+ S L P
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHELTIPN 292
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 293 DLIGCIIGRQGAKINEIRQMSGAQIKI 319
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S ++ + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRKSTGAQVQVAGD----MLPNSTEQAITIAGMPQSVTECVKQICLVMLETIS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E+ + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STEQAITIAGMPQSVTECVKQICLVMLETISQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 133
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H +S + + SG+ S+P V Y +ASA+ S L P
Sbjct: 238 TKLHQLAMQQSHFPMSHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHELTIPN 290
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 291 DLIGCIIGRQGAKINEIRQMSGAQIKI 317
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 69/284 (24%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 94 VGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 151
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
++ E +G+ +P A + G +T T+ M+VP
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 194
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 195 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE---DKPLRISGEPARVEKARQAVL 251
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG Y + A
Sbjct: 252 VLINSR--DRPGGSMH------------------------YG-YDGQETSQYA------- 277
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 278 -VPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 320
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H +S + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 238 TKLHQLAMQQSHFPMSHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 291
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 292 DLIGCIIGRQGAKINEIRQMSGAQIKI 318
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 77
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 78 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 127
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 128 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 183
Query: 219 R 219
+
Sbjct: 184 K 184
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 78
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 79 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 108
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 109 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 145
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 85
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 86 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 144
Query: 382 I 382
+
Sbjct: 145 V 145
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y +ASA+ S L P
Sbjct: 252 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHELTIPN 304
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 305 DLIGCIIGRQGAKINEIRQMSGAQIKI 331
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 195/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 200/429 (46%), Gaps = 53/429 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSAR- 253
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 338 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMT 394
Query: 254 ----RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 395 PPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 455 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 510
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFE 425
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +
Sbjct: 511 VNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--Q 565
Query: 426 REGALAAHP 434
++ AL + P
Sbjct: 566 QQKALQSGP 574
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 293
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 294 DLIGCIIGRQGAKINEIRQMSGAQIKI 320
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 65/301 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L P R G++IGKGGE +K+LR+E + + I ++ ERIVTI +E N+
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIV--AEIDNVIRCV 96
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
E + P D + D +DDE +R+LV G +IG+GG I+ +
Sbjct: 97 NEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKEL 147
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R ET Q+++ C S + ++Q+ G P + ++ I + L E P +
Sbjct: 148 REETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIP-------IK 196
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSARRD---------------EASAREF--------- 262
S Y+S ++ V YG + R+ A F
Sbjct: 197 GPSRPYES--MFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGMGM 254
Query: 263 ---------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ ++ P G +IGKGG I +IR+ESGA I V+ +
Sbjct: 255 GVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSERI 314
Query: 308 I 308
I
Sbjct: 315 I 315
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 35/244 (14%)
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG---------AEGDDCI 308
+A ++ LRL+ P+ G VIGKGG IK++R E A++ + S AE D+ I
Sbjct: 34 AAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEIDNVI 93
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAI 368
++ + P + L+ + E + R + R+LV + G +IGRGG
Sbjct: 94 RCVN------EIIPRLDECLKTRDSDDEGSARGESE----LRLLVHQSHAGAIIGRGGYR 143
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
I E+R T +++ + + P+ E ++QI G V ++ V L + N +
Sbjct: 144 IKELREETSTQLKVYS-QCCPQ---STERVIQIIG---VPEKIIACVILII--NMLKE-- 192
Query: 429 ALAAHPPVLPYVPMSLDITDGSKYG----NRDNQSRGRGNSYATGNLPGRDSYGSYGGSL 484
+ P PY M D +YG +R+ + G G LP R YGG
Sbjct: 193 -IPIKGPSRPYESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRG 251
Query: 485 SGGG 488
G G
Sbjct: 252 MGMG 255
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 66 --------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T +Q+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 118 SKIKEIRESTGSQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N +A S
Sbjct: 67 AIFKAFAMIAYKFEED--------------------------IINSMSNSTA----TSKP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +G+ ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQV 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T + ++
Sbjct: 74 -MIAYKFEEDIINSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 133 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 166
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 200/429 (46%), Gaps = 53/429 (12%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSA-- 252
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 338 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAIT 394
Query: 253 ---RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 395 PPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 455 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 510
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANTFE 425
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ + +
Sbjct: 511 VNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH--Q 565
Query: 426 REGALAAHP 434
++ AL + P
Sbjct: 566 QQKALQSGP 574
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 171/375 (45%), Gaps = 41/375 (10%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+G+IIG+GG ++QL +++ + + P + + G +F D G + +
Sbjct: 197 VGAIIGRGGANIRQLSQVSRARVELERRDP---------HLGAVGRRVFID-GSLNNTVE 246
Query: 115 DALFRVHDRIVAEDSLA----DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
FR +++A++ + + E + +++M++P + +G +IG+ G I+ I +
Sbjct: 247 --AFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETS 304
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
A I +L ++ +S ++++ G P + A + + RS ++
Sbjct: 305 GAGIELLPLQYP--ANMSPVRIVKIEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPPMM 362
Query: 231 IYQSSGVYL----SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
+ P V YG A ++R+ PA ++G +IG+GG IK
Sbjct: 363 GMMQQQQQQMPGMAPPYVPGYGPGPMMM--APVEVITVRV--PAWSVGALIGRGGSNIKH 418
Query: 287 IRQESGASIKVDSSGAEGD-----DCIIFISTKEFFEDPSPTITAALRLQPRCS-EKTER 340
+ +E+GA I++ +SG + + DC++ +T++ + Q R + T+
Sbjct: 419 MMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAHALIFRRMQDEQARLNIPPTDP 478
Query: 341 ESGD--PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
S D PV+ + VP+A++G +IGRGGA I +++ T + + NE P E
Sbjct: 479 RSNDLFPVV---MEVPAAKVGRVIGRGGATIRDIQQKTGVGVEVQQNEENP----EANAA 531
Query: 399 VQITGSLDVASSALS 413
V + GS +AL+
Sbjct: 532 VMLHGSYRSVQAALN 546
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P +G++IG+GG +K + ET + IRI + +E + E + + E
Sbjct: 400 VPAWSVGALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPL-------ERDCVVRGTTEQ 452
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
A +FR A ++ + L V M VPA ++G VIG+GG I++I+ +
Sbjct: 453 QVRAHALIFRRMQDEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATIRDIQQK 512
Query: 170 TRAQIRILKDEHLP 183
T + + ++E P
Sbjct: 513 TGVGVEVQQNEENP 526
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS----GAEGDDCIIFISTK 314
A F ++LV +G +IG+GG I+Q+ Q S A ++++ GA G I S
Sbjct: 183 ALPFPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVELERRDPHLGAVGRRVFIDGSLN 242
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
E + + + E+ D + + ++++P +G LIGR GA I +
Sbjct: 243 NTVEAFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITE 302
Query: 375 ATRASIRIL 383
+ A I +L
Sbjct: 303 TSGAGIELL 311
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 168/389 (43%), Gaps = 71/389 (18%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 106 GICNEDI----RVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSR 161
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT----VRMLVPADQIG 153
E N A++ + + ++ + + D +++ V +++P ++G
Sbjct: 162 EAVNR----------AKELVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIPGPKVG 211
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A + +
Sbjct: 212 LIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYELI 267
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
E + H + G+Y N S+ + S + ++ P +
Sbjct: 268 AEKEMQMFHRGARGNDR-------------SGNYSNDSS-FNHGSGTTDGVEVLVPRAAV 313
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTITAA 327
G VIGKGG +IK+I+ E+GA ++ +G CI+ + ++ + I +
Sbjct: 314 GVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSV 373
Query: 328 LR----------------------LQPRCSEKTERESGDPV---ITTRILVPSAQIGCLI 362
+R P +R G P+ I T VPS++ G +I
Sbjct: 374 MRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIII 433
Query: 363 GRGGAIISEMRSATRASI----RILTNEN 387
G+GG I ++ T A R +NEN
Sbjct: 434 GKGGETIKQINQQTGAHCELDRRNQSNEN 462
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSS 96
GI S + P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I
Sbjct: 193 GIMSHSGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGD 252
Query: 97 SEGTNLFED-SGEFVSPAQDALF----RVHDRIVAEDSLADDEFGELTLITVRMLVPADQ 151
+ + E ++ + +F R +DR + + G T V +LVP
Sbjct: 253 PQKVEYAKQLVYELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAA 312
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
+G VIGKGG +I+ I+ ET A+++ + E P D V+G+ +A+ Q+
Sbjct: 313 VGVVIGKGGDMIKKIQAETGARVQFQQGREDGP-----GDRKCIVSGK----HQAVEQVR 363
Query: 211 SRLHENPSRSQHLLLSS-------SSNIYQSSGV----YLSAPLVGSYGNYSARRDEASA 259
R+ E L+ S SNI SG + + YG + R+
Sbjct: 364 QRIQE--------LIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQ 415
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+ P+ G +IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 416 DKIETMFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFI 467
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 69/284 (24%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 94 VGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 151
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
++ E +G+ +P A + G +T T+ M+VP
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 194
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 195 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE---DKPLRISGEPARVEKARQAVL 251
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG Y + A
Sbjct: 252 VLINSR--DRPGGSMH------------------------YG-YDGQETSQYA------- 277
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 278 -VPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 320
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 190/424 (44%), Gaps = 58/424 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQTSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 TGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFER 426
++
Sbjct: 564 QQQK 567
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 157/386 (40%), Gaps = 71/386 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD-IQGSGGVPRPP------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
I++ D + S + + ++G +A+ Q IY
Sbjct: 136 SIQVASD----MLPNSTERAVTISG----TSEAITQC---------------------IY 166
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
V L +P G+ Y P +GG + GG I+
Sbjct: 167 HICCVMLESPPKGATIPYR-----------------PKPQVGGPVILAGGQAYTIQGNYA 209
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---------QPRCSEKTERESG 343
D G G + + ++ +P T L Q R S ++
Sbjct: 210 VPAHSDM-GKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPA 268
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG
Sbjct: 269 ANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITG 326
Query: 404 SLDVASSA--LSQVTLRLRANTFERE 427
+ D + A L +++ L+ E +
Sbjct: 327 NPDAVALAQYLISMSVELQKANLEAQ 352
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + + P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ ++ + E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQVASD----MLPNSTERAVTISGT----SEAITQCIYHICCVMLE-------SPPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + ++ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DSMDSKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S+ + Q SG
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDI---------QGSGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ S+ +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 157/386 (40%), Gaps = 71/386 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD-IQGSGGVPRPP------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
I++ D + S + + ++G +A+ Q IY
Sbjct: 136 SIQVASD----MLPNSTERAVTISG----TSEAITQC---------------------IY 166
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
V L +P G+ Y P +GG + GG I+
Sbjct: 167 HICCVMLESPPKGATIPYR-----------------PKPQVGGPVILAGGQAYTIQGNYA 209
Query: 293 ASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---------QPRCSEKTERESG 343
D G G + + ++ +P T L Q R S ++
Sbjct: 210 VPAHSDM-GKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPA 268
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG
Sbjct: 269 GNNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITG 326
Query: 404 SLDVASSA--LSQVTLRLRANTFERE 427
+ D + A L +++ L+ E +
Sbjct: 327 NPDAVALAQYLISMSVELQKANLEAQ 352
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + + P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ ++ + E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQVASD----MLPNSTERAVTISGT----SEAITQCIYHICCVMLE-------SPPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + ++ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DSMDSKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S+ + Q SG
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDI---------QGSGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ S+ +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 33/179 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESP 170
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 239 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 292
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 293 DLIGCIIGRQGAKINEIRQMSGAQIKI 319
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 177 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 225
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 226 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 275
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 276 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 331
Query: 219 RS 220
+S
Sbjct: 332 QS 333
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + + T F+ +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA 233
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 234 -MIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 292
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 293 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 344
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 345 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 386
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 167 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 219
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 220 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 252
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 253 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 293
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 37/207 (17%)
Query: 25 SKRRNPG---DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE 81
+ RR+P + + G+ T+ R L +++GSIIGK GE VK++R E+ + I ISE
Sbjct: 2 AARRSPWTPVNRVTESGLNVTLTI-RLLMHGKEVGSIIGKKGESVKRIREESGARINISE 60
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT-- 139
C ERI+T+ + +A+F+ I+ D L +D +T
Sbjct: 61 G--NCPERIITLTGPT-----------------NAIFKAFAMII--DKLEEDINSSMTNS 99
Query: 140 ------LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
+T+R++VPA Q G +IGKGG I+ IR T AQ+++ D + S + +
Sbjct: 100 TAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGD----MLPNSTERAI 155
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRS 220
+AG P V + + QI + E S+S
Sbjct: 156 TIAGVPQSVTECVKQICLVMLETLSQS 182
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 81
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 82 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 141
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 142 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 193
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 194 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 235
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 16 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 68
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 69 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 101
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 168/410 (40%), Gaps = 48/410 (11%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G++ E G Y P + +G +IG+GGE + +L++E+ I+I++ G +R+
Sbjct: 112 GNQDEFERPGQSSLSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSGGLPDRM 171
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
T+ + + + A+ + R+ +R +D G+ T+ +++P++
Sbjct: 172 CTLTGNPQA----------IERAKALIDRIIERGQGPAVGSDGGLGDGN-TTIELMIPSN 220
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG++I+ ++ ++ +++D + + D+ L+V+G+P + A +
Sbjct: 221 KVGLVIGKGGEMIKKLQERAGVKMVMIQDA---TTSGTSDKPLRVSGDPQKCKHARELVN 277
Query: 211 SRLHENPSRSQHLLLSSSSNIY-QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
+ + + + Y + G G+Y R ++ P
Sbjct: 278 ELIGDKDNPGMEMFGERMDGGYDRERDDDRDFERRGGRGDYGPRMGGPPGGGGGFEMLVP 337
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASI---------------------KVDSSGAEGDDCI 308
+G VIG+GG +IK+I+ E+GA I K+D + + D+ I
Sbjct: 338 RFAVGIVIGRGGDMIKKIQNETGARIQFRPDDGHSPERLAVISGSDDKIDHAREKIDELI 397
Query: 309 IFISTKEFFEDPSPTITAALRLQPR-------CSEKTERESGDPVITTRILVPSAQIGCL 361
K+ P D + +T VPS++ G +
Sbjct: 398 DSARQKDEQRRQGGGRDRGFGPPPHREGGRGGGGGGFRGGPPDRMDSTTFTVPSSKCGLV 457
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
IG+GG I + + A + + N P E++ I GS S A
Sbjct: 458 IGKGGETIRNINMQSGAHVELSRNLGPPG-----EKVFTIRGSPQQISCA 502
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 29/265 (10%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSE 98
+ T R+L GS+IGKGG + +S++ + I++S E PG +RI+ I S
Sbjct: 32 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMI---SG 88
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
TN E + + L ++ + ED D + VR++VP G +IGK
Sbjct: 89 ATN------EIIKAMELILAKLLSEMHTEDGDEADPRSK-----VRLIVPNSSCGGIIGK 137
Query: 159 GGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GG I++ +++A I+I + +L L D L+ + G +A+ I S+L E+
Sbjct: 138 GGSTIKSFIEDSQASIKISPQDNNYLGLT----DRLVTLMGSLEEQMRAIDLILSKLTED 193
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
P +Q + S Y ++ ++ G+ G + +++ R S+ + +IG V
Sbjct: 194 PHYTQFMNAPFS---YAAAYNSMNYGPNGAGGKFQNNKED---RSNSVTIGVADEHIGLV 247
Query: 277 IGKGGGIIKQIRQESGASIKVDSSG 301
+G+GG I I Q SGA IK+ G
Sbjct: 248 VGRGGRNIMDISQASGARIKISDRG 272
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 238 YLSAPLVGSYGNYSARRDEASAREFS--LRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
Y+S+P V + R + E S +R + G VIGKGG I + +SGA I
Sbjct: 8 YVSSPEVPPKRSSPPRSPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARI 67
Query: 296 KVDSSGAE----GDDCIIFIS--TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITT 349
++ S E D II IS T E + I A L + + E DP
Sbjct: 68 QL-SRNHEFFPGTSDRIIMISGATNEIIK-AMELILAKLLSEMHTEDGDE---ADPRSKV 122
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVAS 409
R++VP++ G +IG+GG+ I ++ASI+I +N + +V + GSL+
Sbjct: 123 RLIVPNSSCGGIIGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQM 180
Query: 410 SALSQVTLRL 419
A+ + +L
Sbjct: 181 RAIDLILSKL 190
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 69/284 (24%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 94 VGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 151
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
++ E +G+ +P A + G +T T+ M+VP
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 194
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 195 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPE---DKPLRISGEPARVEKARQAVL 251
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG Y + A
Sbjct: 252 VLINSR--DRPGGSMH------------------------YG-YDGQETSQYA------- 277
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 278 -VPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 320
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 65/291 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L P R G++IGKGGE +K+LR+E + + I ++ ERIVTI +E N+
Sbjct: 108 RLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIV--AEIDNVIRCV 163
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
E + P D + D +DDE +R+LV G +IG+GG I+ +
Sbjct: 164 NEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKEL 214
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R ET Q+++ C S + ++Q+ G P + ++ I + L E P +
Sbjct: 215 REETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIP-------IK 263
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSARRD---------------EASAREF--------- 262
S Y+S ++ V YG + R+ A F
Sbjct: 264 GPSRPYES--MFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGMGM 321
Query: 263 ---------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
+ ++ P G +IGKGG I +IR+ESGA I V+
Sbjct: 322 GVSPFPPAPFGGPMQTTQVTIPNELGGTIIGKGGERINRIREESGAHIVVE 372
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 108/248 (43%), Gaps = 35/248 (14%)
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG---------AEG 304
++ +A ++ LRL+ P+ G VIGKGG IK++R E A++ + S AE
Sbjct: 97 QEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTPERIVTIVAEI 156
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
D+ I ++ + P + L+ + E + R + R+LV + G +IGR
Sbjct: 157 DNVIRCVN------EIIPRLDECLKTRDSDDEGSARGESE----LRLLVHQSHAGAIIGR 206
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
GG I E+R T +++ + + P+ E ++QI G V ++ V L + N
Sbjct: 207 GGYRIKELREETSTQLKVYS-QCCPQ---STERVIQIIG---VPEKIIACVILII--NML 257
Query: 425 EREGALAAHPPVLPYVPMSLDITDGSKYG----NRDNQSRGRGNSYATGNLPGRDSYGSY 480
+ + P PY M D +YG +R+ + G G LP R Y
Sbjct: 258 KE---IPIKGPSRPYESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPY 314
Query: 481 GGSLSGGG 488
GG G G
Sbjct: 315 GGRGMGMG 322
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 188/445 (42%), Gaps = 94/445 (21%)
Query: 23 GGSKRRN---PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
GG R PG T+ + + D R L P + +G+IIGK G +K L +T+S + I
Sbjct: 251 GGHSREQGQYPGSSTQPKPL---DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI 307
Query: 80 S-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL 138
+ G E+ +TI+++ EG+ S A + + + E A++
Sbjct: 308 HRKENAGAAEKPITIHATPEGS----------SEACRLILEIMQKEADETKSAEE----- 352
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVA 196
I +++L +G +IGK G+ ++ I +T +I I L+D L + + + V
Sbjct: 353 --IPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQD----LTIYNPERTITVK 406
Query: 197 GEPAVVRKALVQIASRLHEN---------------------------------PSRS--Q 221
G A V+I +L E PS +
Sbjct: 407 GSIEACSNAEVEIMKKLREAYENDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPH 466
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL------RLVCPAGNIGG 275
+S N + S YLS G Y A R A + S+ L P +G
Sbjct: 467 GATAASPYNPFASHSPYLS-------GLYGASRVGAFPHQHSVPEQEVVNLFIPTQAVGA 519
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQP 332
+IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P A R+
Sbjct: 520 IIGKKGQHIKQLARFAGASIKI--APAEGPDASERMVIITG-----PPEAQFKAQGRIFG 572
Query: 333 RCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV 391
+ E+ + V + I VPS+ G +IG+GG ++E+++ T A + I+ + P
Sbjct: 573 KLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD- 630
Query: 392 AYEDEE-MVQITGSLDVASSALSQV 415
E+EE +V+I G + +A ++
Sbjct: 631 --ENEEVIVKIIGHFFASQTAQRKI 653
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEG 304
G Y + +F LR++ P +G +IGK G IK + +++ + + + +++GA
Sbjct: 258 GQYPGSSTQPKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAE 317
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
I + E S L + + +++T+ P+ +IL ++ +G LIG+
Sbjct: 318 KPITIHATP----EGSSEACRLILEIMQKEADETKSAEEIPL---KILAHNSLVGRLIGK 370
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G + ++ T I I +++ Y E + + GS++ S+A ++ +LR
Sbjct: 371 EGRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEVEIMKKLR 424
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 183/409 (44%), Gaps = 65/409 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +PG Q+ D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GPQRQGSPGATVRQKP--QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSTACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHEN-------PSRSQHLLLSSSSNIY------------QSSGVYLS 240
KA +I ++ E+ + HL+ + N + GV S
Sbjct: 335 ETCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPTVGV-AS 393
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
A SY + + + + + L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 394 AAAATSYPPFGQQPESET-----VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--A 446
Query: 301 GAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSA 356
AEG D ++ I+ P A R+ + E+ + V + I VPS
Sbjct: 447 PAEGPDAKLRVVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSY 501
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 502 AAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 112/469 (23%), Positives = 198/469 (42%), Gaps = 91/469 (19%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRG--------IGSEDTVYRYLCPL 52
++G NY R + D + + R + +RG D R L P
Sbjct: 44 LSGHQFENYSFRISYIPDEDGHAPQRFRRGASSSRERGRSPGGSGQAKPPDFPLRILVPT 103
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVS 111
+ +G+IIGK G +K L +T+S + I + G E+ VTI++S EG++
Sbjct: 104 QFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGSS---------- 153
Query: 112 PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+A R+ + + E DE + + +++L +G +IGK G+ ++ I +T
Sbjct: 154 ---EACRRILEIMQKE----ADETKAVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTG 206
Query: 172 AQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------------- 216
+I I L+D L + + + V G A V+I +L E
Sbjct: 207 TKITISPLQD----LTIYNPERTITVKGTIEACSSAEVEIMRKLREAYENDMLTVNQQGS 262
Query: 217 --------------------PSRSQHLLLSSSS-NIYQSSGVYLS----APLVGSYGNYS 251
PS + +++S N + S YLS AP +G + +
Sbjct: 263 LIPGLNLSALGIFSTGLSMLPSAAGPRGAAAASYNPFASHSAYLSGLYGAPQIGVFPHQH 322
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---I 308
++ + L P +G +IGK G IKQ+ + + ASIK+ + AEG D +
Sbjct: 323 PVPEQE-----VVYLFIPTQAVGAIIGKKGHHIKQLARFARASIKI--APAEGPDVGERM 375
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGA 367
+ I+ P A R+ + E+ + V + I VPS+ G +IG+GG
Sbjct: 376 VIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLKAHIRVPSSAAGRVIGKGGK 430
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
++E+++ T A + I+ + P E+EE +V+I G + +A ++
Sbjct: 431 TVNELQNLTSAEV-IVPRDQTPD---ENEEVIVKIIGHFFASQTAQRKI 475
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK + +++ + + + +++GA I S
Sbjct: 89 QAKPPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHAS 148
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P + A R+ ++ + + +IL ++ +G LIG+ G + ++
Sbjct: 149 -------PEGSSEACRRILEIMQKEADETKAVEEVPLKILAHNSLVGRLIGKEGRNLKKI 201
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T I I +++ Y E + + G+++ SSA ++ +LR
Sbjct: 202 EQDTGTKITISPLQDL--TIYNPERTITVKGTIEACSSAEVEIMRKLR 247
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 116 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 164
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 165 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 214
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 215 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 270
Query: 219 RS 220
+S
Sbjct: 271 QS 272
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 171
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 172 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 231
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 232 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 283
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 284 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 325
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
DE EL + +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P +
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ER 156
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
++ + G + KA I +L E+ + S N +
Sbjct: 157 IITLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNST 190
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
A AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 191 A----ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 232
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 25/261 (9%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ I +
Sbjct: 36 TYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIILI------S 89
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ +D + + L ++ + ED D+ T VR++VP G +IGKGG
Sbjct: 90 GILDD---VLKGVELVLAKLLSELHTEDG---DDVDPRT--KVRLVVPNSSCGSIIGKGG 141
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+I++ E++A I+I ++ L+ D L+ V G +A+ I S+L+++P
Sbjct: 142 SIIKSFIEESQAGIKISPQDN-NFYGLN-DRLVTVTGTLEEQMRAIDLILSKLYDDPHYV 199
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
Q + S + +S Y G+ G ++ R S+ + +IG V+G+G
Sbjct: 200 QTMHAPFSYAVAYNSMNY------GANGAGGKFQNNKEDRTNSVTIGVADAHIGLVVGRG 253
Query: 281 GGIIKQIRQESGASIKVDSSG 301
G I +I Q SGA IK+ G
Sbjct: 254 GRNIMEISQVSGARIKISDRG 274
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 9/160 (5%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFISTKEFFED 319
+R + G VIGKGG I + +SGA I++ S E D II IS +D
Sbjct: 38 VRFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIILISG--ILDD 94
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+ L + + DP R++VP++ G +IG+GG+II ++A
Sbjct: 95 VLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAG 154
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
I+I +N ++ +V +TG+L+ A+ + +L
Sbjct: 155 IKISPQDN--NFYGLNDRLVTVTGTLEEQMRAIDLILSKL 192
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 32/167 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCD 87
GD+ + R T R + P GSIIGKGG I+K E+++ I+IS G +
Sbjct: 115 GDDVDPR------TKVRLVVPNSSCGSIIGKGGSIIKSFIEESQAGIKISPQDNNFYGLN 168
Query: 88 ERIVTIYSSSEG---------TNLFEDSGEFVSPAQDALFRVHDRIVAEDSL------AD 132
+R+VT+ + E + L++D +V A F VA +S+ A
Sbjct: 169 DRLVTVTGTLEEQMRAIDLILSKLYDDP-HYVQTMH-APFSYA---VAYNSMNYGANGAG 223
Query: 133 DEF---GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
+F E +V + V IG V+G+GG+ I I + A+I+I
Sbjct: 224 GKFQNNKEDRTNSVTIGVADAHIGLVVGRGGRNIMEISQVSGARIKI 270
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 177/395 (44%), Gaps = 57/395 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K L +T+S + I + G E+ +TI+++ EG +
Sbjct: 180 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 239
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + D + E DE I +++L +G +IGK G+
Sbjct: 240 -------------EACRMILDIMQKEA----DETKSAEEIPLKILAHNSLVGRLIGKEGR 282
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G A V+I +L E
Sbjct: 283 NLKKIEQDTGTKITISPLQD----LTIYNPERTITVKGSTEACSNAEVEIMKKLREA-YE 337
Query: 220 SQHLLLSSSSNIYQSSGVYLSA--------PLVGSYGNYSARRDEASAREFSL------R 265
+ + ++ +N+ G+ LSA ++ S A F+L
Sbjct: 338 NDIVAVNQQANLI--PGLNLSALGIFSTGLSMLPSSAGARGAAAAAPYHPFALPEQEVVN 395
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSP 322
L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 396 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMVIITG-----PPEA 448
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A +
Sbjct: 449 QFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV- 507
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
I+ + P E+EE +V+I G + +A ++
Sbjct: 508 IVPRDQTPD---ENEEVIVKIIGHFFASQTAQRKI 539
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 113/257 (43%), Gaps = 72/257 (28%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L ++IGSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEG--SCPERITTITGST-------- 74
Query: 106 SGEFVSPAQDALFRVHDRIV--AEDSLA---DDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+FR I E+ L D +T+R+++PA Q G +IGK G
Sbjct: 75 ---------DAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAG 125
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D L S + + V+G P ++Q ++ +PS
Sbjct: 126 AKIREIRESTGAQVQVAGD----LLPNSTERAVTVSGVP----DTIIQCVRQICLDPS-- 175
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++S++EF + P IG +IG+
Sbjct: 176 ----------------------------------SQSSSQEF----LVPNDLIGCIIGRH 197
Query: 281 GGIIKQIRQESGASIKV 297
G I +IRQ SGA IK+
Sbjct: 198 GSKISEIRQMSGAHIKI 214
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 53/251 (21%)
Query: 134 EFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
E EL++ +T+RML+ +IG +IGK G+ ++ IR ++ A+I I + P + +
Sbjct: 15 EETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITI-SEGSCP------ERI 67
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGN-YS 251
+ G V +A+ IA +L E+ +G+ G+ S
Sbjct: 68 TTITGSTDAVFRAVSMIAFKLEED---------------------------LGAGGDGVS 100
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
A R +LRLV PA G +IGK G I++IR+ +GA ++V GD ++
Sbjct: 101 AGRAP-----VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV-----AGD--LLPN 148
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISE 371
ST+ T ++ C + + + S + LVP+ IGC+IGR G+ ISE
Sbjct: 149 STERAVTVSGVPDTIIQCVRQICLDPSSQSS-----SQEFLVPNDLIGCIIGRHGSKISE 203
Query: 372 MRSATRASIRI 382
+R + A I+I
Sbjct: 204 IRQMSGAHIKI 214
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ IG +IGK G +K+IR++S A I + I ST F S
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDAVFRAVS 82
Query: 322 PTITAALRLQPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A +L+ + S G +T R+++P++Q G LIG+ GA I E+R +T A +
Sbjct: 83 ---MIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQV 139
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
++ + +P E V ++G D + Q+ L
Sbjct: 140 QV-AGDLLPN---STERAVTVSGVPDTIIQCVRQICL 172
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 30/140 (21%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE 98
G R + P + GS+IGK G ++++R T + ++++ + +P ER VT
Sbjct: 102 GRAPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVT------ 155
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSL--ADDEFGELTLITVRMLVPADQIGCVI 156
VS D + + +I + S + EF LVP D IGC+I
Sbjct: 156 -----------VSGVPDTIIQCVRQICLDPSSQSSSQEF----------LVPNDLIGCII 194
Query: 157 GKGGQVIQNIRTETRAQIRI 176
G+ G I IR + A I+I
Sbjct: 195 GRHGSKISEIRQMSGAHIKI 214
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 141/319 (44%), Gaps = 82/319 (25%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G+G T+ R L +++GSIIGK GE VK++R E+ + + ISE C ERI+TI S+
Sbjct: 11 GLGVTLTL-RLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST 67
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRI---VAEDSLADDEFGELTL---ITVRMLVPADQ 151
D +FR I + ED A G ++ +T+R+++PA Q
Sbjct: 68 -----------------DCVFRAFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQ 110
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
G +IGKGG I+ IR T AQI++ D L S + + ++G V + + I +
Sbjct: 111 CGSLIGKGGAKIKEIRESTGAQIQVAGD----LLPNSTERGVTISGNQDSVIQCVKLICT 166
Query: 212 RLHEN----------PSRSQHLLLSSSSNIYQSSGVYLSAPLVG----------SY---G 248
+ E+ PS S +L + + ++ +S + + P+ +Y
Sbjct: 167 VILESPPKGATIPYRPSPSPAAVLIAGNQLFDASE-FATHPMYSVAQGGLDLQQAYTLQN 225
Query: 249 NYSARRDE-ASAREFSLR-----------LVCPAGN----------------IGGVIGKG 280
Y E A + S++ V PAG IG +IG+
Sbjct: 226 QYGIPHSELAKLHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIGSIIGRQ 285
Query: 281 GGIIKQIRQESGASIKVDS 299
G I +IRQ SGA IK+ S
Sbjct: 286 GTKINEIRQVSGAQIKIGS 304
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--------GDDCII---F 310
+LRL+ +G +IGK G +K+IR+ES A + + DC+
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDCVFRAFT 75
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIIS 370
+ T + ED AAL S K P +T R+++P++Q G LIG+GGA I
Sbjct: 76 MITHKLEED-----LAALVANGTISTK-------PPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 371 EMRSATRASIRI 382
E+R +T A I++
Sbjct: 124 EIRESTGAQIQV 135
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 96/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGR--DSYGSYG 481
PM + G +D S G +AT +L G D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFE 104
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI + ++ E
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQ--SIIE 157
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
+ +V ++L+ +T I R P VI GGQ
Sbjct: 158 CVKQIC-------------VVMLETLSQSPPKGVT-IPYR---PKPSSSPVIFAGGQD-- 198
Query: 165 NIRTETRAQIRILKDEHLPLCALSFD------ELLQVAGEPAVVRKALVQIASRLHENPS 218
R T + +C L+ D E + G+ A+ + L ++LH+
Sbjct: 199 --RYSTGSDSASFPHTTPSMC-LNPDLEGPPLEAYTIQGQYAIPQPDL----TKLHQLAM 251
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ H ++ + + SG+ S+P V Y +ASA+ S L P IG +IG
Sbjct: 252 QQSHFPMTHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHELTIPNDLIGCIIG 304
Query: 279 KGGGIIKQIRQESGASIKV 297
+ G I +IRQ SGA IK+
Sbjct: 305 RQGAKINEIRQMSGAQIKI 323
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 64
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 65 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 114
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 115 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 170
Query: 219 RS 220
+S
Sbjct: 171 QS 172
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 71
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 72 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 131
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 132 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 183
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 184 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++ + G
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 65
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 66 AIFKAFAMIIDKLEED--------------------------INSSMTNSTA----ASRP 95
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 96 PVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFE 104
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI + ++ E
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQ--SIIE 157
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
+ +V ++L+ +T I R P VI GGQ
Sbjct: 158 CVKQIC-------------VVMLETLSQSPPKGVT-IPYR---PKPSSSPVIFAGGQD-- 198
Query: 165 NIRTETRAQIRILKDEHLPLCALSFD------ELLQVAGEPAVVRKALVQIASRLHENPS 218
R T + +C L+ D E + G+ A+ + L ++LH+
Sbjct: 199 --RYSTGSDSASFPHTTPSMC-LNPDLEGPPLEAYTIQGQYAIPQPDL----TKLHQLAM 251
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ H ++ + + SG+ S+P V Y A D ASA+ S L P IG +IG
Sbjct: 252 QQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPNDLIGCIIG 305
Query: 279 KGGGIIKQIRQESGASIKV 297
+ G I +IRQ SGA IK+
Sbjct: 306 RQGAKINEIRQMSGAQIKI 324
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 29/265 (10%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSE 98
+ T R+L GS+IGKGG + +S++ + I++S E PG +RI+ I S
Sbjct: 80 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMI---SG 136
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
TN E + + L ++ + ED D + VR++VP G +IGK
Sbjct: 137 ATN------EIIKAMELILAKLLSEMHTEDGDEADPRSK-----VRLIVPNSSCGGIIGK 185
Query: 159 GGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GG I++ +++A I+I + +L L D L+ + G +A+ I S+L E+
Sbjct: 186 GGSTIKSFIEDSQASIKISPQDNNYLGLT----DRLVTLMGSLEEQMRAIDLILSKLTED 241
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
P +Q + S Y ++ ++ G+ G + +++ R S+ + +IG V
Sbjct: 242 PHYTQFMNAPFS---YAAAYNSMNYGPNGAGGKFQNNKED---RSNSVTIGVADEHIGLV 295
Query: 277 IGKGGGIIKQIRQESGASIKVDSSG 301
+G+GG I I Q SGA IK+ G
Sbjct: 296 VGRGGRNIMDISQASGARIKISDRG 320
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 15/225 (6%)
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
V A +++ + + R++HL S + Y+S+P V + R + E
Sbjct: 22 VFTAKLRLRKHIAIDKKRARHL--HQISFMESPESAYVSSPEVPPKRSSPPRSPTSDFME 79
Query: 262 FS--LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFIS--TK 314
S +R + G VIGKGG I + +SGA I++ + D II IS T
Sbjct: 80 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATN 139
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
E + I A L + + E DP R++VP++ G +IG+GG+ I
Sbjct: 140 EIIK-AMELILAKLLSEMHTEDGDE---ADPRSKVRLIVPNSSCGGIIGKGGSTIKSFIE 195
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ASI+I +N + +V + GSL+ A+ + +L
Sbjct: 196 DSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKL 238
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 75 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 124
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 125 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 180
Query: 219 RS 220
+S
Sbjct: 181 QS 182
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 81
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 82 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 141
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 142 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 193
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 194 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 235
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 16 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 68
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 69 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 101
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 64
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 65 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 114
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 115 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 170
Query: 219 RS 220
+S
Sbjct: 171 QS 172
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 71
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 72 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 131
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 132 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 183
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 184 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++ + G
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 65
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 66 AIFKAFAMIIDKLEED--------------------------INSSMTNSTA----ASRP 95
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 96 PVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 177/426 (41%), Gaps = 65/426 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G+ ++ L +T S I I + G E+ +TI+S+ EG++
Sbjct: 166 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 225
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + D + + D +F E I +++LV + +G +IGK G+
Sbjct: 226 -------------NACRTIMD--IMQKEAIDTKFTEE--IPLKILVHNNFVGRLIGKEGR 268
Query: 162 VIQNIRTETRAQIRILKDEHLPL---------------CALSFDELLQVAGEPAVVRKAL 206
++ I +T +I I + L L C + +E+++ E A
Sbjct: 269 NLKKIEQDTGTKITISSLQDLTLYNPERTITVKGSIEACGRAEEEVMKKIREAYESDVAA 328
Query: 207 VQIASRLHEN---------PSRSQHLLLSSSS---------NIYQSSGVYLSAPLVGSYG 248
+ + S L PS S + S SS + S + PL S
Sbjct: 329 MNLQSNLIPGLNLNALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLWASMM 388
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+ S + S ++ L P +G +IGK G IKQ+ +GASIK G + +
Sbjct: 389 SASGQTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRM 448
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGA 367
+ I P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 449 VII-----VGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGK 503
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
++E+++ T A + ++ + P +D+ +V+I G QV+ R F
Sbjct: 504 TVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFAC-----QVSFYRRGAVFCFI 555
Query: 428 GALAAH 433
AH
Sbjct: 556 CIFTAH 561
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 19/248 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+ LR++ P +G +IGK G I+ + +++ + I + +++GA + I ST E
Sbjct: 166 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGA-AEKPITIHSTPEGS 224
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ TI ++ + ++ TE I +ILV + +G LIG+ G + ++ T
Sbjct: 225 SNACRTIMDIMQKEAIDTKFTEE------IPLKILVHNNFVGRLIGKEGRNLKKIEQDTG 278
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVL 437
I I + +++ Y E + + GS++ A +V ++R A+ ++
Sbjct: 279 TKITISSLQDL--TLYNPERTITVKGSIEACGRAEEEVMKKIREAYESDVAAMNLQSNLI 336
Query: 438 PYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGGSLSGGGNAYGAYGDH 497
P + + + G + S G G S ++ PG S+G S G A
Sbjct: 337 PGLNL-------NALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLWASMMS 389
Query: 498 SSGRGLSG 505
+SG+ L+G
Sbjct: 390 ASGQTLAG 397
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 195/435 (44%), Gaps = 60/435 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 G--AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR---LR 420
G A ++E+++ + A + ++ + P D+ +V+ITG + ++Q ++ +
Sbjct: 507 GKTAKVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQAKVAQRKIQEILTQ 563
Query: 421 ANTFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 VKQHQQQKALQSGPP 578
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 126/284 (44%), Gaps = 69/284 (24%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 94 VGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 151
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
++ E +G+ +P A + G +T T+ M+VP
Sbjct: 152 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 194
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 195 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNP---TPEDKPLRISGEPARVEKARQAVL 251
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG D ++++
Sbjct: 252 VLINSR--DRPGGSMH------------------------YG-----YDGQETSQYAV-- 278
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 279 --PAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 320
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 181/419 (43%), Gaps = 77/419 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 255
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E +D I +++L +G +IGK G+
Sbjct: 256 --------CSAACRMILDIMQKEANETKTTED-------IPLKILAHNSLVGRLIGKEGR 300
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ I +T +I I L+D L + + + V G KA V+I +L +EN
Sbjct: 301 NLKKIEEDTGTKITISSLQD----LTIYNPERTITVKGSIDACCKAEVEITKKLREAYEN 356
Query: 217 P----SRSQHLLLSSSSN---IYQS------------SGVYLSAP------------LVG 245
++ +L+ + N I+ S S V AP L G
Sbjct: 357 DIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAVPAVAPAGYNPFLSHSSHLSG 416
Query: 246 SYGNYSA-----RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
YG A + + + + + L P +G +IGK G IKQ+ +GASIK+ +
Sbjct: 417 LYGVPPASAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--A 474
Query: 301 GAEGDDC----IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
AE D +I T E I L+ + S K E + + T I VPS+
Sbjct: 475 PAESPDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSAKEEVK-----LETHIKVPSS 529
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E+++ T A + I+ + P DE V+I+G + +A ++
Sbjct: 530 AAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDEVFVKISGHFFASQTAQRKI 585
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
G YG+ R+ +F LR++ P +G +IGK G IK + +++ + + + +++G
Sbjct: 187 GGYGSPRPRQ-----HDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAG 241
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGC 360
A + I ST E +AA R+ +K E+ I +IL ++ +G
Sbjct: 242 A-AEKPITIHSTPE-------GCSAACRMILDIMQKEANETKTTEDIPLKILAHNSLVGR 293
Query: 361 LIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
LIG+ G + ++ T I I + +++ Y E + + GS+D A ++T +LR
Sbjct: 294 LIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLR 351
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++ VY ++ P + +G++IGK G+ +KQL ++I+I+ P ER+V I + E
Sbjct: 437 QEVVYLFI-PTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQ 495
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R+ ++ E+ + E E+ L T + VP+ G VIGKGG
Sbjct: 496 --FKAQG-----------RIFGKLKEENFFSAKE--EVKLET-HIKVPSSAAGRVIGKGG 539
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 540 KTVNELQNLTSAEVIVPRDQ 559
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 163/386 (42%), Gaps = 57/386 (14%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P + +G IIG+GGE + +L+SET I+++ G ER T+ S
Sbjct: 92 GICNEDI----RVPDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSR 147
Query: 98 EGTNLFED-----SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI----TVRMLVP 148
+ N ++ + V P +D + + S A L V +++P
Sbjct: 148 DAVNRAKELVQSIVNQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIP 207
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA--- 205
++G +IGKGG+ I+ ++ ++ A++ +++D ++ L++ G+P V A
Sbjct: 208 GPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGP----GQEQEKPLRITGDPQKVEHAKQL 263
Query: 206 ----LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP------LVG---SYGNYSA 252
+ + +L+ +R+ SS+N + G S + G YG++
Sbjct: 264 VYELIAEKEMQLYNRGTRN-----FSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEG 318
Query: 253 RRDEASAR-EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD--SSGAEGDDCII 309
R + EFS + P+ G +IGKGG IK+I Q++GA ++D + G + D
Sbjct: 319 NRPAGEGKVEFSYPV--PSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFT 376
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP-------------VITTRILVPSA 356
T E E L S +G P + VP+
Sbjct: 377 IRGTPEQVEHAKRVFAEKLGGG-MGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTN 435
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
+ G +IG+GG I ++ T A +
Sbjct: 436 KCGIIIGKGGETIKQINQQTGAHCEL 461
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 54/302 (17%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + PG + E+ + I + +
Sbjct: 205 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEHAKQLV 264
Query: 107 GEFVSPAQDALFRVHDR-IVAEDSLADD-------------------EFGELT------- 139
E ++ + L+ R + +S + D E+G
Sbjct: 265 YELIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGNRPAGE 324
Query: 140 -LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+ VP+++ G +IGKGG I+ I +T A + D P D+ + G
Sbjct: 325 GKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCEL--DRRNP--GTDTDKFFTIRGT 380
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
P V A A +L S + + N YG + R
Sbjct: 381 PEQVEHAKRVFAEKLGGGMGSSSNGYPTGRPN---------------EYGGWDVNRQ--- 422
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD--SSGAEGDDCIIFISTKEF 316
+ + P G +IGKGG IKQI Q++GA ++D + G E + T E
Sbjct: 423 GNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTIKGTPEQ 482
Query: 317 FE 318
E
Sbjct: 483 VE 484
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 25/225 (11%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPG---------DETEQRGIGSEDTVYRYLCPLRKIGSI 58
N+ F D + G RR G R G + Y P K G I
Sbjct: 282 NFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGNRPAGEGKVEFSYPVPSNKCGII 341
Query: 59 IGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IGKGG +K++ +T ++ + PG D ++ TI + E E + A+
Sbjct: 342 IGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPE---QVEHAKRVF--AEKLG 396
Query: 118 FRVHDRIVAEDSLADDEFGELTL------ITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+ + +E+G + + V VP ++ G +IGKGG+ I+ I +T
Sbjct: 397 GGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTG 456
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
A + D P ++ + G P V A + +L N
Sbjct: 457 AHCEL--DRRNP--GTETEKFFTIKGTPEQVEHAQRIFSEKLGNN 497
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIG 157
+A+F+ I+ D L +D +T +T+R++VPA Q G +IG
Sbjct: 66 ---------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIG 114
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
KGG I+ IR T AQ+++ D LP S + + +AG P + + + QI + E+P
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKQICVVMLESP 170
Query: 218 SR 219
+
Sbjct: 171 PK 172
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 74
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 75 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 124
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 125 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 180
Query: 219 RS 220
+S
Sbjct: 181 QS 182
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 81
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 82 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 141
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 142 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 193
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 194 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 235
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 16 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 68
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 69 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 101
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 191/435 (43%), Gaps = 64/435 (14%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 332 SRQASPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 388
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EG S A ++ + + + L ++ + +
Sbjct: 389 TGAAEKPITILSTPEG----------ASAACKSILEIMHKEAQDTKLTEE-------VPL 431
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 432 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 489
Query: 204 KALVQIASRLHEN-------PSRSQHLL---------LSSSSNIYQSSGVYLSAPLVGSY 247
+A +I ++ E+ + HL+ L ++ + + Y
Sbjct: 490 RAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTMTPPY 549
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 550 PQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 603
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 604 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 659
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEE---MVQITGSL---DVASSALSQVTLRLR 420
++E+++ + A + VP+ DE +V+ITG VA + ++ +++
Sbjct: 660 KTVNELQNLSSAEVV------VPRDQTPDENNQVVVKITGHFYACQVAQRKIQEILSQVK 713
Query: 421 ANTFEREGALAAHPP 435
+ +++ AL + PP
Sbjct: 714 QH--QQQKALQSGPP 726
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 61/290 (21%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ + +
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGA---- 91
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
++ Q A+ + ++++E DD E VR++VP G +IGKGG
Sbjct: 92 ---------INEIQRAVELILSKLLSELHSEDDNDAE-PKTKVRLVVPNGSCGGIIGKGG 141
Query: 161 QVIQNIRTETRAQIRIL--------KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
I++ +++A I+I +++ L SFDE + +A+ I S+
Sbjct: 142 ATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQM----------RAIELIVSK 191
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLS--------------APLVGSYGNYSAR----- 253
L E+P +Q + ++ + GVY S AP + NY
Sbjct: 192 LSEDPHYAQSM-----NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGAAGG 246
Query: 254 --RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ R SL + +IG V+G+GG I +I Q SGA IK+ G
Sbjct: 247 KLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISDRG 296
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
+R + G VIGKGG I + +SGA I++ + EFF +
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN-------------HEFFPGTTDR 84
Query: 324 I------------TAALRLQPRCSEKTERESGD--PVITTRILVPSAQIGCLIGRGGAII 369
I L L SE + D P R++VP+ G +IG+GGA I
Sbjct: 85 IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++A I+I +N +++ +V +TGS D A+ + +L
Sbjct: 145 RSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVSKL 192
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30 [Arabidopsis thaliana]
gi|7406447|emb|CAB85549.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 313
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 29/263 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + + ++++ + I++S E PG +RI+ I S +
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIK-- 92
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V+ + L ++H + AED +E I R++VP G +IGKGG
Sbjct: 93 -------EVVNGLELILDKLHSELHAEDG---NEVEPRRRI--RLVVPNSSCGGIIGKGG 140
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++ E++A I+I ++ LS D L+ ++G +A+ I ++L E+ S
Sbjct: 141 ATIKSFIEESKAGIKISPLDNT-FYGLS-DRLVTLSGTFEEQMRAIDLILAKLTEDDHYS 198
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLV--GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
Q++ + Y + Y S GS G Y ++EAS ++ + +IG V+G
Sbjct: 199 QNV-----HSPYSYAAGYNSVNYAPNGSGGKYQNHKEEAST---TVTIGVADEHIGLVLG 250
Query: 279 KGGGIIKQIRQESGASIKVDSSG 301
+GG I +I Q +GA IK+ G
Sbjct: 251 RGGRNIMEITQMTGARIKISDRG 273
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFIS--TKEFF 317
+R + G VIGKGG I + + +SGA I++ S E D II IS KE
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQL-SRNQEFFPGTTDRIIMISGSIKEVV 95
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I L + + E E P R++VP++ G +IG+GGA I ++
Sbjct: 96 -NGLELILDKLHSELHAEDGNEVE---PRRRIRLVVPNSSCGGIIGKGGATIKSFIEESK 151
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
A I+I +N + +V ++G+ + A+ + +L
Sbjct: 152 AGIKISPLDNT--FYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 33/176 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------------- 46
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGKGGQVIQ 164
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGKGG I+
Sbjct: 47 --NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 102
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
IR T AQ+++ D + S + + +AG P V + + QI + E S+S
Sbjct: 103 EIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQS 154
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G +K+IR+ESGA I + S G + I I L
Sbjct: 6 VGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAFAMIIDKLEEDI 64
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
S + P +T R++VP+ Q G LIG+GG I E+R +T A +++ + +P
Sbjct: 65 NSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN-- 121
Query: 393 YEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYVPMSLDITDGSK 451
E + I G + + Q+ L L + +G + +PY PM +
Sbjct: 122 -STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQPMPAS-SPVIC 175
Query: 452 YGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
G +D S G +AT +L P D+Y G
Sbjct: 176 AGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 37/147 (25%)
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +IGK G+ ++ IR E+ A+I I + + P + ++ + G + KA I
Sbjct: 5 EVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTNAIFKAFAMII 57
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+L E+ + S N +A AS +LRLV PA
Sbjct: 58 DKLEED--------------------------INSSMTNSTA----ASRPPVTLRLVVPA 87
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 88 TQCGSLIGKGGCKIKEIRESTGAQVQV 114
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 47/271 (17%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGTNL 102
++L GS+IGKGG + + ++ T + I++S E PG ++R+V +
Sbjct: 47 LKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIV--------- 97
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
SG+ + Q L + ++VA D D G+ V ++VP GC+IGKGG
Sbjct: 98 ---SGDLSAILQ-VLHLIITKLVA-DGEGIDRMGQPQ---VALVVPNSSCGCIIGKGGSK 149
Query: 163 IQNIRTETRAQIRIL-KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
I++ +++A I++ +D LP C D L + G V +A+ +A+ L E+P+
Sbjct: 150 IRSFVEDSQADIKLSNQDRMLPGCN---DRTLTITGTIDCVLRAVALVATTLCEDPAY-- 204
Query: 222 HLLLSSSSNIYQSSGVYLSAPL----------VGSYGNYSARRDEASA-----REFSLRL 266
++ +++ S + +PL G + + RR A E S+ +
Sbjct: 205 ------ATLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATPRRYGAGQGGGRDDETSILV 258
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P IG V+G+GG I +++ SG IKV
Sbjct: 259 TIPDSLIGAVLGRGGRTIAEVQVASGCRIKV 289
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
F+L+ + G VIGKGG I + + +GA I++ S E +F T + S
Sbjct: 45 FTLKFLISPSAAGSVIGKGGATINEFQALTGARIQL-SRNRE-----VFPGTNDRVVIVS 98
Query: 322 PTITAALRLQPRCSEKTERES------GDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
++A L++ K + G P + ++VP++ GC+IG+GG+ I
Sbjct: 99 GDLSAILQVLHLIITKLVADGEGIDRMGQPQVA--LVVPNSSCGCIIGKGGSKIRSFVED 156
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++A I+ L+N++ D + ITG++D A++ V L
Sbjct: 157 SQADIK-LSNQDRMLPGCNDRTLT-ITGTIDCVLRAVALVATTL 198
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 77
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 78 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 127
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 128 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 183
Query: 219 RS 220
+S
Sbjct: 184 QS 185
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 78
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 79 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 108
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 109 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 145
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 85
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 86 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 144
Query: 382 I 382
+
Sbjct: 145 V 145
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 41/259 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFE 104
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI + ++ E
Sbjct: 112 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQ--SIIE 169
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
+ +V ++L+ +T I R P VI GGQ
Sbjct: 170 CVKQIC-------------VVMLETLSQSPPKGVT-IPYR---PKPSSSPVIFAGGQD-- 210
Query: 165 NIRTETRAQIRILKDEHLPLCALSFD------ELLQVAGEPAVVRKALVQIASRLHENPS 218
R T + +C L+ D E + G+ A+ + L ++LH+
Sbjct: 211 --RYSTGSDSASFPHTTPSMC-LNPDLEGPPLEAYTIQGQYAIPQPDL----TKLHQLAM 263
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ H ++ + + SG+ S+P V Y A D ASA+ S L P IG +IG
Sbjct: 264 QQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPNDLIGCIIG 317
Query: 279 KGGGIIKQIRQESGASIKV 297
+ G I +IRQ SGA IK+
Sbjct: 318 RQGAKINEIRQMSGAQIKI 336
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 77
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 78 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 127
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 128 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 183
Query: 219 RS 220
+S
Sbjct: 184 QS 185
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 78
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 79 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 108
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 109 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 145
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 85
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 86 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 144
Query: 382 I 382
+
Sbjct: 145 V 145
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 156/387 (40%), Gaps = 85/387 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR +T +S+ VPG +R++T+ + G
Sbjct: 45 RAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGALTGI------ 98
Query: 107 GEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
DA V D +V A G +R+L+ +Q+G +IG+ G I+
Sbjct: 99 -------ADAYGLVADSLVKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIK 151
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
I+ + ++ + + E LP S + +++V G P ++KA+ +I L ++ R +
Sbjct: 152 QIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTV 207
Query: 225 LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
L S + Q G PL G+ G +G G G
Sbjct: 208 LYSPAVRVQGGG----PPLNGT---------------------------GAPVGPGAGY- 235
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSE---KTERE 341
GA + +G D F P+P PR E T E
Sbjct: 236 -------GAPRSYNRTGNGAD----FTGAA-----PAP-------YSPRRQEGPLPTTNE 272
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMV 399
G+ + T I +P+ +GC+IGRGG+ ISE+R ++ A I I K +++ E M
Sbjct: 273 DGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIA------KAPHDETGERMF 326
Query: 400 QITGSLDVASSALSQVTLRLRANTFER 426
ITG AL + L A R
Sbjct: 327 TITGGSAANEKALYLLYENLEAEKMRR 353
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G A
Sbjct: 279 TQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPH----DETGERMFTITGGSAA 334
Query: 202 VRKALVQIASRLH-ENPSRSQ 221
KAL + L E RSQ
Sbjct: 335 NEKALYLLYENLEAEKMRRSQ 355
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 70/420 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N + E L + GE++L R+L + IG +IGKGG
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------------GEISL---RILAHNNLIGRIIGKGG 286
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + ++ V G + KA I+S+L +E
Sbjct: 287 TTIKKIMQDTDTKITVSSIND----INNFNLERIITVKGSIDNMSKAESMISSKLRQSYE 342
Query: 216 N------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRDE---AS 258
N P ++S++ Y S G+Y S P Y +
Sbjct: 343 NDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIGD 402
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+E + L P ++G +IG G I+ I + SGAS+K+ + E D + E
Sbjct: 403 TQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPV------EQQN 453
Query: 319 DPSPTITAALRLQPRCS----EKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAII 369
D TI + Q + EK E + D +T ILVPS Q+G +IG+GG +
Sbjct: 454 DRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNV 513
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
E++ T + I+ L+ + + ++E VQI G SA R+RA + GA
Sbjct: 514 RELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA----QRRIRAMVLQSSGA 568
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ + +G +IG+ G I+QI Q + A + V DS GA I +
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITI-------Y 238
Query: 318 EDPSPTITAALRLQPRCSEKTERES---GDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+P A ++ E T++E+ I+ RIL + IG +IG+GG I ++
Sbjct: 239 GNPENCTNACKKIM----EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
T I + + ++ + E ++ + GS+D S A S ++ +LR + A+A
Sbjct: 295 DTDTKITVSSINDINN--FNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQS 352
Query: 435 PVLPYV-PMSLDITDGSKYGNR 455
+ P + PM++ T G Y +R
Sbjct: 353 LMFPGLHPMAMMSTAGMGYSSR 374
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 167/391 (42%), Gaps = 74/391 (18%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P + +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 104 GICNEDI----RVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPES-GLPERVCTLTGSR 158
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT------VRMLVPADQ 151
E N A++ + + ++ + + D + V +++P +
Sbjct: 159 EAVNR----------AKELVLSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFVEIMIPGPK 208
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
+G +IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A +
Sbjct: 209 VGLIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYE 264
Query: 212 RLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAG 271
+ E + H + GSY N S+ + S + ++ P
Sbjct: 265 LIAEKEMQMFHRGARGNDR-------------SGSYSNDSSF-NHGSGTTDGVEVLVPRA 310
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTIT 325
+G VIGKGG +IK+I+ E+GA ++ +G CI+ + ++ + I
Sbjct: 311 AVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCILSGKHQAVEQVRQRIQELID 370
Query: 326 AALR----------------------LQPRCSEKTERESGDPV---ITTRILVPSAQIGC 360
+ +R P +R G P+ I T VPS++ G
Sbjct: 371 SVMRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETTFTVPSSKCGI 430
Query: 361 LIGRGGAIISEMRSATRASI----RILTNEN 387
+IG+GG I ++ T A R +NEN
Sbjct: 431 IIGKGGETIKQINQQTGAHCELDRRNQSNEN 461
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 125/284 (44%), Gaps = 41/284 (14%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I + +
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 107 GEFVSPAQDALF----RVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E ++ + +F R +DR + + + G T V +LVP +G VIGKGG +
Sbjct: 263 YELIAEKEMQMFHRGARGNDRSGSYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 322
Query: 163 IQNIRTETRAQIRILKD-EHLP---LCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
I+ I+ ET A+++ + E P C LS +A+ Q+ R+ E
Sbjct: 323 IKKIQAETGARVQFQQGREDGPGDRKCILSGK------------HQAVEQVRQRIQE--- 367
Query: 219 RSQHLLLSS-------SSNIYQSSGV----YLSAPLVGSYGNYSARRDEASAREFSLRLV 267
L+ S S + SG + + YG + R+ +
Sbjct: 368 -----LIDSVMRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETTFT 422
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
P+ G +IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 423 VPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFI 466
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 179/420 (42%), Gaps = 70/420 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E T
Sbjct: 136 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 195
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N + E L + GE++L R+L + IG +IGKGG
Sbjct: 196 NACKKIMEVTQQEAYGLSK----------------GEISL---RILAHNNLIGRIIGKGG 236
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + ++ V G + KA I+S+L +E
Sbjct: 237 TTIKKIMQDTDTKITVSSIND----INNFNLERIITVKGSIDNMSKAESMISSKLRQSYE 292
Query: 216 N------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRDE---AS 258
N P ++S++ Y S G+Y S P Y +
Sbjct: 293 NDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQGIPIGD 352
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+E + L P ++G +IG G I+ I + SGAS+K+ + E D + E
Sbjct: 353 TQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPV------EQQN 403
Query: 319 DPSPTITAALRLQPRCS----EKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAII 369
D TI + Q + EK E + D +T ILVPS Q+G +IG+GG +
Sbjct: 404 DRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNV 463
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
E++ T + I+ L+ + + ++E VQI G SA R+RA + GA
Sbjct: 464 RELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA----QRRIRAMVLQSSGA 518
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ + +G +IG+ G I+QI Q + A + V DS GA I +
Sbjct: 136 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITI-------Y 188
Query: 318 EDPSPTITAALRLQPRCSEKTERES---GDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+P A ++ E T++E+ I+ RIL + IG +IG+GG I ++
Sbjct: 189 GNPENCTNACKKIM----EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 244
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
T I + + ++ + E ++ + GS+D S A S ++ +LR + A+A
Sbjct: 245 DTDTKITVSSINDINN--FNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQS 302
Query: 435 PVLPYV-PMSLDITDGSKYGNR 455
+ P + PM++ T G Y +R
Sbjct: 303 LMFPGLHPMAMMSTAGMGYSSR 324
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SFLERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IG+ G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LFPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG + R
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTQREVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + L +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSFL-------ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IG+ G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQV 137
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSFLERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 37/198 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE--- 215
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLEVSP 171
Query: 216 -NPSRSQHLLLSSSSNIY 232
P + Q + S+IY
Sbjct: 172 QAPPKLQCIPWRLKSSIY 189
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 106/262 (40%), Gaps = 55/262 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG------ 99
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI +
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 160
Query: 100 ---TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLAD-DEFGELTLITVRMLVPADQIGCV 155
+ E S + Q +R+ I +D + + T M + D
Sbjct: 161 QICVVMLEVSPQAPPKLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDL---- 216
Query: 156 IGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
E PL E + G+ A+ + L ++LH+
Sbjct: 217 ------------------------EGPPL------EAYTIQGQYAIPQPDL----TKLHQ 242
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
+ H ++ + + SG+ S+P V Y A D ASA+ S L P IG
Sbjct: 243 LAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPNDLIGC 296
Query: 276 VIGKGGGIIKQIRQESGASIKV 297
+IG+ G I +IRQ SGA IK+
Sbjct: 297 IIGRQGAKINEIRQMSGAQIKI 318
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 177/399 (44%), Gaps = 60/399 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ +T++ + + + G E+ +TIY + E
Sbjct: 129 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 188
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKG 159
+A R+ + + E + + + + I +++L + IG +IGKG
Sbjct: 189 -------------NACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIGKG 235
Query: 160 GQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---H 214
G I+ I ET +I + + D + + + + ++ V G + +A QI+++L +
Sbjct: 236 GNTIKRIMQETDTKITVSSIND----INSFNLERIITVKGAIDNMSRAEAQISAKLRQSY 291
Query: 215 EN------------PSRSQHLLLSSSSNIYQSSGVYL-SAPLVGSYGNYSARRDEASARE 261
EN P +++++ Y S G+Y AP G Y +A+ S
Sbjct: 292 ENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQE- 350
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+ L P +G +IG G I+ I + SGAS+K+ A D+ +E +
Sbjct: 351 -TTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI----APIDET----KPQETQNERR 401
Query: 322 PTIT----AALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
TI A + Q EK E S D +T I+VPS+Q+G +IG+GG + E+
Sbjct: 402 VTIVGSPEAQWKAQYLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVREL 461
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
+ T + I++ P+ EDE V I G SA
Sbjct: 462 QRVTGSVIKLPEQGASPQ---EDETTVHIIGPFFSVQSA 497
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 152/367 (41%), Gaps = 58/367 (15%)
Query: 63 GEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHD 122
GE VK++R E+ + I ISE C ERIVTI + DA+F+
Sbjct: 6 GETVKKMREESGARINISEG--NCPERIVTITGPT-----------------DAIFKAFA 46
Query: 123 RIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
I + +S+++ +T+R++VPA Q G +IGKGG I+ IR T AQ+++
Sbjct: 47 MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 106
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL---SSSSNIYQ 233
D + S + + ++G P + + + QI + E+P + + +S+ +
Sbjct: 107 AGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIF 162
Query: 234 SSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
+ G + PL S N S ++++ G + ++ Q +
Sbjct: 163 AGGQVRADPLAASTANLSLLLQPPPLPAYTIQ---------GQYAIPHPDLTKLHQLAMQ 213
Query: 294 SIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILV 353
G T F + ++ Q + + ++ P T + +
Sbjct: 214 QTPFPPLG----------QTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTI 263
Query: 354 PSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALS 413
P+ IGC+IGR G I+E+R + A I+I A E QIT + A+ +L+
Sbjct: 264 PNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------ATEGSSERQITITGTPANISLA 316
Query: 414 QVTLRLR 420
Q + R
Sbjct: 317 QYLINAR 323
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTI 93
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI
Sbjct: 74 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI 121
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 290 ESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVI 347
++GA +V G ++ +I +S++E +DP SPTI A + L + S E +
Sbjct: 548 QTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----L 603
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
TTR++VPS ++GC++G GG +I+EMR T A IR+ + + PK DEE+VQ
Sbjct: 604 TTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 16/107 (14%)
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
+ER++ + S E + VSP +AL +H + +LA++ +T R++
Sbjct: 564 EERLIVVSSQ-------EIPDDPVSPTIEALILLHSK---ASTLAENH-----QLTTRLV 608
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
VP++++GC++G+GG+VI +R T A+IR+ P LSFDE L
Sbjct: 609 VPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPK-YLSFDEEL 654
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
A + + RLV P+ +G ++G+GG +I ++R+ +GA I+V S
Sbjct: 598 AENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKA 642
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 41 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 96
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E L A+ L ++ DR +D G T+ V L+PA
Sbjct: 97 CVLTGTPESIEL----------AKRLLGQIVDRCRNGPGFHNDVDGSSTVQEV--LIPAS 144
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 145 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRMTGDPFKVQQAREMVL 201
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G+ G+++ R SL + P
Sbjct: 202 EIIREKD----------------------QADFRGARGDFAPRTGGG-----SLEVSVPR 234
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 235 FAVGIVIGRNGEMIKKIQNDAGVRIQ 260
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 52/283 (18%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
TV L P K+G +IGKGGE +KQL+ T + + + P G D+ + +
Sbjct: 135 TVQEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRMTGDPFKVQ 194
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR A A G ++ + VP +G VIG+ G
Sbjct: 195 QAREMVLEIIREKDQADFRG-----ARGDFAPRTGGG----SLEVSVPRFAVGIVIGRNG 245
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + QV G P R
Sbjct: 246 EMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPP------------------DRC 282
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS-ARRDEASAREFSL---------RLVCPA 270
QH ++++ + L+A +G + AR ++SL PA
Sbjct: 283 QH-----AAHVINE--LILTAQERDGFGGLAVARGRGRGRGDWSLGTPGGIQEITYTVPA 335
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 336 DKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFT 378
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 116/299 (38%), Gaps = 56/299 (18%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE----HLPLCALSFDELLQV 195
+IT VP +G +IG+GG+ I I+ E+ +I+I + P E +++
Sbjct: 49 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEL 108
Query: 196 AGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
A ++ L QI R P H + SS + +
Sbjct: 109 A------KRLLGQIVDRCRNGPGF--HNDVDGSSTVQE---------------------- 138
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFIST 313
++ PA +G VIGKGG IKQ+++ +G + + G G D + ++
Sbjct: 139 ----------VLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRMTG 188
Query: 314 KEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAII 369
F + + +R + + + R P + + VP +G +IGR G +I
Sbjct: 189 DPFKVQQAREMVLEIIREKDQADFRGARGDFAPRTGGGSLEVSVPRFAVGIVIGRNGEMI 248
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
++++ I+ ++ + E Q+ G D A + V L ER+G
Sbjct: 249 KKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTAQERDG 301
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 62/298 (20%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGTN 101
+ R L R++G++IGKGGE VK +R ++ + + IS+ + P ERIVTI + TN
Sbjct: 20 NLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTP---ERIVTITGT---TN 73
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ E + + F + D G +T +++VPA Q G +IGKGG
Sbjct: 74 AICKATELIGLKVEEFFERQN---------GDWNGPKAPLTFKLIVPASQCGFIIGKGGC 124
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
I+ IR + A I++ D + S + L+ + G + + + Q+ + L ++P RS
Sbjct: 125 KIKEIRESSGAAIQVASD----MLPNSTERLVSITGTTGTISQCVYQVCNVLLDSPPRSA 180
Query: 222 HLLLS--SSSNIYQSSGV------------------------------YLSAPLVGSY-- 247
+ S ++ + SS V A L GS
Sbjct: 181 TIPYDPRSKTSGFASSAVGNDFGRQRTNPLASLAALGLGTASTGGINPAALAALAGSQLR 240
Query: 248 --------GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
G+ + +++ ++ + P IG VIG+ G I +IRQ SGA + +
Sbjct: 241 TGNRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHI 298
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 30/190 (15%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++R++ +G VIGKGG +K IR +SGA + + S G+ + + T +
Sbjct: 21 LTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLI-SDGSTPERIVTITGTTNAICKAT 79
Query: 322 PTITAALRLQPRCSEKTERESGD-----PVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
I L+++ E ER++GD +T +++VP++Q G +IG+GG I E+R ++
Sbjct: 80 ELI--GLKVE----EFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESS 133
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP- 435
A+I++ ++ + E +V ITG+ S + QV L PP
Sbjct: 134 GAAIQVASD----MLPNSTERLVSITGTTGTISQCVYQVC-----------NVLLDSPPR 178
Query: 436 --VLPYVPMS 443
+PY P S
Sbjct: 179 SATIPYDPRS 188
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
E + S T + VP+ IGC+IGR G+ I+E+R + A + I E + +
Sbjct: 252 EHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENE 311
Query: 396 EEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMS 443
+ + ITG+ D S A + + + EG HP VL V S
Sbjct: 312 DRHITITGNKDSISVAKYLIEMSVELQKANLEG--QTHPLVLTMVAAS 357
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 57/395 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K L +T+S + I + G E+ +TI+++ EG +
Sbjct: 118 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 177
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + D + E DE I +++L +G +IGK G+
Sbjct: 178 -------------EACRMILDIMQKEA----DETKSAEEIPLKILAHNSLVGRLIGKEGR 220
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G A V+I +L E
Sbjct: 221 NLKKIEQDTGTKITISPLQD----LTIYNPERTITVKGSTEACSNAEVEIMKKLREA-YE 275
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYG--------NYSARRDEASAREFSL------R 265
+ + ++ +N+ G+ LSA + S G A F+L
Sbjct: 276 NDIVAVNQQANLI--PGLNLSALGIFSTGLSMLPSSVGARGAAAAAPYHPFALPEQEVVN 333
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSP 322
L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 334 LFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMVIITG-----PPEA 386
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A +
Sbjct: 387 QFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV- 445
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
I+ + P E+EE +V+I G + +A ++
Sbjct: 446 IVPRDQTPD---ENEEVIVKIIGHFFASQTAQRKI 477
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 66/420 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSE----DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
G S++ +PG GI S+ D R L P + +G+IIGK G ++ + +T+S I
Sbjct: 179 GTSRQMSPGS-----GIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKID 233
Query: 79 IS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
+ + G E+ ++I+S+ EG S A + + ++ + AD+
Sbjct: 234 VHRKENAGAAEKPISIHSTPEG----------CSAACRMILEIMNQEAKDTKTADE---- 279
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL------------- 184
+ +++L + +G +IGK G+ ++ + +T +I I + L L
Sbjct: 280 ---VPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSI 336
Query: 185 --CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH---LLLSSSSNIYQSSGVYL 239
C L+ E+++ E + + + H P + L SS+ + G +
Sbjct: 337 EACCLAEQEIMKKVRE--AYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSV 394
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P G G AS +E ++ + PA +G +IGK G IKQ+ + +GASIK+
Sbjct: 395 PGPPYGPMG--------ASEQE-TVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP 445
Query: 300 SGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQI 358
+ A + I T P A R+ + E+ + V + T I V +A
Sbjct: 446 AEAPDSKMRMVIVTG----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAA 501
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
G +IG+GG ++E+++ T A + ++ E P D+ +V+I G +S L+Q +R
Sbjct: 502 GRVIGKGGKTVNELQNLTAAEV-VVPREQTPD--EHDQVIVKIIGHF--YASQLAQRKIR 556
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT----IPYQ 184
Query: 441 PM 442
PM
Sbjct: 185 PM 186
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 180/423 (42%), Gaps = 70/423 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N + E L + GE++L R+L + IG +IGKGG
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------------GEISL---RILAHNNLIGRIIGKGG 286
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + ++ V G + KA I+S+L +E
Sbjct: 287 TTIKKIMQDTDTKITVSSIND----INNFNLERIITVKGSIDNMSKAESMISSKLRQSYE 342
Query: 216 N------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRDE---AS 258
N P ++S++ Y S G+Y + P Y +
Sbjct: 343 NDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGTGPAPYPYQTSLPTQQGIPIGD 402
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+E + L P ++G +IG G I+ I + SGAS+K+ + E D + E
Sbjct: 403 TQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPV------EQQN 453
Query: 319 DPSPTITAALRLQPRCS----EKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAII 369
D TI + Q + EK E + D +T ILVPS Q+G +IG+GG +
Sbjct: 454 DRKVTIVGSPESQWKAQYLIFEKMREEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNV 513
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
E++ T + I+ L+ + + ++E VQI G SA R+RA + GA
Sbjct: 514 RELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA----QRRIRAMVLQSSGA 568
Query: 430 LAA 432
A
Sbjct: 569 PGA 571
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ + +G +IG+ G I+QI Q + A + V DS GA I +
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITI-------Y 238
Query: 318 EDPSPTITAALRLQPRCSEKTERES---GDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+P A ++ E T++E+ I+ RIL + IG +IG+GG I ++
Sbjct: 239 GNPENCTNACKKIM----EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
T I + + ++ + E ++ + GS+D S A S ++ +LR + A+A
Sbjct: 295 DTDTKITVSSINDINN--FNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQS 352
Query: 435 PVLPYV-PMSLDITDGSKYGNRDNQSRGRGNSYATGNLP 472
+ P + PM++ T G Y SRG G Y TG P
Sbjct: 353 LMFPGLHPMAMMSTAGMGYS-----SRGPG-LYGTGPAP 385
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 290 ESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVI 347
++GA +V G ++ +I +S++E +DP SPTI A + L + S E +
Sbjct: 530 QTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----L 585
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
TTR++VPS ++GC++G GG +I+EMR T A IR+ + + PK DEE+VQ
Sbjct: 586 TTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 638
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
VSP +AL +H + +LA++ +T R++VP++++GC++G+GG+VI +R
Sbjct: 562 VSPTIEALILLHSK---ASTLAENH-----QLTTRLVVPSNKVGCILGEGGKVITEMRRR 613
Query: 170 TRAQIRILKDEHLPLCALSFDELL 193
T A+IR+ P LSFDE L
Sbjct: 614 TGAEIRVYSKADKPK-YLSFDEEL 636
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
A + + RLV P+ +G ++G+GG +I ++R+ +GA I+V S
Sbjct: 580 AENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYS 622
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 66/420 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSE----DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
G S++ +PG GI S+ D R L P + +G+IIGK G ++ + +T+S I
Sbjct: 179 GTSRQMSPGS-----GIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKID 233
Query: 79 IS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
+ + G E+ ++I+S+ EG S A + + ++ + AD+
Sbjct: 234 VHRKENAGAAEKPISIHSTPEG----------CSAACRMILEIMNQEAKDTKTADE---- 279
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL------------- 184
+ +++L + +G +IGK G+ ++ + +T +I I + L L
Sbjct: 280 ---VPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSI 336
Query: 185 --CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH---LLLSSSSNIYQSSGVYL 239
C L+ E+++ E + + + H P + L SS+ + G +
Sbjct: 337 EACCLAEQEIMKKVRE--AYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSV 394
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P G G AS +E ++ + PA +G +IGK G IKQ+ + +GASIK+
Sbjct: 395 PGPPYGPMG--------ASEQE-TVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP 445
Query: 300 SGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQI 358
+ A + I T P A R+ + E+ + V + T I V +A
Sbjct: 446 AEAPDSKMRMVIVTG----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAA 501
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
G +IG+GG ++E+++ T A + ++ E P D+ +V+I G +S L+Q +R
Sbjct: 502 GRVIGKGGKTVNELQNLTAAEV-VVPREQTPD--EHDQVIVKIIGHF--YASQLAQRKIR 556
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 177/413 (42%), Gaps = 78/413 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G +K L +T+S + I + G E+ +TI+++ EG +
Sbjct: 118 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS---- 173
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+A + D + E DE I +++L +G +IGK G+ ++
Sbjct: 174 ---------EACRMILDIMQKEA----DETKSAEEIPLKILAHNSLVGRLIGKEGRNLKK 220
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
I +T +I I L+D L + + + V G KA V+I +L E + +
Sbjct: 221 IEQDTGTKITISPLQD----LTIYNPERTITVKGSTEACSKAQVEIMKKLREA-YENDVV 275
Query: 224 LLSSSSNI------------------------------------YQSSGVYLSAPLVGSY 247
++ +N+ + SS YLS L G+
Sbjct: 276 AVNQQANLIPGLNLNALGIFSTGLSMLPSTPGARGAAAATPYHPFASSSAYLSG-LYGAP 334
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ + + L P +G +IGK G IKQ+ + +GASIK+ + AEG D
Sbjct: 335 PGSAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDA 392
Query: 308 ---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIG 363
++ I+ P A R+ + E+ + V + I VPS G +IG
Sbjct: 393 SERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIG 447
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+GG ++E+++ T A + I+ + P E+EE +V+I G + +A ++
Sbjct: 448 KGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVKIIGHFFASQTAQRKI 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 23/170 (13%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
F S +A G PG + E V P + +G+IIGK G+ +KQL
Sbjct: 320 FASSSAYLSGLYGAPPGSAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAG 379
Query: 75 SNIRISETV-PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
++I+I+ P ER+V I E A F+ RI + L ++
Sbjct: 380 ASIKIAPAEGPDASERMVIITGPPE-----------------AQFKAQGRIFGK--LKEE 420
Query: 134 EF---GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
F E + + VP+ G VIGKGG+ + ++ T A++ + +D+
Sbjct: 421 NFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIVPRDQ 470
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
EF LR++ P +G +IGK G IK + +++ + + + +++GA + I +T E
Sbjct: 114 EFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGA-AEKPITIHATPEGC 172
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I ++ E E +S + I +IL ++ +G LIG+ G + ++ T
Sbjct: 173 SEACRMILDIMQ-----KEADETKSAEE-IPLKILAHNSLVGRLIGKEGRNLKKIEQDTG 226
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I +++ Y E + + GS + S A ++ +LR
Sbjct: 227 TKITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKKLR 267
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 55/223 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+ +R+LVP IGC+IG+GG ++ ++R +T+A I I K + P A S DEL++V+GE
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEAD 59
Query: 201 VVRKALVQIASRLHE----------NPSRSQHLLLSSSSNIYQSSGVYLSA--------- 241
+R ALVQI RL E N R L +++S ++Y SS + L A
Sbjct: 60 KLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSS-LPLPALLPHNQQIA 118
Query: 242 -----------------PLVGSYG---------------NYSARRDEASAREFSLRLVCP 269
P SYG +Y+++ E L + P
Sbjct: 119 PLGYDRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPR--LEMTVP 176
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
A I V+GK G + IR+ SGA I++ + + I +IS
Sbjct: 177 ASGISKVMGKHGTNLDNIRKISGAHIEIIEPKSSRHEHIAYIS 219
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+ R+LVP+ IGCLIGRGG+I+++MR T+A+I +++ + P+ A +E+V+++G D
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEAD 59
Query: 407 VASSALSQVTLRLR 420
AL Q+ LRLR
Sbjct: 60 KLRDALVQIILRLR 73
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 15/100 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L P + IG +IG+GG IV +R +TK+NI IS+ G R +S L E S
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISK---GDKPR-----RASSSDELVEVS 55
Query: 107 GEFVSPAQDAL----FRVHDRIVAE--DSLADDEFGELTL 140
GE +DAL R+ + ++ E +S D G+LT+
Sbjct: 56 GE-ADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTV 94
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 198/431 (45%), Gaps = 58/431 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 118 SRQGSPGSASKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 174
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + A+D+ +E I +
Sbjct: 175 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-EAQDTKFTEE------IPL 217
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 218 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 275
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD-------- 255
KA +I ++ E+ ++ + S + + G+ L+A +G +
Sbjct: 276 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNA--LGLFPPTPGMPPPTPGPPSA 330
Query: 256 --------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
E S E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 331 MAPPYPPLEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 389
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 390 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 445
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANT 423
++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 446 KTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH- 501
Query: 424 FEREGALAAHP 434
++ AL + P
Sbjct: 502 -HQQKALQSGP 511
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 185/418 (44%), Gaps = 77/418 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + + +D I +++L +G +IGK G+
Sbjct: 255 --------CSTACHMIMDIMQKEAVDTKVTED-------IPLKILAHNSLVGRLIGKEGR 299
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ I TET+ I L+D L + + + V G +A V+I +L +EN
Sbjct: 300 NLKKIEEDTETKITISSLQD----LTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYEN 355
Query: 217 P----SRSQHLL--LSSSSNIYQSSGVYLSAPLVGSYG---------------------- 248
++ +L+ LS S+ S+G+ + P G G
Sbjct: 356 DVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGL 415
Query: 249 -------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S + +A +E + L P +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 416 YGVPPASGISHQHTQAPEQEV-VYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--AP 472
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AE D ++ I+ P A R+ + E+ + + V + T I VPS+
Sbjct: 473 AESPDVTQRMVIITG-----PPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSA 527
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E+++ T A + I+ + P DE V+I+G + +A ++
Sbjct: 528 AGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDEVFVKISGHFFASQTAQRKI 582
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++ VY ++ P + +G+IIGK G+ +KQL ++I+I+ P +R+V I E
Sbjct: 434 QEVVYLFI-PTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPE-- 490
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 491 ---------------AQFKAQGRIFGK--LKEENFFTAKEEVKLETHIKVPSSAAGRVIG 533
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 534 KGGKTVNELQNLTSAEVIVPRDQ 556
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ P +G +IGK G IK I +++ + + + +++GA + I ST E
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGA-AEKPITIHSTPEGC 255
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
I ++ + ++ TE I +IL ++ +G LIG+ G + ++ T
Sbjct: 256 STACHMIMDIMQKEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTE 309
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I + +++ Y E + + GS++ A ++ +LR
Sbjct: 310 TKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLR 350
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 161/365 (44%), Gaps = 84/365 (23%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G+G T+ R L +++GSIIGK GE VK++R E+ + + ISE C ERI+TI S+
Sbjct: 22 GLGVTLTL-RLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST 78
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRI---VAEDSLADDEFGELT---LITVRMLVPADQ 151
D++FR I + ED A G ++ +T+R+++PA Q
Sbjct: 79 -----------------DSVFRAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQ 121
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
G +IGKGG I+ IR T AQI++ D L S + + ++G V + + I +
Sbjct: 122 CGSLIGKGGAKIKEIRESTGAQIQVAGD----LLPNSTERGVTISGNQDSVIQCVKLICT 177
Query: 212 RLHENPSR----------SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
+ E+P + S LL + + ++++S + PL YS + ++
Sbjct: 178 VILESPPKGATIPYRPTPSPAALLIAGNQVFEASD-FAPHPL------YSVTQGGLDLQQ 230
Query: 262 -FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
++L+ N G+ + Q+ + G S P
Sbjct: 231 AYALQ------NQYGIPHSELAKLHQLSVQQGLSP---------------------IAQP 263
Query: 321 SPTITAA---LRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ TI L P + T + S + +L+P+ IG +IGR G I+E+R +
Sbjct: 264 ASTIMPGKLLLHFLPSGMDSTSQTSQE------LLIPNDLIGSIIGRQGTKINEIRQVSG 317
Query: 378 ASIRI 382
A I+I
Sbjct: 318 AQIKI 322
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Query: 290 ESGASIKVDSSGAEG-DDCIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDPVI 347
++GA +V G ++ +I +S++E +DP SPTI A + L + S E +
Sbjct: 207 QTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQ----L 262
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
TTR++VPS ++GC++G GG +I+EMR T A IR+ + + PK DEE+VQ
Sbjct: 263 TTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 315
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRML 146
+ER++ + S E + VSP +AL +H ++ +LA++ +T R++
Sbjct: 223 EERLIVVSSQ-------EIPDDPVSPTIEALILLHSKV---STLAENH-----QLTTRLV 267
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
VP++++GC++G+GG+VI +R T A+IR+ P LSFDE L
Sbjct: 268 VPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPK-YLSFDEEL 313
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
A + + RLV P+ +G ++G+GG +I ++R+ +GA I+V S
Sbjct: 257 AENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYS 299
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 175/415 (42%), Gaps = 75/415 (18%)
Query: 39 IGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIY 94
IG+ T + R L +G+IIG+GG ++Q+ +T++ + + + V G E+ +TIY
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 199
Query: 95 SSSEG-TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
+ E TN A + V + + +D + +++L + IG
Sbjct: 200 GNPENCTN-----------ACRKILEVMQQEATNTNKSD--------VILKILAHNNLIG 240
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+IGK G I+ I +ET +I + + +++ ++ V G + KA QI+++L
Sbjct: 241 RIIGKEGNTIKRIMSETETKITV--------SSFNYERIITVKGSIENMSKAEAQISAKL 292
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF----------- 262
++ ++ L S + G++ A + + Y R S ++F
Sbjct: 293 RQS---FENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYPS 349
Query: 263 ---------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ L P +G +IG G I+ + + SGAS+KV S+ E
Sbjct: 350 TIPPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQGV 409
Query: 308 IIFISTKEFFEDPSPTIT------AALRLQPRCSEKTERESGDP-----VITTRILVPSA 356
+ + S +T + + Q +K E P +T ILVPS+
Sbjct: 410 VGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSS 469
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
Q+G +IGRGG+ + E++ T + I++ T + ED V I G SA
Sbjct: 470 QVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTD--GTEDTTTVHIIGHFLATQSA 522
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
EF LR++ + +G +IG+GG I+QI Q++ A + V D+ + +P
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRK----DNVGSLEKAITIYGNP 202
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A + L+ E T D ++ +IL + IG +IG+ G I + S T
Sbjct: 203 ENCTNACRKILEVMQQEATNTNKSDVIL--KILAHNNLIGRIIGKEGNTIKRIMSETETK 260
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE-GALAAHPPVLP 438
I + ++ E ++ + GS++ S A +Q++ +LR +FE + ++A + P
Sbjct: 261 ITV--------SSFNYERIITVKGSIENMSKAEAQISAKLR-QSFENDLQSMAPQTVMFP 311
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ G Y R
Sbjct: 312 GLHPMAMMSATGITYPGR 329
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 61/290 (21%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ + +
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGA---- 91
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
++ Q A+ + ++++E DD E VR++VP G +IGKGG
Sbjct: 92 ---------INEIQRAVELILSKLLSELHSEDDNDAEPK-TKVRLVVPNGSCGGIIGKGG 141
Query: 161 QVIQNIRTETRAQIRIL--------KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
I++ +++A I+I +++ L + +FDE + +A+ I S+
Sbjct: 142 VTIRSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQM----------RAIELIVSK 191
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLS--------------APLVGSYGNYSAR----- 253
L E+P +Q + ++ + GVY S AP + NY
Sbjct: 192 LAEDPHYAQSM-----NSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYNAVNYRPNGTAGG 246
Query: 254 --RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ R SL + +IG V+G+GG I +I Q SGA IK+ G
Sbjct: 247 KLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISDRG 296
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 29/170 (17%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
+R + G VIGKGG I + +SGA I++ + EFF +
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN-------------HEFFPGTTDR 84
Query: 324 I------------TAALRLQPRCSEKTERESGD--PVITTRILVPSAQIGCLIGRGGAII 369
I L L SE + D P R++VP+ G +IG+GG I
Sbjct: 85 IIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTI 144
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++A I+I +N +++ +V +TG+ D A+ + +L
Sbjct: 145 RSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKL 192
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 71/416 (17%)
Query: 39 IGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIY 94
IG+ T + R L +G+IIG+GG ++Q+ +T++ + + + V G E+ +TIY
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 199
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
+ E + A + V + + +D + +++L + IG
Sbjct: 200 GNPEN----------CTNACRKILEVMQQEATNTNKSD--------VILKILAHNNLIGR 241
Query: 155 VIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
+IGK G I+ I +ET +I + + D + + +++ ++ V G + KA QI+++
Sbjct: 242 IIGKEGNTIKRIMSETETKITVSSIND----INSFNYERIITVKGSIENMSKAEAQISAK 297
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF---------- 262
L ++ ++ L S + G++ A + + Y R S ++F
Sbjct: 298 LRQS---FENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYP 354
Query: 263 ----------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ L P +G +IG G I+ + + SGAS+KV S+ E
Sbjct: 355 STIPPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQG 414
Query: 307 CIIFISTKEFFEDPSPTIT------AALRLQPRCSEKTERESGDP-----VITTRILVPS 355
+ + S +T + + Q +K E P +T ILVPS
Sbjct: 415 VVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPS 474
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
+Q+G +IGRGG+ + E++ T + I++ T + ED V I G SA
Sbjct: 475 SQVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTD--GTEDTTTVHIIGHFLATQSA 528
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
EF LR++ + +G +IG+GG I+QI Q++ A + V D+ + +P
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRK----DNVGSLEKAITIYGNP 202
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A + L+ E T D ++ +IL + IG +IG+ G I + S T
Sbjct: 203 ENCTNACRKILEVMQQEATNTNKSDVIL--KILAHNNLIGRIIGKEGNTIKRIMSETETK 260
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE-GALAAHPPVLP 438
I + + ++ YE ++ + GS++ S A +Q++ +LR +FE + ++A + P
Sbjct: 261 ITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLR-QSFENDLQSMAPQTVMFP 317
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ G Y R
Sbjct: 318 GLHPMAMMSATGITYPGR 335
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 185/418 (44%), Gaps = 77/418 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 43 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 100
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + + +D I +++L +G +IGK G+
Sbjct: 101 --------CSTACHMIMDIMQKEAVDTKVTED-------IPLKILAHNSLVGRLIGKEGR 145
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ I TET+ I L+D L + + + V G +A V+I +L +EN
Sbjct: 146 NLKKIEEDTETKITISSLQD----LTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYEN 201
Query: 217 P----SRSQHLL--LSSSSNIYQSSGVYLSAPLVGSYG---------------------- 248
++ +L+ LS S+ S+G+ + P G G
Sbjct: 202 DVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGL 261
Query: 249 -------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S + +A +E + L P +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 262 YGVPPASGISHQHTQAPEQEV-VYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--AP 318
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AE D ++ I+ P A R+ + E+ + + V + T I VPS+
Sbjct: 319 AESPDVTQRMVIITG-----PPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSA 373
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E+++ T A + I+ + P DE V+I+G + +A ++
Sbjct: 374 AGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDEVFVKISGHFFASQTAQRKI 428
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++ VY ++ P + +G+IIGK G+ +KQL ++I+I+ P +R+V I E
Sbjct: 280 QEVVYLFI-PTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPE-- 336
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 337 ---------------AQFKAQGRIFGK--LKEENFFTAKEEVKLETHIKVPSSAAGRVIG 379
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 380 KGGKTVNELQNLTSAEVIVPRDQ 402
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ P +G +IGK G IK I +++ + + + +++GA + I ST E
Sbjct: 43 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGA-AEKPITIHSTPEGC 101
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
I ++ + ++ TE I +IL ++ +G LIG+ G + ++ T
Sbjct: 102 STACHMIMDIMQKEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTE 155
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I + +++ Y E + + GS++ A ++ +LR
Sbjct: 156 TKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLR 196
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 185/418 (44%), Gaps = 77/418 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEG-- 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + + +D I +++L +G +IGK G+
Sbjct: 255 --------CSTACHMIMDIMQKEAVDTKVTED-------IPLKILAHNSLVGRLIGKEGR 299
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ I TET+ I L+D L + + + V G +A V+I +L +EN
Sbjct: 300 NLKKIEEDTETKITISSLQD----LTIYNPERTIIVKGSIEACCRAEVEIMKKLREAYEN 355
Query: 217 P----SRSQHLL--LSSSSNIYQSSGVYLSAPLVGSYG---------------------- 248
++ +L+ LS S+ S+G+ + P G G
Sbjct: 356 DVAAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGPRGIPPVPPTGYNPFLGHSSQLGGL 415
Query: 249 -------NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S + +A +E + L P +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 416 YGVPPASGISHQHTQAPEQEV-VYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--AP 472
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AE D ++ I+ P A R+ + E+ + + V + T I VPS+
Sbjct: 473 AESPDVTQRMVIITG-----PPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSA 527
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E+++ T A + I+ + P DE V+I+G + +A ++
Sbjct: 528 AGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDEVFVKISGHFFASQTAQRKI 582
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++ VY ++ P + +G+IIGK G+ +KQL ++I+I+ P +R+V I E
Sbjct: 434 QEVVYLFI-PTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPE-- 490
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 491 ---------------AQFKAQGRIFGK--LKEENFFTAKEEVKLETHIKVPSSAAGRVIG 533
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 534 KGGKTVNELQNLTSAEVIVPRDQ 556
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ P +G +IGK G IK I +++ + + + +++GA + I ST E
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGA-AEKPITIHSTPEGC 255
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
I ++ + ++ TE I +IL ++ +G LIG+ G + ++ T
Sbjct: 256 STACHMIMDIMQKEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTE 309
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I + +++ Y E + + GS++ A ++ +LR
Sbjct: 310 TKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLR 350
>gi|307187117|gb|EFN72361.1| Far upstream element-binding protein 1 [Camponotus floridanus]
Length = 690
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 22/260 (8%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P + +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 97 GICNEDI----RVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSR 152
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIG 157
E N ++ + + + D ++ S + G + V +++P ++G +IG
Sbjct: 153 EAVNRAKELVLSIVNQRSRSEGIGDINMSSASASGGNGGMIHPGFVEIMIPGPKVGLIIG 212
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
KGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A +
Sbjct: 213 KGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVY------- 261
Query: 218 SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
L+ ++ G G+Y N S+ + A + ++ P +G VI
Sbjct: 262 ----ELIAEKEMQMFHRGG--RGTERTGNYSNDSS-FNHGPANSDGVEVLVPRAAVGVVI 314
Query: 278 GKGGGIIKQIRQESGASIKV 297
GKGG +IK+I+ ESGA ++
Sbjct: 315 GKGGDMIKKIQAESGAKVQF 334
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 112/261 (42%), Gaps = 56/261 (21%)
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPAVVR 203
VP +G +IG+GG+ I +++ET +I++ + LP +C L+ R
Sbjct: 105 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGS------------R 152
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV----YLSAPLVGSYGNYSARRDEASA 259
+A+ +R++ L+LS + +S G+ SA G G
Sbjct: 153 EAV-----------NRAKELVLSIVNQRSRSEGIGDINMSSASASGGNGGM--------I 193
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----------GDDCII 309
+ ++ P +G +IGKGG IKQ++++SGA + V G GD +
Sbjct: 194 HPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKV 253
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT--------TRILVPSAQIGCL 361
+ + +E + R +E+T S D +LVP A +G +
Sbjct: 254 EYAKQLVYELIAEKEMQMFHRGGRGTERTGNYSNDSSFNHGPANSDGVEVLVPRAAVGVV 313
Query: 362 IGRGGAIISEMRSATRASIRI 382
IG+GG +I ++++ + A ++
Sbjct: 314 IGKGGDMIKKIQAESGAKVQF 334
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 31/261 (11%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNI---RISETVPGCDERIVTIYSS 96
G + + ++L GSIIGKGG + +L+S++ + + R SE PG ER++ S
Sbjct: 38 GEQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGS 97
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
V+ AL + +I E S+ + G+ T +R+LVP G +I
Sbjct: 98 -------------VNQVLTALHLILTKIQGEQSMMARD-GKST--QLRLLVPTPLCGAII 141
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG I++ ++RA I + + PL D ++++ G + +A+ + ++L E+
Sbjct: 142 GKGGATIRSFAEDSRAAITVSPQDKQPLGI--PDRVVRITGAQDQLLRAVALLLTKLVES 199
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
P+ ++ ++SN+ Y P Y + + R + + P +G +
Sbjct: 200 PNYTRF----TTSNVS-----YGPPPQHMGYQQKGYMQPQQQQR-MEVTVPVPEARVGAI 249
Query: 277 IGKGGGIIKQIRQESGASIKV 297
IGKGG +I Q++ G I++
Sbjct: 250 IGKGGEVISQLKSVIGVKIRI 270
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLFE 104
P ++G+IIGKGGE++ QL+S IRIS+ VPG R VTI +++ + +
Sbjct: 241 VPEARVGAIIGKGGEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAVQIAQ 298
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 30/184 (16%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS---------------SGAEGD--D 306
LRL+ P G +IGKGG I+ ++S A+I V +GA+
Sbjct: 128 LRLLVPTPLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLR 187
Query: 307 CIIFISTKEFFEDPSPT--ITAALRLQPRCSEKTERESG--DPVITTR----ILVPSAQI 358
+ + TK E P+ T T+ + P ++ G P R + VP A++
Sbjct: 188 AVALLLTK-LVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRMEVTVPVPEARV 246
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
G +IG+GG +IS+++S IRI ++ V V I+G+ D ++QV +
Sbjct: 247 GAIIGKGGEVISQLKSVIGVKIRISDRDDF--VPGTRNRKVTISGAADAVQ--IAQVLIH 302
Query: 419 LRAN 422
+ N
Sbjct: 303 QKIN 306
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 255 DEASAREFSL--RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
DE +A E + + + G +IGKGG I +++ +SGA +++ S +E F
Sbjct: 33 DEGTAGEQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARLQL-SRASE-----FFPG 86
Query: 313 TKEFFEDPSPTITAALR-----LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGA 367
T+E S ++ L L E++ R+LVP+ G +IG+GGA
Sbjct: 87 TQERVMLASGSVNQVLTALHLILTKIQGEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGA 146
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
I +RA+I + + P + D +V+ITG+ D A++ + +L
Sbjct: 147 TIRSFAEDSRAAITVSPQDKQP-LGIPD-RVVRITGAQDQLLRAVALLLTKL 196
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 131/283 (46%), Gaps = 50/283 (17%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSS 96
G T R+L GS+IGKGG + ++++ + I++S E PG +R+ + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++ A + +I+ +D+ D + I V++LVP G +I
Sbjct: 71 -------------LADVLTAFQLIISKIIKDDNQDDTKS-----IQVKLLVPKTVCGAII 112
Query: 157 GKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
GKGG I+ +++A I++ +D+ LP D ++ + G + KA+ I ++L E
Sbjct: 113 GKGGSNIKKFVEDSQASIKLSSQDQLLPGV---IDRIVTIGGNVDQIIKAVTLILTKLTE 169
Query: 216 NPSRSQHLLLSSSSNIYQSSG--------VYLSAPLVGSYGNYSARRD---------EAS 258
S ++ +S+ +Y +G VY ++P G + RR+
Sbjct: 170 ESSYTET---TSTPLVYPGTGPTPFIVRCVYHASP-----GLQNLRRNGPGPPMPVAYVG 221
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
A S+ + P +IG ++G+ G +++++Q SGA IKV G
Sbjct: 222 ALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRG 264
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS- 321
+LR + G VIGKGG I + +SGA I++ + E+F S
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 322 ---------PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
+ A +L K + + I ++LVP G +IG+GG+ I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 373 RSATRASIRILTNEN-VPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ASI++ + + +P V + +V I G++D A++ + +L
Sbjct: 123 VEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKL 167
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 70 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 125
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 126 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGSSTI--QELLIPAS 173
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 174 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 230
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R SL + P
Sbjct: 231 EIIREKD----------------------QADFRGVRGDFSSRMGGG-----SLEVSVPR 263
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 264 FAVGIVIGRNGEMIKKIQNDAGVRIQ 289
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 32/273 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + +
Sbjct: 164 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 223
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + D + ++ + VP +G VIG+ G
Sbjct: 224 QAREMVLEIIREKDQADFR---------GVRGDFSSRMGGGSLEVSVPRFAVGIVIGRNG 274
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + QV G P + A I + R
Sbjct: 275 EMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQHAAHVINELILTAQERD 329
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
L+ + + G + VG+ G + PA G VIGKG
Sbjct: 330 GFGGLAVARGRGRGRGDWS----VGTPGGVQ-----------EITYTVPADKCGLVIGKG 374
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G IK I Q+SGA +++ + D + I T
Sbjct: 375 GENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 407
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 78 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 129
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + SS I +
Sbjct: 130 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDVDGSSTIQE-------------------- 167
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 168 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 215
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLIG 363
+ F + + +R + + + R GD ++R + VP +G +IG
Sbjct: 216 TGDPFKVQQAREMVLEIIREKDQADFRGVR--GD--FSSRMGGGSLEVSVPRFAVGIVIG 271
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G +I ++++ I+ ++ + E Q+ G D A + V L
Sbjct: 272 RNGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTA 325
Query: 424 FEREG 428
ER+G
Sbjct: 326 QERDG 330
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 71/416 (17%)
Query: 39 IGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIY 94
IG+ T + R L +G+IIG+GG ++Q+ +T++ + + + V G E+ +TIY
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 199
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
+ E + A + V + + +D + +++L + IG
Sbjct: 200 GNPEN----------CTNACRKILEVMQQEATNTNKSD--------VILKILAHNNLIGR 241
Query: 155 VIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
+IGK G I+ I +ET +I + + D + + +++ ++ V G + KA QI+++
Sbjct: 242 IIGKEGNTIKRIMSETETKITVSSIND----INSFNYERIITVKGSIENMSKAEAQISAK 297
Query: 213 LHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF---------- 262
L ++ ++ L S + G++ A + + Y R S ++F
Sbjct: 298 LRQS---FENDLQSMAPQTVMFPGLHPMAMMSATGITYPGRGGPTSYQQFAPAPYPPMYP 354
Query: 263 ----------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ L P +G +IG G I+ + + SGAS+KV S+ E
Sbjct: 355 STIPPINPALAADVQETAFLFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVASTENEKQG 414
Query: 307 CIIFISTKEFFEDPSPTIT------AALRLQPRCSEKTERESGDP-----VITTRILVPS 355
+ + S +T + + Q +K E P +T ILVPS
Sbjct: 415 VVGNAGDANSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPS 474
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
+Q+G +IGRGG+ + E++ T + I++ T + ED V I G SA
Sbjct: 475 SQVGRIIGRGGSNVRELQRVTGSIIKLPTQGSTD--GTEDTTTVHIIGHFLATQSA 528
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
EF LR++ + +G +IG+GG I+QI Q++ A + V D+ + +P
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRK----DNVGSLEKAITIYGNP 202
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A + L+ E T D ++ +IL + IG +IG+ G I + S T
Sbjct: 203 ENCTNACRKILEVMQQEATNTNKSDVIL--KILAHNNLIGRIIGKEGNTIKRIMSETETK 260
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE-GALAAHPPVLP 438
I + + ++ YE ++ + GS++ S A +Q++ +LR +FE + ++A + P
Sbjct: 261 ITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLR-QSFENDLQSMAPQTVMFP 317
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ G Y R
Sbjct: 318 GLHPMAMMSATGITYPGR 335
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 41/251 (16%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPS 321
RLV +GG+IG+ G I+++ +E+ A ++V + G G ++ +T+E + +
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAELA 148
Query: 322 PTITAALRLQPRCSE-------KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
P + AA+++ +E T S + + R+LVP Q LIG+ G +I ++
Sbjct: 149 PAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQE 208
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA--------NTFER 426
T ++IRI+ +++ DE +V+I G+ A +AL V LR + FER
Sbjct: 209 TTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHSVLHLFER 268
Query: 427 EGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLP-GRDSYGSYGGS-L 484
+ AH + DI+ ++NQ N YA LP RD S G S L
Sbjct: 269 KNQAIAH---------AQDIS-------KENQV---SNDYA---LPVSRDLLLSDGQSPL 306
Query: 485 SGGGNAYGAYG 495
S GN Y +YG
Sbjct: 307 SPKGNRYLSYG 317
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 50/311 (16%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
+V+R + K+G +IG+ GE +++L ET++ +R+ + G + + + S++E T
Sbjct: 87 SVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQ-- 144
Query: 104 EDSGEFVSPAQDA---LFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
++PA DA +F+ + I ++ + + R+LVP +Q +IGK G
Sbjct: 145 ----AELAPAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQG 200
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP-----------AVVRKALVQI 209
+I++I+ T + IRI+ + L + + ++++ G ++RK LV
Sbjct: 201 IMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVD- 259
Query: 210 ASRLHENPSRSQ------------------------HLLLSSSSNIYQSSG-VYLS---- 240
S LH ++Q LLLS + G YLS
Sbjct: 260 HSVLHLFERKNQAIAHAQDISKENQVSNDYALPVSRDLLLSDGQSPLSPKGNRYLSYGRD 319
Query: 241 APLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
+ Y + E+ ++ + + P +IG GG I IR SGA + ++ +
Sbjct: 320 PSVCDPYSSQIRHPTESLIKKITQTMKIPLPQADEIIGVGGRNIAHIRSVSGAIVVLEET 379
Query: 301 GAEGDDCIIFI 311
G ++ ++ I
Sbjct: 380 GDYLNEVLVTI 390
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 178/396 (44%), Gaps = 59/396 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K L +T+S + I + G E+ +TI+++ EG
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEG-- 249
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + E A++ I +++L +G +IGK G+
Sbjct: 250 --------CSEACRMILDIMQKEAEETKSAEE-------IPLKILAHNSLVGRLIGKEGR 294
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE---- 215
++ I +T +I I L+D L + + + V G A +I ++L E
Sbjct: 295 NLKKIEQDTGTKITISPLQD----LTIYNPERTITVKGSIEACSNAEAEIMNKLREAYEN 350
Query: 216 ---NPSRSQHLLLSSSSN---IYQS------SGVYLSAPLVGS-YGNYSARRDEASAREF 262
++ +L+ + N I+ + SG + P V + Y ++ E
Sbjct: 351 DIVTVNQQANLIPGLNLNALGIFSTGLSMLPSGTGVRRPAVSTPYNPFAVPEQEV----- 405
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPS 321
+ L P +G +IGK G IKQ+ + +GASIK+ + E + ++ I+ P
Sbjct: 406 -VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITG-----PPE 459
Query: 322 PTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A +
Sbjct: 460 AQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV 519
Query: 381 RILTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
I+ + P E+EE +V+I G + +A ++
Sbjct: 520 -IVPRDQTPD---ENEEVVVKIIGHFFASQTAQRKI 551
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ P +G +IGK G IK + +++ + + + +++GA + I +T E
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGA-AEKPITIHATPEGC 250
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I L + + +E+T+ P+ +IL ++ +G LIG+ G + ++ T
Sbjct: 251 SEACRMI---LDIMQKEAEETKSAEEIPL---KILAHNSLVGRLIGKEGRNLKKIEQDTG 304
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I +++ Y E + + GS++ S+A +++ +LR
Sbjct: 305 TKITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLR 345
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 43/212 (20%)
Query: 35 EQRGIGSEDT-VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
E R G T V+R L P K+G++IG GE +++L ETK+ +R+ ER V I
Sbjct: 230 ENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVII 289
Query: 94 YSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
++ E E PA DAL RV++ + +D L D + ++ R+L P++Q
Sbjct: 290 FAK-------EQPDEPKPPAIDALLRVYECTINDDGL-DVRYN--NIVVARILTPSEQAA 339
Query: 154 CVIGKGGQVIQNIRTETRAQIRIL--------------------------------KDEH 181
+IG G VI I+ ++ I ++ D
Sbjct: 340 SLIGDQGSVINYIKKASKTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGD 399
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
LP AL D ++++ G PA V +AL +A L
Sbjct: 400 LPPVALEDDMIIEIWGLPARVHQALELVACHL 431
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 44/232 (18%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
R++ PA +G VIG G ++++ +E+ A ++V + + I KE ++P P
Sbjct: 242 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 301
Query: 324 ITAALRLQPRCSEKTERESG-----DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
AL R E T + G + ++ RIL PS Q LIG G++I+ ++ A++
Sbjct: 302 AIDALL---RVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKT 358
Query: 379 SIRILTNE--------------------------------NVPKVAYEDEEMVQITGSLD 406
+I ++ N ++P VA ED+ +++I G
Sbjct: 359 NIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLPA 418
Query: 407 VASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQ 458
AL V LR R + P P+V + + D + D+
Sbjct: 419 RVHQALELVACHLRKYLVHR----SVIPLFDPHVSIPISPVDMPPFHYSDHH 466
>gi|405969780|gb|EKC34731.1| Far upstream element-binding protein 3 [Crassostrea gigas]
Length = 772
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 162/424 (38%), Gaps = 93/424 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
Y P + +G IIGKGGE + +L++ET I+I+ G +R T+ SS +
Sbjct: 196 EYAIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMPDRQCTLTGSSGAIAACKQQ 255
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL----------------ITVRMLVPAD 150
QD + R + D G V M+VP +
Sbjct: 256 ------IQDIIMRANQTGGPMMGGMDGNGGGFGGGGGGGGGGGMGNGGGQTVVEMMVPGN 309
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ ++ +++D ++P A ++ L+++G+P ++A +
Sbjct: 310 KVGLVIGKGGETIKQLQERAGVKMVMIQDSNIPSAA---EKPLRISGDPQKCQRAKEMVL 366
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
L E + + + YG+Y E + P
Sbjct: 367 DLLAEKEMENMNKGFN-------------------DYGSYGGGGGGGPPMEIPV----PR 403
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G VIGK G +IK+I+QESGA ++ + + + I+ P AA +
Sbjct: 404 TAVGIVIGKNGDMIKKIQQESGAKVQFKADDGNSPERVCAIAG-----SPDKVQIAAQMI 458
Query: 331 QPRCSEKTERESGDPVIT------------------------------------TRILVP 354
Q ++ +RE G T+ VP
Sbjct: 459 QELLNDYNQREGGMGRGFGGGRGRGGPGRGRGGFGGGPGRGMGRGDGFGGFQDETQFAVP 518
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ + G +IG+GG I ++ + A + + + +E++ I G D A+
Sbjct: 519 ADKCGLVIGKGGETIRQINQQSGAHVELQKHPG----PNPNEKLFNIKGGPDQIQHAIQM 574
Query: 415 VTLR 418
++ +
Sbjct: 575 ISEK 578
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Query: 112 PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
PAQ+A+ + IV D+ +IT R+LVPA +I C G+ G + +I+ +T
Sbjct: 162 PAQEAVLHIQTHIVDLGPDMDN------IITTRLLVPASEIACFDGREGS-LSDIQRQTS 214
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
A ++IL E LP CAL DEL+Q+ GE R AL+Q+ ++L
Sbjct: 215 ANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKL 256
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
D +ITTR+LVP+++I C GR G++ S+++ T A+++IL E++P A E +E++QI G
Sbjct: 182 DNIITTRLLVPASEIACFDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVG 240
Query: 404 SLDVASSALSQVTLRLRANTF 424
+ A +AL QVT +LR+ +
Sbjct: 241 EIKAARNALIQVTTKLRSFLY 261
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 25/267 (9%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ + S
Sbjct: 35 TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSI--- 91
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E + + L ++ + AE+ D+ T VR++VP G +IGKGG
Sbjct: 92 ------NEILKAMELVLAKLLSELHAEEG---DDVEPRT--KVRLIVPHSSCGAIIGKGG 140
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++ +++A I+I ++ + S D L+ ++G +A I S+L E+P +
Sbjct: 141 STIKSFIEDSQAGIKISPQDNNYMA--STDRLVTLSGTIEEQMRATDLIVSKLSEDPHYT 198
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA------REFSLRLVCPAGNIG 274
Q + S ++ Y S + + D S+ R SL + G+IG
Sbjct: 199 QSMNYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEERNNSLTIGVSDGHIG 258
Query: 275 GVIGKGGGIIKQIRQESGASIKVDSSG 301
V+G+GG I +I Q SGA IK+ G
Sbjct: 259 LVVGRGGRNILEISQASGARIKISDRG 285
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 17/164 (10%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFIS--TKEFF 317
+R + G VIGKGG I + +SGA I++ S E D II +S E
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQL-SRNHEFFPGTTDRIIMVSGSINEIL 95
Query: 318 EDPSPTITAALRLQPRCSEKTERESGD--PVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ L L SE E D P R++VP + G +IG+GG+ I
Sbjct: 96 K------AMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIED 149
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++A I+I +N + +V ++G+++ A + +L
Sbjct: 150 SQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRATDLIVSKL 191
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 58/403 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T S I I + G E+ +TI+S+ +G +
Sbjct: 194 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPDGCS 253
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + D I+ +++L D +F E I +++L +G +IGK G+
Sbjct: 254 -------------NACKTIMD-IMQKEAL-DTKFTEE--IPLKILAHNSFVGRLIGKEGR 296
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I ET +I I L+D L + + + V G KA ++ ++ E+
Sbjct: 297 NLKKIEQETGTKITISPLQD----LTLYNPERTITVKGSIEACAKAEEEVMKKIRES-YE 351
Query: 220 SQHLLLSSSSNI-----YQSSGVY-LSAPLVG-SYGNYSARRDEASAREF-------SLR 265
S ++ SN+ + G++ +AP +G S + + + F ++
Sbjct: 352 SDMAAMNLQSNLIPGLNLNALGLFPTTAPGMGPSMSSITPPGAHGGSSSFGGHPESETVH 411
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC----IIFISTKEFFEDPS 321
L PA +G +IGK G IKQ+ +GASIK+ + AEG D +I + P
Sbjct: 412 LFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQRMVIIVGP------PE 463
Query: 322 PTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A R+ + E+ + V + I VP+ G +IG+GG ++E+++ T A +
Sbjct: 464 AQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPAFAAGRVIGKGGKTVNELQNLTCAEV 523
Query: 381 RILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLR 420
++ + P D+ +V+I+G +A + ++ ++R
Sbjct: 524 -VVPRDQTPD--ENDQVIVKISGHFFACQLAQRKIQEILAQVR 563
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 157/391 (40%), Gaps = 81/391 (20%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD-IQSGGGVPRPP------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN-- 230
I Q+AS + N S + + +S +S
Sbjct: 136 SI---------------------------------QVASEMLPN-STERAVTISGTSEAI 161
Query: 231 ---IYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
IY V L +P G+ Y P +GG + GG I
Sbjct: 162 TQCIYHICCVMLESPPKGATIPYR-----------------PKPQVGGPLILAGGQAYTI 204
Query: 288 RQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL---------QPRCSEKT 338
+ D G G + + ++ +P T L Q R S
Sbjct: 205 QGNYAVPAHSDM-GKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTN 263
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEM 398
++ T + VP+ IGC+IG+GG I+E+R + A IRI E + +
Sbjct: 264 RQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRT 321
Query: 399 VQITGSLDVASSA--LSQVTLRLRANTFERE 427
+ ITG+ D + A L +++ L+ E +
Sbjct: 322 ITITGNPDAVALAQYLISMSVELQKANLEAQ 352
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + +SG P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ +E +P E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQV-ASEMLPN---STERAVTISGT----SEAITQCIYHICCVMLE-------SPPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + A+ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DNMDAKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S+ + QS G
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDI---------QSGGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
>gi|322790271|gb|EFZ15270.1| hypothetical protein SINV_11556 [Solenopsis invicta]
Length = 744
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 164/398 (41%), Gaps = 73/398 (18%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P + +G IIG+GGE + +L+SET I+++ G ER+ T+ S
Sbjct: 99 GICNEDI----RVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSR 154
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT-------------VR 144
E N A++ + + ++ + + D V
Sbjct: 155 EAVNR----------AKELVLSIVNQRSRSEGIGDMNMSSGGGGGGGGSGGMMGHPGFVE 204
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
+++P ++G +IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V
Sbjct: 205 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEY 260
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A + + E + H + + Y N S + A +
Sbjct: 261 AKQLVYELIAEKEMQMFHRGGRGGGGGGGTDRTGGN------YSNDSGF-NHGPANSDGV 313
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFE 318
++ P +G VIGKGG +IK+I+ ESGA ++ +G C++ + ++ +
Sbjct: 314 EVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLLSGKHQAVEQARQ 373
Query: 319 DPSPTITAALR----------------------LQPRCSEKTERESGDPV---ITTRILV 353
I + +R P +R G P+ I T V
Sbjct: 374 RIQELIDSVMRRDDGRNNMGGRGGPRGNGFGNNRNPNEYGSWDRRQGGPMQDKIETTFTV 433
Query: 354 PSAQIGCLIGRGGAIISEMRSATRASIRI----LTNEN 387
PS++ G +IG+GG I ++ T A + +NEN
Sbjct: 434 PSSKCGIIIGKGGETIKQINQQTGAHCELDRKNQSNEN 471
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 20/277 (7%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I + +
Sbjct: 206 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 265
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLA---------DDEF--GELTLITVRMLVPADQIGCV 155
E ++ + +F R D F G V +LVP +G V
Sbjct: 266 YELIAEKEMQMFHRGGRGGGGGGGTDRTGGNYSNDSGFNHGPANSDGVEVLVPRAAVGVV 325
Query: 156 IGKGGQVIQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
IGKGG +I+ I+ E+ A+++ + E P D ++G+ V +A +I L
Sbjct: 326 IGKGGDMIKKIQAESGAKVQFQQGREDGP-----GDRKCLLSGKHQAVEQARQRI-QELI 379
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
++ R + + + YG++ R+ + P+ G
Sbjct: 380 DSVMRRDDGRNNMGGRGGPRGNGFGNNRNPNEYGSWDRRQGGPMQDKIETTFTVPSSKCG 439
Query: 275 GVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 440 IIIGKGGETIKQINQQTGAHCELDRKNQSNENEKIFI 476
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 166/390 (42%), Gaps = 74/390 (18%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
GI +ED P +G IIG+GGE + +L+SET I+++ + G ER+ T+ S
Sbjct: 106 GICNEDI----RVPDNMVGLIIGRGGEQITRLQSETGCKIQMA-SESGLPERVCTLTGSR 160
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT---VRMLVPADQIGC 154
E N + E V L V+ R E + V +++P ++G
Sbjct: 161 EAVNRAK---ELV------LSIVNQRSRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGL 211
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+IGKGG+ I+ ++ ++ A++ ++++ + ++ L++ G+P V A + +
Sbjct: 212 IIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYELIA 267
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS--ARRDEASAREFSLRLVCPAGN 272
E + + S +S GNYS + + S + ++ P
Sbjct: 268 E---KEMQMFHRGSRGSDRS-------------GNYSNDSNFNHGSGTTDGVEVLVPRAA 311
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD---DCII---FISTKEFFEDPSPTITA 326
+G VIGKGG +IK+I+ E+GA ++ +G CI+ + ++ + I +
Sbjct: 312 VGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDS 371
Query: 327 ALR----------------------LQPRCSEKTERESGDPV---ITTRILVPSAQIGCL 361
+R P +R G P+ I T VPS++ G +
Sbjct: 372 VMRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQGGPMQDKIETTFTVPSSKCGII 431
Query: 362 IGRGGAIISEMRSATRASI----RILTNEN 387
IG+GG I ++ T A R +NEN
Sbjct: 432 IGKGGETIKQINQQTGAHCELDRRNQSNEN 461
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 35/281 (12%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + P + E+ + I + +
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 107 GEFVSPAQDALF----RVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E ++ + +F R DR + ++ G T V +LVP +G VIGKGG +
Sbjct: 263 YELIAEKEMQMFHRGSRGSDRSGNYSNDSNFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 322
Query: 163 IQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
I+ I+ ET A+++ + E P D V+G+ +A+ Q+ R+ E
Sbjct: 323 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGK----HQAVEQVRQRIQE------ 367
Query: 222 HLLLSS-------SSNIYQSSGV----YLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
L+ S SN+ SG + + YG + R+ + P+
Sbjct: 368 --LIDSVMRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQGGPMQDKIETTFTVPS 425
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
G +IGKGG IKQI Q++GA ++D ++ IFI
Sbjct: 426 SKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFI 466
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 177/397 (44%), Gaps = 56/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E T
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 245
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N + E + +++ + GE+TL ++L + IG +IGKGG
Sbjct: 246 NACKKILEVMQQEANSINK----------------GEITL---KILAHNNLIGRIIGKGG 286
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + + ++ V G + KA I+S+L +E
Sbjct: 287 TTIKRIMQDTDTKITVSSIND----INSFNLERIITVKGTIENMSKAESMISSKLRQSYE 342
Query: 216 N------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRD--EASA 259
N P ++S++ Y S G+Y S P Y + A+
Sbjct: 343 NDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQGVPATD 402
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
+ + L P ++G +IG G I+ I + SGAS+K+ + E D + ++
Sbjct: 403 TQETAFLYIPNSSVGAIIGTKGSHIRNIIRFSGASVKI--APIEQDKPAEQQTERKVTIV 460
Query: 320 PSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
SP + + Q EK E + D +T ILVPSAQ+G +IG+GG + E++
Sbjct: 461 GSPE--SQWKAQYLIFEKMREEGFVAGTDDVRLTIEILVPSAQVGRIIGKGGQNVRELQR 518
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
T + I+ L+ + + ++E V I G SA
Sbjct: 519 VTGSIIK-LSEQQSTSPSADEEATVHIIGPFFSVQSA 554
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--DDCIIFISTKEFFE 318
+F LR++ + +G +IG+ G I+QI Q + A + V G + I E
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 245
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
+ I ++ + K E IT +IL + IG +IG+GG I + T
Sbjct: 246 NACKKILEVMQQEANSINKGE-------ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDT 298
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + ++ ++ E ++ + G+++ S A S ++ +LR + A+A + P
Sbjct: 299 KITVSSINDIN--SFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFP 356
Query: 439 YV-PMSLDITDGSKYGNR 455
+ PM++ T G Y +R
Sbjct: 357 GLHPMAMMSTAGMGYSSR 374
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 33/183 (18%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 65
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIG 157
+A+F+ I+ D L +D +T +T+R++VPA Q G +IG
Sbjct: 66 ---------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIG 114
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
KGG I+ IR T AQ+++ D LP S + + +AG P + + + QI + E
Sbjct: 115 KGGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKQICVVMLETL 170
Query: 218 SRS 220
S+S
Sbjct: 171 SQS 173
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD V IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD--VPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 140
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ E LP S + + ++G + + + I + E+P +
Sbjct: 141 SIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLESPPK 183
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE---- 303
N D+ S ++RL+ +G +IGK G I+K+ R+ESGA I + D S E
Sbjct: 6 NKPVLNDDPSV-TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVT 64
Query: 304 --GDDCIIF----ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQ 357
G IF + K+F E + P P IT R++VP++Q
Sbjct: 65 VTGPTNSIFKAFTLICKKFEE-----WCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQ 119
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL 417
G LIG+GG+ I E+R T ASI++ +E +P E V I+G+ S A++Q
Sbjct: 120 CGSLIGKGGSKIKEIREVTGASIQV-ASEMLPN---STERAVTISGT----SEAITQCIY 171
Query: 418 RLRANTFEREGALAAHPP---VLPYVP 441
+ E PP +PY P
Sbjct: 172 HICCVMLES-------PPKGATIPYRP 191
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 30/159 (18%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G++++ R E+ A+I I D P + ++ V G
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTVTGPTN 70
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I + E S+ + P G+ G R
Sbjct: 71 SIFKAFTLICKKFEEWCSQ------------------FHDVPGSGAGGGGGVSRP----- 107
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 108 PITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 146
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEG 99
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +SE
Sbjct: 112 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEA 165
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 408 ASSALSQVTLRL 419
AL+Q + +
Sbjct: 430 V--ALAQYLINM 439
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 55/389 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 263
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 264 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 310
Query: 166 IRTETRAQIRILKDEHLPL---------------CALSFDELLQVAGEPAVVRKALVQIA 210
I +T +I I + L L CA + +E+++ E A + +
Sbjct: 311 IEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQ 370
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV-GSYGNYSARRDEASAREFSLRLVCP 269
+ L + + L SS+ +S+P SY + + + + + L P
Sbjct: 371 AHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESET-----VHLFIP 425
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITA 326
A +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P A
Sbjct: 426 ALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQFKA 478
Query: 327 ALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
R+ + E+ + V + I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 479 QGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPR 537
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P D+ +V+ITG +S L+Q
Sbjct: 538 DQTPD--ENDQVVVKITGHF--YASQLAQ 562
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
+ +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 205 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 245
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 129/306 (42%), Gaps = 56/306 (18%)
Query: 30 PGDETEQRGIG-SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
P + +G G S + V + + + IGSIIGK G +KQ R E+ ++I IS+ E
Sbjct: 12 PAESRPAKGRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDG--STPE 69
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI--VAEDSLADDEFGELTL-ITVRM 145
RIV++ + +DA+ I ED L + T +T+R+
Sbjct: 70 RIVSVTGT-----------------KDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRL 112
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+VP Q G +IGKGG I+ IR + A + ++ E LP S + + ++G P +
Sbjct: 113 IVPGSQCGSIIGKGGAKIKEIREVSGASV-VVAGEFLP---GSSERAVTLSGTPEALETC 168
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVY-----LSAPLVGSYGNYSARRDEASAR 260
+ + + E P R H + + + Q G Y P G YG A + A
Sbjct: 169 IDLLCGVMIEFPPRG-HPMPYTPHKLQQQFGFYGPPQGFGYP--GPYGMPHAFPNGFMAG 225
Query: 261 EF--------------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
S + G +G +IG+ G I IRQ SGASIK+ S
Sbjct: 226 RGPYGGGRKGKGPPPPQPGPITSHTMTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDS 285
Query: 301 GAEGDD 306
GDD
Sbjct: 286 -ENGDD 290
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 22/184 (11%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
L+++ +IG +IGK G IKQ RQES A I + S G+ + + TK+
Sbjct: 29 LKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINI-SDGSTPERIVSVTGTKDAVVTAFAL 87
Query: 324 ITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
I L + + + K+ P +T R++VP +Q G +IG+GGA I E+R + AS+ ++
Sbjct: 88 IGQKLEDELKSNSKSNT---TPPVTLRLIVPGSQCGSIIGKGGAKIKEIREVSGASV-VV 143
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP---VLPYV 440
E +P E V ++G+ + + + + G + PP +PY
Sbjct: 144 AGEFLPG---SSERAVTLSGTPEALETCIDLLC-----------GVMIEFPPRGHPMPYT 189
Query: 441 PMSL 444
P L
Sbjct: 190 PHKL 193
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSSSEGT 100
D R L P + GSIIGKGG+ + +LRS+ K++I VP C ER++TI SS+
Sbjct: 46 DDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTI--SSDLP 99
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + E V ++ R DE I VRMLV Q GC+IGKGG
Sbjct: 100 TVLQVLNEVVPNLEENGSR----------HGSDE------IDVRMLVHQSQAGCIIGKGG 143
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
I+ +R +T A+I+I C S D L+ + G+P+ + ++ + + +P
Sbjct: 144 LKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPSTCIDCIRELIATIKTSP 196
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
LRL+ P+ G +IGKGG I ++R + ASI V G + ++ IS+ PT
Sbjct: 49 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD--CPGPERVLTISSD------LPT 100
Query: 324 ITAAL-RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ L + P E R D I R+LV +Q GC+IG+GG I E+R T A I+I
Sbjct: 101 VLQVLNEVVPNLEENGSRHGSDE-IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI 159
Query: 383 LTN 385
++
Sbjct: 160 YSH 162
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIV 91
++ Q +GS T + P G+IIGKGG ++++RS++ + I I E +PG ++RI+
Sbjct: 374 NQGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRII 433
Query: 92 TI 93
TI
Sbjct: 434 TI 435
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
+ ++ +P D G +IGKGG I+ IR+++ A I I DE LP S D ++ + G P+
Sbjct: 387 STQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI--DEPLP---GSNDRIITITGLPSQ 441
Query: 202 VRKALVQIASRLHEN 216
++ A + +HEN
Sbjct: 442 IQMAQYLLQQSVHEN 456
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
GN + + + S ++ P G +IGKGG I++IR +SGA I +D +D
Sbjct: 372 GNNQGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDR 431
Query: 308 IIFIS 312
II I+
Sbjct: 432 IITIT 436
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 183/431 (42%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+ GK G +K + +T+S + I + G E
Sbjct: 126 PGGTSQARQI---DFPLRVLVPTQFVGANSGKEGLTIKNITKQTQSRVDIHRKENSGAAE 182
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++
Sbjct: 183 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKIFAH 225
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 226 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 281
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 282 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 338
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 339 YHPFATHSGYFSSLYPHHQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLAR 398
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 399 FAGASIKI--APAEGPDVSKRMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 451
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 452 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 507
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 508 FFASQTAQRKI 518
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 176/385 (45%), Gaps = 55/385 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T S I I + G E+ +TI+S+ EG
Sbjct: 194 DIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPEGC- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + I+ +++L D +F E I +++L + +G +IGK G+
Sbjct: 253 ---------SKACTTIME----IMQKEAL-DTKFTEE--IPLKILAHNNFVGRLIGKEGR 296
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
++ I +T +I I + L L + + + V G +A ++ ++ E S
Sbjct: 297 NLKKIEQDTGTKITISPLQDLTL--YNPERTITVKGSIEACSRAEEEVMKKVREA-YESD 353
Query: 222 HLLLSSSSNI-----YQSSGVYLSA-----------PLVGSYGNYSARRDEASAREFSLR 265
++ SN+ + G++ S P G++G S+ + + ++
Sbjct: 354 MAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSNFPPSGAHGGCSSFGGQPESE--TVH 411
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC----IIFISTKEFFEDPS 321
L PA +G +IGK G IKQ+ +GASIK+ + AEG D +I + P
Sbjct: 412 LFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQRMVIIVGP------PE 463
Query: 322 PTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A +
Sbjct: 464 AQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV 523
Query: 381 RILTNENVPKVAYEDEEMVQITGSL 405
++ + P D+ +V+I+G
Sbjct: 524 -VVPRDQTPD--ENDQVIVKISGHF 545
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 93/173 (53%), Gaps = 17/173 (9%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I IS+ ERIVTI +SE +F+
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGASE--VIFK-- 73
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
F A+ + + I+A S+ + +T+R++ PA Q G +IGKGG I+ I
Sbjct: 74 -AFAMIAE----KFEEDILA--SMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEI 126
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
R T AQ+++ D L S + + ++G P + + + I + + E+P +
Sbjct: 127 RESTGAQVQVAGD----LLPDSTERAVTISGTPHAITQCVKHICTVMLESPPK 175
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I D P + ++ + G
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SDGSSP------ERIVTITGASE 69
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V+ KA IA + E+ +L+S N S V P+
Sbjct: 70 VIFKAFAMIAEKFEED-------ILASMIN----STVTSRPPV----------------- 101
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 102 --TLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQV 136
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + S G+ + + E
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SDGSSPERIVTITGASEVIFKAF 75
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++ P++Q G LIG+GG+ I E+R +T A ++
Sbjct: 76 AMIAEKFEEDILASMINSTVTSRPPVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQ 135
Query: 382 I 382
+
Sbjct: 136 V 136
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 181/419 (43%), Gaps = 62/419 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEG-T 100
D R L +G+IIG+ G ++Q+ T++ + + + G E+ +TIY + E T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N + E L + GE++L R+L + IG +IGKGG
Sbjct: 246 NACKKIMEVTQQEAYGLSK----------------GEISL---RILAHNNLIGRIIGKGG 286
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + ++ V G + KA I+++L +E
Sbjct: 287 TTIKKIMQDTDTKITVSSIND----INNFNLERIITVKGSIDNMSKAESMISNKLRQSYE 342
Query: 216 N------------PSRSQHLLLSSSSNIYQS--SGVYLSAPLVGSYGNYSARRDE---AS 258
N P ++S++ Y S G+Y S P Y +
Sbjct: 343 NDLQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPTQQGIPIGD 402
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+E + L P ++G +IG G I+ I + SGAS+K+ + E D + + ++
Sbjct: 403 TQETAF-LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVDQQNDRKVTI 459
Query: 319 DPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
SP + + Q EK E + D +T ILVPS Q+G +IG+GG + E++
Sbjct: 460 VGSPE--SQWKAQYLIFEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ 517
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA 432
T + I+ L+ + + ++E VQI G SA R+RA + GA A
Sbjct: 518 RVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA----QRRIRAMVLQSSGAPGA 571
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ + +G +IG+ G I+QI Q + A + V DS GA I +
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITI-------Y 238
Query: 318 EDPSPTITAALRLQPRCSEKTERES---GDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
+P A ++ E T++E+ I+ RIL + IG +IG+GG I ++
Sbjct: 239 GNPENCTNACKKIM----EVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQ 294
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
T I + + ++ + E ++ + GS+D S A S ++ +LR + A+A
Sbjct: 295 DTDTKITVSSINDINN--FNLERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQS 352
Query: 435 PVLPYV-PMSLDITDGSKYGNR 455
+ P + PM++ T G Y +R
Sbjct: 353 LMFPGLHPMAMMSTAGMGYSSR 374
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 11/133 (8%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D VYR + P+ K+GSIIG+ GE++KQ+ ET++ IRI + P +RIV I
Sbjct: 26 DNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGK------ 79
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLVPADQIGCVIGK 158
E+ +SPA DA+ RV R+ + D G +VR+LV + Q +IGK
Sbjct: 80 -EEPEAALSPAIDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGK 138
Query: 159 GGQVIQNIRTETR 171
G I++I R
Sbjct: 139 QGSTIKSILESRR 151
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 9/124 (7%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPT 323
RL+ P +G +IG+ G +IKQ+ E+ A I++ D I+ IS KE E SP
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 324 ITAALRLQPRCSEKTERE--------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
I A LR+ R S + E +G + R+LV S+Q LIG+ G+ I + +
Sbjct: 90 IDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQGSTIKSILES 149
Query: 376 TRAS 379
R +
Sbjct: 150 RRCA 153
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 27/34 (79%)
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
R++VP ++G +IG+ G++I+ + ETRA+IRIL
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRIL 63
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
R++VP A++G +IGR G +I +M TRA IRIL
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRIL 63
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 185/408 (45%), Gaps = 63/408 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +PG T Q+ D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GPPRQGSPGATTRQKP--QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSTACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
KA +I ++ E+ ++ + + + + G+ L+A +G + S+ +
Sbjct: 335 ETCAKAEEEIMKKIRES---YENDIAAMNLQAHLIPGLNLNA--LGLFPPSSSGIPPPAV 389
Query: 260 REF------------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 390 SVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--AP 447
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AEG D ++ I+ P A R+ + E+ + V + I VPS
Sbjct: 448 AEGPDAKLRMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYA 502
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>gi|341893795|gb|EGT49730.1| hypothetical protein CAEBREN_09981 [Caenorhabditis brenneri]
Length = 529
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 110/233 (47%), Gaps = 38/233 (16%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T+++++PA++ G VIGK G+ ++ +R + QI +++D L D+ LQV G PA
Sbjct: 120 TIQIMIPANKCGMVIGKAGETMRKLRNLSGCQIHLVQDSKL----ADSDKPLQVTGLPAQ 175
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
V++ A +L E+ +L ++ Y S GN ++R D
Sbjct: 176 VKR-----AEQLVED-------ILKTTPETYIS-------------GNIASRSDNTK--- 207
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFED 319
++ + P +G ++G G IIK++ QE+G I+ D+ A + I I T E
Sbjct: 208 -TIHVNVPREAVGAIMGTNGVIIKKLSQETGTKIQFMPDADPALLERSIAIIGTPIKIEI 266
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
I + + KT+ P+ + VPS + G +IGRGG +I ++
Sbjct: 267 AVGCIRQIVSMATSSQHKTK---DGPLTIFYLTVPSNKCGLVIGRGGEVIKQI 316
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 17/128 (13%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIR-ISETVPGCDERIVTIYSSSEGTNLFEDS-GE 108
P +G+I+G G I+K+L ET + I+ + + P ER + I + + +
Sbjct: 214 PREAVGAIMGTNGVIIKKLSQETGTKIQFMPDADPALLERSIAIIGTPIKIEIAVGCIRQ 273
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRT 168
VS A + + D G LT+ + VP+++ G VIG+GG+VI+ I
Sbjct: 274 IVSMATSSQHKTKD-------------GPLTIFY--LTVPSNKCGLVIGRGGEVIKQINV 318
Query: 169 ETRAQIRI 176
E+ A +
Sbjct: 319 ESGAHCEL 326
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 147/333 (44%), Gaps = 47/333 (14%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+G++IG+GGE + Q++S+T +++S G + R T+ +G+ + D +
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTL----QGSKMSVDRARAM--IN 135
Query: 115 DALFRVHDRIVAEDSLADD---EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+ + R +R + D G IT M +P + G VIGKGG+ I+NI+ +T
Sbjct: 136 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 195
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
++ ++++ + + L++ G+P V A + L SR H
Sbjct: 196 VKMVMIQENQE---SGGQPKPLRITGDPEKVENARRMVEEILQ---SREDH--------- 240
Query: 232 YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+ P GS+G +R ++ P ++G +IGKGG IK++ ES
Sbjct: 241 ---PPGHFGFP--GSFGMSGGQRSIG-------EVIVPRASVGMIIGKGGETIKRLAAES 288
Query: 292 GASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITT 349
GA I K D+ + C + T E I A + +K+ G +
Sbjct: 289 GAKIQFKPDNDQTAQERCAVIQGTAE-------QIAKATQFISELVKKSGAAGGAEMF-- 339
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ VPS + G +IG+GG I ++ + + A + +
Sbjct: 340 YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 372
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 59/391 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 264
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 265 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 311
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
I +T +I I L+D L + + + V G KA +I ++ E+
Sbjct: 312 IEQDTDTKITISPLQD----LTLYNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAA 367
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA---------REFSLRLV 267
+ HL+ + N + G++ S+ + +S ++ L
Sbjct: 368 MNLQAHLIPGLNLN---ALGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQQPESETVHLF 424
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTI 324
PA +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 425 IPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQF 477
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + T I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 478 KAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VV 536
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P DE +V+ITG +S L+Q
Sbjct: 537 PRDQTPD--ENDEVVVKITGHF--YASQLAQ 563
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
T + +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 204 TEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 246
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 32/204 (15%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
++DA T GS G + + D R L P + GSIIGKGG+ + +LRS+ K+
Sbjct: 37 EADAGTMTGSG----GPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA 92
Query: 76 NIRISETVPGCD--ERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
+I VP C ER++TI SS+ + + E V ++ R D
Sbjct: 93 SI----IVPDCPGPERVLTI--SSDLPTVLQVLNEVVPNLEENGSR----------HGSD 136
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E I VRMLV Q GC+IGKGG I+ +R +T A+I+I C S D L+
Sbjct: 137 E------IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLI 186
Query: 194 QVAGEPAVVRKALVQIASRLHENP 217
+ G+P + + ++ + + +P
Sbjct: 187 SICGKPNTCIECIRELIATIKTSP 210
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
LRL+ P+ G +IGKGG I ++R + ASI V G + ++ IS+ PT
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD--CPGPERVLTISSD------LPT 114
Query: 324 ITAAL-RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ L + P E R D I R+LV +Q GC+IG+GG I E+R T A I+I
Sbjct: 115 VLQVLNEVVPNLEENGSRHGSDE-IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI 173
Query: 383 LTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
++ + + ++ I G + + ++ ++ + +
Sbjct: 174 YSH----CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK 212
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T ++ +P D G +IGKGG I+ +R+++ A I I DE L + S D ++ + G P+
Sbjct: 393 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLPSQ 447
Query: 202 VRKALVQIASRLHEN 216
++ A + +HEN
Sbjct: 448 IQMAQYLLQQSVHEN 462
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 32/180 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GEIVK+ R E+ + I IS+ C ERIVTI ++
Sbjct: 21 RLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITGTT--------- 69
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT-------LITVRMLVPADQIGCVIGKG 159
DA+F+ + I + L ++ G L IT+R+++PA Q G +IGKG
Sbjct: 70 --------DAIFKAFNLICKK--LEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKG 119
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I+ IR T A + ++ E LP S + + V+G + + + I + E+P +
Sbjct: 120 GSKIKEIREITGASV-VVASEMLP---NSTERAVTVSGTSDAITQCIYHICCVMLESPPK 175
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
+A + ++RL+ +G +IGK G I+K+ R+ESGA I + I +T
Sbjct: 12 DAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDA 71
Query: 316 FFEDPSPTITAALRLQPRCSEKTERESGDPV---------ITTRILVPSAQIGCLIGRGG 366
F+ A L +K E E G P+ IT R+++P++Q G LIG+GG
Sbjct: 72 IFK--------AFNL---ICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGG 120
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+ I E+R T AS+ ++ +E +P E V ++G+ D + + +
Sbjct: 121 SKIKEIREITGASV-VVASEMLPN---STERAVTVSGTSDAITQCIYHI 165
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G++++ R E+ A+I I D P + ++ + G
Sbjct: 18 LTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINI-SDGSCP------ERIVTITGTTD 70
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E + PL G+ A R
Sbjct: 71 AIFKAFNLICKKLEEE----------------------VGGPLAGT----------AIPR 98
Query: 261 -EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+LRL+ PA G +IGKGG IK+IR+ +GAS+ V S
Sbjct: 99 PPITLRLIMPASQCGSLIGKGGSKIKEIREITGASVVVAS 138
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
+SG P + + VP+ IGC+IG+GG I+E+R + A IRI N E +
Sbjct: 263 QSGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRI---SNCEDRESSSERTIT 319
Query: 401 ITGSLDVASSALSQVTLRLR 420
ITG+ + S AL+Q + R
Sbjct: 320 ITGTAE--SVALAQYLINTR 337
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 146/333 (43%), Gaps = 47/333 (14%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+G++IG+GGE + Q++S+T +++S G + R T+ +G+ + D +
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTL----QGSKMSVDRARAM--IN 99
Query: 115 DALFRVHDRIVAEDSLADD---EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+ + R +R + D G IT M +P + G VIGKGG+ I+NI+ +T
Sbjct: 100 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 159
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
++ ++++ + + L++ G+P V A + L SR H
Sbjct: 160 VKMVMIQENQE---SGGQPKPLRITGDPEKVENARRMVEEILQ---SREDH--------- 204
Query: 232 YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
+ P GS+G +R ++ P ++G +IGKGG IK++ ES
Sbjct: 205 ---PPGHFGFP--GSFGISGGQRSIG-------EVIVPRASVGMIIGKGGETIKRLAAES 252
Query: 292 GASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITT 349
GA I K D + C + T E I A + +K+ G +
Sbjct: 253 GAKIQFKPDDDQTAQERCAVIQGTAE-------QIAKATQFISELVKKSGAAGGAEMF-- 303
Query: 350 RILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ VPS + G +IG+GG I ++ + + A + +
Sbjct: 304 YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 336
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 21/141 (14%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE 98
G + ++ + P +G IIGKGGE +K+L +E+ + I+ + ER I ++E
Sbjct: 219 GGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAVIQGTAE 278
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
+ +F+S +V + A E+ M VP+++ G VIGK
Sbjct: 279 ---QIAKATQFIS-----------ELVKKSGAAGG--AEM----FYMHVPSNKTGLVIGK 318
Query: 159 GGQVIQNIRTETRAQIRILKD 179
GG+ I+ I E+ A + + +D
Sbjct: 319 GGETIKQICAESGAHVELSRD 339
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 28/177 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSSSEGT 100
D R L P + GSIIGKGG+ + +LRS+ K++I TVP C ER++T+ SS+
Sbjct: 20 DEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----TVPDCPGPERMLTL--SSDLD 73
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + V ++ RV+ EL L RM++ Q GCVIGK G
Sbjct: 74 TICNIVTDVVPNLEENGGRVNGN-------------ELDL---RMMIHQSQAGCVIGKAG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
I+ +R +T A+I+I + + S D ++Q+ GEP+ ++ +I + + NP
Sbjct: 118 YKIKELREKTGARIKIFSN----VAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNP 170
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 28/215 (13%)
Query: 244 VGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
+GS S R DE +RL+ P+ G +IGKGG I ++R + ASI V
Sbjct: 9 MGSPQKRSRRGDE------EVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPD--CP 60
Query: 304 GDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
G + ++ +S+ D + P E R +G+ + R+++ +Q GC+IG
Sbjct: 61 GPERMLTLSS-----DLDTICNIVTDVVPNLEENGGRVNGN-ELDLRMMIHQSQAGCVIG 114
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYED-EEMVQITGSLDVASSALSQVTLRLRAN 422
+ G I E+R T A I+I +N VA + + ++QI G ++ ++ +++N
Sbjct: 115 KAGYKIKELREKTGARIKIFSN-----VAPQSTDRIIQIVGEPSKCVDSIREIITLIKSN 169
Query: 423 TFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDN 457
+ V PY P + D +YG N
Sbjct: 170 PIKGI--------VNPYDPHNYDDYYAEEYGGWGN 196
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 48/293 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 104 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 158
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 159 ATVKAVMEQSGAWVQLSQKPEGINL----QERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 214
Query: 220 SQHLLLS--------SSSNIYQS--------------------SGVYLSAPLVGSYGNYS 251
S L +S ++SN S SG+ A L G G +
Sbjct: 215 SSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAG-VGAFP 273
Query: 252 ARRDEASAREFSLRLV---CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
A S + + LV P +G ++GKGG + + ++ +GA I++ G
Sbjct: 274 AALPAFSGTDLAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 100 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 154
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 155 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 209
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
V + S+A D GE +++L+P+ G +IGKGGQ I ++ ET A I++ K +
Sbjct: 25 VPDISIASDRDGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--F 82
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
+ + + V G + IA ++ E P Q + NI Q
Sbjct: 83 YPGTTERVCLVQGTAEALNAVHSFIAEKVREIP---QAMTKPEVVNILQP---------- 129
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ D A +L+ P G +IGKGG +K + ++SGA +++
Sbjct: 130 ----QTTMNPDRAK----QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 174
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 96/185 (51%), Gaps = 20/185 (10%)
Query: 40 GSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIY 94
G++D Y + L P GS+IGKGG+ V QL+ ET +NI++S++ PG ER+V I
Sbjct: 40 GNDDNKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLIT 99
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRI-VAEDSLADDEFGELTLITVRMLVPADQIG 153
+ E G FV + +V D +A + + + V++++P G
Sbjct: 100 GTVES---LTAVGNFV------IEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAG 150
Query: 154 CVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
+IGKGG I+ +T ++++I K E + L + +L ++GE +KA+ + S+
Sbjct: 151 LIIGKGGATIKAFMEQTGSKLQISQKSEGVNLS----ERVLTISGEGDANKKAMNAVISK 206
Query: 213 LHENP 217
+ E+P
Sbjct: 207 VQEDP 211
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG----AEGDDCIIFISTKEF 316
++ L+++ P+ G VIGKGG + Q+++E+GA+IK+ S + ++ T E
Sbjct: 45 KYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVES 104
Query: 317 FEDPSPTITAALRLQPRCSEKTERESG---DPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+ +R P+ + KT ES + +I++P++ G +IG+GGA I
Sbjct: 105 LTAVGNFVIEKVRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKGGATIKAFM 164
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T + ++I ++ E ++ I+G D A++ V +++
Sbjct: 165 EQTGSKLQISQKSEGVNLS---ERVLTISGEGDANKKAMNAVISKVQ 208
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSSSEGT 100
D R L P + GSIIGKGG+ + +LRS+ K++I VP C ER++TI SS+
Sbjct: 81 DDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASI----IVPDCPGPERVLTI--SSDLP 134
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + E V ++ R DE I VRMLV Q GC+IGKGG
Sbjct: 135 TVLQVLNEVVPNLEENGSR----------HGSDE------IDVRMLVHQSQAGCIIGKGG 178
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
I+ +R +T A+I+I C S D L+ + G+P + + ++ + + +P
Sbjct: 179 LKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPTTCIECIRELIATIKTSP 231
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
LRL+ P+ G +IGKGG I ++R + ASI V G + ++ IS+ PT
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD--CPGPERVLTISSD------LPT 135
Query: 324 ITAAL-RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ L + P E R D I R+LV +Q GC+IG+GG I E+R T A I+I
Sbjct: 136 VLQVLNEVVPNLEENGSRHGSDE-IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI 194
Query: 383 LTN 385
++
Sbjct: 195 YSH 197
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T ++ +P D G +IGKGG I+ +R+++ A I I DE L + S D ++ + G P+
Sbjct: 409 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLPSQ 463
Query: 202 VRKALVQIASRLHEN 216
++ A + +HEN
Sbjct: 464 IQMAQYLLQQSVHEN 478
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 32/204 (15%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
++DA T GS G + + D R L P + GSIIGKGG+ + +LRS+ K+
Sbjct: 51 EADAGTMTGSG----GPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKA 106
Query: 76 NIRISETVPGCD--ERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD 133
+I VP C ER++TI SS+ + + E V ++ R D
Sbjct: 107 SI----IVPDCPGPERVLTI--SSDLPTVLQVLNEVVPNLEENGSR----------HGSD 150
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E I VRMLV Q GC+IGKGG I+ +R +T A+I+I C S D L+
Sbjct: 151 E------IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLI 200
Query: 194 QVAGEPAVVRKALVQIASRLHENP 217
+ G+P + + ++ + + +P
Sbjct: 201 SICGKPNTCIECIRELIATIKTSP 224
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 16/164 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSP 322
LRL+ P+ G +IGKGG I ++R + ASI V D G E ++ IS+ P
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCPGPER---VLTISSD------LP 127
Query: 323 TITAAL-RLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
T+ L + P E R D I R+LV +Q GC+IG+GG I E+R T A I+
Sbjct: 128 TVLQVLNEVVPNLEENGSRHGSDE-IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIK 186
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I ++ + + ++ I G + + ++ ++ + +
Sbjct: 187 IYSH----CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK 226
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T ++ +P D G +IGKGG I+ +R+++ A I I DE L + S D ++ + G P+
Sbjct: 366 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLPSQ 420
Query: 202 VRKALVQIASRLHEN 216
++ A + +HEN
Sbjct: 421 IQMAQYLLQQSVHEN 435
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 75/272 (27%)
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+R E+ + I ISE C ERI+T+ + +A+F+ I+ D
Sbjct: 1 MREESGARINISEG--NCPERIITLAGPT-----------------NAIFKAFAMII--D 39
Query: 129 SLADDEFGELT--------LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
L +D +T +T+R++VPA Q G +IGKGG I+ IR T AQ+++ D
Sbjct: 40 KLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD- 98
Query: 181 HLPLCALSFDELLQVAGEPAVVRKALVQIA------------------------------ 210
+ S + + +AG P + + + QI
Sbjct: 99 ---MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIF 155
Query: 211 -----SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
++LH+ + H ++ + + SG+ S+P V Y +ASA+ S
Sbjct: 156 AGGQLTKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHE 208
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 209 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 240
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
P +T R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 58 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 95
>gi|390335391|ref|XP_003724135.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 695
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 140/307 (45%), Gaps = 54/307 (17%)
Query: 6 NINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEI 65
N+ F + A G R P + + G G+E+ + P + +G IIG+ G+
Sbjct: 90 NLAMQNDNDFNTFGAALSGMPRAAPANSMGRDGHGTEE----FFVPNKMVGLIIGRQGQQ 145
Query: 66 VKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
+ L+SE+ NI+I+ +R VT+ + E V A+ + + ++
Sbjct: 146 ISSLQSESGCNIQIAPENGISGDRQVTLTGTPEA----------VMHAKSLILDIVNKAS 195
Query: 126 AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLC 185
++ + +TV ML+PA ++G VIGKGG+ I+ + + +A +R++ + P+
Sbjct: 196 QNEAEGN--------MTVDMLIPATKVGLVIGKGGETIKQL--QEQAGVRMVMIQEGPV- 244
Query: 186 ALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVG 245
A D+ L+++G+ + +A ++ S + EN + SS N Y G +
Sbjct: 245 ATGMDKPLRISGDSQKIEEAK-RLVSEVMENAKNNDR---SSGDNFYSRGGPH------- 293
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
+D ++ P +G VIG+GG +IK+I++++ A ++ +
Sbjct: 294 --------KD----------VIVPKHAVGMVIGRGGDMIKRIQEQTKARVQFKPGDRDAP 335
Query: 306 DCIIFIS 312
+ + I+
Sbjct: 336 ERVALIT 342
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 133/338 (39%), Gaps = 84/338 (24%)
Query: 103 FEDSGEFVSPAQDALFRVHD--------------RIVAEDSLADDEFGELTLITVRMLVP 148
EDS PA L +D R +S+ D G T VP
Sbjct: 77 LEDSNSDAEPATKNLAMQNDNDFNTFGAALSGMPRAAPANSMGRDGHG-----TEEFFVP 131
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
+G +IG+ GQ I ++++E+ I+I P +S D + + G P V A
Sbjct: 132 NKMVGLIIGRQGQQISSLQSESGCNIQIA-----PENGISGDRQVTLTGTPEAVMHAKSL 186
Query: 209 IASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVC 268
I +++ A ++EA ++ ++
Sbjct: 187 ILDIVNK------------------------------------ASQNEAEGN-MTVDMLI 209
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFISTKEFFEDPSPTITA 326
PA +G VIGKGG IKQ+++++G + + G A G D + IS S I
Sbjct: 210 PATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLRISGD------SQKIEE 263
Query: 327 ALRLQPRCSEK---TERESGDPVIT-----TRILVPSAQIGCLIGRGGAIISEMRSATRA 378
A RL E +R SGD + ++VP +G +IGRGG +I ++ T+A
Sbjct: 264 AKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVIGRGGDMIKRIQEQTKA 323
Query: 379 SIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++ + + P E + ITGS + S A S V
Sbjct: 324 RVQFKPGDRDAP------ERVALITGSAESVSMAESMV 355
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 17 SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
S+ N + R+ GD RG +D + P +G +IG+GG+++K+++ +TK+
Sbjct: 269 SEVMENAKNNDRSSGDNFYSRGGPHKDVI----VPKHAVGMVIGRGGDMIKRIQEQTKAR 324
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFE 104
++ ER+ I S+E ++ E
Sbjct: 325 VQFKPGDRDAPERVALITGSAESVSMAE 352
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 86 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 137
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 138 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 196
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 197 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 248
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 249 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 277
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 96 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 155
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 156 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 210
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 211 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 265
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 180/426 (42%), Gaps = 78/426 (18%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++ + ++++ + + + G E+ +TIY + E
Sbjct: 64 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCT 123
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ A ++ + + E + + GE+ L ++L + IG +IGK G
Sbjct: 124 M-------------ACKKILEVMQQEANSTNK--GEICL---KILAHNNLIGRIIGKSGN 165
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T +I + + D + + + + ++ V G + K QI+++L +EN
Sbjct: 166 TIKRIMQDTDTKITVSSIND----ISSFNLERIITVKGSIENMSKGESQISAKLRQSYEN 221
Query: 217 ------------PSRSQHLLLSSSSN----IYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
P ++S++ N +++G SA G+ G Y +
Sbjct: 222 DLQALAPQTIMFPGLHPMAMMSTAGNGMGFTGRTAGATASASGSGATGMYPGSNFPIEVQ 281
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA------EGDDCIIFISTK 314
E + L P +G +IG G I+ I + SGAS+K+ A + + + I T
Sbjct: 282 ETTY-LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTP 340
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAII 369
E A + Q EK E + D +T I VPSAQ+G +IG+GG +
Sbjct: 341 E----------AQWKAQYLIFEKMREEGFVSGTDDVRLTVEIFVPSAQVGRIIGKGGQNV 390
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
E++ T + I++ E+ ++E V I G SA ++ R
Sbjct: 391 RELQRVTGSIIKL--PEHTASAPVDEETTVHIIGPFFSVQSAQRRI----------RTMM 438
Query: 430 LAAHPP 435
LA +PP
Sbjct: 439 LATNPP 444
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 18/226 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--DDCIIFISTKEFFE 318
+F LR++ + +G +IG+ G I+ I Q+S A + V G + I E
Sbjct: 64 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCT 123
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
I ++ + + K E I +IL + IG +IG+ G I + T
Sbjct: 124 MACKKILEVMQQEANSTNKGE-------ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDT 176
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + ++ ++ E ++ + GS++ S SQ++ +LR + ALA + P
Sbjct: 177 KITVSSINDIS--SFNLERIITVKGSIENMSKGESQISAKLRQSYENDLQALAPQTIMFP 234
Query: 439 YV-PMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGGS 483
+ PM++ T G+ G GR + AT + G + G Y GS
Sbjct: 235 GLHPMAMMSTAGNGMG-----FTGR-TAGATASASGSGATGMYPGS 274
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++SAR S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFSARVGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFSARVGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S A
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLTVARGRGRGRGDWSV---GAPGGVQE 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGDNIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 118/302 (39%), Gaps = 60/302 (19%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT------- 128
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P + +A L QI R P H + +S I +
Sbjct: 129 -GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE------------------- 166
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIF 310
++ PA +G VIGKGG IKQ+++ +G + + G G D +
Sbjct: 167 -------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR 213
Query: 311 ISTKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGG 366
I+ F + + +R + + + R + + + VP +G +IGR G
Sbjct: 214 ITGDPFKVQQAREMVLEIIREKDQADFRGVRGDFSARVGGGSIEVSVPRFAVGIVIGRNG 273
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+I ++++ I+ ++ + E Q+ G D A + V L ER
Sbjct: 274 EMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTAQER 327
Query: 427 EG 428
+G
Sbjct: 328 DG 329
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 90/182 (49%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE K+ R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFVMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ + R E+ A+I I + + P + ++ + G
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA V I +L E+ + S N +A AS
Sbjct: 67 AIFKAFVMIIDKLEED--------------------------INSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 10/182 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G K+ R+ESGA I + S G + I
Sbjct: 14 LTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 VMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PM 442
PM
Sbjct: 185 PM 186
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 29/174 (16%)
Query: 52 LRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVS 111
L+++GSIIGK GE VK++R E+ + I ISE ERIVTI ++E
Sbjct: 5 LQEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITGATE------------- 49
Query: 112 PAQDALFRVHDRIVA---ED---SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A+FR I ED ++++ +T+R++ P Q G +IGKGG I+
Sbjct: 50 ----AIFRTFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKE 105
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
IR T AQ+++ D + S + + ++G P + + + I S + E+P +
Sbjct: 106 IRETTGAQVQVAGD----MLPDSTERAVTISGTPQAITQCVRHICSVMLESPPK 155
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 1/110 (0%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G +K+IR+ESGA I + S G+ + + E I
Sbjct: 8 VGSIIGKKGETVKKIREESGARINI-SEGSSPERIVTITGATEAIFRTFAMIAQKFEEDI 66
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + P +T R++ P +Q G LIG+GG+ I E+R T A +++
Sbjct: 67 NAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQV 116
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 37/148 (25%)
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
++G +IGK G+ ++ IR E+ A+I I + S + ++ + G + + I
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEGS-------SPERIVTITGATEAIFRTFAMI 58
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
A + E+ + + S+SN+ S P V +LRLV P
Sbjct: 59 AQKFEEDINAAM-----SNSNVT-------SKPPV------------------TLRLVFP 88
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 89 GSQCGSLIGKGGSKIKEIRETTGAQVQV 116
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 29 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 84
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 85 FEEWCSQFHD-IQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 143
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ E LP S + + ++G + + + I + E+P +
Sbjct: 144 SIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLESPPK 186
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
G GN ++ + ++RL+ +G +IGK G I+K+ R+ESGA I +
Sbjct: 3 GMDGNNKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPE 62
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD----------PVITTRILVP 354
+ T F+ + + CS+ + + G P IT R++VP
Sbjct: 63 RIVTVTGPTNSIFKA---FTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVP 119
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
++Q G LIG+GG+ I E+R T ASI++ +E +P E V I+G+ S A++Q
Sbjct: 120 ASQCGSLIGKGGSKIKEIREVTGASIQV-ASEMLPN---STERAVTISGT----SEAITQ 171
Query: 415 VTLRLRANTFEREGALAAHPP---VLPYVP 441
+ E PP +PY P
Sbjct: 172 CIYHICCVMLE-------SPPKGATIPYRP 194
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSE 98
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +SE
Sbjct: 113 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 167
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 146/337 (43%), Gaps = 47/337 (13%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S+T +++S G + R T+ +G+ + D +
Sbjct: 40 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTL----QGSKMSVDRARAM 95
Query: 111 SPAQDALFRVHDRIVAEDSLADD---EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ + R +R + D G IT M +P + G VIGKGG+ I+NI+
Sbjct: 96 --INEVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 153
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
+T ++ ++++ + + L++ G+P V A + L SR H
Sbjct: 154 EQTGVKMVMIQENQE---SGGQPKPLRITGDPEKVENARRMVEEILQ---SREDH----- 202
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
+ P GS+G +R ++ P ++G +IGKGG IK++
Sbjct: 203 -------PPGHFGFP--GSFGISGGQRSIG-------EVIVPRASVGMIIGKGGETIKRL 246
Query: 288 RQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP 345
ESGA I K D + C + T E I A + +K+ G
Sbjct: 247 AAESGAKIQFKPDDDQTAQERCAVIQGTAE-------QIAKATQFISELVKKSGAAGGAE 299
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + VPS + G +IG+GG I ++ + + A + +
Sbjct: 300 MF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 334
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 50/284 (17%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + + ++++ + I++S E PG +RI+ I S +
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIK-- 92
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E ++ + L ++H + AED +E I R++VP G +IGKGG
Sbjct: 93 -------EVINGLELILDKLHSELHAEDG---NEVEPRRRI--RLVVPNSSCGGIIGKGG 140
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++ E++A I+I ++ LS D L+ ++G +A+ I ++L E+ S
Sbjct: 141 ATIKSFIEESKAGIKISPLDNT-FYGLS-DRLVTLSGTFEEQMRAIDLILAKLTEDDHYS 198
Query: 221 QHLLLSSSSNIYQSSGVYLSA----------PLV-------------GSYGNYSARRDEA 257
Q++ + Y +G++ S P V GS G Y +DEA
Sbjct: 199 QNV-----HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKDEA 253
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S ++ + +IG V+G+GG I +I Q +GA IK+ G
Sbjct: 254 ST---TVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDRG 294
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFIS--TKEFF 317
+R + G VIGKGG I + + +SGA I++ S E D II IS KE
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQL-SRNQEFFPGTTDRIIMISGSIKEVI 95
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I L + + E E P R++VP++ G +IG+GGA I ++
Sbjct: 96 -NGLELILDKLHSELHAEDGNEVE---PRRRIRLVVPNSSCGGIIGKGGATIKSFIEESK 151
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
A I+I +N + +V ++G+ + A+ + +L
Sbjct: 152 AGIKISPLDNT--FYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 162/388 (41%), Gaps = 77/388 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ V G +R++++ S G
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSG------- 100
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGCVIGKGGQVI 163
+S A + + + + E + A G + +R+L+ +Q+G +IG+ G I
Sbjct: 101 ---ISKA----YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKI 153
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ I+ + ++ + + E LP S + +++V G PA + KA+ +I L ++ R
Sbjct: 154 KQIQDASGVRM-VAQKEMLPQ---STERIVEVQGSPAGIEKAVWEIGKCLIDDHERGYGT 209
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+L + + Q P VG + SA PAG +GG
Sbjct: 210 VLYNPAVRVQ--------PGVGP----GPAANGGSA---------PAGGMGG-------- 240
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
G S GA+ D S + + AA R P T E G
Sbjct: 241 --------GRSYNRTGHGADFSDSPPAFSRRSGSD-------AASRPPP----PTHTEDG 281
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMVQI 401
+ + T I +PS +GC+IGRGG+ ISE+R + A I I K ++D E M I
Sbjct: 282 EEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIA------KAPHDDTGERMFTI 335
Query: 402 TGSLDVASSALSQVTLRLRANTFEREGA 429
TGS AL + L A R A
Sbjct: 336 TGSASANEKALYLLYENLEAEKMRRSQA 363
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 23/171 (13%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVTI S+E
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTEAI------------ 67
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRT 168
A + ++ + + + G + +T+R++VPA Q G +IGKGG I+ IR
Sbjct: 68 -YKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIRE 126
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T AQI++ D LP S + + + G + + + I + + E+P +
Sbjct: 127 ATGAQIQVASDV-LP---QSTERAVTLTGTRDSITQCIFHICAVMVESPPK 173
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
A+ + S +LRL+ +G +IGK G I+K+ R+ESGA I + I
Sbjct: 3 AKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISG 62
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIIS 370
ST+ ++ S T + KT + G +T R++VP++Q G LIG+GG I
Sbjct: 63 STEAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
E+R AT A I++ ++ + E V +TG+ D +++Q + A E
Sbjct: 123 EIREATGAQIQVASD----VLPQSTERAVTLTGTRD----SITQCIFHICAVMVE 169
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 35/159 (22%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G++++ R E+ A+I I D P + ++ ++G
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTISGSTE 65
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +++ E + A +G G
Sbjct: 66 AIYKAFSLICTKVEE---------------FIEMQNGKTGATAIGKCG------------ 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+LRL+ PA G +IGKGG IK+IR+ +GA I+V S
Sbjct: 99 -MTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVAS 136
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 33 ETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIV 91
+T IG R + P + GS+IGKGG +K++R T + I++ S+ +P ER V
Sbjct: 88 KTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAV 147
Query: 92 TIYSSSEGTN--LFEDSGEFV-SPAQDAL--FRVHDRIVAEDSLADDEFGELTLITVRML 146
T+ + + +F V SP + +R ++ A LA + TL +
Sbjct: 148 TLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQMGAPVILAGGQ--AFTLASAGSA 205
Query: 147 VPADQIGCVIGKGG-----QVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEP 199
D +G ++ GG ++ A + ++ PL +F +L ++ G P
Sbjct: 206 AGCD-VGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNP 264
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
AL + N L + S + + GS N ++R +
Sbjct: 265 LAGLAALGLGSLGGPANSFNPAALAALAGSQLRSN----------GSGANINSR---SGG 311
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----DSSGAEGDDCIIFIS 312
+ + + P IG +IGKGG I +IRQ SGA I++ D G+ D I I+
Sbjct: 312 GQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITIT 368
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E+ A D + ITG+ D
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRT-ITITGNPD- 372
Query: 408 ASSALSQVTLRLR 420
S AL+Q + +R
Sbjct: 373 -SVALAQYLINMR 384
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T M VP D IGC+IGKGG I IR + A IRI E A S D + + G P
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITITGNPDS 373
Query: 202 VRKALVQIASRL 213
V A I R+
Sbjct: 374 VALAQYLINMRI 385
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 61/398 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG +
Sbjct: 199 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCS 258
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+ + L +H A+D+ DE + ++++ + +G +IGK G+
Sbjct: 259 ---------AACRMILDIMHQE--AKDTKTADE------VPLKIMAHNNFVGRLIGKEGR 301
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G +A V+I ++ E
Sbjct: 302 NLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSIEACCQAEVEIMKKVRE---A 354
Query: 220 SQHLLLSSSSNIYQSSGVYLSA----------------PLVG--SYGNYSARRDEASARE 261
++ + + + + G+ L A VG YG + A E
Sbjct: 355 YENDIAAMNQQTHLIPGLNLGALGLFPSSSNMPPPPPGNAVGGTPYGCFGAPEQE----- 409
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++ + PA +G +IGK G IKQ+ + +GASIK+ + + + I T P
Sbjct: 410 -TVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVIVTG----PPE 464
Query: 322 PTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A R+ + E+ + V + T I + +A G +IG+GG ++E+++ T A +
Sbjct: 465 AQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEV 524
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ E P D+ +V+I G +S L+Q +R
Sbjct: 525 -VVPREQTPD--ENDQVIVKINGHF--YASQLAQRKIR 557
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 146/338 (43%), Gaps = 47/338 (13%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P +G +IG+GGE + Q++S+T +++S G + R T+ +G+ + D
Sbjct: 92 VPDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTL----QGSKMSVDRARA 147
Query: 110 VSPAQDALFRVHDRIVAEDSLADD---EFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+ + + R +R + D G IT M +P + G VIGKGG+ I+NI
Sbjct: 148 M--INEVIARAGNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNI 205
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ +T ++ ++++ + + L++ G+P V A + L SR H
Sbjct: 206 QEQTGVKMVMIQENQE---SGGQPKPLRITGDPEKVENARRMVEEILQ---SREDH---- 255
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
+ P GS+G +R ++ P ++G +IGKGG IK+
Sbjct: 256 --------PPGHFGFP--GSFGIGGGQRSIG-------EVIVPRASVGMIIGKGGETIKR 298
Query: 287 IRQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD 344
+ ESGA I K D + C + T E I A + +K+ G
Sbjct: 299 LAAESGAKIQFKPDDDQTTQERCAVIQGTAE-------QIAKATQFISELVKKSGAAGGA 351
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + VPS + G +IG+GG I ++ + + A + +
Sbjct: 352 EMF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 387
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G + ++ + P +G IIGKGGE +K+L +E+ + I+ P D+ ++ E
Sbjct: 270 GGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK---PDDDQ------TTQER 320
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ + + E ++ A + ++E G + M VP+++ G VIGKG
Sbjct: 321 CAVIQGTAEQIAKA--------TQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKG 370
Query: 160 GQVIQNIRTETRAQIRILKD 179
G+ I+ I E+ A + + +D
Sbjct: 371 GETIKQICAESGAHVELSRD 390
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 23/171 (13%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVTI S+E
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTEAI------------ 67
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQVIQNIRT 168
A + ++ + + + G + +T+R++VPA Q G +IGKGG I+ IR
Sbjct: 68 -YKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIRE 126
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T AQI++ D + S + + + G + + + I + + E+P +
Sbjct: 127 ATGAQIQVASD----VLPQSTERAVTLTGTRDSITQCIFHICAVMVESPPK 173
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 5/165 (3%)
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
A+ + S +LRL+ +G +IGK G I+K+ R+ESGA I + I
Sbjct: 3 AKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISG 62
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIIS 370
ST+ ++ S T + KT + G +T R++VP++Q G LIG+GG I
Sbjct: 63 STEAIYKAFSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
E+R AT A I++ ++ + E V +TG+ D + + +
Sbjct: 123 EIREATGAQIQVASD----VLPQSTERAVTLTGTRDSITQCIFHI 163
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 35/159 (22%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G++++ R E+ A+I I D P + ++ ++G
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTISGSTE 65
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +++ E + A +G G
Sbjct: 66 AIYKAFSLICTKVEE---------------FIEMQNGKTGATAIGKCG------------ 98
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+LRL+ PA G +IGKGG IK+IR+ +GA I+V S
Sbjct: 99 -MTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVAS 136
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 33 ETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIV 91
+T IG R + P + GS+IGKGG +K++R T + I++ S+ +P ER V
Sbjct: 88 KTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAV 147
Query: 92 TIYSSSEGTN--LFEDSGEFV-SPAQDAL--FRVHDRIVAEDSLADDEFGELTLITVRML 146
T+ + + +F V SP + +R ++ A LA + TL +
Sbjct: 148 TLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQMGAPVILAGGQ--AFTLASAGSA 205
Query: 147 VPADQIGCVIGKGG-----QVIQNIRTETRAQIRILKDEHLPLCALSF--DELLQVAGEP 199
D +G ++ GG ++ A + ++ PL +F +L ++ G P
Sbjct: 206 AGCD-VGTMMVGGGPYNAPMLMVPPSPGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNP 264
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
AL + N L + S + + GS N ++R +
Sbjct: 265 LAGLAALGLGSLGGPANSFNPAALAALAGSQLRSN----------GSGANINSR---SGG 311
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----DSSGAEGDDCIIFIS 312
+ + + P IG +IGKGG I +IRQ SGA I++ D G+ D I I+
Sbjct: 312 GQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITIT 368
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E+ A D + ITG+ D
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRT-ITITGNPD- 372
Query: 408 ASSALSQVTLRL-----RANTFERE 427
S AL+Q + + RA+ + E
Sbjct: 373 -SVALAQYLINMSLEIQRASMLQSE 396
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T M VP D IGC+IGKGG I IR + A IRI E A S D + + G P
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITITGNPDS 373
Query: 202 VRKALVQ 208
V AL Q
Sbjct: 374 V--ALAQ 378
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 106/225 (47%), Gaps = 19/225 (8%)
Query: 194 QVAGEPAV-VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS- 251
++ G +V ++KA++ + S L + P + + S + P+ YS
Sbjct: 6 KITGSSSVAIKKAVIDVTSCLQDCPPYEKDEVDLSLGAGRRRRSGSSGEPMCSLLPTYSE 65
Query: 252 --------ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
+ +E S +F R++C G G +IG GG +++ ++ ++GASI
Sbjct: 66 NIATDGDHKKPNEQSQVQF--RMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITN 123
Query: 304 GDDCIIFISTKEFFEDP-SPTITAALRLQPRCSEK-TERESG-----DPVITTRILVPSA 356
DD ++ +S E E SP A L + R E ER + +T +L+PS
Sbjct: 124 SDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSN 183
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
++ CLIGRGG + SEM T A I+I+ + +A +++ +VQ+
Sbjct: 184 KVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 15 FQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
+ + AT+G K+ N + + +R +C G IIG GG +V+ L+++T
Sbjct: 63 YSENIATDGDHKKPNEQSQVQ----------FRMICSHGAAGRIIGTGGSVVRALQNQTG 112
Query: 75 SNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
++I + + D+R+VT+ + E+ SPAQ+AL V R + D
Sbjct: 113 ASIIFARPITNSDDRLVTVSA-------LENLESSHSPAQNALLLVFARSIEHDIERARS 165
Query: 135 FGELTLITV--RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
G + ITV +L+P++++ C+IG+GG+V + T A I+I++ + A D +
Sbjct: 166 LGLIEEITVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAV 225
Query: 193 LQV 195
+QV
Sbjct: 226 VQV 228
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ S+
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST--------------- 66
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT---------LITVRMLVPADQIGCVIGKGGQVI 163
+A+F+ I + +F ++ IT+R++VPA Q G +IGKGG I
Sbjct: 67 --NAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR T A I++ E LP S + + ++G + + + I + + E+P +
Sbjct: 125 KEIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICTVMLESPPK 176
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK 314
++ S ++RL+ +G +IGK G I+K+ R+ESGA I + + ST
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTN 67
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERESGD-----PVITTRILVPSAQIGCLIGRGGAII 369
F+ + + CS+ + SG P IT R++VP++Q G LIG+GG+ I
Sbjct: 68 AIFKA---FTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKI 124
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
E+R T ASI++ +E +P E V I+G+ + + + +
Sbjct: 125 KEIREVTGASIQV-ASEMLPN---STERAVTISGTGEAITQCIYHI 166
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 50/208 (24%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G++++ R E+ A+I I D P + ++ V G
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTVTGSTN 67
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I + E S+ Q + S G + P
Sbjct: 68 AIFKAFTLICKKFEEWCSQFQDI---------NSGGSGVPRP------------------ 100
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS---------------SGAEGD 305
+LRL+ PA G +IGKGG IK+IR+ +GASI+V S +G
Sbjct: 101 PITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTGEAIT 160
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPR 333
CI I T E P T R +P+
Sbjct: 161 QCIYHICTV-MLESPPKGATIPYRPKPQ 187
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +
Sbjct: 96 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGT 155
Query: 97 SE 98
E
Sbjct: 156 GE 157
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI ++ + + + + I+G+ D
Sbjct: 320 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDA 377
Query: 408 ASSALSQVTLRLRANT 423
+ A + +R+ T
Sbjct: 378 VALAQYLINMRISMET 393
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 17 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 68
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 69 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 127
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 128 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 179
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 180 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 208
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 27 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 86
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 87 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 141
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 142 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 196
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 197/467 (42%), Gaps = 84/467 (17%)
Query: 1 MAGQSNINYGKRTHFQSDAATNGGS--KRRNPGDET--EQRGIGSE------DTVYRYLC 50
++G NY + + D N S R GD + EQ GS D R L
Sbjct: 72 LSGHQFENYSFKISYIPDEEVNSLSPPHRVQRGDHSSREQGHSGSSSQTRQIDFPLRILV 131
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P + +G+IIGK G +K + +T+S + I + G E+ VTI+++ EGT
Sbjct: 132 PTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT--------- 182
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S A + + + + LA++ + +++L +G +IGK G+ ++ I E
Sbjct: 183 -SEACRMILEIMQKEAEDTKLAEE-------VPLKILAHNGLVGRLIGKEGRNLKKIEHE 234
Query: 170 TRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
T +I I L+D L + + + V G A ++I +L E + L ++
Sbjct: 235 TGTKITISSLQD----LSIYNPERTITVKGTIDACANAEMEIMKKLREA-FENDMLAVNQ 289
Query: 228 SSNIYQ----------SSGVYLSAPLVG--------------SYGNY-----------SA 252
+N+ S+G+ + P G S+ Y
Sbjct: 290 QANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSVPYHPFASHSGYFPNMYPHHHFGPF 349
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---II 309
+ + ++ L P +G +IGK G IKQ+ + +GASIK+ + AEG D ++
Sbjct: 350 PHHHSYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMV 407
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I+ P A R+ + E+ + V + I VPS+ G +IG+GG
Sbjct: 408 IITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 462
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++E+++ T A + I+ + P E +V+I G + +A ++
Sbjct: 463 VNELQNLTSAEV-IVPRDQTPD--ENAEVIVRIIGHFFASQTAQRKI 506
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 91/199 (45%), Gaps = 20/199 (10%)
Query: 239 LSAPLVGSYGNYSARRDEASAR-------EFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
LS P G++S+R S +F LR++ P +G +IGK G IK I +++
Sbjct: 95 LSPPHRVQRGDHSSREQGHSGSSSQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 154
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +E T+ P+
Sbjct: 155 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEAEDTKLAEEVPL-- 208
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G++D
Sbjct: 209 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIDAC 265
Query: 409 SSALSQVTLRLRANTFERE 427
++A ++ +LR FE +
Sbjct: 266 ANAEMEIMKKLR-EAFEND 283
>gi|324511113|gb|ADY44637.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 581
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 151/348 (43%), Gaps = 43/348 (12%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S++ +++S G + R T+ +GT + + +
Sbjct: 41 PDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTL----QGTKMAVERAK-- 94
Query: 111 SPAQDALFRVHDRIVAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S QD + R +R D G IT ML+P + G VIGKGG+ I+NI+ +
Sbjct: 95 SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQ 154
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++ ++++ + + L++ GEP V A R+ E
Sbjct: 155 AGVKMVMIQETQE---SGGQPKPLRIIGEP-----DKVDTARRMVE-------------- 192
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIR 288
+I QS + G + S+ ++ P ++G +IGKGG IK++
Sbjct: 193 DILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLA 252
Query: 289 QESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
ESGA I K D D C + T E I A + K+ SG +
Sbjct: 253 AESGAKIQFKPDEDQTTPDRCAVIQGTTE-------QIAKATQFISELVNKSGAGSGAEI 305
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYE 394
+ VP+ + G +IG+GG I ++ + + A + + + P +YE
Sbjct: 306 F--YMHVPANKTGLVIGKGGETIKQICAESGAHVEL--SREPPPNSYE 349
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTI 93
G GS ++ P K G +IGKGGE +KQ+ +E+ +++ +S E P E++ I
Sbjct: 298 GAGSGAEIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPNSYEKVFII 354
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P +G IIG+GGE + +L++++ S I++++ + G R T+ DS +
Sbjct: 102 VPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDL-GQPMRPCTLTG-------VPDSVQR 153
Query: 110 VSPAQDALFRVHDRIVAED--------------SLADDEFG----------ELTLITVRM 145
+ + R H + SL +G T M
Sbjct: 154 AKVLIEEIVREHMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAETETM 213
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+VPA++ G +IG+GG+ I I+T + A++++++++ P A + LL + G+ +++A
Sbjct: 214 MVPAERAGFLIGRGGETINMIQTRSGARLKMVQED--PHAA---ERLLYMMGDAEAIKRA 268
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
+A L E PS Q + P+ SY DE + R L+
Sbjct: 269 RELVADLLAEKPSAPQE-----------------APPMPTSY-------DENN-RHLRLK 303
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG---DDCIIFIST--KEFFEDP 320
+ P G VIG+GG I++I ++G I+ D + G +D I T ++ E
Sbjct: 304 IEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPNDARIATLTGNQDAIEAA 363
Query: 321 SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
I +R R D T I +P+ + G +IG+GG I ++ T +
Sbjct: 364 EQAIVGIIRDAERPDAGPPSRRADSRPTDTIAIPAERAGFIIGKGGETIRSIQDQTGVHL 423
Query: 381 RILTN 385
+ N
Sbjct: 424 ELDRN 428
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 23/298 (7%)
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
+V + L + +++TV M VP +G +IG+GG+ I ++ ++ ++I++ +D P
Sbjct: 79 VVWNEPLELKDVDASSIVTVEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDLGQP 138
Query: 184 L--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
+ C L+ G P V++A V I + E+ N + L A
Sbjct: 139 MRPCTLT--------GVPDSVQRAKVLIEEIVREHMQPFGPGAGGPGGNASGPTTASLMA 190
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---D 298
G+ + A+A + ++ PA G +IG+GG I I+ SGA +K+ D
Sbjct: 191 SAYGTAPDGDGADPNANAETET--MMVPAERAGFLIGRGGETINMIQTRSGARLKMVQED 248
Query: 299 SSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK-----TERESGDPVITTRILV 353
AE + + E + + L +P ++ T + + + +I V
Sbjct: 249 PHAAE--RLLYMMGDAEAIKRARELVADLLAEKPSAPQEAPPMPTSYDENNRHLRLKIEV 306
Query: 354 PSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
P G +IGRGG I + + T I+ + V + D + +TG+ D +A
Sbjct: 307 PGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGV-GLGPNDARIATLTGNQDAIEAA 363
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 115/273 (42%), Gaps = 57/273 (20%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
+ P + G +IG+GGE + +++ + + +++ + P ER++ + +E + + E
Sbjct: 214 MVPAERAGFLIGRGGETINMIQTRSGARLKMVQEDPHAAERLLYMMGDAEA---IKRARE 270
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGELTL--------ITVRMLVPADQIGCVIGKGG 160
V+ ++AE A E + + +++ VP G VIG+GG
Sbjct: 271 LVA-----------DLLAEKPSAPQEAPPMPTSYDENNRHLRLKIEVPGVAAGRVIGRGG 319
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+ I+ I +T C + FD+ V P R A + + +
Sbjct: 320 ETIRRIEADTG-------------CRIQFDQADGVGLGPNDARIATL----------TGN 356
Query: 221 QHLLLSSSSNIYQSSGVYLSA--PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
Q + ++ I G+ A P G +RR ++ + + PA G +IG
Sbjct: 357 QDAIEAAEQAIV---GIIRDAERPDAGP----PSRRADSRPTDT---IAIPAERAGFIIG 406
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
KGG I+ I+ ++G +++D + G++ I I
Sbjct: 407 KGGETIRSIQDQTGVHLELDRNSEAGNEKIFII 439
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 134/284 (47%), Gaps = 50/284 (17%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + + ++++ + I++S E PG +RI+ I S +
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIK-- 92
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V+ + L ++H + AED +E I R++VP G +IGKGG
Sbjct: 93 -------EVVNGLELILDKLHSELHAEDG---NEVEPRRRI--RLVVPNSSCGGIIGKGG 140
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++ E++A I+I ++ LS D L+ ++G +A+ I ++L E+ S
Sbjct: 141 ATIKSFIEESKAGIKISPLDNT-FYGLS-DRLVTLSGTFEEQMRAIDLILAKLTEDDHYS 198
Query: 221 QHLLLSSSSNIYQSSGVYLSA----------PLV-------------GSYGNYSARRDEA 257
Q++ + Y +G++ S P V GS G Y ++EA
Sbjct: 199 QNV-----HSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNHKEEA 253
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S ++ + +IG V+G+GG I +I Q +GA IK+ G
Sbjct: 254 ST---TVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRG 294
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFIS--TKEFF 317
+R + G VIGKGG I + + +SGA I++ S E D II IS KE
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQL-SRNQEFFPGTTDRIIMISGSIKEVV 95
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I L + + E E P R++VP++ G +IG+GGA I ++
Sbjct: 96 -NGLELILDKLHSELHAEDGNEVE---PRRRIRLVVPNSSCGGIIGKGGATIKSFIEESK 151
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
A I+I +N + +V ++G+ + A+ + +L
Sbjct: 152 AGIKISPLDNT--FYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD I + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD-IQGSGGVPRPP------ITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 135
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ D + S + + ++G + + + I + E+P +
Sbjct: 136 SIQVASD----MLPNSTERAVTISGTSEAITQCIYHICCVMLESPPK 178
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERE-SGD---PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + + SG P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ ++ + E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQVASD----MLPNSTERAVTISGT----SEAITQCIYHICCVMLES-------PPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + ++ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DSMDSKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S+ + Q SG
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDI---------QGSGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ S+ +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 408 ASSA--LSQVTLRLRANTFERE 427
S A L +++ L+ E +
Sbjct: 425 VSLAQYLISMSVELQKANLEAQ 446
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 154/367 (41%), Gaps = 83/367 (22%)
Query: 1 MAGQSNINYG--KRTH------------FQSDAATNGGSKRRNPGDET-----EQRGIGS 41
M+G SN+NY RT F+ NG +R DE+ ++R G
Sbjct: 222 MSGLSNVNYSVLHRTEMAIEGKNFFVLSFEIIGKMNG--MKRYYQDESLHYSRKRRRSGH 279
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN 101
E R L + G++IGKGGE +K+LRS+ +++ I ++ ER++ I ++ T
Sbjct: 280 EGPELRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDS--STPERVLNISCANVAT- 336
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
D + R+ +D + + E VRMLV Q G +IG+ G
Sbjct: 337 -------LTDCVSDLIPRL------DDGKSGPQEAE-----VRMLVHQSQAGAIIGRAGF 378
Query: 162 VIQNIRTETRAQIRILKDEHLPLCA-LSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ +R T A IR+ + CA LS + ++Q +G+ + A+ + E P +
Sbjct: 379 KIKELRDITGAGIRVYSE-----CAPLSTERVIQFSGDKEKIVNAIRHVKEICEETPIKG 433
Query: 221 QHLL----------------------LSSSSNIYQSSGVYLSAPLVGSYG---------- 248
L S+S +SSG++ S+P +
Sbjct: 434 VERLYDANNYDMSYALDYGGYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPM 493
Query: 249 ---NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
YS A ++++ P G +IGKGG I +IR+ESGA I VD + D
Sbjct: 494 QALGYSPMSLYAENLIATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSD 553
Query: 306 DCIIFIS 312
+ II IS
Sbjct: 554 ERIITIS 560
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDC 307
+YS +R + LRL+ + + G VIGKGG IK++R + AS+ + DSS E
Sbjct: 269 HYSRKRRRSGHEGPELRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPER--- 325
Query: 308 IIFISTKEFFEDPSPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
++ IS T+T + L PR + +SG R+LV +Q G +IGR G
Sbjct: 326 VLNISCANV-----ATLTDCVSDLIPRLDDG---KSGPQEAEVRMLVHQSQAGAIIGRAG 377
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
I E+R T A IR+ + E P E ++Q +G + +A+ V
Sbjct: 378 FKIKELRDITGAGIRVYS-ECAP---LSTERVIQFSGDKEKIVNAIRHV 422
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 28 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 79
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 80 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 138
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 139 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 190
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 191 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 219
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 38 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 97
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 98 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 152
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 153 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 207
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 85/167 (50%), Gaps = 10/167 (5%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ + ++F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 82
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + HD + IT+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 83 FEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 140
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ E LP S + + ++G + + + I + E+P +
Sbjct: 141 SIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLESPPK 183
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
N D+ S ++RL+ +G +IGK G I+K+ R+ESGA I +
Sbjct: 6 NKPVLNDDPSV-TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVT 64
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD---------PVITTRILVPSAQIG 359
+ T F+ + + CS+ + + G P IT R++VP++Q G
Sbjct: 65 VTGPTNSIFKA---FTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCG 121
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
LIG+GG+ I E+R T ASI++ +E +P E V I+G+ S A++Q +
Sbjct: 122 SLIGKGGSKIKEIREVTGASIQV-ASEMLPN---STERAVTISGT----SEAITQCIYHI 173
Query: 420 RANTFEREGALAAHPP---VLPYVP 441
E PP +PY P
Sbjct: 174 CCVMLES-------PPKGATIPYRP 191
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEG 99
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +SE
Sbjct: 111 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEA 165
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 408 ASSALSQVTLRLR 420
AL+Q + +R
Sbjct: 430 V--ALAQYLINMR 440
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 55/265 (20%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + + +
Sbjct: 83 PDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ----------QI 130
Query: 111 SPAQDALFRVHDRIVAEDSLADDEFGEL-TLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
A+ + + +R + + ++ T+ M+VP + G VIGK G+ I+N++ E
Sbjct: 131 DHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEE 190
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----LVQIASRLHENPSRSQHLLL 225
++ +++ + P D+ L+++GEP+ V KA LV I SR + P S H
Sbjct: 191 NGVKMVLIQQSNNP---TPEDKPLRISGEPSRVEKARQAVLVLINSR--DRPGGSIH--- 242
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
YG D ++++ PA G VIGKGG IK
Sbjct: 243 ---------------------YG-----YDGQETSQYAV----PAEKAGLVIGKGGESIK 272
Query: 286 QIRQESGASIKVDSSGAEGDDCIIF 310
+I + SGA +++ IF
Sbjct: 273 EICRVSGAHVEISKEPPPDPSIKIF 297
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 146/337 (43%), Gaps = 47/337 (13%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S+T +++S G + R T+ +G+ + D +
Sbjct: 40 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTL----QGSKMSVDRARAM 95
Query: 111 SPAQDALFRVHDRIVAEDSLADD---EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ + R +R + D G IT M +P + G VIGKGG+ I+NI+
Sbjct: 96 --INEVIARAGNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 153
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
+T ++ ++++ + + L++ G+P V A + L SR H
Sbjct: 154 EQTGVKMVMIQENQE---SGGQPKPLRITGDPEKVENARRMVEEILQ---SREDH----- 202
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
+ P GS+G +R ++ P ++G +IGKGG IK++
Sbjct: 203 -------PPGHFGFP--GSFGIGGGQRSIG-------EVIVPRASVGMIIGKGGETIKRL 246
Query: 288 RQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP 345
ESGA I K D + C + T E I A + +K+ G
Sbjct: 247 AAESGAKIQFKPDDDQTTQERCAVIQGTAE-------QIAKATQFISELVKKSGAAGGAE 299
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ + VPS + G +IG+GG I ++ + + A + +
Sbjct: 300 MF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 334
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G + ++ + P +G IIGKGGE +K+L +E+ + I+ P D+ ++ E
Sbjct: 217 GGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQFK---PDDDQ------TTQER 267
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ + + E ++ A + ++E G + M VP+++ G VIGKG
Sbjct: 268 CAVIQGTAEQIAKA--------TQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKG 317
Query: 160 GQVIQNIRTETRAQIRILKD 179
G+ I+ I E+ A + + +D
Sbjct: 318 GETIKQICAESGAHVELSRD 337
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 55/265 (20%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + + +
Sbjct: 105 PDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ----------QI 152
Query: 111 SPAQDALFRVHDRIVAEDSLADDEFGEL-TLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
A+ + + +R + + ++ T+ M+VP + G VIGK G+ I+N++ E
Sbjct: 153 DHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEE 212
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----LVQIASRLHENPSRSQHLLL 225
++ +++ + P D+ L+++GEP+ V KA LV I SR + P S H
Sbjct: 213 NGVKMVLIQQSNNP---TPEDKPLRISGEPSRVEKARQAVLVLINSR--DRPGGSIH--- 264
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
YG D ++++ PA G VIGKGG IK
Sbjct: 265 ---------------------YG-----YDGQETSQYAV----PAEKAGLVIGKGGESIK 294
Query: 286 QIRQESGASIKVDSSGAEGDDCIIF 310
+I + SGA +++ IF
Sbjct: 295 EICRVSGAHVEISKEPPPDPSIKIF 319
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 139/349 (39%), Gaps = 69/349 (19%)
Query: 19 AATNGGSKRRNPGDE-----TEQRGIGSEDTV--YRYLCPLRKIGSIIGKGGEIVKQLRS 71
A ++ S+ R P E T R + T +R LC + + +I+GKGGE + +++
Sbjct: 48 ADSDQQSQERIPQPEAPEPVTHHRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKE 107
Query: 72 ETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLA 131
+ + + +SE + G ER++T+ + E+V+ A F + R + ++
Sbjct: 108 MSSARVNVSENLKGIPERVITVRGPA----------EYVAKA----FGLITRAIMDEPFN 153
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
E I +++L P IG +IGK G + I + A ++ D+ LP S D
Sbjct: 154 QASTVESKQINLKLLFPHTIIGYIIGKRGARFREIEDNSAAALK-ASDQILP---ASTDR 209
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSS---------------- 235
+L + G + A +A + E+ + + +N Q S
Sbjct: 210 ILHITGVADAIHIATYYVAQTVIEHKQHLAKAVFYNPANCNQPSTPVGGNASRMAYGNGY 269
Query: 236 -------------GVYLSAPLVGSYGNY--------------SARRDEASAREFSLRLVC 268
Y+ P+ YG Y + + ++ + + +
Sbjct: 270 PPQVMQVPAPIMQSPYMGQPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYV 329
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEF 316
P +IG VIGKGG +K IR +G +KV D + + +ST F
Sbjct: 330 PQMHIGLVIGKGGKNLKDIRTITGCYVKVNDEVPGATERKLTLMSTSPF 378
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--DDCIIFISTKEFFEDPS 321
R++C ++GKGG I +I++ S A + V S +G + I E+
Sbjct: 82 FRMLCSINETAAIVGKGGETINRIKEMSSARVNV-SENLKGIPERVITVRGPAEYVAKAF 140
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
IT A+ +P ++ + ES I ++L P IG +IG+ GA E+ + A+++
Sbjct: 141 GLITRAIMDEP-FNQASTVESKQ--INLKLLFPHTIIGYIIGKRGARFREIEDNSAAALK 197
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 55/265 (20%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + + +
Sbjct: 105 PDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ----------QI 152
Query: 111 SPAQDALFRVHDRIVAEDSLADDEFGEL-TLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
A+ + + +R + + ++ T+ M+VP + G VIGK G+ I+N++ E
Sbjct: 153 DHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEE 212
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----LVQIASRLHENPSRSQHLLL 225
++ +++ + P D+ L+++GEP+ V KA LV I SR + P S H
Sbjct: 213 NGVKMVLIQQSNNP---TPEDKPLRISGEPSRVEKARQAVLVLINSR--DRPGGSIH--- 264
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
YG D ++++ PA G VIGKGG IK
Sbjct: 265 ---------------------YG-----YDGQETSQYAV----PAEKAGLVIGKGGESIK 294
Query: 286 QIRQESGASIKVDSSGAEGDDCIIF 310
+I + SGA +++ IF
Sbjct: 295 EICRVSGAHVEISKEPPPDPSIKIF 319
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFASR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 118/304 (38%), Gaps = 66/304 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEK------TERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + + R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRGDFASRAGGG---SIEVSVPRFAVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E Q+ G D A + + L
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHIINELILTAQ 325
Query: 425 EREG 428
ER+G
Sbjct: 326 ERDG 329
>gi|47223565|emb|CAF99174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 561
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 156/374 (41%), Gaps = 72/374 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +ED + P + +G IIGKGGE + +++ E+ I+I+ G +R
Sbjct: 73 GSMVHQRALATED----FKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRP 128
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
T+ S E + A+ L + ++ D G ++ ++L+PA+
Sbjct: 129 CTLTGSPEN----------IEQAKRLLNEIVEQCRYGPGFHCDMDGNGSI--QQILIPAN 176
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGK G+ I+ ++ T Q+ +++D+ LP A D+ L++ G+P V++A +
Sbjct: 177 KVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGA---DKPLRITGDPQKVQQARELVV 233
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE--FSLRLVC 268
+ + G++ R + ++ +L +V
Sbjct: 234 KLIRDK-----------------------------DQGDFRVGRADFGSKMGGSTLDVVV 264
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAAL 328
P +G +IG+ G +I++I+ ++G I+ DD I + P A
Sbjct: 265 PRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQ-----DDGISPDRVAQVMGQPDHCHHAVH 319
Query: 329 RLQPRCSEKTERES---------------GDP--VITTRILVPSAQIGCLIGRGGAIISE 371
+ ER+ G P + VP+ + G +IG+GG I
Sbjct: 320 IINELVQTAQERDGFGGVMGRRGRGDCNMGGPGGLQEVTYAVPADKCGLVIGKGGETIKN 379
Query: 372 MRSATRASIRILTN 385
++ +RA + + N
Sbjct: 380 IKEQSRAHVELQRN 393
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 121/287 (42%), Gaps = 37/287 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
R PG + G GS + + L P K+G +IGK GE +KQL+ T + + + P
Sbjct: 153 RYGPGFHCDMDGNGS---IQQILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDP-- 207
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR-VHDRIVAEDSLADDEFG-ELTLITVR 144
+ + ++ + V A++ + + + D+ + + +FG ++ T+
Sbjct: 208 ------LPTGADKPLRITGDPQKVQQARELVVKLIRDKDQGDFRVGRADFGSKMGGSTLD 261
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
++VP +G +IG+ G++I+ I+ + +I+ +D+ +S D + QV G+P
Sbjct: 262 VVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDD-----GISPDRVAQVMGQPDHCHH 316
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A+ I + R + + +G G +
Sbjct: 317 AVHIINELVQTAQERDGFGGVMGRRGRGDCN--------MGGPGGLQ-----------EV 357
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
PA G VIGKGG IK I+++S A +++ + D I I
Sbjct: 358 TYAVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPNIRI 404
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN-LFEDSG 107
+ P +G IIG+ GE++++++++ I+ + +R+ + + +
Sbjct: 263 VVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPDRVAQVMGQPDHCHHAVHIIN 322
Query: 108 EFVSPAQ--DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
E V AQ D V R D + G L V VPAD+ G VIGKGG+ I+N
Sbjct: 323 ELVQTAQERDGFGGVMGRRGRGDC---NMGGPGGLQEVTYAVPADKCGLVIGKGGETIKN 379
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I+ ++RA + + ++ P + + G P + KA I R+
Sbjct: 380 IKEQSRAHVELQRNP--PPNTDPNIRIFSIRGTPQQLEKARQLIDERI 425
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P +G +IGKGG I +I+ ESG I++ DS G C + S + I
Sbjct: 88 VPDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRPCTLTGSPE--------NIE 139
Query: 326 AALRLQPRCSEKTERESGDPVIT------TRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A RL E+ G +IL+P+ ++G +IG+ G I +++ T
Sbjct: 140 QAKRLLNEIVEQCRYGPGFHCDMDGNGSIQQILIPANKVGLVIGKKGETIKQLQERTGVQ 199
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ ++ ++ +P A ++ ++ITG A V +R
Sbjct: 200 MIMIQDDPLPTGA---DKPLRITGDPQKVQQARELVVKLIR 237
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 41/336 (12%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S++ +++S G + R T+ +GT + + +
Sbjct: 41 PDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTL----QGTKMAVERAK-- 94
Query: 111 SPAQDALFRVHDRIVAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S QD + R +R D G IT ML+P + G VIGKGG+ I+NI+ +
Sbjct: 95 SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQ 154
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++ ++++ + + L++ GEP V A R+ E
Sbjct: 155 AGVKMVMIQETQE---SGGQPKPLRIIGEP-----DKVDTARRMVE-------------- 192
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIR 288
+I QS + G + S+ ++ P ++G +IGKGG IK++
Sbjct: 193 DILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLA 252
Query: 289 QESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
ESGA I K D D C + T E I A + K+ SG +
Sbjct: 253 AESGAKIQFKPDEDQTTPDRCAVIQGTTE-------QIAKATQFISELVNKSGAGSGAEI 305
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ VP+ + G +IG+GG I ++ + + A + +
Sbjct: 306 F--YMHVPANKTGLVIGKGGETIKQICAESGAHVEL 339
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTI 93
G GS ++ P K G +IGKGGE +KQ+ +E+ +++ +S + P E++ I
Sbjct: 298 GAGSGAEIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPNSSEKVFII 354
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 126/273 (46%), Gaps = 32/273 (11%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
+ P + +G IIG+GGE + ++++E+ I+I+ G ER + + E
Sbjct: 184 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPES-------- 235
Query: 108 EFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ A+ L ++ DR +D T+ + L+PA ++G VIG+GG+ I+ ++
Sbjct: 236 --IEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI--LIPASKVGLVIGRGGETIKQLQ 291
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV---RKAL-----VQIASRLHENPSR 219
T ++ +++D LP A D+ L++ G+P V +K + A+++ P R
Sbjct: 292 ERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQVGKKPWHDGISPERAAQVMGPPDR 348
Query: 220 SQHL------LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
QH L+ ++ G+ ++ G++S A + PA
Sbjct: 349 CQHAAHIINELILTAQERDGFGGLAVARGRGRGRGDWSV---GAPGGVQEITYTVPADKC 405
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
G VIGKGG IK I Q+SGA +++ + D
Sbjct: 406 GLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 438
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 36/175 (20%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTI-- 93
I S T+ L P K+G +IG+GGE +KQL+ T + + + P G D+ +
Sbjct: 260 IDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGD 319
Query: 94 -YSSSEGTNLFED------SGEFVSPAQDALFRVHDRIVAEDSLADDE---FGELTLIT- 142
+ G + D + + + P H I+ E L E FG L +
Sbjct: 320 PFKVQVGKKPWHDGISPERAAQVMGPPDRCQHAAH--IINELILTAQERDGFGGLAVARG 377
Query: 143 ------------------VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
+ VPAD+ G VIGKGG+ I++I ++ A + + ++
Sbjct: 378 RGRGRGDWSVGAPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRN 432
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITA 326
P +G +IG+GG I +I+ ESG I++ +SSG C++ T E +I
Sbjct: 187 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL-TGTPE-------SIEQ 238
Query: 327 ALRLQPRCSEKTERESG-----DPVITTR-ILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A RL + ++ G D T + IL+P++++G +IGRGG I +++ T +
Sbjct: 239 AKRLLGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKM 298
Query: 381 RILTNENVPKVAYEDEEMVQITG 403
++ + +P A ++ ++ITG
Sbjct: 299 VMIQDGPLPTGA---DKPLRITG 318
>gi|348536136|ref|XP_003455553.1| PREDICTED: far upstream element-binding protein 3 [Oreochromis
niloticus]
Length = 556
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 143/360 (39%), Gaps = 72/360 (20%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P R +G IIG+GGE + +++ E+ I+I+ G ER ++ + E
Sbjct: 85 YKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAPEGGGLMERPCSLTGTPES-------- 136
Query: 108 EFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ A+ L ++ DR D GE ML+PA ++G VIG+GG I+ ++
Sbjct: 137 --IEQAKRLLAQIVDRCRNGPGFHGD--GEGGASVQEMLIPASKVGLVIGRGGDTIKQLQ 192
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
++ +++D +P A D+ L+++G+P V+ A + + E
Sbjct: 193 ERAGVKMMMIQDGPMPTGA---DKPLRISGDPYKVQAARELVLEVIREKD---------- 239
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR--EFSLRLVCPAGNIGGVIGKGGGIIK 285
G++ + R + AR SL + P +G VIG+ G +IK
Sbjct: 240 --------------------GDFRSGRSDFGARLGGTSLDVPVPRFAVGIVIGRNGEMIK 279
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERE---- 341
+I+ ++G I+ + DD I P A + ER+
Sbjct: 280 KIQNDAGVRIQFKA-----DDGISLERVAMVMGQPDRCQHAVHLINELIQTAQERDGFGS 334
Query: 342 ----------------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
S PV +P+ + G +IG+GG I + + A + + N
Sbjct: 335 ALRGGRVRGRGDWTMGSPGPVQEVTYTIPADKCGLVIGKGGETIKSINQQSGAHVELQRN 394
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 40/260 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
+V L P K+G +IG+GG+ +KQL+ + + + P G D+ +
Sbjct: 166 SVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRI-------- 217
Query: 101 NLFEDSGE--FVSPAQDALFRVHDRIVAEDSLADDEFG-ELTLITVRMLVPADQIGCVIG 157
SG+ V A++ + V + +FG L ++ + VP +G VIG
Sbjct: 218 -----SGDPYKVQAARELVLEVIREKDGDFRSGRSDFGARLGGTSLDVPVPRFAVGIVIG 272
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ G++I+ I+ + +I+ D+ +S + + V G+P + A+ I +
Sbjct: 273 RNGEMIKKIQNDAGVRIQFKADD-----GISLERVAMVMGQPDRCQHAVHLINELIQTAQ 327
Query: 218 SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVI 277
R S + +GS G + PA G VI
Sbjct: 328 ERD-----GFGSALRGGRVRGRGDWTMGSPGPVQ-----------EVTYTIPADKCGLVI 371
Query: 278 GKGGGIIKQIRQESGASIKV 297
GKGG IK I Q+SGA +++
Sbjct: 372 GKGGETIKSINQQSGAHVEL 391
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
Query: 29 NPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDE 88
+PG G + R L + G IIGKGG+ V LR +T +S+ VPG +
Sbjct: 13 SPGRSRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHD 72
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
R++TI S V A + ++VA + + T ++R+L+
Sbjct: 73 RVLTISGS-------------VDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLIS 119
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
+ +G +IG+GG I+ I+ + A++ KD + S + +++V G + +A+
Sbjct: 120 HNLMGTIIGRGGTRIKAIQDNSGARMVASKD----MLPQSTERVVEVHGSVEAIERAVDD 175
Query: 209 IASRLHENPSRSQHLLL---------SSSSNIYQSS-----GVYLSAPLVGSYGNYSARR 254
I L E+ R +L S SS Y + G S GS G+ S R+
Sbjct: 176 IGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSPS-RQ 234
Query: 255 DEASAREFSLR---LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--GDDCII 309
+S + +LR + P+ +G +IG+GG I +IR+ SG+ I + + + G+
Sbjct: 235 APSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHDETGERMFT 294
Query: 310 FISTKEFFE 318
+ T E E
Sbjct: 295 IVGTPEANE 303
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 50/220 (22%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE- 98
S T R L +G+IIG+GG +K ++ + + + S + +P ER+V ++ S E
Sbjct: 109 STHTSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEA 168
Query: 99 --------GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE------------- 137
G +L ED + LF H E S + + E
Sbjct: 169 IERAVDDIGKSLLED---WERGLGTVLF--HPGAGDERSGSSRRYSENRGSYGGSRQSNG 223
Query: 138 ------------------LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
L T + +P+D +GC+IG+GG I IR + ++I I K
Sbjct: 224 RPGSPGSPSRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKA 283
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
H + + + + G P KAL + ++L R
Sbjct: 284 PH----DETGERMFTIVGTPEANEKALFLLYNQLESEKER 319
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G+++AR S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFNARVGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 114/274 (41%), Gaps = 35/274 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFNARVGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GVSPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S A
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLAVARGRGRGRGDWSV---GAPGGVQE 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I Q+SGA +++
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 119/301 (39%), Gaps = 60/301 (19%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGA 367
+ F + + +R + + + R + + + + VP +G +IGR G
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRGDFNARVGGGSIEVSVPRFAVGIVIGRNGE 274
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+I ++++ I+ ++ V E Q+ G D A + V L ER+
Sbjct: 275 MIKKIQNDAGVRIQFKPDDGV-----SPERAAQVMGPPDRCQHA-AHVINELILTAQERD 328
Query: 428 G 428
G
Sbjct: 329 G 329
>gi|360043994|emb|CCD81540.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 527
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 71/284 (25%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
+GS P R +G +GKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 93 VGSRVVTTETAIPDRYVG--LGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ 148
Query: 99 GTN--------LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E +G+ +P A + G +T T+ M+VP
Sbjct: 149 QIDHAKQMIGDIIERAGKNGTPTTPAY---------------NSTGSIT--TIEMMVPGL 191
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----L 206
+ G VIGK G+ I+N++ E ++ +++ + P D+ L+++GEPA V KA L
Sbjct: 192 KAGLVIGKNGETIKNLQEENGVKMVLIQQSNNP---TPEDKPLRISGEPARVEKARQAVL 248
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
V I SR + P S H YG D ++++
Sbjct: 249 VLINSR--DRPGGSMH------------------------YG-----YDGQETSQYAV-- 275
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
PA G VIGKGG IK+I + SGA +++ IF
Sbjct: 276 --PAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIF 317
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 33/309 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 16 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 75
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 76 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 133
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 134 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 187
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL 243
C S D ++ + G+P V + + I + E+P + + N Y +
Sbjct: 188 CCPQSTDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQ--PYDPNFYDETY------- 238
Query: 244 VGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
YG ++ D+ R + G +IGKGG IKQIR ESGASIK+D
Sbjct: 239 --DYGGFTMMFDDRRGRPVGFPMRGREDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 296
Query: 304 GDDCIIFIS 312
+D II I+
Sbjct: 297 SEDRIITIT 305
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
+++G + P + +R + LR++ + N G VIGKGG IK +R +
Sbjct: 18 ETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYN 77
Query: 293 ASIKV-DSSGAEGDDCI-------------IFISTKEFFEDPSPTITAALRLQP---RCS 335
AS+ V DSSG E I I + +E + PSPT T+ L L+ C
Sbjct: 78 ASVSVPDSSGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECL 137
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
+ D R+L+ + G +IG GA I E+R T+ +I++
Sbjct: 138 NYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLF 185
>gi|366996763|ref|XP_003678144.1| hypothetical protein NCAS_0I01320 [Naumovozyma castellii CBS 4309]
gi|342304015|emb|CCC71800.1| hypothetical protein NCAS_0I01320 [Naumovozyma castellii CBS 4309]
Length = 364
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 34/264 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT-NLFE 104
+ L L + +IIG G +++L+S NI ISE VPGC +RI+T + G N +
Sbjct: 52 LKLLLSLAESAAIIGLKGARIQELKSTNHVNINISEKVPGCSDRILTCKGTLSGVANTIK 111
Query: 105 D-----SGEFVSPA-QDALFRVHDRIVAEDSLADDEFGELTLI----TVRMLVPADQIGC 154
D + E +PA + + F+ + +AE +L+D F L + +VR+++ +I
Sbjct: 112 DITVVLNKEITTPADKPSTFQFLNSKMAEPTLSD--FQTLETLDHVRSVRLILSNVKIST 169
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
+IGK + I + ++ ++ LP S + +L++ +P ++KA++ I +
Sbjct: 170 IIGKQAATFKKICHDNDVRMVATRN-FLP---DSRERILEIQSDPEHIKKAVLDILEIIT 225
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
+N + + L + IY P VG N S S +++ ++ P +G
Sbjct: 226 DNSNTALEL----NERIY--------TPHVGRAPNAS-----HSNQQYQAVVMVPEYLVG 268
Query: 275 GVIGKGGGIIKQIRQESGASIKVD 298
++G GG I +R+ + S+K++
Sbjct: 269 AMMGHGGSRIANLRKFTKTSVKIE 292
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 47/301 (15%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++T+++L+ + +IG G IQ +++ I I E +P C+ D +L G
Sbjct: 49 IVTLKLLLSLAESAAIIGLKGARIQELKSTNHVNINI--SEKVPGCS---DRILTCKGTL 103
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+ V + I L++ + + + +Q ++ P + + E
Sbjct: 104 SGVANTIKDITVVLNKEITTP-----ADKPSTFQFLNSKMAEPTLSDFQTL-----ETLD 153
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGAS---------------IKVDSSGAEG 304
S+RL+ I +IGK K+I ++ +++ S
Sbjct: 154 HVRSVRLILSNVKISTIIGKQAATFKKICHDNDVRMVATRNFLPDSRERILEIQSDPEHI 213
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQ-----PRCSEKTERESGDPVITTRILVPSAQIG 359
++ I E D S T AL L P + ++VP +G
Sbjct: 214 KKAVLDIL--EIITDNSNT---ALELNERIYTPHVGRAPNASHSNQQYQAVVMVPEYLVG 268
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++G GG+ I+ +R T+ S++I NE EDE + T +V + S T+ +
Sbjct: 269 AMMGHGGSRIANLRKFTKTSVKIEKNE-------EDETKRKFTILGNVEKNVKSAETMMM 321
Query: 420 R 420
R
Sbjct: 322 R 322
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 36/176 (20%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ S+
Sbjct: 26 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGST--------------- 68
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT---------LITVRMLVPADQIGCVIGKGGQVI 163
+A+F+ I + +EF ++ IT+R++VPA Q G +IGKGG I
Sbjct: 69 --NAIFKAFTLICKKF----EEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKI 122
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR T A I++ E LP S + + ++G + + + I + + E+P +
Sbjct: 123 KEIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICTVMLESPPK 174
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + ST F+
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTNAIFK--- 73
Query: 322 PTITAALRLQPRCSEKTERESGD-----PVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
A + + E + SG P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 74 ----AFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVT 129
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGS 404
ASI++ +E +P E V I+G+
Sbjct: 130 GASIQV-ASEMLPN---STERAVTISGT 153
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 91/222 (40%), Gaps = 62/222 (27%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G++++ R E+ A+I I D P + ++ V G
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTVTGSTN 69
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I + E +Q + S G+ R
Sbjct: 70 AIFKAFTLICKKFEE----------------FQD---------INSGGSGVPRPP----- 99
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS---------------SGAEGD 305
+LRL+ PA G +IGKGG IK+IR+ +GASI+V S +G
Sbjct: 100 -ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTGEAIT 158
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVI 347
CI I T E P T R +P+ G PVI
Sbjct: 159 QCIYHICTV-MLESPPKGATIPYRPKPQV--------GGPVI 191
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +
Sbjct: 94 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGT 153
Query: 97 SE 98
E
Sbjct: 154 GE 155
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 122/258 (47%), Gaps = 37/258 (14%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGKGG V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNV------------SGPL-----DAV 176
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F + ++ +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 177 SKAFGLIVRR--INDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGA 234
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + +L V+G + A I + L E ++ L ++S+ Y
Sbjct: 235 RLNASEG----MLPGSTERVLSVSGVADAIHIATYYIGNILIE---ANERLPSYNNSSYY 287
Query: 233 QSSGVYLSAPLVGS-----YGNYSARRDEASAREF-SLRLVCPAGNIGGVIGKGGGIIKQ 286
+ S P GS Y N ++ + ++ P +G +IGKGG I +
Sbjct: 288 RPSSNSRRPPPNGSSYVPGYSNTYPGSSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINE 347
Query: 287 IRQESGASIKVDSSGAEG 304
IR S ++IK+ GA G
Sbjct: 348 IRHMSASNIKIMEPGAVG 365
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 127/334 (38%), Gaps = 94/334 (28%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGKGG + IR ++ A R++ E +P + + +L V+G
Sbjct: 120 IHMRCLIVTQDASIIIGKGGSHVNEIREKSSA--RVMVSESIPG---NPERILNVSGPLD 174
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I R+++ P P V +R
Sbjct: 175 AVSKAFGLIVRRINDEP---------------------FDKPSV------------PGSR 201
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-----------DCI- 308
+++ + P +G VIGKGG IK+I+ SGA + G D I
Sbjct: 202 AVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIH 261
Query: 309 --------IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVI------------- 347
I I E P+ + +P + + +G +
Sbjct: 262 IATYYIGNILIEANERL----PSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSHG 317
Query: 348 ------TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL--------TNENVPKVAY 393
T +I +P+ +GC+IG+GG+ I+E+R + ++I+I+ N
Sbjct: 318 PPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGG 377
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
E E +V ITG A Q+ ++L + E+E
Sbjct: 378 EGERLVVITG-----QPANIQMAVQLLYHRLEQE 406
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 199 GSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 258
Query: 99 ---------GTNLFEDSGEFVSPAQDALFRVHDRIVA------------EDSLADDEFG- 136
G L E + S + +R ++ G
Sbjct: 259 AIHIATYYIGNILIEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSHGP 318
Query: 137 ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL-------PLCALSF 189
L T ++ +P D +GC+IGKGG I IR + + I+I++ + P A
Sbjct: 319 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAVGVGMNGAPAPAGGE 378
Query: 190 DE-LLQVAGEPAVVRKALVQIASRLHE 215
E L+ + G+PA ++ A+ + RL +
Sbjct: 379 GERLVVITGQPANIQMAVQLLYHRLEQ 405
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
A A +R + + +IGKGG + +IR++S A + V S + I+ +S
Sbjct: 115 APAANIHMRCLIVTQDASIIIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVS---- 170
Query: 317 FEDPSPTITAALRLQPR--CSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAIISEM 372
P ++ A L R E ++ S G +T + ++P++++G +IG+GGA I E+
Sbjct: 171 --GPLDAVSKAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEI 228
Query: 373 RSATRASI 380
+ A+ A +
Sbjct: 229 QDASGARL 236
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 117/240 (48%), Gaps = 30/240 (12%)
Query: 6 NINYGKRTHFQSDAATNGGSKRR---NPGDE---TEQRGIGSEDTVY-RYLCPLRKIGSI 58
N++ ++TH +D N S++R P +E T++ G E + + L P GSI
Sbjct: 23 NLHSLQQTHMDAD---NPDSRKRPLETPAEEAGCTKRTNTGEEGEYFLKVLIPSYAAGSI 79
Query: 59 IGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTN-----LFEDSGEFV 110
IGKGG+ + QL+ ET + I++S++ PG ER+ I + E N + E E
Sbjct: 80 IGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMP 139
Query: 111 SPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
AQ + + ++ D + +++VP G +IGKGG ++ + ++
Sbjct: 140 QSAQKP--EPVSILQPQTTVNPDRVKQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQS 192
Query: 171 RAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
A +++ K E + L + ++ ++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 193 GAWVQLSQKPEGINLQ----ERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 248
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGD 305
+ R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G
Sbjct: 54 TKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 113
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSA 356
C+I T E I +R P+ ++K E S D V +++VP++
Sbjct: 114 VCLIQ-GTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNS 172
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 173 TAGLIIGKGGATVKAVMEQSGAWVQL 198
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 170/397 (42%), Gaps = 60/397 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSS 96
GS DT + L P +G+IIGKGG V+Q+ S R+ PG D ++ TIY +
Sbjct: 176 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 234
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E A R+ + + E+ D+E + +++L IG +I
Sbjct: 235 PEACGA-------------AAIRILEIVRKEEK--DNE------LPLKVLAHNALIGRLI 273
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE- 215
G+ G+ +++++ +T +I I L + D + + GE + +A QI +L +
Sbjct: 274 GRDGRNLKHVQDKTGTRIAI--SSMHELSPYNMDRTISIHGEVKGISEAEQQITEKLRQF 331
Query: 216 ---NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR-EFSLRLVCPAG 271
+ SQ L ++ L +P N S + + +S + ++ L+ P+G
Sbjct: 332 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVSYQGNSSSNNTQETVTLLIPSG 391
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC-------IIFISTKEFFEDPSPTI 324
+G +IG G I+ I + +GASI++ + E D + + E I
Sbjct: 392 AVGAIIGSRGTHIRNISRIAGASIRIHALEGENADADRDAKARVTIVGVPESQWKAQFCI 451
Query: 325 TAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL- 383
L+ + + R +TT+I +P +G +IG+GG + E++ T + + I
Sbjct: 452 FDKLKQEGWFGNEEGR------LTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTIPR 505
Query: 384 -----TNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
T+E +P V ITG+ SA ++
Sbjct: 506 QGELNTSEEIP---------VSITGTFFSNQSAQRKI 533
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--GDDCIIFISTKEFFEDPS 321
L+++ PA +G +IGKGG ++QI Q + +VD E G D + I + P
Sbjct: 182 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI-----YGAPE 236
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
AA+R+ E +E D + ++L +A IG LIGR G + ++ T I
Sbjct: 237 ACGAAAIRIL----EIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIA 292
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + Y + + I G + S A Q+T +LR FE + A + + P
Sbjct: 293 ISSMHELS--PYNMDRTISIHGEVKGISEAEQQITEKLR--QFETDMAAMSQQSLYP 345
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 88 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERP 143
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 144 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEI--LIPAS 191
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ GEP V++A +
Sbjct: 192 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGEPFKVQQAREMVL 248
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 249 EIIREKD----------------------QADFRGVRSDFSSRMGGG-----SIEVSVPR 281
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 282 FAVGIVIGRNGEMIKKIQNDAGVRIQ 307
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 66/304 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I D +P C L+
Sbjct: 96 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLT-------- 147
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 148 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDVDGNSTIQE-------------------- 185
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 186 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRI 233
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ + F + + +R + + S+ + R G + + VP +G +IGR
Sbjct: 234 TGEPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---SIEVSVPRFAVGIVIGR 290
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E + Q+ G D A + + L
Sbjct: 291 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERVAQVMGLPDRCQHA-AHIINELILTAQ 344
Query: 425 EREG 428
ER+G
Sbjct: 345 ERDG 348
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 184/406 (45%), Gaps = 59/406 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +PG + Q+ + R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GPPRQGSPGAASRQKP--QSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSSACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHEN-------PSRSQHLLLSSSSN---IYQSSGVYLSAPLVG---- 245
KA +I ++ E+ + HL+ + N ++ S + P VG
Sbjct: 335 ETCAKAEEEIMKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPSVGVASA 394
Query: 246 ----SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSS 300
SY + + + + + L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 395 ASASSYPPFGQQPESET-----VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAE 449
Query: 301 GAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIG 359
G E ++ I+ P A R+ + E+ + V + I VPS G
Sbjct: 450 GPEAKLRMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAG 504
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
+IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 505 RVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++ AR S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFGARVGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFGARVGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S A
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLAVARGRGRGRGDWSV---GAPGGVQE 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 118/301 (39%), Gaps = 60/301 (19%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGA 367
+ F + + +R + + + R + + + VP +G +IGR G
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRGDFGARVGGGSIEVSVPRFAVGIVIGRNGE 274
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+I ++++ I+ ++ + E Q+ G D A + V L ER+
Sbjct: 275 MIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTAQERD 328
Query: 428 G 428
G
Sbjct: 329 G 329
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 168/384 (43%), Gaps = 43/384 (11%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
+ R L R+ G +IG+ G+ V +R + + +S+ VPG ER++T+ G +
Sbjct: 144 IMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTGQISG--VAR 201
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
G D + + DS + + +T+R+L+ + Q+G VIGK G I+
Sbjct: 202 AFGLICQTIMD-----NSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIK 256
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
+I+ + ++ K+ L S + L++++G P V KA+ +IA L E+ +++ +
Sbjct: 257 SIQQTSGTRMAASKE----LLPQSTERLVEISGRPEQVEKAVAEIAKALVEDEAKAVGTI 312
Query: 225 LSSSSNIY-QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+N+ + SG+ P++ S + +A R A++ G G++
Sbjct: 313 AFHPANLNPELSGLQSIPPIMRSSSSGTASRAPAASD----------GRAPGMMSMQQPH 362
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP------------SPTITAALRLQ 331
+ A + ++ T + P P T R +
Sbjct: 363 QQPQHMYPAAYAQHAQPAPAPAAAPLYGYTNDHAPPPRRYVPPQGYRANDPRNTPQDRYR 422
Query: 332 PRCSEKTERESGDPVITTR-ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
S + + DP + T+ I +PS +GC+IG+GG I+++R ++ + I I K
Sbjct: 423 ANASIASAAHAPDPNLRTQNISIPSDMVGCIIGKGGQKINDIRKSSGSKISIA------K 476
Query: 391 VAYED--EEMVQITGSLDVASSAL 412
A+++ E M ITG+ +AL
Sbjct: 477 TAHDETGERMFTITGTAQNNETAL 500
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 34/189 (17%)
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E V P +DA + R A E L + R LV + + G VIG+ G+ +
Sbjct: 109 EKDSPAVQPKEDAPPQAPIRSQAASPPGQAEAPTLIM---RALVSSREAGIVIGRQGKNV 165
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+IR +AQ++ + +P + + +L V G+ + V +A I + +N
Sbjct: 166 ADIRE--KAQVKAGVSKLVPGVS---ERVLTVTGQISGVARAFGLICQTIMDN------- 213
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
SSG+ +P Y+ S +LRL+ + +GGVIGK G
Sbjct: 214 ----------SSGIPNDSP-----STYTG----LSGSTLTLRLLISSAQMGGVIGKAGTK 254
Query: 284 IKQIRQESG 292
IK I+Q SG
Sbjct: 255 IKSIQQTSG 263
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++ AR S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFGARVGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 119/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFGARVGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S A
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLAVARGRGRGRGDWSV---GAPGGVQE 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 118/301 (39%), Gaps = 60/301 (19%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGA 367
+ F + + +R + + + R + + + VP +G +IGR G
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRGDFGARVGGGSIEVSVPRFAVGIVIGRNGE 274
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+I ++++ I+ ++ + E Q+ G D A + V L ER+
Sbjct: 275 MIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTAQERD 328
Query: 428 G 428
G
Sbjct: 329 G 329
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 72/376 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFTSR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G VIG+ G +IK+I+ ++G I+ DD I + P AA +
Sbjct: 263 FVVGIVIGRNGEMIKKIQNDAGVRIQFKP-----DDGISPERAAQVMGPPDRCQHAARII 317
Query: 331 QPRCSEKTERESGDPVITTR---------------------ILVPSAQIGCLIGRGGAII 369
ERE + TR VP+ + G +IG+GG I
Sbjct: 318 NELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENI 377
Query: 370 SEMRSATRASIRILTN 385
+ + A + + N
Sbjct: 378 KSINQQSGAHVELQRN 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHNDMDG---NSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR V D + G + +
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG----VRSDFTSRAGGGSIEVSVP 261
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R +V G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 262 RFVV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E +Q + + + G S VG+ G
Sbjct: 312 HA----ARIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 66/303 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDMDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGGG---SIEVSVPRFVVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E Q+ G D A +++ L
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-ARIINELILTAQ 325
Query: 425 ERE 427
ERE
Sbjct: 326 ERE 328
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 159/388 (40%), Gaps = 78/388 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ V G +R++++ S G
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSG------- 100
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGCVIGKGGQVI 163
+S A + + + + E + A G + +R+L+ +Q+G +IG+ G I
Sbjct: 101 ---ISKA----YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKI 153
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ I+ + ++ + + E LP S + +++V G PA + KA+ +I L ++ R
Sbjct: 154 KQIQDASGVRM-VAQKEMLPQ---STERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGT 209
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+L + + Q P VG PA N G G G
Sbjct: 210 VLYNPAVRVQ--------PGVGP---------------------GPAANGGSAPAGGMG- 239
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
G S GA+ D S + + AA R P T E G
Sbjct: 240 --------GRSYNRTGHGADFSDSPPAFSRRSGSD-------AASRPPP----PTHTEDG 280
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMVQI 401
+ + T I +PS +GC+IGRGG+ ISE+R + A I I K ++D E M I
Sbjct: 281 EEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIA------KAPHDDTGERMFTI 334
Query: 402 TGSLDVASSALSQVTLRLRANTFEREGA 429
TGS AL + L A R A
Sbjct: 335 TGSASANEKALYLLYENLEAEKMRRSQA 362
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGSSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V+ A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQVAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFSSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 35/274 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHNDVDG---SSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQVAREMVLEIIREKDQADFR---------GVRGDFSSRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I+ + R L+ + + G + VG+ G
Sbjct: 312 HAAHVISELILTAQERDGFGGLAVARGRGRGRGDWS----VGTPGGIQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I Q+SGA +++
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 19/144 (13%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P +G +IG+GG I +I+ ESG I++ +SSG C++ T E +I
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL-TGTPE-------SIE 135
Query: 326 AALRLQPRCSEKTERESG-----DPVITTR-ILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A RL + ++ G D T + +L+P++++G +IG+GG I +++ T
Sbjct: 136 QAKRLLGQIVDRCRNGPGFHNDVDGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVK 195
Query: 380 IRILTNENVPKVAYEDEEMVQITG 403
+ ++ + +P A ++ ++ITG
Sbjct: 196 MVMIQDGPLPTGA---DKPLRITG 216
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 48/367 (13%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P + +G +IGKGG S IR+ + GC V + + N F +
Sbjct: 58 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 103
Query: 108 EFVSPAQDALFR-VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
P Q A+ R + +++ + +T ML+PAD+IG VIGKGG+ I+ +
Sbjct: 104 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 163
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR--KALVQIASRLHENPSRSQHLL 224
+ ++ +R A + L++ G PA + KALV + N + LL
Sbjct: 164 QEQSG--LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVH---NIMNNTQGNAPLL 218
Query: 225 LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
+ +Q SG + G Y A+ +A ++ P + G +IGKGG +I
Sbjct: 219 QRAP---HQPSGQF--------GGGYGAQEAQAKG-----EVIVPRLSAGMIIGKGGEMI 262
Query: 285 KQIRQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAAL-RLQPRCSEKTERE 341
K++ E+G I K D++ D + + T++ + IT + R +R
Sbjct: 263 KRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRAIKNNGAPQDRG 322
Query: 342 SGDPVITTRIL----VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
S V+ + + VP+ + G +IG+GG I ++ T A+ + + EDE+
Sbjct: 323 SAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAP---AAEQKNEDEK 379
Query: 398 MVQITGS 404
+ +I GS
Sbjct: 380 VFEIKGS 386
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++++R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFASRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFASRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S +E +
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLAVARGRGRGRGDWSMG-TPGGIQEIT 358
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 359 YTV--PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 64/303 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+TE+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI-----TTRILVPSAQIGCLIGRG 365
+ F + + +R + + + R GD + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVR--GDFASRMGGGSIEVSVPRFAVGIVIGRN 272
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
G +I ++++ I+ ++ + E Q+ G D A + V L E
Sbjct: 273 GEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVINELILTAQE 326
Query: 426 REG 428
R+G
Sbjct: 327 RDG 329
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 72/376 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFTSR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G VIG+ G +IK+I+ ++G I+ DD I + P AA +
Sbjct: 263 FVVGIVIGRNGEMIKKIQNDAGVRIQFKP-----DDGISPERAAQVMGPPDRCQHAAPII 317
Query: 331 QPRCSEKTERESGDPVITTR---------------------ILVPSAQIGCLIGRGGAII 369
ERE + TR VP+ + G +IG+GG I
Sbjct: 318 NELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENI 377
Query: 370 SEMRSATRASIRILTN 385
+ + A + + N
Sbjct: 378 KSINQQSGAHVELQRN 393
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHNDMDG---NSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR V D + G + +
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG----VRSDFTSRAGGGSIEVSVP 261
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R +V G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 262 RFVV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E +Q + + + G S VG+ G
Sbjct: 312 HA----APIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 65/282 (23%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDMDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGGG---SIEVSVPRFVVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
G +I ++++ I+ ++ + E Q+ G D
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPD 308
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 155/376 (41%), Gaps = 72/376 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFTSR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G VIG+ G +IK+I+ ++G I+ DD I + P AA +
Sbjct: 263 FVVGIVIGRNGEMIKKIQNDAGVRIQFKP-----DDGISPERAAQVMGPPDRCQHAARII 317
Query: 331 QPRCSEKTERESGDPVITTR---------------------ILVPSAQIGCLIGRGGAII 369
ERE + TR VP+ + G +IG+GG I
Sbjct: 318 NELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQEITYTVPADKCGLVIGKGGENI 377
Query: 370 SEMRSATRASIRILTN 385
+ + A + + N
Sbjct: 378 KSINQQSGAHVELQRN 393
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHNDMDG---NSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR V D + G + +
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG----VRSDFTSRAGGGSIEVSVP 261
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R +V G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 262 RFVV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E +Q + + + G S VG+ G
Sbjct: 312 HA----ARIINELILTAQEREILGGLTVTRGRGRGRSDWSVGTPGGVQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 121/303 (39%), Gaps = 66/303 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDMDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGGG---SIEVSVPRFVVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ A +RI + P E Q+ G D A +++ L
Sbjct: 272 NGEMIKKIQN--DAGVRI---QFKPDDGISPERAAQVMGPPDRCQHA-ARIINELILTAQ 325
Query: 425 ERE 427
ERE
Sbjct: 326 ERE 328
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 63/408 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +P T Q+ D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GAPRQGSPSATTRQKP--QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSTACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
KA +I ++ E+ ++ + + + + G+ L+A +G + S+ +
Sbjct: 335 ETCAKAEEEIMKKIRES---YENDIAAMNLQAHLIPGLNLNA--LGLFPPSSSGIPPPAV 389
Query: 260 REF------------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 390 SVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--AP 447
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AEG D ++ I+ P A R+ + E+ + V + I VPS
Sbjct: 448 AEGPDAKLRMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYA 502
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 56 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 111
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 112 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEI--LIPAS 159
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 160 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 216
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 217 EIIREKD----------------------QADFRGVRGDFSSRLGGG-----SIEVSVPR 249
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 250 FAVGIVIGRNGEMIKKIQNDAGVRIQ 275
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 121/300 (40%), Gaps = 55/300 (18%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G +T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 136 RNGPGFHNDVDG---NNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 192
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D L ++
Sbjct: 193 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFSSRLGGGSI 243
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P
Sbjct: 244 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GVSPERAAQVMGPP---- 294
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR-EF 262
R QH +++I + L+A +G + R +R ++
Sbjct: 295 --------------DRCQH-----AAHIINE--LILTAQERDGFGGLAVARGRGRSRGDW 333
Query: 263 SL---------RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
++ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 334 NMGTAGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFT 393
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 116/295 (39%), Gaps = 48/295 (16%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
+IT VP +G +IG+GG+ I I+ E+ +I Q+A E
Sbjct: 64 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKI-------------------QIASE- 103
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+S + E P +L + +I Q+ L +V N ++
Sbjct: 104 ----------SSGIPERPC----VLTGTPESIEQAK--RLLGQIVDRCRNGPGFHNDVDG 147
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFISTKEF- 316
++ PA +G VIGKGG IKQ+++ +G + + G G D + I+ F
Sbjct: 148 NNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFK 207
Query: 317 FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISEMR 373
+ + +R + + + R + + + VP +G +IGR G +I +++
Sbjct: 208 VQQAREMVLEIIREKDQADFRGVRGDFSSRLGGGSIEVSVPRFAVGIVIGRNGEMIKKIQ 267
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
+ I+ ++ V E Q+ G D A + + L ER+G
Sbjct: 268 NDAGVRIQFKPDDGV-----SPERAAQVMGPPDRCQHA-AHIINELILTAQERDG 316
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 163/368 (44%), Gaps = 50/368 (13%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG----CDERI 90
++ G+GS T P + +G +IG+GGE + +L+SET + I+++ P +R
Sbjct: 149 QRAGLGSM-TTEEVKIPNKYVGLVIGRGGEQINKLQSETGARIQVAPDPPAGMMSPPDRS 207
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
VTI + + V A+ L ++ + DSL + M++PA
Sbjct: 208 VTIGGTVQA----------VEKAKQVLNKICEEGKIPDSLMSVPVVAPGEQVIEMMIPAS 257
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +IGKGG+ I+N+ + RAQ R++ + P A + ++ L++ G+
Sbjct: 258 KVGLIIGKGGETIKNL--QERAQCRMVMVQDGPY-ANAPEKPLRIMGD------------ 302
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ R + L+ +++ + S P + G R+D +L + P
Sbjct: 303 ---NTRCQRGKDLV----TDLLTEKELEQSKPALDFLGK---RQDNRQLGATTLEIPVPR 352
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFISTKEFFEDPSPTITAA 327
+G VIGKGG IK+I+ ESGA ++ + + D ++E + I
Sbjct: 353 DVVGFVIGKGGETIKRIQAESGARVQFNPAKDNPNSSDRMATVQGSQEQIQKVEKIINEI 412
Query: 328 L----RLQPRCSEKTERESGDPVITT-RILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ Q + P I T + VP + G +IG+GG I ++ + + A + +
Sbjct: 413 ISQVESRQRGGPPPRGPPANMPGINTLEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVEL 472
Query: 383 LTNENVPK 390
N NVP+
Sbjct: 473 --NRNVPE 478
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 156/387 (40%), Gaps = 83/387 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR +T +S+ VPG +R++T+ + G
Sbjct: 44 RAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGI------ 97
Query: 107 GEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
DA V D +V A G +R+L+ +Q+G +IG+ G I+
Sbjct: 98 -------ADAYGLVADSLVKGAPQMGMGGVVGSPNTHPIRLLISHNQMGTIIGRQGLKIK 150
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
I+ + ++ + + E LP S + +++V G P ++K++ +I L ++ R
Sbjct: 151 QIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGY--- 203
Query: 225 LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
G L +P V G PA N +G GGG
Sbjct: 204 -----------GTVLYSPAVRVQGG-----------------APPAINGASPVGFGGGAP 235
Query: 285 KQI-RQESGASIKVDSSGAEGDDCIIFISTKEFFED--PSPTITAALRLQPRCSEKTERE 341
+ R +GA +SGA + + D P P + E
Sbjct: 236 RSFARTGNGADF---TSGAPASS---YPPRRNGGSDAGPPPVV----------------E 273
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMV 399
G+ + T I +P+ +GC+IGRGG+ ISE+R ++ A I I K +++ E M
Sbjct: 274 DGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIA------KAPHDESGERMF 327
Query: 400 QITGSLDVASSALSQVTLRLRANTFER 426
ITG AL + L A R
Sbjct: 328 TITGGPSANEKALYLLYENLEAEKMRR 354
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H S + + + G P+
Sbjct: 280 TQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPH----DESGERMFTITGGPSA 335
Query: 202 VRKALVQIASRLH-ENPSRSQ 221
KAL + L E RSQ
Sbjct: 336 NEKALYLLYENLEAEKMRRSQ 356
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 86/175 (49%), Gaps = 31/175 (17%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ +
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT--------------- 69
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL--------TLITVRMLVPADQIGCVIGKGGQVIQ 164
+++F+ I + +F ++ IT+R++VPA Q G +IGKGG I+
Sbjct: 70 --NSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIK 127
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
IR T A I++ E LP S + + ++G + + + I + E+P +
Sbjct: 128 EIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLESPPK 178
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA I + + T F+
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTNSIFKA-- 75
Query: 322 PTITAALRLQPRCSEKTERESGD----PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ + CS+ + +SG P IT R++VP++Q G LIG+GG+ I E+R T
Sbjct: 76 -FTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 134
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP-- 435
ASI++ +E +P E V I+G+ S A++Q + E PP
Sbjct: 135 ASIQV-ASEMLPN---STERAVTISGT----SEAITQCIYHICCVMLES-------PPKG 179
Query: 436 -VLPYVP 441
+PY P
Sbjct: 180 ATIPYRP 186
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 38/178 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
D + A+ L DD +TL T+R+++ ++G +IGK G++++ R E+ A+I I D
Sbjct: 2 DNMDAKPVLNDDP--SVTL-TIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGS 57
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + ++ V G + KA I + E S + QS G
Sbjct: 58 CP------ERIVTVTGPTNSIFKAFTLICKKFEE---------WCSQFHDIQSGGGVPRP 102
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P+ +LRL+ PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 103 PI-------------------TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAS 141
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
G+ R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +
Sbjct: 98 GVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGT 157
Query: 97 SE 98
SE
Sbjct: 158 SE 159
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + VP+ IGC+IG+GG I+E+R + A IRI E + + + ITG+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 408 ASSA--LSQVTLRLRANTFERE 427
+ A L +++ L+ E +
Sbjct: 425 VALAQYLISMSVELQKANLEAQ 446
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 48/367 (13%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P + +G +IGKGG S IR+ + GC V + + N F +
Sbjct: 11 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 56
Query: 108 EFVSPAQDALFR-VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
P Q A+ R + +++ + +T ML+PAD+IG VIGKGG+ I+ +
Sbjct: 57 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 116
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR--KALVQIASRLHENPSRSQHLL 224
+ ++ +R A + L++ G PA + KALV + N + LL
Sbjct: 117 QEQSG--LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKALVH---NIMNNTQGNAPLL 171
Query: 225 LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
+ +Q SG + G Y A+ +A RL + G +IGKGG +I
Sbjct: 172 QRAP---HQPSGQF--------GGGYGAQEAQAKGEVIVPRL-----SAGMIIGKGGEMI 215
Query: 285 KQIRQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAAL-RLQPRCSEKTERE 341
K++ E+G I K D++ D + + T++ + IT + R +R
Sbjct: 216 KRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATERITEIVNRAIKNNGAPQDRG 275
Query: 342 SGDPVITTR----ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE 397
S V+ + + VP+ + G +IG+GG I ++ T A+ + + EDE+
Sbjct: 276 SAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAP---AAEQKNEDEK 332
Query: 398 MVQITGS 404
+ +I GS
Sbjct: 333 VFEIKGS 339
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 50/283 (17%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSS 96
G T R+L GS+IGKGG + ++++ + I++S E PG +R+ + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
++ A + +I+ +D+ D + I V++LVP G +I
Sbjct: 71 -------------LADVLTAFQLIISKIIKDDNQDDTKS-----IQVKLLVPKTVCGAII 112
Query: 157 GKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
GKGG I+ +++A I++ +D+ LP D ++ + G + KA+ I ++L E
Sbjct: 113 GKGGSNIKKFVEDSQASIKLSSQDQLLPGV---IDRIVTIGGNVDQIIKAVTLILTKLTE 169
Query: 216 NPSRSQHLLLSSSSNIYQSS--------GVYLSAPLVGSYGNYSARRD---------EAS 258
S ++ +S+ +Y + VY ++P G + RR+
Sbjct: 170 ESSYTET---TSTPLVYPGTRPTSFIVRCVYHASP-----GLQNLRRNGPGPPMPVAYVG 221
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
A S+ + P +IG ++G+ G +++++Q SGA IKV G
Sbjct: 222 ALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVSDRG 264
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS- 321
+LR + G VIGKGG I + +SGA I++ + E+F S
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 322 ---------PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
+ A +L K + + I ++LVP G +IG+GG+ I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 373 RSATRASIRILTNEN-VPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ASI++ + + +P V + +V I G++D A++ + +L
Sbjct: 123 VEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKL 167
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 42/261 (16%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGKGG V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNV------------SGPL-----DAV 120
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F ++ +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 121 SKAFGLIVRR--INDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGA 178
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + +L VAG + A I + L E +Q + S+S++ Y
Sbjct: 179 KLNASEG----MLPGSTERVLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTY 230
Query: 233 QSS---------GVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+ S G P + Y + + + ++ P +G +IGKGG
Sbjct: 231 RPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 289
Query: 284 IKQIRQESGASIKVDSSGAEG 304
I +IR S + IK+ GA G
Sbjct: 290 INEIRHMSASQIKIMEPGATG 310
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 143 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 99 ---------GTNLFEDSGEFVSPAQDALFRVHDR---------------IVAEDSLADDE 134
GT L E + E + ++ +R +
Sbjct: 203 AIHIATYYIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPH 261
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL---PLCALSFDE 191
L T ++ +P D +GC+IGKGG I IR + +QI+I++ P A E
Sbjct: 262 NPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSE 321
Query: 192 ---LLQVAGEPAVVRKALVQIASRLHE 215
L+ + G+PA ++ A+ + RL +
Sbjct: 322 GERLVVITGQPANIQMAVQLLYHRLEQ 348
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 127/331 (38%), Gaps = 89/331 (26%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGKGG + IR ++ A R++ E +P + + +L V+G
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPG---NPERILNVSGPLD 118
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I R+++ P P V +R
Sbjct: 119 AVSKAFGLIVRRINDEP---------------------FDVPSV------------PGSR 145
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF--------IS 312
+++ + P +G VIGKGG IK+I+ SGA + G + I
Sbjct: 146 AVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIH 205
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDP--------------------------- 345
++ + I A R+ P S T R S P
Sbjct: 206 IATYYIG-TILIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNP 263
Query: 346 ---VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT------NENVPKVAYEDE 396
+ T +I +P+ +GC+IG+GG+ I+E+R + + I+I+ N E E
Sbjct: 264 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGE 323
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFERE 427
+V ITG A Q+ ++L + E+E
Sbjct: 324 RLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 27/132 (20%)
Query: 327 ALRLQPRCSEKTERESGDPVITTRILVPSAQIG--CLI---------GRGGAIISEMRSA 375
+++ P +K G+ T + PSA I CLI G+GG+ ++E+R
Sbjct: 33 SIKSNPDSGDKAGSSYGEASTTASAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREK 92
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
+ A R++ +E++P E ++ ++G LD S A + R+ F+
Sbjct: 93 SGA--RVMVSESIPG---NPERILNVSGPLDAVSKAFGLIVRRINDEPFD---------- 137
Query: 436 VLPYVPMSLDIT 447
+P VP S +T
Sbjct: 138 -VPSVPGSRAVT 148
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 42/261 (16%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGKGG V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNV------------SGPL-----DAV 120
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F ++ +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 121 SKAFGLIVRR--INDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGA 178
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + +L VAG + A I + L E +Q + S+S++ Y
Sbjct: 179 KLNASEG----MLPGSTERVLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTY 230
Query: 233 QSS---------GVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+ S G P + Y + + + ++ P +G +IGKGG
Sbjct: 231 RPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVGCIIGKGGSK 289
Query: 284 IKQIRQESGASIKVDSSGAEG 304
I +IR S + IK+ GA G
Sbjct: 290 INEIRHMSASQIKIMEPGATG 310
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 143 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 99 ---------GTNLFEDSGEFVSPAQDALFRVHDR---------------IVAEDSLADDE 134
GT L E + E + ++ +R +
Sbjct: 203 AIHIATYYIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPH 261
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL---PLCALSFDE 191
L T ++ +P D +GC+IGKGG I IR + +QI+I++ P A E
Sbjct: 262 NPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSE 321
Query: 192 ---LLQVAGEPAVVRKALVQIASRLHE 215
L+ + G+PA ++ A+ + RL +
Sbjct: 322 GERLVVITGQPANIQMAVQLLYHRLEQ 348
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 127/331 (38%), Gaps = 89/331 (26%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGKGG + IR ++ A R++ E +P + + +L V+G
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPG---NPERILNVSGPLD 118
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I R+++ P P V +R
Sbjct: 119 AVSKAFGLIVRRINDEP---------------------FDVPSV------------PGSR 145
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF--------IS 312
+++ + P +G VIGKGG IK+I+ SGA + G + I
Sbjct: 146 AVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIH 205
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDP--------------------------- 345
++ + I A R+ P S T R S P
Sbjct: 206 IATYYIG-TILIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPPHNP 263
Query: 346 ---VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT------NENVPKVAYEDE 396
+ T +I +P+ +GC+IG+GG+ I+E+R + + I+I+ N E E
Sbjct: 264 PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGSEGE 323
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFERE 427
+V ITG A Q+ ++L + E+E
Sbjct: 324 RLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 27/132 (20%)
Query: 327 ALRLQPRCSEKTERESGDPVITTRILVPSAQIG--CLI---------GRGGAIISEMRSA 375
+++ P +K G+ T + PSA I CLI G+GG+ ++E+R
Sbjct: 33 SIKSNPDSGDKAGSSYGEASTTAPAVPPSANIHMRCLIVTQDASIIIGKGGSHVNEIREK 92
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
+ A R++ +E++P E ++ ++G LD S A + R+ F+
Sbjct: 93 SGA--RVMVSESIPG---NPERILNVSGPLDAVSKAFGLIVRRINDEPFD---------- 137
Query: 436 VLPYVPMSLDIT 447
+P VP S +T
Sbjct: 138 -VPSVPGSRAVT 148
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++ AR A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFGAR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFGARAGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S A
Sbjct: 312 HA----AHVINE--------LILTAQERDGFGGLAVARGRGRGRGDWSV---GAPGGIQE 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I Q+SGA +++
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 120/304 (39%), Gaps = 64/304 (21%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 76 AVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT------- 128
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P + +A L QI R P H + +S I +
Sbjct: 129 -GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE------------------- 166
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIF 310
++ PA +G VIGKGG IKQ+++ +G + + G G D +
Sbjct: 167 -------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR 213
Query: 311 ISTKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI-----TTRILVPSAQIGCLIGR 364
I+ F + + +R + + + R GD + + VP +G +IGR
Sbjct: 214 ITGDPFKVQQAREMVLEIIREKDQADFRGVR--GDFGARAGGGSIEVSVPRFAVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ A +RI + P E Q+ G D A + V L
Sbjct: 272 NGEMIKKIQN--DAGVRI---QFKPDDGISPERAAQVMGPPDRCQHA-AHVINELILTAQ 325
Query: 425 EREG 428
ER+G
Sbjct: 326 ERDG 329
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 46/213 (21%)
Query: 23 GGSKRRNPGDETEQRGIGSED--TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
G SKR N G E G ED + + L P GSIIGKGG+ + QL+ ET + I++S
Sbjct: 48 GNSKRSNFGGEG-----GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 102
Query: 81 ET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLA------ 131
++ PG ERIV I S +D+L VH ++ + S A
Sbjct: 103 KSNDFYPGTTERIVVITGS-----------------EDSLKSVHKFLMEKISQAPQPPAK 145
Query: 132 ---DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE----HLPL 184
+ V+++VP G +IGKGG I+ I +T ++++I + +LP
Sbjct: 146 SPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLP- 204
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ ++ + GEP KA I +++ E+P
Sbjct: 205 -----ERVITITGEPEQNDKACAFIVNKIVEDP 232
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG----AEGDDCIIFISTKEF 316
+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S + ++ +++
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 317 FEDPSPTITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+ + + P+ K+ E + + +I+VP++ G +IG+GGA I +
Sbjct: 125 LKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 374 SATRASIRI---LTNE-NVPKVAYEDEEMVQITG 403
T + ++I TN N+P E ++ ITG
Sbjct: 185 EQTGSRVQISQKATNGINLP------ERVITITG 212
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 50/204 (24%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G+L L ++L+P+ G +IGKGGQ I ++ ET A I++ K
Sbjct: 62 EDGQLLL---KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDF----------- 107
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
P + +V S E+ +S H L I Q+ +P +
Sbjct: 108 ----YPGTTERIVVITGS---EDSLKSVHKFL--MEKISQAPQPPAKSP---------SE 149
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--------- 304
++ + R +++V P G +IGKGG IK I +++G+ +++ G
Sbjct: 150 QNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLPERVIT 209
Query: 305 --------DDCIIFISTKEFFEDP 320
D FI K EDP
Sbjct: 210 ITGEPEQNDKACAFIVNK-IVEDP 232
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 191/447 (42%), Gaps = 71/447 (15%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNEN-----------VPKVAYEDEE---MVQITGSL---DVA 408
G S + + L N VP+ DE +V+ITG VA
Sbjct: 507 GKTASTSAKPVQWTCVYLVQVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVA 566
Query: 409 SSALSQVTLRLRANTFEREGALAAHPP 435
+ ++ +++ + +++ AL + PP
Sbjct: 567 QRKIQEILTQVKQH--QQQKALQSGPP 591
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 120 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERP 175
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 176 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEI--LIPAS 223
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 224 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 280
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 281 EIIREKD----------------------QADFRGVRSDFSSRMGGG-----SIEVSVPR 313
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 314 FAVGIVIGRNGEMIKKIQNDAGVRIQ 339
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G +T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 200 RNGPGFHNDVDG---NNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLP 256
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 257 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRSDFSSRMGGGSI 307
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + + QV G P +
Sbjct: 308 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMGLPERCQ 362
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I S +L + + + S LS P G R D +
Sbjct: 363 HAAHVI----------SDLILTAQERDGFGS----LSVP----RGRGRGRSDWSVGAPGG 404
Query: 264 LRLV---CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
L+ V PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 405 LQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFT 457
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 19/143 (13%)
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITA 326
P +G +IG+GG I +I+ ESG I++ +SSG C++ T E +I
Sbjct: 136 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVL-TGTPE-------SIEQ 187
Query: 327 ALRLQPRCSEKTERESG-----DPVITTR-ILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A RL + ++ G D T + IL+P++++G +IG+GG I +++ T +
Sbjct: 188 AKRLLGQIVDRCRNGPGFHNDVDGNNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKM 247
Query: 381 RILTNENVPKVAYEDEEMVQITG 403
++ + +P A ++ ++ITG
Sbjct: 248 IMIQDGPLPTGA---DKPLRITG 267
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 121/304 (39%), Gaps = 66/304 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 128 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLT-------- 179
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + ++ I +
Sbjct: 180 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDVDGNNTIQE-------------------- 217
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 218 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRI 265
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ + R G + + VP +G +IGR
Sbjct: 266 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---SIEVSVPRFAVGIVIGR 322
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E + Q+ G + A + V L
Sbjct: 323 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERVAQVMGLPERCQHA-AHVISDLILTAQ 376
Query: 425 EREG 428
ER+G
Sbjct: 377 ERDG 380
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 131/307 (42%), Gaps = 81/307 (26%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSII K GE VK++R E+ + IS+ C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+A+F+ I+ + S+ + + +R++VPA Q G +IGKGG
Sbjct: 66 --------NAIFKAFAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGG 117
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + +AG P + + + QI + E S+
Sbjct: 118 CKIKEIRESTGAQVQVAGD----MLPNSTEWAITIAGIPQSLIECVKQICVVMLETLSQP 173
Query: 221 QH-----------------LLL------------SSSSNIYQSSGVYLSAPLVG------ 245
H L++ S+S + + + L+ L G
Sbjct: 174 PHPHPKGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELT 233
Query: 246 --------------SYGN--YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
++GN +SA D ASA+ S L IG +IG+ G I +IRQ
Sbjct: 234 KLHQLALQQSHFPMTHGNTGFSAGLD-ASAQTTSHELTISNDLIGCIIGRQGAKINEIRQ 292
Query: 290 ESGASIK 296
SGA IK
Sbjct: 293 MSGAQIK 299
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T R+L+ ++G +I K G+ ++ +R E+ A+ I D + P + ++ +AG
Sbjct: 14 LTSRLLMHGKEVGSIIAKKGESVKKMREESGARTSI-SDGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E + S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEG--------------------------ISSSMTNSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTI 324
RL+ +G +I K G +K++R+ESGA + + T F+ + I
Sbjct: 17 RLLMHGKEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFA-MI 75
Query: 325 TAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
L S + P + R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 76 IDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 107 TKRINTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 158
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 159 FYPGTTERVCLVQGTAEALNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 217
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 218 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 269
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 270 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 298
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 117 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 176
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 177 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 231
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 232 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 286
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 154/366 (42%), Gaps = 53/366 (14%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED-----SGEFVSP 112
+IG+GGE + +L+SET I+++ G ER T+ S + N ++ + V P
Sbjct: 92 VIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQRVKP 151
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLI----TVRMLVPADQIGCVIGKGGQVIQNIRT 168
+D + + S A L V +++P ++G +IGKGG+ I+ ++
Sbjct: 152 GEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQE 211
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA-------LVQIASRLHENPSRSQ 221
++ A++ +++D ++ L++ G+P V A + + +L+ +R+
Sbjct: 212 KSGAKMVVIQDG----PGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNRGTRN- 266
Query: 222 HLLLSSSSNIYQSSGVYLSAP------LVG---SYGNYSARRDEASAR-EFSLRLVCPAG 271
SS+N + G S + G YG++ R + EFS + P+
Sbjct: 267 ----FSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGNRPAGEGKVEFSYPV--PSN 320
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVD--SSGAEGDDCIIFISTKEFFEDPSPTITAALR 329
G +IGKGG IK+I Q++GA ++D + G + D T E E L
Sbjct: 321 KCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQVEHAKRVFAEKLG 380
Query: 330 LQPRCSEKTERESGDP-------------VITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
S +G P + VP+ + G +IG+GG I ++ T
Sbjct: 381 GG-MGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQT 439
Query: 377 RASIRI 382
A +
Sbjct: 440 GAHCEL 445
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 116/302 (38%), Gaps = 54/302 (17%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFED-S 106
+ P K+G IIGKGGE +KQL+ ++ + + + + PG + E+ + I + +
Sbjct: 189 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEHAKQLV 248
Query: 107 GEFVSPAQDALFRVHDR-IVAEDSLADD-------------------EFGELT------- 139
E ++ + L+ R + +S + D E+G
Sbjct: 249 YELIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGNRPAGE 308
Query: 140 -LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+ VP+++ G +IGKGG I+ I +T A + D P D+ + G
Sbjct: 309 GKVEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCEL--DRRNP--GTDTDKFFTIRGT 364
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
P V A A +L S + + N YG + R
Sbjct: 365 PEQVEHAKRVFAEKLGGGMGSSSNGYPTGRPN---------------EYGGWDVNRQ--- 406
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD--SSGAEGDDCIIFISTKEF 316
+ + P G +IGKGG IKQI Q++GA ++D + G E + T E
Sbjct: 407 GNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTIKGTPEQ 466
Query: 317 FE 318
E
Sbjct: 467 VE 468
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 85/225 (37%), Gaps = 25/225 (11%)
Query: 8 NYGKRTHFQSDAATNGGSKRRNPG---------DETEQRGIGSEDTVYRYLCPLRKIGSI 58
N+ F D + G RR G R G + Y P K G I
Sbjct: 266 NFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGNRPAGEGKVEFSYPVPSNKCGII 325
Query: 59 IGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IGKGG +K++ +T ++ + PG D ++ TI + E E + A+
Sbjct: 326 IGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPE---QVEHAKRVF--AEKLG 380
Query: 118 FRVHDRIVAEDSLADDEFGELTL------ITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
+ + +E+G + + V VP ++ G +IGKGG+ I+ I +T
Sbjct: 381 GGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQTG 440
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
A + D P ++ + G P V A + +L N
Sbjct: 441 AHCEL--DRRNP--GTETEKFFTIKGTPEQVEHAQRIFSEKLGNN 481
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 90/179 (50%), Gaps = 33/179 (18%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 56
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIG 157
+A+F+ I+ D L +D +T +T+R++VPA Q G +IG
Sbjct: 57 ---------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIG 105
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
KGG I+ IR T AQ+++ D LP S + + +AG P + + + QI + E
Sbjct: 106 KGGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKQICVVMLET 160
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 57
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 58 AIFKAFAMIIDKLEEDIS--------------------------SSMTNSTA----ASRP 87
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 88 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 124
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + S G + I
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCPERIITLAGPTNAIFKAF 63
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 64 AMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 123
Query: 382 I 382
+
Sbjct: 124 V 124
>gi|390335395|ref|XP_003724137.1| PREDICTED: far upstream element-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 689
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 54/282 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G++ + G G+E+ + P + +G IIG+ G+ + L+SE+ NI+I+ +R
Sbjct: 129 GEDQNRDGHGTEE----FFVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISGDRQ 184
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
VT+ + E V A+ + + ++ ++ + +TV ML+PA
Sbjct: 185 VTLTGTPEA----------VMHAKSLILDIVNKASQNEAEGN--------MTVDMLIPAT 226
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ + + +A +R++ + P+ A D+ L+++G+ + +A ++
Sbjct: 227 KVGLVIGKGGETIKQL--QEQAGVRMVMIQEGPV-ATGMDKPLRISGDSQKIEEAK-RLV 282
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
S + EN + SS N Y G + +D ++ P
Sbjct: 283 SEVMENAKNNDR---SSGDNFYSRGGPH---------------KD----------VIVPK 314
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+G VIG+GG +IK+I++++ A ++ + + + I+
Sbjct: 315 HAVGMVIGRGGDMIKRIQEQTKARVQFKPGDRDAPERVALIT 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 65/285 (22%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T VP +G +IG+ GQ I ++++E+ I+I P +S D + + G P
Sbjct: 139 TEEFFVPNKMVGLIIGRQGQQISSLQSESGCNIQIA-----PENGISGDRQVTLTGTPEA 193
Query: 202 VRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
V A I +++ A ++EA
Sbjct: 194 VMHAKSLILDIVNK------------------------------------ASQNEAEGN- 216
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFISTKEFFED 319
++ ++ PA +G VIGKGG IKQ+++++G + + G A G D + IS
Sbjct: 217 MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLRISGD----- 271
Query: 320 PSPTITAALRLQPRCSEK---TERESGDPVIT-----TRILVPSAQIGCLIGRGGAIISE 371
S I A RL E +R SGD + ++VP +G +IGRGG +I
Sbjct: 272 -SQKIEEAKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVIGRGGDMIKR 330
Query: 372 MRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++ T+A ++ + + P E + ITGS + S A S V
Sbjct: 331 IQEQTKARVQFKPGDRDAP------ERVALITGSAESVSMAESMV 369
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEG 304
+Y RD EF P +G +IG+ G I ++ ESG +I++ +G G
Sbjct: 126 TYEGEDQNRDGHGTEEF----FVPNKMVGLIIGRQGQQISSLQSESGCNIQIAPENGISG 181
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
D + T E + A L K + + +T +L+P+ ++G +IG+
Sbjct: 182 DRQVTLTGTPE-------AVMHAKSLILDIVNKASQNEAEGNMTVDMLIPATKVGLVIGK 234
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
GG I +++ +A +R++ + P VA ++ ++I+G
Sbjct: 235 GGETIKQLQE--QAGVRMVMIQEGP-VATGMDKPLRISG 270
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 17 SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
S+ N + R+ GD RG +D + P +G +IG+GG+++K+++ +TK+
Sbjct: 283 SEVMENAKNNDRSSGDNFYSRGGPHKDVI----VPKHAVGMVIGRGGDMIKRIQEQTKAR 338
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFE 104
++ ER+ I S+E ++ E
Sbjct: 339 VQFKPGDRDAPERVALITGSAESVSMAE 366
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 128/310 (41%), Gaps = 83/310 (26%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
++ GSIIGK G+ VK+ R ++ + I IS++ C ERIVT+ +++ +F+
Sbjct: 11 KEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTTD--QIFKAFTMICKK 66
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
++ + H+ +L +T+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 67 FEEDIVNTHN----STTLPKPP------VTLRLIVPASQCGSLIGKGGAKIKEIRELTGA 116
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR------------- 219
I++ E LP S + + V+G+ + + + I + E+P +
Sbjct: 117 SIQV-ASEMLP---NSTERAVTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVP 172
Query: 220 -----------------SQHLLLSSSSNIYQSSGVYLSAPL-VGSYGNYSAR-------- 253
Q LL S N Q PL + + AR
Sbjct: 173 PVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLIC 232
Query: 254 ---RD---------EASAREFSLRLVCPAGN--------------IGGVIGKGGGIIKQI 287
RD A +F+ R P N IG +IG+GG I +I
Sbjct: 233 IIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHEMTIPNDLIGCIIGRGGAKINEI 292
Query: 288 RQESGASIKV 297
RQ SGA+IK+
Sbjct: 293 RQLSGATIKI 302
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ G +IGK G +K+ R++SGA I + S + +T + F+ +
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFK--A 59
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
T+ + + P +T R++VP++Q G LIG+GGA I E+R T ASI+
Sbjct: 60 FTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGASIQ 119
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ +E +P E V ++G D + + + +
Sbjct: 120 V-ASEMLPN---STERAVTVSGQADAITQCIYNICCVM 153
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTI 93
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VT+
Sbjct: 87 LRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEMLPNSTERAVTV 135
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE----EMVQITG 403
T + +P+ IGC+IGRGGA I+E+R + A+I K+A DE V I G
Sbjct: 268 THEMTIPNDLIGCIIGRGGAKINEIRQLSGATI---------KIANADEGSSDRKVTIMG 318
Query: 404 SLDVASSALSQVTLR 418
SL+ +A + R
Sbjct: 319 SLETIHAAQYMINAR 333
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 46/213 (21%)
Query: 23 GGSKRRNPGDETEQRGIGSED--TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS 80
G SKR N G E G ED + + L P GSIIGKGG+ + QL+ ET + I++S
Sbjct: 48 GNSKRSNFGGEG-----GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 102
Query: 81 ET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE---------D 128
++ PG ERIV I S +D+L VH ++ +
Sbjct: 103 KSNDFYPGTTERIVVITGS-----------------EDSLKSVHKFLMEKIGQAPRPPAK 145
Query: 129 SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDE----HLPL 184
S ++ V+++VP G +IGKGG I+ I +T ++++I + +LP
Sbjct: 146 SPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLP- 204
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ ++ + GEP KA I +++ E+P
Sbjct: 205 -----ERVITITGEPEQNDKACAFIVNKIVEDP 232
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG----AEGDDCIIFISTKEF 316
+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S + ++ +++
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 317 FEDPSPTITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+ + + PR K+ E + + +I+VP++ G +IG+GGA I +
Sbjct: 125 LKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 374 SATRASIRI----LTNENVPKVAYEDEEMVQITG 403
T + ++I + N+P E ++ ITG
Sbjct: 185 EQTGSRVQISQKATSGINLP------ERVITITG 212
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 50/204 (24%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G+L L ++L+P+ G +IGKGGQ I ++ ET A I++ K
Sbjct: 62 EDGQLLL---KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDF----------- 107
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
P + +V S E+ +S H L I Q+ +P +
Sbjct: 108 ----YPGTTERIVVITGS---EDSLKSVHKFL--MEKIGQAPRPPAKSP---------SE 149
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG--------- 304
++ + R +++V P G +IGKGG IK I +++G+ +++ G
Sbjct: 150 QNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLPERVIT 209
Query: 305 --------DDCIIFISTKEFFEDP 320
D FI K EDP
Sbjct: 210 ITGEPEQNDKACAFIVNK-IVEDP 232
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 63/408 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +P T Q+ D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GPPRQGSPSATTRQKP--QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSTACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
KA +I ++ E+ ++ + + + + G+ L+A +G + S+ +
Sbjct: 335 ETCAKAEEEIMKKIRES---YENDIAAMNLQAHLIPGLNLNA--LGLFPPSSSGIPPPAV 389
Query: 260 REF------------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 390 SVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--AP 447
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AEG D ++ I+ P A R+ + E+ + V + I VPS
Sbjct: 448 AEGPDAKLRMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYA 502
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 181/422 (42%), Gaps = 69/422 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDERIVTIYSSSEGT 100
D R L +G+IIG+ G ++Q+ +++ + + + V G E+ +TIY + E
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV-GSLEKAITIYGNPEN- 183
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
A R+ + V + + GE+ L ++L + IG +IGK G
Sbjct: 184 ------------CTSACKRILE--VMQQEANNTNKGEICL---KILAHNNLIGRIIGKSG 226
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
I+ I +T +I + + D + + + + ++ V G + + QI+++L +E
Sbjct: 227 NTIKRIMQDTDTKITVSSIND----INSFNLERIITVKGSIDNMSRGESQISAKLRQSYE 282
Query: 216 N------------PSRSQHLLLSSSSN---IYQSSGVY--LSAPLVGSYGNYSARRDEAS 258
N P ++S++ N +G+Y S P+ A +
Sbjct: 283 NDLQALAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAPPGSSD 342
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+E + L P +G +IG G I+ I + SGAS+K+ + E D + + ++
Sbjct: 343 VQETTY-LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEADKPLEQQTERKVTI 399
Query: 319 DPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+P A + Q EK E + D +T ILVPSAQ+G +IG+GG + E++
Sbjct: 400 VGTPE--AQWKAQYLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNVRELQ 457
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAH 433
T + I++ E+ ++E V I G SA ++ R LA +
Sbjct: 458 RVTGSIIKL--PEHTTNTPVDEETTVHIIGPFFSVQSAQRRI----------RTMMLATN 505
Query: 434 PP 435
PP
Sbjct: 506 PP 507
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 21/222 (9%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+F LRL+ + +G +IG+ G I+QI Q S A + V D+ + +P
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRK----DNVGSLEKAITIYGNP 181
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+A R L+ E G+ I +IL + IG +IG+ G I + T
Sbjct: 182 ENCTSACKRILEVMQQEANNTNKGE--ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 239
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPY 439
I + + ++ ++ E ++ + GS+D S SQ++ +LR + ALA + P
Sbjct: 240 ITVSSINDIN--SFNLERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPG 297
Query: 440 V-PMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSY 480
+ PM++ T G+ G G + TG PG SY Y
Sbjct: 298 LHPMAMMSTAGN----------GMGFTGRTGMYPG-TSYPMY 328
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 39/199 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + S+E
Sbjct: 37 KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE----- 91
Query: 104 EDSGEFVSPAQDALFRVHDRIVAE-----DSLADDEFGELT----------LITVRMLVP 148
AL VH+ I + ++ G L +++VP
Sbjct: 92 ------------ALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVP 139
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
G +IGKGG ++NI E+ A +++ + P + + ++ V+GEP+ V+KA+
Sbjct: 140 NTTAGLIIGKGGATVRNIMEESGAWVQLSQK---PAGSNLHERVVTVSGEPSQVQKAIHS 196
Query: 209 IASRLHENPSR-SQHLLLS 226
I + E+P + + HL +S
Sbjct: 197 IIHKSREDPPQGTTHLNIS 215
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 251 SARRDEASAR--EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAE 303
S +R +A E L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G
Sbjct: 21 STKRSNTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTT 80
Query: 304 GDDCII------FISTKEFF-----EDP--SPTITAALRLQPRCSEKTERESGDPVITTR 350
C++ +S F E P +P + L P+ + ER +
Sbjct: 81 ERVCLVQGSAEALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAK-----QAK 135
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
++VP+ G +IG+GGA + + + A +++
Sbjct: 136 LIVPNTTAGLIIGKGGATVRNIMEESGAWVQL 167
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 175/407 (42%), Gaps = 85/407 (20%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P +TE+ ++ T+ R + ++ G IIGKGG+ V LR ET +S+ V G +R
Sbjct: 34 PAPKTEEEYAQAQLTL-RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDR 92
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHD---RIVAEDSLADDEFGELT---LITV 143
++TI DA+ R + R + E + A G + +
Sbjct: 93 VLTITGGC-----------------DAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPI 135
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L+ +Q+G +IG+ G I++I+ + ++ + + E LP S + +++V G P ++
Sbjct: 136 KLLISHNQMGTIIGRQGLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIQ 191
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
+A+ +I L ++ R +G L P+V R + S+
Sbjct: 192 RAIWEICKCLVDDWQRG--------------TGTVLYNPVV---------RTQPSS---- 224
Query: 264 LRLVCPAGNIGGVIG--KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
GN G G +G G R + G S +V +G D F + +
Sbjct: 225 ------GGNTSGGAGFNQGSG-----RSDYGGSPRVMRTGNGAD----FSNGSSRPYNRR 269
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
AALR P T E+G+ + T I +P+ +GC+IGR G+ ISE+R + A I
Sbjct: 270 SDSDAALRGPP-----THDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARI- 323
Query: 382 ILTNENVPKVAYED--EEMVQITGSLDVASSALSQVTLRLRANTFER 426
++ K +++ E M I G+ SAL + L A R
Sbjct: 324 -----SIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEKMRR 365
>gi|308465473|ref|XP_003094996.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
gi|308246261|gb|EFO90213.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
Length = 580
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 182/428 (42%), Gaps = 69/428 (16%)
Query: 30 PGDETEQRG---IGSEDTVYR-YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG 85
P +T + G +G D + Y P + +G +IGKGG S IR+ + G
Sbjct: 35 PAKKTSEIGDLNMGDTDKIIEIYQVPEKVVGLVIGKGG-----------SEIRLIQQTSG 83
Query: 86 CDERIVTIYSSSEGTN--LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
C ++ + S G E + V+ A+ + + ++++ + + +T
Sbjct: 84 CRVQMDPDHQSVNGIRNCTIEGPPDQVAIAKQMITQCFFQVISRNQTGVPQTVATGEVTE 143
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
ML+PAD+IG VIGKGG I+ ++ ++ +R+L A + L++ G PA +
Sbjct: 144 EMLIPADKIGLVIGKGGDTIRTLQDQSG--LRLLNVVQDSSSATGQPKPLRMVGTPAAIE 201
Query: 204 --KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVG-SYGNYSARRDEASAR 260
KALV H +++SS + PL+ + + +
Sbjct: 202 TAKALV--------------HNIMNSSPG---------NPPLLPRGGQSSGGQYGGYGGQ 238
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI--KVDSSGAEGDDCIIFISTKEFFE 318
E ++ P + G +IGKGG +IK++ E+G I K D++ D + + T++
Sbjct: 239 EAKGEVIVPRVSAGMIIGKGGEMIKRLAMETGTKIQFKPDANPNSEDRVAVIMGTRDQIY 298
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRIL--------VPSAQIGCLIGRGGAIIS 370
+ IT + R + + SG + IL VP+ + G +IG+GG I
Sbjct: 299 RATERITEIVN---RAIKNGQAGSGSILGGNNILGQSTFYMHVPATKCGLVIGKGGENIK 355
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
++ + AS + + EDE++ +I G+ A V +++ G +
Sbjct: 356 QIERDSGASCGLAAAS---EQKNEDEKVFEIKGTQYQIHHASHLVKIKV--------GEI 404
Query: 431 AAHPPVLP 438
A + PV P
Sbjct: 405 APNTPVPP 412
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 28 RNPGDETEQRGIGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET--- 82
R+PG + + +E+ Y + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 133 RSPGSVSPPK---TEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 189
Query: 83 VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELT 139
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 190 YPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-- 247
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGE 198
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+GE
Sbjct: 248 ---AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGE 300
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLS 226
P V KA+ I ++ E+P S L +S
Sbjct: 301 PEQVHKAVSAIVQKVQEDPQSSSCLNIS 328
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS----- 300
S G+ S + E E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S
Sbjct: 134 SPGSVSPPKTEEG--EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 191
Query: 301 GAEGDDCII------FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVI 347
G C++ + F + I A+ LQP+ + +R
Sbjct: 192 GTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK----- 246
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
+++VP++ G +IG+GGA + + + A +++ P+ E +V ++G +
Sbjct: 247 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQ 303
Query: 408 ASSALSQVTLRLR 420
A+S + +++
Sbjct: 304 VHKAVSAIVQKVQ 316
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 175/396 (44%), Gaps = 57/396 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG-- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 253 --------CSAACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIRTETRAQIRILKDEHLPL---------------CALSFDELLQVAGEPAVVRKAL 206
++ + +T +I I + L L C + E+++ E A
Sbjct: 298 NLKKVEQDTETKITISSLQDLTLYNPERTITVKGSIENCCRAEQEIMKKVREAYENDVAA 357
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIY--QSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
+ + S L + + L +SSN S V +AP Y ++ E ++
Sbjct: 358 MSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAP----YSSFLPPEQE------TV 407
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTI 324
+ PA +G +IGK G IKQ+ + + ASIK+ + + I T P
Sbjct: 408 HVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVIITG----PPEAQF 463
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A + ++
Sbjct: 464 KAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV-VV 522
Query: 384 TNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
+ P E+E+ +V+I G +S ++Q +R
Sbjct: 523 PRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 553
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++TV+ ++ P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 QETVHVFI-PAQAVGAIIGKKGQHIKQLSRFASASIKIAPAETPDSKVRMVIITGPPEAQ 462
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 463 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 506
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 507 KTVNELQNLTAAEVVVPRDQ 526
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 59/391 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 264
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 265 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 311
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
I +T +I I L+D L + + + V G KA +I ++ E+
Sbjct: 312 IEQDTDTKITISPLQD----LTLYNPERTITVKGSIEACAKAEEEIMKKIRESYENDIAA 367
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA---------REFSLRLV 267
+ HL+ + N + G++ + + S ++ L
Sbjct: 368 MNLQAHLIPGLNLN---ALGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQQPESETVHLF 424
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTI 324
PA +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 425 IPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQF 477
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 478 KAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VV 536
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P D+ +V+ITG +S L+Q
Sbjct: 537 PRDQTPD--ENDQVVVKITGHF--YASQLAQ 563
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
+ +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 206 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 246
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 71 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERP 126
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 127 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNNTIQEI--LIPAS 174
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 175 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 231
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 232 EIIREKD----------------------QADFRGVRSDFSSRMGGG-----SIEVSVPR 264
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 265 FAVGIVIGRNGEMIKKIQNDAGVRIQ 290
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G +T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 151 RNGPGFHNDVDG---NNTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLP 207
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 208 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRSDFSSRMGGGSI 258
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + + QV G P +
Sbjct: 259 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMGLPERCQ 313
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I S +L + + + S LS P G R D +
Sbjct: 314 HAAHVI----------SDLILTAQERDGFGS----LSVP----RGRGRGRSDWSIGAPGG 355
Query: 264 LRLV---CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
L+ V PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 356 LQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFT 408
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 113/279 (40%), Gaps = 65/279 (23%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 79 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLT-------- 130
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + ++ I +
Sbjct: 131 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDVDGNNTIQE-------------------- 168
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 169 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRI 216
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ + R G + + VP +G +IGR
Sbjct: 217 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---SIEVSVPRFAVGIVIGR 273
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
G +I ++++ A +RI + P E + Q+ G
Sbjct: 274 NGEMIKKIQN--DAGVRI---QFKPDDGISPERVAQVMG 307
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + +++GSIIGK GEIV + R E+ + I IS+ C ERIVT
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-------------- 70
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQ 161
VS +A+F I + +F ++ T I +R++VPA Q G +IGK G
Sbjct: 71 ---VSGTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGS 127
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 128 KIKEIRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G+ I E+R T SI++ + E +P E V ++GS + + + Q+ L
Sbjct: 125 SGSKIKEIRQTTGCSIQVAS-EMLPN---STERAVTLSGSAEQITQCIYQICL------- 173
Query: 425 EREGALAAHPP---VLPYVP 441
+ PP +PY P
Sbjct: 174 ----VMLESPPRGATIPYRP 189
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 129/301 (42%), Gaps = 81/301 (26%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSII K GE VK++R E+ + IS+ C ERI+T+ +
Sbjct: 4 KEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAGPT--------------- 46
Query: 113 AQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
+A+F+ I+ + S+ + + +R++VPA Q G +IGKGG I+ I
Sbjct: 47 --NAIFKAFAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEI 104
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH---- 222
R T AQ+++ D + S + + +AG P + + + QI + E S+ H
Sbjct: 105 RESTGAQVQVAGD----MLPNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPK 160
Query: 223 -------------LLL------------SSSSNIYQSSGVYLSAPLVG------------ 245
L++ S+S + + + L+ L G
Sbjct: 161 GLTITYRPKPSSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQLA 220
Query: 246 --------SYGN--YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
++GN +SA D ASA+ S L IG +IG+ G I +IRQ SGA I
Sbjct: 221 LQQSHFPMTHGNTGFSAGLD-ASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQI 279
Query: 296 K 296
K
Sbjct: 280 K 280
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 37/147 (25%)
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +I K G+ ++ +R E+ A+ I D + P + ++ +AG + KA I
Sbjct: 5 EVGSIIAKKGESVKKMREESGARTSI-SDGNCP------ERIITLAGPTNAIFKAFAMII 57
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+L E + S N +A AS +LRLV PA
Sbjct: 58 DKLEEG--------------------------ISSSMTNSTA----ASRPPVALRLVVPA 87
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 88 SQCGSLIGKGGCKIKEIRESTGAQVQV 114
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 1/110 (0%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +I K G +K++R+ESGA + + T F+ + I L
Sbjct: 6 VGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAGPTNAIFKAFA-MIIDKLEEGI 64
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
S + P + R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 65 SSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 114
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 177/444 (39%), Gaps = 90/444 (20%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ ++++ + + + G E+++TIY + E
Sbjct: 205 DFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPEN-- 262
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + V + + + D + +++L + IG +IGK G
Sbjct: 263 --------CSTACQKILEVMQQEASNTNRGD--------VPLKILAHNNLIGRIIGKSGN 306
Query: 162 VIQNI--RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ I +T+T+ + L D AL + ++ + G+P V +A ++++L ++
Sbjct: 307 TIKRIMEQTDTKITVSSLHDG----SALHLERVITIKGKPEGVCRAEQLVSAKLRQSYES 362
Query: 220 S------QHLLLSSSSNIYQSS----------------------------------GVYL 239
Q L+ + S G Y+
Sbjct: 363 DLAALAPQSLMFPGLHPMAMMSAYPPPPPPHGPPARPPHYRGGGGGGPYPHPPAVGGGYM 422
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-- 297
+ G G Y + RE + L P +G +IG GG I+ + SGASIKV
Sbjct: 423 GGAVHGPMGGYMSPSHGGVEREL-VCLYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQ 481
Query: 298 ---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERES--GDPVITTR-- 350
D + + + T E R Q K E G+P T R
Sbjct: 482 PNKDDPADAHERKVTIVGTPE----------CQWRAQSMIFNKVCYEGCMGNPDGTLRVE 531
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
I VPS Q+G +IG+GG + E++ TRA I+ L E+ + A +E V I G D S+
Sbjct: 532 IFVPSNQVGRIIGKGGQTVRELQRLTRALIK-LPEES--QNANTEETPVHILG--DFFST 586
Query: 411 ALSQVTLRLRANTFEREGALAAHP 434
+Q +R N + G +P
Sbjct: 587 HAAQRQIRALVNRNQMVGGQGPYP 610
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 12/187 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-DCIIFISTKEFFED 319
+F LR++ + +G +IG+ GG I+QI Q+S A + V G + +I I + +
Sbjct: 205 DFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITI-----YGN 259
Query: 320 PSPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P TA + L+ E + GD + +IL + IG +IG+ G I + T
Sbjct: 260 PENCSTACQKILEVMQQEASNTNRGD--VPLKILAHNNLIGRIIGKSGNTIKRIMEQTDT 317
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + + A E ++ I G + A V+ +LR + ALA + P
Sbjct: 318 KITVSSLHD--GSALHLERVITIKGKPEGVCRAEQLVSAKLRQSYESDLAALAPQSLMFP 375
Query: 439 YV-PMSL 444
+ PM++
Sbjct: 376 GLHPMAM 382
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 174/413 (42%), Gaps = 89/413 (21%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P +T++ ++ TV R + ++ G IIGKGG+ V LR ET +S+ V G +R
Sbjct: 33 PAPKTDEEYAQAQLTV-RAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDR 91
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--------- 140
++TI DA+ + + IVA L G TL
Sbjct: 92 VLTITGGC-----------------DAISKAY-AIVARALLE----GAPTLGMGGVVQSN 129
Query: 141 --ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
+++L+ +Q+G +IG+ G I++I+ + ++ KD + S + +++V G
Sbjct: 130 GTHPIKLLISHNQMGTIIGREGLKIKHIQDVSGVRMVAQKD----MLPQSNERVVEVQGT 185
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
P +++A+ +I L ++ R+ +L + + Q G AP + + G
Sbjct: 186 PEGIQRAVWEICKCLIDDWQRATGTVLYNPAVRTQPGG----APPLTTGG---------- 231
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
P N G G G + R +GA S+G ST +
Sbjct: 232 ----------PGYNSTGARGDYGSSPRVTRTGNGADF---SNG----------STPRLYN 268
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
S + AA R P T E+G+ + T I +P+ +GC+IGR G+ ISE+R A+ A
Sbjct: 269 RRSDS-DAANRGPP-----THDENGEEIQTQNISIPANMVGCIIGRAGSKISEIRKASGA 322
Query: 379 SIRILTNENVPKVAYED--EEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
I I K +++ E M I GS SAL + L A R A
Sbjct: 323 RISIA------KAPHDETGERMFTIMGSAKANESALFLLYENLEAEKIRRSQA 369
>gi|384254002|gb|EIE27476.1| hypothetical protein COCSUDRAFT_64249 [Coccomyxa subellipsoidea
C-169]
Length = 632
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 74/310 (23%)
Query: 11 KRTHFQSDAATNGGSKRR-------------NPG--DETE----QRGIGSEDTVYRYL-C 50
KR F A NGGSK NPG D + G+ ++ Y +
Sbjct: 194 KRASFSGPEAFNGGSKFSDAPGGFSDAAPAVNPGLADASNGGGVPSGMAAQGQFYETIDI 253
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IGKGGE +KQL+ T + ++I PG +++ ++ DS E V
Sbjct: 254 PAPMVGKLIGKGGETIKQLQYNTNTRVQIDHQTPGEAKKV----------SIQGDSHEAV 303
Query: 111 SPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
Q A +V + +DS A + + P +G +IG+GG+ I+ ++ +
Sbjct: 304 ---QAAKQQVEQIVSMDDSGAGG-------ASQSVECPQGIVGRIIGRGGETIRALQQAS 353
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
+A I + D++ P + ++G P V +A+ ++ + P +Q ++
Sbjct: 354 QAHIVV--DQNYP---EGEPRRVNISGRPDAVERAVKMVSELISGEPGSAQSII----QK 404
Query: 231 IYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQE 290
++ +GV + + CP G +G VIGKGG IK +++
Sbjct: 405 VHYGAGV-------------------------TREVQCPKGMVGRVIGKGGETIKALQKN 439
Query: 291 SGASIKVDSS 300
GA+I++D +
Sbjct: 440 FGANIQIDQT 449
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 113/275 (41%), Gaps = 60/275 (21%)
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+PA +G +IGKGG+ I+ ++ T +++I +H Q GE +K
Sbjct: 253 IPAPMVGKLIGKGGETIKQLQYNTNTRVQI---DH------------QTPGE---AKKVS 294
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
+Q S + ++ + Q + D++ A S +
Sbjct: 295 IQ---------GDSHEAVQAAKQQVEQIVSM-----------------DDSGAGGASQSV 328
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTK-EFFEDPSPTIT 325
CP G +G +IG+GG I+ ++Q S A I VD + EG+ + IS + + E ++
Sbjct: 329 ECPQGIVGRIIGRGGETIRALQQASQAHIVVDQNYPEGEPRRVNISGRPDAVERAVKMVS 388
Query: 326 AALRLQPRCS----EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
+ +P + +K +G +T + P +G +IG+GG I ++ A+I+
Sbjct: 389 ELISGEPGSAQSIIQKVHYGAG---VTREVQCPKGMVGRVIGKGGETIKALQKNFGANIQ 445
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
I D + I G SA + VT
Sbjct: 446 IDQT--------TDPMKITIAGQPPAVESAAAAVT 472
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 167/393 (42%), Gaps = 94/393 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI------------- 99
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
S D++ R + IVA+ L + G +++ +++L+ +Q+G +IG+
Sbjct: 100 ----SGGCDSISRAYS-IVAKALLEGAPQMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQ 154
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P ++KA+ +I L ++ +R
Sbjct: 155 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGNPEGIQKAIWEICKCLVDDWAR 210
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLV----GSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
+G L P+V G+ G S GN+GG
Sbjct: 211 G--------------TGTVLYNPMVRTQTGNSGGMSQ------------------GNVGG 238
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCS 335
G+ G + +R +GA F + + AA R P
Sbjct: 239 T-GREYGSSRVMRTGNGAD---------------FSESAPRSYNRRSESDAAQRGPP--- 279
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
T E+G+ + T I +P+ +GC+IGR G+ ISE+R + A I I K +++
Sbjct: 280 --THDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI------AKSPHDE 331
Query: 396 --EEMVQITGSLDVASSALSQVTLRLRANTFER 426
E M I G+ SAL + L A R
Sbjct: 332 TGERMFTIMGTAKANDSALYLLYENLEAEKQRR 364
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 71/295 (24%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTSAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL---- 223
T I++ E LP S + + ++G + + + QI + E+P R +
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRP 189
Query: 224 --------LLSSSS-------------------------------NIYQSSGVYLSAPLV 244
+L++ N + G+ +A L
Sbjct: 190 KPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALA 249
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
G+ + A++ + IG +IGKGG I +IRQ SGA I++ +
Sbjct: 250 ALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 304
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ E + ++RL+ +G +IGK G I+ + R+ESGA I + + +T
Sbjct: 16 KHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTT 75
Query: 314 KEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
F S + + CS+ + + G I R++VP++Q G LIG+ G+ I E+
Sbjct: 76 SAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 133 RQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 176/386 (45%), Gaps = 59/386 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG
Sbjct: 117 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEG-- 174
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + A+D+ +E I +++L + +G +IGK G+
Sbjct: 175 --------CSTACKIIMEIMQK-EAQDTKFTEE------IPLKILAHNNFVGRLIGKEGR 219
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G KA +I ++ E+
Sbjct: 220 NLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSIETCAKAEEEIMKKIRES--- 272
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF----------------S 263
++ + + + + G+ L+A +G + S+ + +
Sbjct: 273 YENDIAAMNLQAHLIPGLNLNA--LGLFPPSSSGIPPPAVSVASAAAAASYPPFGPESET 330
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDP 320
+ L PA +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 331 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PP 383
Query: 321 SPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A
Sbjct: 384 EAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAE 443
Query: 380 IRILTNENVPKVAYEDEEMVQITGSL 405
+ ++ + P D+ +V+ITG
Sbjct: 444 V-VVPRDQTPD--ENDQVVVKITGHF 466
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 28/228 (12%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLR 70
++ + A G +KR N G+E E + L P GSIIGKGG+ + QL+
Sbjct: 40 RKRPLDAPAEEAGCTKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQ 91
Query: 71 SETKSNIRISET---VPGCDERIVTIYSSSEGTN-----LFEDSGEFVSPAQDALFRVHD 122
ET + I++S++ PG ER+ I + E N + E E AQ
Sbjct: 92 KETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKP--EPVS 149
Query: 123 RIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEH 181
+ + ++ D + +++VP G +IGKGG ++ + ++ A +++ K E
Sbjct: 150 ILQPQTTVNPDRVKQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEG 204
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
+ L + ++ ++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 205 INLQ----ERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 248
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDC 307
R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C
Sbjct: 56 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 115
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQI 358
+I T E I +R P+ ++K E S D V +++VP++
Sbjct: 116 LIQ-GTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTA 174
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
G +IG+GGA + + + A +++ P+ E +V I+G
Sbjct: 175 GLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTISG 216
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 115/257 (44%), Gaps = 46/257 (17%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R ++ + I ISE C ERI TI S +G
Sbjct: 27 KEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGS---------TGAVFHA 75
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
F++ + + G ++ +T+R+++PA Q G +IGK G I+ IR
Sbjct: 76 VSMIAFKLDEDLCT----GPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRESP 131
Query: 171 RAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSS 228
I L L LS ++ V G+ V A V +L +P
Sbjct: 132 PKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHP----------- 180
Query: 229 SNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
V ++P V + SA + S++EF + P IG VIG+ G I +IR
Sbjct: 181 --------VPFASPSVVPGLDPSA---QTSSQEF----LVPNDLIGCVIGRQGSKISEIR 225
Query: 289 QESGASIKVDSSGAEGD 305
Q SGA IK+ + AEG
Sbjct: 226 QMSGAHIKIGNQ-AEGS 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 122/272 (44%), Gaps = 68/272 (25%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RM++ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G V A+ IA +L E+ L + N G +S P V
Sbjct: 62 ITTITGSTGAVFHAVSMIAFKLDED-------LCTGPPN-----GGSISKPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF--EDPSPTITAALRLQPRCSEKTERESGDPVI-----------------TTR 350
+S + F + T+T P K ++ SG PV +
Sbjct: 149 LLSANQGFSVQGQYGTVT------PAEVSKLQQLSGHPVPFASPSVVPGLDPSAQTSSQE 202
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
LVP+ IGC+IGR G+ ISE+R + A I+I
Sbjct: 203 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 10/143 (6%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
I R + P + GS+IGK G +K++R I P V + S+++
Sbjct: 97 ISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYH-PSLSLGTV-LLSANQ 154
Query: 99 GTNLFEDSGEF--VSPAQDALFRV---HDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
G F G++ V+PA+ + + H A S+ + LVP D IG
Sbjct: 155 G---FSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIG 211
Query: 154 CVIGKGGQVIQNIRTETRAQIRI 176
CVIG+ G I IR + A I+I
Sbjct: 212 CVIGRQGSKISEIRQMSGAHIKI 234
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 36/187 (19%)
Query: 35 EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVT 92
++R S+ R L P + GSIIGKGG + +LR+E +++ TVP C ERI+T
Sbjct: 14 QKRYKNSDGNEIRLLIPSKVAGSIIGKGGHNISKLRTEHNASV----TVPDCPGPERILT 69
Query: 93 IYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQI 152
+ + D + RV I+ +L D +I +RMLV Q
Sbjct: 70 VAAD-----------------LDTMLRVVSEILP--NLED-------VIDIRMLVHQSQA 103
Query: 153 GCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASR 212
GC+IGKGG I+ +R +T A+I+I + C S D ++Q+ G+ + A+ +
Sbjct: 104 GCIIGKGGLKIKELREKTGARIKIYSN----CCPQSTDRIVQINGKGNLCVDAIRECMEL 159
Query: 213 LHENPSR 219
L +P +
Sbjct: 160 LKTSPIK 166
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP- 322
+RL+ P+ G +IGKGG I ++R E AS+ V DC P P
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVP-------DC------------PGPE 65
Query: 323 ---TITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
T+ A L R + D VI R+LV +Q GC+IG+GG I E+R T A
Sbjct: 66 RILTVAADLDTMLRVVSEILPNLED-VIDIRMLVHQSQAGCIIGKGGLKIKELREKTGAR 124
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFE 425
I+I +N + +VQI G ++ A+ + L+ + +
Sbjct: 125 IKIYSN----CCPQSTDRIVQINGKGNLCVDAIRECMELLKTSPIK 166
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
+G E + P G+IIGKGG ++++R E+ + I I E +PG ++RI+TI
Sbjct: 286 LGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITI 340
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
+ ++ +P D G +IGKGG I+ IR E+ A I I DE LP S D ++ ++G P
Sbjct: 292 STQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITI--DEPLP---GSNDRIITISGTPNQ 346
Query: 202 VRKALVQIASRL 213
++ A + RL
Sbjct: 347 IQMAQYLLQQRL 358
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
S ++ P G +IGKGG I++IR ESGA+I +D +D II IS
Sbjct: 292 STQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITIS 341
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 59/391 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 174 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 229
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 230 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 276
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
I +T +I I L+D L + + + V G KA +I ++ E+
Sbjct: 277 IEQDTDTKITISPLQD----LTLYNPERTITVKGSIEACAKAEEEIMKKIRESYENDIAA 332
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA---------REFSLRLV 267
+ HL+ + N + G++ + + S ++ L
Sbjct: 333 MNLQAHLIPGLNLN---ALGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQQPESETVHLF 389
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTI 324
PA +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 IPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQF 442
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 443 KAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VV 501
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P D+ +V+ITG +S L+Q
Sbjct: 502 PRDQTPD--ENDQVVVKITGHF--YASQLAQ 528
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
+ +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 171 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 211
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 178/412 (43%), Gaps = 66/412 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGT 100
++ R L P + +G+IIGK G +K + +T+S + I + G E+ +TI+SS EG
Sbjct: 27 QELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHSSKEG- 85
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
S A + + ++ + + ++ + +++L +G +IGK G
Sbjct: 86 ---------CSQACRMILEIMEKEANDTKIVEE-------VPLKILAHNSLVGRLIGKEG 129
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HE 215
+ ++ I +T +I I L+D L + + + V G KA +I +L HE
Sbjct: 130 RNLKKIEQDTGTKITISALQD----LTVYNQERTISVRGGVEECCKAEGEIMKKLREAHE 185
Query: 216 N--PSRSQHLLLSSSSNIYQ----SSGVYLSAPLVGSYG------NYSA----------- 252
N S +Q + + N+ SSG+ + P G G NYS
Sbjct: 186 NDVASVNQQTNMMAGLNLSALGIFSSGMSVLPPASGLRGSLSTPANYSPLLGPSIMGGLY 245
Query: 253 --------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+A + + L P +G +IGK G IK++ +GASIK+ + +
Sbjct: 246 GVPSSGALSLQQAGGEQEVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPD 305
Query: 305 DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIG 363
+ + I T P A R+ + E+ + + V + I VPS G +IG
Sbjct: 306 EPERMVIITG----PPEAQFKAQGRIYGKLKEENFFTAKEEVKLEAHIKVPSTAAGRVIG 361
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+GG ++E+++ T A + I+ + P D+ V+I G + +A ++
Sbjct: 362 KGGKTVNELQNLTSAEV-IVPRDQTPD--ENDDVFVKIIGHFFASQTAQRKI 410
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 36 QRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIY 94
Q+ G ++ VY ++ P +G++IGK G+ +K+L ++I+I+ P ER+V I
Sbjct: 256 QQAGGEQEVVYLFI-PTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIIT 314
Query: 95 SSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGC 154
E F+ G R++ ++ E+ E E+ L + VP+ G
Sbjct: 315 GPPEAQ--FKAQG-----------RIYGKLKEENFFTAKE--EVKL-EAHIKVPSTAAGR 358
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDE 180
VIGKGG+ + ++ T A++ + +D+
Sbjct: 359 VIGKGGKTVNELQNLTSAEVIVPRDQ 384
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEF 316
+E LR++ P +G +IGK G IK I +++ + + + +++GA + I S+KE
Sbjct: 27 QELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAT-EKAITIHSSKE- 84
Query: 317 FEDPSPTITAALRLQPRCSEKTERESGDPVIT----TRILVPSAQIGCLIGRGGAIISEM 372
+ A R+ E E+E+ D I +IL ++ +G LIG+ G + ++
Sbjct: 85 ------GCSQACRM---ILEIMEKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKI 135
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T I I +++ Y E + + G ++ A ++ +LR
Sbjct: 136 EQDTGTKITISALQDL--TVYNQERTISVRGGVEECCKAEGEIMKKLR 181
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R++VPA Q G +IGKGG I+ IR T AQ+++ D LP S + + +AG P
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGIPQ 71
Query: 201 VVRKALVQIASRLHENPSRSQHLLL---SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
+ + + QI + E+P + + SSS + + G Y G + +A
Sbjct: 72 SIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYT------IQGQAIPQPIDA 125
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
SA+ S L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 126 SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 165
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD----------- 305
+S +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 11 SSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIP 70
Query: 306 ----DCIIFISTKEFFEDPSPTITAALRLQPRCSE---------------KTERESGDPV 346
+C+ I E P +T R +P S ++
Sbjct: 71 QSIIECVKQICVV-MLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDASAQT 129
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+ + +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS
Sbjct: 130 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGS-- 182
Query: 407 VASSALSQVTLRLR 420
AS +L+Q + +R
Sbjct: 183 TASISLAQYLINVR 196
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 46 TKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 97
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADDEF 135
PG ER+ I + E N D F++ P + + ++ D
Sbjct: 98 FYPGTTERVCLIQGTVEALNGVHD---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRV 154
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQ 194
+ +++VP G +IGKGG ++ + ++ A +++ K E + L + ++
Sbjct: 155 KQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVT 205
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 206 ISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 240
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDC 307
R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C
Sbjct: 48 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQI 358
+I T E I +R P+ ++KTE S D V +++VP++
Sbjct: 108 LIQ-GTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTA 166
Query: 359 GCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 167 GLIIGKGGATVKAVMEQSGAWVQL 190
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 138/304 (45%), Gaps = 58/304 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 68
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 69 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 123
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 124 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 179
Query: 220 SQHLLLS--------SSSNIYQS--------------------SGVYLSAPL--VGSY-- 247
S L +S ++SN S SG+ A L VG++
Sbjct: 180 SSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPA 239
Query: 248 ----------GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
G +A + A + + + + P +G ++GKGG + + ++ +GA I++
Sbjct: 240 XXXXXAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 299
Query: 298 DSSG 301
G
Sbjct: 300 SKKG 303
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 64
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 65 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 119
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 120 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 174
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + + T T +LQ S + DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 46/262 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
IR I L L LS ++ V G+ V V ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEV----------TKLQQ 175
Query: 223 LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
L S V + P V + + S++EF + P IG VIG+ G
Sbjct: 176 L---------SSHAVPFATPSVVPGLDPG---TQTSSQEF----LVPNDLIGCVIGRQGS 219
Query: 283 IIKQIRQESGASIKVDSSGAEG 304
I +IRQ SGA IK+ + AEG
Sbjct: 220 KISEIRQMSGAHIKIGNQ-AEG 240
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 178/400 (44%), Gaps = 65/400 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG-- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 253 --------CSAACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ + TET+ I L+D L + + + V G KA +I ++ +EN
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGSIENCCKAEQEIMKKVREAYEN 353
Query: 217 P----SRSQHL----------LLSSSSNIY--QSSGVYLSAPLVGSYGNYSARRDEASAR 260
S HL L +SSN S V +AP Y ++ E
Sbjct: 354 DVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAP----YSSFMPPEQE---- 405
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
++ + PA +G +IGK G IKQ+ + + ASIK+ + + T P
Sbjct: 406 --TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----PP 459
Query: 321 SPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A
Sbjct: 460 EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAE 519
Query: 380 IRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
+ ++ + P E+E+ +V+I G +S ++Q +R
Sbjct: 520 V-VVPRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 553
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++TV+ ++ P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 QETVHVFI-PAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 462
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 463 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 506
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 507 KTVNELQNLTAAEVVVPRDQ 526
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 41 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 96
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + +PA
Sbjct: 97 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQEIP--IPAS 144
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 145 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 201
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 202 EIIREK----------------------DQADFRGVRGDFSSRMGGG-----SIEVSVPR 234
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 235 FAVGIVIGRNGEMIKKIQNDAGVRIQ 260
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G TV P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 121 RNGPGFHNDVDG---NSTVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 177
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 178 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFSSRMGGGSI 228
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 229 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 283
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I+ + R L+ + + G + VG+ G
Sbjct: 284 HAAHVISELILTAQERDGFGGLAVARGRGRGRGDWS----VGTPGGIQ-----------E 328
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 329 VTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFT 378
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 49 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 100
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P G ++
Sbjct: 101 GTPESIEQAKRLLGQIVDRCRNGP------------------------------GFHNDV 130
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ +E + PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 131 DGNSTVQEIPI----PASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 186
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLIG 363
+ F + + +R + + + R GD ++R + VP +G +IG
Sbjct: 187 TGDPFKVQQAREMVLEIIREKDQADFRGVR--GD--FSSRMGGGSIEVSVPRFAVGIVIG 242
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G +I ++++ I+ ++ + E Q+ G D A + V L
Sbjct: 243 RNGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVISELILTA 296
Query: 424 FEREG 428
ER+G
Sbjct: 297 QERDG 301
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFSSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 XGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRSDFSSRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I + R LS + + G + VG+ G
Sbjct: 312 HAAHFINELILTAQERDGFGGLSVARGRGRGRGDWS----VGTPGGVQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 119/304 (39%), Gaps = 66/304 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ + R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---SIEVSVPRFAVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E Q+ G D A + L
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHAAHFIN-ELILTAQ 325
Query: 425 EREG 428
ER+G
Sbjct: 326 ERDG 329
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 85/178 (47%), Gaps = 28/178 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + +++GSIIGK GEIV + R E+ + I IS+ C ERIVT
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-------------- 70
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQ 161
VS +A+F I + +F ++ T I +R++VPA Q G +IGK G
Sbjct: 71 ---VSGTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGS 127
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 128 KIKEIRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSVT-LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ + E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQVAS-EMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 117/261 (44%), Gaps = 40/261 (15%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGK G+ V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 83 IIGKAGKHVNEIREKSGARVMVSESIPGNPERILNV------------SGPL-----DAV 125
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F ++ +T++ ++P ++G VIG+GG I+ I+ + A
Sbjct: 126 SKSFGLIVRR--INDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGA 183
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + +L V+G + A + + L E R H SSS++ Y
Sbjct: 184 KLNASEG----MLPGSTERILSVSGVADAIHIATYYVGNILIEAAERQPH---SSSTSTY 236
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREF---------SLRLVCPAGNIGGVIGKGGGI 283
+ SG P YS + ++ P +G +IGKGG
Sbjct: 237 RPSGTSSRGPRYAPTPTYSGYYGYPPPPAPAPYPPGPPQTQQIYIPNDLVGCIIGKGGSK 296
Query: 284 IKQIRQESGASIKVDSSGAEG 304
I +IR S + I++ G +G
Sbjct: 297 INEIRSLSASQIRIMEPGVQG 317
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 128/324 (39%), Gaps = 85/324 (26%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGK G+ + IR ++ A R++ E +P + + +L V+G
Sbjct: 69 IHMRCLIVTQDASIIIGKAGKHVNEIREKSGA--RVMVSESIPG---NPERILNVSGPLD 123
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V K+ I R+++ P P V +R
Sbjct: 124 AVSKSFGLIVRRINDEP---------------------FDTPSV------------PGSR 150
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF--------IS 312
+++ + P +G VIG+GG IK+I+ SGA + G I I
Sbjct: 151 AVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVADAIH 210
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGD----------PVI--------------- 347
++ + I AA R S T R SG P
Sbjct: 211 IATYYVG-NILIEAAERQPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPPPPAPAPY 269
Query: 348 ------TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN--ENVPKVAY--EDEE 397
T +I +P+ +GC+IG+GG+ I+E+RS + + IRI+ + P A +E
Sbjct: 270 PPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGNPNER 329
Query: 398 MVQITG---SLDVASSALSQVTLR 418
+V ITG ++ +A + L V+ R
Sbjct: 330 LVIITGQPQNIQMAVNLLYHVSFR 353
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IG+GG +K+++ + + + SE +PG ERI+++ ++
Sbjct: 148 GSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVAD 207
Query: 99 ---------GTNLFEDSGEFVSPAQDALFRVH------DRIVAEDSLADDEFGELTLI-- 141
G L E + + + +R R + +
Sbjct: 208 AIHIATYYVGNILIEAAERQPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPPPPAPA 267
Query: 142 --------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
T ++ +P D +GC+IGKGG I IR+ + +QIRI++
Sbjct: 268 PYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIME 312
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
A + +R + + +IGK G + +IR++SGA + V S + I+ +S +
Sbjct: 66 AAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGP--LD 123
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
S + +R T G +T + ++P +++G +IGRGG+ I E++ A+ A
Sbjct: 124 AVSKSFGLIVRRINDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGA 183
Query: 379 SI 380
+
Sbjct: 184 KL 185
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + +PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQEIP--IPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 230 EIIREK----------------------DQADFRGVRGDFSSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G TV P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHNDVDG---NSTVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFSSRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I+ + R L+ + + G + VG+ G
Sbjct: 312 HAAHVISELILTAQERDGFGGLAVARGRGRGRGDWS----VGTPGGIQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 VTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFT 406
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P G ++
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGP------------------------------GFHNDV 158
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ +E + PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 159 DGNSTVQEIPI----PASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLIG 363
+ F + + +R + + + R GD ++R + VP +G +IG
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVR--GD--FSSRMGGGSIEVSVPRFAVGIVIG 270
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G +I ++++ I+ ++ + E Q+ G D A + V L
Sbjct: 271 RNGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHVISELILTA 324
Query: 424 FEREG 428
ER+G
Sbjct: 325 QERDG 329
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 38/178 (21%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ +
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPT--------------- 66
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----------TLITVRMLVPADQIGCVIGKGGQ 161
+A+F+ I + +EF EL IT+R++VPA Q G +IGKGG
Sbjct: 67 --NAIFKAFSLICKKF----EEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGS 120
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T A I++ E LP S + + ++G + + + I + E+P +
Sbjct: 121 KIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTSEAITQCIYHICCVMLESPPK 174
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 94/191 (49%), Gaps = 34/191 (17%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+K+ R+ESGA K++ S + I+ ++ P+
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGA--KINISDGSCPERIVTVT------GPT 66
Query: 322 PTITAALRL-QPRCSEKTERESG-------DPVITTRILVPSAQIGCLIGRGGAIISEMR 373
I A L + E E +SG P IT R++VP++Q G LIG+GG+ I E+R
Sbjct: 67 NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIR 126
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAH 433
T ASI++ +E +P E V I+G+ S A++Q + E
Sbjct: 127 EVTGASIQV-ASEMLPN---STERAVTISGT----SEAITQCIYHICCVMLE-------S 171
Query: 434 PP---VLPYVP 441
PP +PY P
Sbjct: 172 PPKGATIPYRP 182
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSS 96
GI R + P + GS+IGKGG +K++R T ++I++ SE +P ER VTI +
Sbjct: 94 GIPKPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGT 153
Query: 97 SEG 99
SE
Sbjct: 154 SEA 156
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFI 311
+R + RL+ + N GGVIGKGG IK++R + A + + D +G E II I
Sbjct: 26 KRPRGDYNQIIFRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDCNGPE---RIIKI 82
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISE 371
T+ I + P EK + RI+V + G +IGR G I E
Sbjct: 83 GTRNV----DNAIDCIKDIIPSVGEKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKE 138
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALA 431
+R T A ++ T E PK + +VQ+TGS DV + A +V +E A
Sbjct: 139 LREKTGAHFKVYT-ETCPKST---DRVVQLTGSPDVIAKAAREV--------YEICTETA 186
Query: 432 AHPPVLPYVPMSLDITDGSKYG 453
PV Y P D+ ++YG
Sbjct: 187 VKGPVQDYDPFCHDLDFYNQYG 208
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSSSEGTNL 102
++R + G +IGKGGE +K+LR + + + ++P C+ ERI+ I GT
Sbjct: 36 IFRLMIRSINAGGVIGKGGENIKRLRVDYDAKV----SIPDCNGPERIIKI-----GTRN 86
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+++ + +D + V ++ ++D ++ F +R++V G +IG+ G
Sbjct: 87 VDNA---IDCIKDIIPSVGEKKHSQDQ-QNNSF-------IRIMVHQSHAGAIIGRAGFK 135
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR--- 219
I+ +R +T A ++ + C S D ++Q+ G P V+ KA ++ E +
Sbjct: 136 IKELREKTGAHFKV----YTETCPKSTDRVVQLTGSPDVIAKAAREVYEICTETAVKGPV 191
Query: 220 SQHLLLSSSSNIYQSSGVYLSAP 242
+ + Y G YL P
Sbjct: 192 QDYDPFCHDLDFYNQYGGYLFDP 214
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIG+GG+ +K++R ++ + I+I + + G +RI+TI
Sbjct: 381 GSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITI 418
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 177/418 (42%), Gaps = 85/418 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R + P + +G+IIGK G +K + +T+S + I + G E+ +TI+S+ EG
Sbjct: 200 RIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEG------ 253
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
S A + + + E +D I ++++ + IG +IGK G+ ++
Sbjct: 254 ----CSAACRMIMEIMQKEANETKAMED-------IPLKIIASNNYIGRLIGKQGRNLKK 302
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-----PS 218
I ET +I I L+D L + + + V G A V+I +L E +
Sbjct: 303 IEEETGTKITISSLQD----LNIYNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAA 358
Query: 219 RSQHLLLSSSSN-----IYQSSGVYLS--------APLVGSYG----------------- 248
+Q L N I+ S+ LS P VG G
Sbjct: 359 INQQTSLIPGLNLNALGIFSSTLPVLSPAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGV 418
Query: 249 -NYSARRDEASAREFSLR-LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
SA + +A+E + L P +G +IGK G IKQ+ +GASIKV + AE D
Sbjct: 419 PPASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKV--APAEMPD 476
Query: 307 C----IIFISTKEFFEDPSPTITAALRLQPRCSEKTERES-----GDPVITTRILVPSAQ 357
+I T E A + Q R K + E+ + + T I VPS
Sbjct: 477 ATERMVIITGTPE----------AQFKAQGRIFGKLKEENIFTGKEEVRLETHIKVPSTA 526
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
G +IG+GG ++E++S T A + I+ + P ++E +V+I G +A ++
Sbjct: 527 AGRVIGKGGKTVNELQSLTSAEV-IVPRDQTPD--EKNEVVVKICGHFFANQTAQRKI 581
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDE 88
P + E V P + +G++IGK G+ +KQL ++I+++ +P E
Sbjct: 420 PASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATE 479
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
R+V I + E F+ G R+ ++ E+ E E+ L T + VP
Sbjct: 480 RMVIITGTPEAQ--FKAQG-----------RIFGKLKEENIFTGKE--EVRLET-HIKVP 523
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDE 180
+ G VIGKGG+ + +++ T A++ + +D+
Sbjct: 524 STAAGRVIGKGGKTVNELQSLTSAEVIVPRDQ 555
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSG 301
G G + A R + LR++ P +G +IGK G IK + +++ + + + +++G
Sbjct: 184 GPSGEFGAPR----TTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAG 239
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERES-GDPVITTRILVPSAQIGC 360
A + I ST E +AA R+ +K E+ I +I+ + IG
Sbjct: 240 A-AEKPITIHSTPE-------GCSAACRMIMEIMQKEANETKAMEDIPLKIIASNNYIGR 291
Query: 361 LIGRGGAIIS--EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
LIG+ G + E + T+ +I L + N+ Y +E + + GSL+ +A ++ +
Sbjct: 292 LIGKQGRNLKKIEEETGTKITISSLQDLNI----YNNERTITVKGSLEACCNAEVEIMKK 347
Query: 419 LR 420
LR
Sbjct: 348 LR 349
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 156/376 (41%), Gaps = 72/376 (19%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ Y P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 70 GALVHQRAVMTEE----YKVPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPERP 125
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 126 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDMDGNSTVQEI--LIPAS 173
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 174 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQARDLVL 230
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 231 EIIREKD----------------------QADFRGIRSDFSSRIGGG-----SVEVSVPR 263
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G +IG+ G +IK+I+ ++G I+ DD I + P AA +
Sbjct: 264 FAVGIIIGRNGEMIKKIQNDAGVRIQFKP-----DDGISPERAAQVMGLPDLCQHAAHII 318
Query: 331 QPRCSEKTERES--------------GDPVITT-------RILVPSAQIGCLIGRGGAII 369
ER+ GD ++T VP+ + G +IG+GG I
Sbjct: 319 NELILTAQERDGFGALALARGRGRSRGDWNLSTPGSMQEITYTVPADKCGLVIGKGGENI 378
Query: 370 SEMRSATRASIRILTN 385
+ + A + + N
Sbjct: 379 KNINQQSGAHVELQRN 394
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 119/291 (40%), Gaps = 37/291 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G TV L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 150 RNGPGFHNDMDG---NSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLP 206
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + + E + A FR + D + +V
Sbjct: 207 TGADKPLRITGDPFKVQQARDLVLEIIREKDQADFR---------GIRSDFSSRIGGGSV 257
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G +IG+ G++I+ I+ + +I+ D+ +S + QV G P + +
Sbjct: 258 EVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGLPDLCQ 312
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVY-LSAPLVGSYGNYSARRDEASAREF 262
A I + R L+ + +S G + LS P S +E
Sbjct: 313 HAAHIINELILTAQERDGFGALALARGRGRSRGDWNLSTP--------------GSMQEI 358
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 359 TY--TVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPGVRIFT 407
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 143/361 (39%), Gaps = 67/361 (18%)
Query: 88 ERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITV 143
R+ I + +G +SG V + + V R + D ++ G L ++T
Sbjct: 25 HRVRQIAAKIDGIPHLNNSGPLVDTSLYG-YGVQKRPL--DDPVGNQLGALVHQRAVMTE 81
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPA 200
VP +G +IG+GG+ I I+TE+ +I+I D +P C L+ G P
Sbjct: 82 EYKVPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPERPCVLT--------GTPE 133
Query: 201 VVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
+ +A L QI R P H + +S + +
Sbjct: 134 SIEQAKRLLGQIVDRCRNGPGF--HNDMDGNSTVQE------------------------ 167
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFISTKE 315
++ PA +G VIGKGG IKQ+++ +G + + G G D + I+
Sbjct: 168 --------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDP 219
Query: 316 F-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISE 371
F + + +R + + + R I + + VP +G +IGR G +I +
Sbjct: 220 FKVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGGSVEVSVPRFAVGIIIGRNGEMIKK 279
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT-LRLRANTFEREGAL 430
+++ A +RI + P E Q+ G D+ A + L L A + GAL
Sbjct: 280 IQN--DAGVRI---QFKPDDGISPERAAQVMGLPDLCQHAAHIINELILTAQERDGFGAL 334
Query: 431 A 431
A
Sbjct: 335 A 335
>gi|328711755|ref|XP_001946091.2| PREDICTED: hypothetical protein LOC100167988 [Acyrthosiphon pisum]
Length = 1425
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 171/384 (44%), Gaps = 42/384 (10%)
Query: 49 LCPLRK---IGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGTNLFE 104
LC L +G IIG+GG +K++ +T + I ++++ + G + + IY + E
Sbjct: 210 LCILVHSDIVGVIIGRGGSTIKEIIEQTSARIIVNKSDIVGSLGKPIAIYGTPENC---- 265
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
+ + L VH ++ + + + +R+L+ + IG +IG+ G I+
Sbjct: 266 -----TNACRKILEVVHQKVT---------YTNKSNVILRILIQDNLIGLIIGEEGNTIR 311
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-----PSR 219
NI +ET +I + K ++ + +++ + V G + KA QI+++L ++ P
Sbjct: 312 NIVSETETKINVFKINNITIDDINYKSVCAVEGSIENISKAESQISTKLRQSFEKYLPDV 371
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY--GNYSARRDEASAREFSLRLVCPAGNIGGVI 277
+ H+ L S + S + + P + G R++ + E L ++ + + +I
Sbjct: 372 AIHVELVSEMRNF--SKMEMGLPNFSNCVPGAIPVIRNKQT--ESMLCILVHSDMVHAII 427
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE-DPSPTITAALRLQPRCSE 336
G G IK I Q++ + V + D + I + +P A L++ E
Sbjct: 428 GNCGSKIKAITQQTSTWVHV-----QPKDNFVNIEQAIIIKGNPEKCTNACLKMLEVFQE 482
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
T S D ++ +IL+P IG +I G I ++ S T I + + + ++
Sbjct: 483 -TNTCSSDVIL--KILIPDNLIGIIIEEEGYTIKKIMSETETKISVSSITGITIDSFNYN 539
Query: 397 EMVQITGSLDVASSALSQVTLRLR 420
+ + G ++ S A Q++ +LR
Sbjct: 540 RICMVEGLIENISKAEGQISAKLR 563
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 51/372 (13%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIG+ +K++ +T I ++E + G E+ +TIY + E + + L
Sbjct: 43 IIGRCDSTIKEIMEQTSVRINVNE-IFGNLEKAITIYGTPENCTI---------ACRKIL 92
Query: 118 FRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
V + + + + + +++L+ ++IG IG+ +I+NI +ET +I +
Sbjct: 93 EVVQQKAI---------YTNKSDVILKILIHENRIGLAIGEEDNIIRNIMSETETKINVY 143
Query: 178 KDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGV 237
+ + + +++ + V G V KA QI++++ +S L +N S
Sbjct: 144 SNVDITINNINYKSICTVEGSIENVSKAESQISAKI----GQSLEKYLQPMANCVPS--- 196
Query: 238 YLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ P++ R++ + E L ++ + +G +IG+GG IK+I +++ A I V
Sbjct: 197 --AIPVI---------RNKQT--ESMLCILVHSDIVGVIIGRGGSTIKEIIEQTSARIIV 243
Query: 298 DSS---GAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVP 354
+ S G+ G I+ + P A ++ +K + VI RIL+
Sbjct: 244 NKSDIVGSLGKPIAIYGT-------PENCTNACRKILEVVHQKVTYTNKSNVI-LRILIQ 295
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
IG +IG G I + S T I + N+ + + + GS++ S A SQ
Sbjct: 296 DNLIGLIIGEEGNTIRNIVSETETKINVFKINNITIDDINYKSVCAVEGSIENISKAESQ 355
Query: 415 VTLRLRANTFER 426
++ +LR +FE+
Sbjct: 356 ISTKLRQ-SFEK 366
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+ +++L+P + IG +I + G I+ I +ET +I + + + + +++ + V G
Sbjct: 490 VILKILIPDNLIGIIIEEEGYTIKKIMSETETKISVSSITGITIDSFNYNRICMVEGLIE 549
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL------------VGSYG 248
+ KA QI+++L ++ +H L QS V + L V G
Sbjct: 550 NISKAEGQISAKLRQSI---EHFL--------QSVDVKVEPALEMRNLCEIGLTRVSHVG 598
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
+ E REF+LR++ + I +IGK G IK+I Q++ A I VD +
Sbjct: 599 PKTIPAIEN--REFTLRILVQSNMISVIIGKRGSTIKEITQQTSARIHVDQKDSVS---- 652
Query: 309 IFISTKEFFE---DPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRG 365
ST++ P A ++ +K + + + +ILV +IG +IG+
Sbjct: 653 ---STEKAITIRGIPENCTNACRKILDVMQKKNAATTYNSDVILKILVHDNRIGAIIGQE 709
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ ++ S T +I + + ++ ++ +E + + GS++ S A +Q++ +LR
Sbjct: 710 RNTVRKIMSETDTNIIVPSITDITIDSFNNERIFTVEGSVENISKAEAQMSAKLR 764
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 63/308 (20%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSE 98
+ V + L P GSIIGKGG+++ L++++K+ IR+S +T PG ER++ I S
Sbjct: 20 DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIA 79
Query: 99 GTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
G F+ L +V + A+ ++ + ++M+VP G +IGK
Sbjct: 80 G---VRQVNRFI------LEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGK 130
Query: 159 GGQVIQNIRTETRAQIRILK-------DEHLPLCALSFDELLQVAGEPAVVRKALVQI-- 209
GG I+ I+ ++ A +++ + DE + F+E L A E ++ K L I
Sbjct: 131 GGSNIKEIQDKSGAHVQVSQKKAQYAIDERILTVTGEFNERL-TAWE-LIIWKCLEDINN 188
Query: 210 -----ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPL---VGSYGNYSARR------- 254
S H P+ + L S+ Y G P+ SY Y++ R
Sbjct: 189 LPNTSVSYSHVEPAGTLPALHSN----YYGGGNANDRPMDSSAASYDPYTSERYSPTQVT 244
Query: 255 -DEASAREFSL--------------------RLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
D + R++ + ++ P IG ++GK G +I I+ SGA
Sbjct: 245 QDAQADRQYGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGA 304
Query: 294 SIKVDSSG 301
I+V G
Sbjct: 305 HIQVSQRG 312
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+D +S + L+L+ P G +IGKGG +I ++ +S I++ + +D F T
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRL----SHNNDT--FPGT 67
Query: 314 KEFFEDPSPTITAALRLQPRCSEKTERE-SGDPVI-----------TTRILVPSAQIGCL 361
KE + +I ++ EK E D I +++VP+A G +
Sbjct: 68 KERVIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVI 127
Query: 362 IGRGGAIISEMRSATRASIRILTNENVPKVAYE-DEEMVQITGSLDVASSALSQVTLR 418
IG+GG+ I E++ + A +++ + K Y DE ++ +TG + +A + +
Sbjct: 128 IGKGGSNIKEIQDKSGAHVQV----SQKKAQYAIDERILTVTGEFNERLTAWELIIWK 181
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 32/178 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + +++GSIIGK GEIV + R E+ + I IS+ C ERIVT
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-------------- 70
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQ 161
VS +A+F I + +EF ++ T I +R++VPA Q G +IGK G
Sbjct: 71 ---VSGTTNAIFSAFTLITKKF----EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGS 123
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 124 KIKEIRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 177
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER--ESGDPVITTRILVPSAQIGCLIG 363
+ +T F +A L + E+ + G I R++VP++Q G LIG
Sbjct: 68 IVTVSGTTNAIF--------SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIG 119
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
+ G+ I E+R T SI++ + E +P E V ++GS + + + Q+ L
Sbjct: 120 KSGSKIKEIRQTTGCSIQVAS-EMLPN---STERAVTLSGSAEQITQCIYQICL------ 169
Query: 424 FEREGALAAHPP---VLPYVP 441
+ PP +PY P
Sbjct: 170 -----VMLESPPRGATIPYRP 185
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 98 E 98
E
Sbjct: 158 E 158
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 166/402 (41%), Gaps = 69/402 (17%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R LC + + +++GKGGE +K+++ + + I +S+ + G ER++++ +
Sbjct: 158 FRMLCTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVRGPA-------- 209
Query: 106 SGEFVSPAQDALFRVH--DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E+V+ A + R+ + + SL ++ +R+L P +G +IGK G
Sbjct: 210 --EYVAKAFGLIVRMQLGEPLNVPSSLESQQY------NLRLLFPHTIMGYIIGKKGSRF 261
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ I + A ++ D+ LP S D +L + G + A IA + E+ +
Sbjct: 262 REIEESSAAALK-ANDQILP---ASTDRVLNINGVADAIHIATYYIAQTVIEHKQQMSKA 317
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLV------------CPAG 271
+ + +N Q + PLV S SAR F R++ P
Sbjct: 318 IYYNPANFAQP-----TIPLVNS-----------SARRFQHRMMGDFRGGRMGRQFGPQP 361
Query: 272 NIGGVIG---KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE-------FFEDPS 321
G ++G + G+ Q+ + A+ + SG +G + I + F +
Sbjct: 362 GFGPMMGMPSQMMGMYGQMSPQGNANGQSPESG-DGQSNMGRIPGGKPPQMGGYFPPQYA 420
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
P A + +T D + I VP IG +IGRGG + ++R T ++
Sbjct: 421 PQFNPAA-VASNTRAETVTTGADGKLNQDIFVPQKHIGLIIGRGGRNLKDIRQQTGCYVK 479
Query: 382 ILTNENVP-----KVAYEDEEMVQITGSLDVASSALSQVTLR 418
I N+ VP K+ M I +L + ++ + +R
Sbjct: 480 I--NDEVPGSTERKLTLMSNNMYGIQNALLLINNKIENEKMR 519
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 182/424 (42%), Gaps = 84/424 (19%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G +K L +T+S + I + G E+ +TI+++ EG +
Sbjct: 116 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 175
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
+A + D + E DE + +++L +G +IGK G+
Sbjct: 176 -------------EACRMILDIMQKEA----DETKSAEEVPLKILAHNSLVGRLIGKEGR 218
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ I +T +I I L+D L + + + V G A V+I +L E
Sbjct: 219 NLKKIEQDTGTKITISPLQD----LTIYNPERTITVKGSTEACSNAEVEIMKKLREA-YE 273
Query: 220 SQHLLLSSSSNIYQ----------SSGVYLSAPLVGSYGNYSA------------RRDEA 257
+ + ++ +N+ S+G+ + G+ G +A RR +
Sbjct: 274 NDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTPGARGAAAATPYHPFAQQSGRRRTGS 333
Query: 258 SAREFSL---------------------RLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
SA SL L P +G +IGK G IKQ+ + +GASIK
Sbjct: 334 SAYLSSLYGAPPAGAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIK 393
Query: 297 VDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRIL 352
+ + AEG D ++ I+ P A R+ + E+ + V + I
Sbjct: 394 I--APAEGPDASERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIK 446
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGSLDVASSA 411
VPS G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G + +A
Sbjct: 447 VPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVVVKIIGHFFASQTA 502
Query: 412 LSQV 415
++
Sbjct: 503 QRKI 506
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETV-PGCDERIVTIYSSSEGT 100
E V P + +G+IIGK G+ +KQL ++I+I+ P ER+V I E
Sbjct: 357 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPE-- 414
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLITVRMLVPADQIGCVIG 157
A F+ RI + L ++ F E + + VP+ G VIG
Sbjct: 415 ---------------AQFKAQGRIFGK--LKEENFFNPKEEVKLEAHIKVPSFAAGRVIG 457
Query: 158 KGGQVIQNIRTETRAQIRILKDE 180
KGG+ + ++ T A++ + +D+
Sbjct: 458 KGGKTVNELQNLTSAEVIVPRDQ 480
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 12/163 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFISTKEFF 317
+F LR++ P +G +IGK G IK + +++ + + + +++GA + I +T E
Sbjct: 116 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGA-AEKPITIHATPEGC 174
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ I ++ E E +S + V +IL ++ +G LIG+ G + ++ T
Sbjct: 175 SEACRMILDIMQ-----KEADETKSAEEV-PLKILAHNSLVGRLIGKEGRNLKKIEQDTG 228
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
I I +++ Y E + + GS + S+A ++ +LR
Sbjct: 229 TKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLR 269
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 162/390 (41%), Gaps = 89/390 (22%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI +
Sbjct: 50 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI------------T 97
Query: 107 GEFVSPAQDALFRVHD---RIVAEDSLADDEFG-------ELTLITVRMLVPADQIGCVI 156
GE DA+ R + R + E + A G L+ +++L+ +Q+G +I
Sbjct: 98 GEC-----DAISRAYAIVARALLEGAPAMGMGGIVQSNGTHLSSTAIKLLISHNQMGTII 152
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
G+ G I++I+ + ++ + + E LP S + +++V G P +++A+ +I L ++
Sbjct: 153 GRQGLKIKHIQDVSGVRM-VAQKEMLPQ---STERIVEVQGTPDGIQRAVWEICKCLVDD 208
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
R +L + Q+ S L +Y N R D S R V GN G
Sbjct: 209 WQRGTGTVLYNPVVRTQAG----SGGLGSNYNNGGGRSDYGSPR------VMRTGN-GAD 257
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSE 336
GG ++ S ++ D AA R P
Sbjct: 258 FSNGG-------------VRPFSRRSDSD--------------------AASRGPP---- 280
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
T E+G+ + T I +P+ +GC+IGR G+ ISE+R + A I I A E
Sbjct: 281 -THDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI---------AKTGE 330
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFER 426
M I G+ SAL + L A R
Sbjct: 331 RMFTIMGTAKANESALFLLYENLEAEKMRR 360
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 32/166 (19%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-------- 313
++RL+ +G +IGK G IK+IR+ESGA I + S G+ + + T
Sbjct: 74 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCPERIVTITGTLGVIGKAF 132
Query: 314 ----KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+F ED + L P K P IT R++VP+ Q G LIG+GG+ I
Sbjct: 133 NMVCNKFEED--------MLLLPNSVPK-------PPITMRVIVPATQCGSLIGKGGSKI 177
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++R AT ASI++ +E +P + E V ++G+ D + ++QV
Sbjct: 178 KDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQV 219
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 28/173 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS----SEGTNL 102
R L +++GSIIGK G+ +K++R E+ + I IS+ C ERIVTI + + N+
Sbjct: 77 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIGKAFNM 134
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ E D ++ +S+ IT+R++VPA Q G +IGKGG
Sbjct: 135 VCNKFE------------EDMLLLPNSVPKPP------ITMRVIVPATQCGSLIGKGGSK 176
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
I++IR T A I++ E LP S + + ++G + + Q+ L E
Sbjct: 177 IKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVCQILLE 225
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++T+R+L+ ++G +IGK G I+ IR E+ A+I I D P + ++ + G
Sbjct: 73 VLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCP------ERIVTITGTL 125
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
V+ KA + ++ E+ LLL +S
Sbjct: 126 GVIGKAFNMVCNKFEED-----MLLLPNS----------------------------VPK 152
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
++R++ PA G +IGKGG IK IR+ +GASI+V S
Sbjct: 153 PPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS 192
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 167/402 (41%), Gaps = 68/402 (16%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
+ + R L ++ G IIGKGG+ V ++R +T + +S+ V G +RI ++ EG
Sbjct: 18 ASNVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGV 77
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
S + A+ L + + A D T +R+LV + +G +IG+ G
Sbjct: 78 -----SKAYAIVAEAIL---QNPLAATDPALTVPPPTATTTIIRVLVSHNLMGSIIGRQG 129
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ I+ + ++ + E LP S + +++V G P +R A+ +I L ++ R+
Sbjct: 130 SKIKEIQDTSGVRM-VASKEMLPQ---STERVVEVQGAPDAIRVAIHEIGKCLMDDWERA 185
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS--LRLVCPAGNIGGVIG 278
+L YQ + P G A + + FS R P GN G
Sbjct: 186 HGTVL------YQPGALGAEGPSAAYPGGVLAGGFGGANQGFSNGRRSSAPLGNANGNPL 239
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP---SPTITAALRLQPRCS 335
GG R+ S + ST E+P S + L P +
Sbjct: 240 SGGA-----RRASN-----------------YNSTN--IENPPHRSREGSLGASLPPAST 275
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
++ R T I +PS +GC+IG+GGA I+E+R + + I I K +++
Sbjct: 276 DQVLR-------TQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIA------KTPHDE 322
Query: 396 --EEMVQITGSLDVASSALSQVTLRL------RANTFEREGA 429
E M I GS + AL + +L R NT + E A
Sbjct: 323 SGERMFTIIGSPEANEKALFLLYNQLESEKERRVNTVQEEEA 364
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 80/201 (39%), Gaps = 33/201 (16%)
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD-------------SSGAEGD 305
A +LR + G +IGKGG + +IR+++G V S G EG
Sbjct: 18 ASNVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGLEGV 77
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRG 365
I + ++P AL + P + T R+LV +G +IGR
Sbjct: 78 SKAYAIVAEAILQNPLAATDPALTVPPPTATTT---------IIRVLVSHNLMGSIIGRQ 128
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV-------TLR 418
G+ I E++ + + + + E +P+ E +V++ G+ D A+ ++ R
Sbjct: 129 GSKIKEIQDTSGVRM-VASKEMLPQ---STERVVEVQGAPDAIRVAIHEIGKCLMDDWER 184
Query: 419 LRANTFEREGALAAHPPVLPY 439
+ GAL A P Y
Sbjct: 185 AHGTVLYQPGALGAEGPSAAY 205
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 86/178 (48%), Gaps = 32/178 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + +++GSIIGK GEIV + R E+ + I IS+ C ERIVT
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-------------- 70
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQ 161
VS +A+F I + +EF ++ T I +R++VPA Q G +IGK G
Sbjct: 71 ---VSGTTNAIFSAFTLITKKF----EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGS 123
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 124 KIKEIRQTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 177
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER--ESGDPVITTRILVPSAQIGCLIG 363
+ +T F +A L + E+ + G I R++VP++Q G LIG
Sbjct: 68 IVTVSGTTNAIF--------SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIG 119
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
+ G+ I E+R T SI++ + E +P E V ++GS + + + Q+ L
Sbjct: 120 KSGSKIKEIRQTTGCSIQVAS-EMLPN---STERAVTLSGSAEQITQCIYQICL------ 169
Query: 424 FEREGALAAHPP---VLPYVP 441
+ PP +PY P
Sbjct: 170 -----VMLESPPRGATIPYRP 185
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 98 E 98
E
Sbjct: 158 E 158
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 34/173 (19%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+GSIIGKG VK++R E+ + I ISE C ERI+T+ +
Sbjct: 1 VGSIIGKGKS-VKKMREESGARINISEG--NCPERIITLAGPT----------------- 40
Query: 115 DALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGKGGQVIQNI 166
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGKGG I+ I
Sbjct: 41 NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 98
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
R T AQ+++ D LP S + + +AG P + + + QI + E+P +
Sbjct: 99 RESTGAQVQVAGD-MLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPK 147
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGKG + K++R+ESGA I + + T F+ + I L
Sbjct: 1 VGSIIGKGKSV-KKMREESGARINISEGNCPERIITLAGPTNAIFKAFA-MIIDKLEEDI 58
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
S + P +T R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 59 SSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 108
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 38/146 (26%)
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
+G +IGKG V + +R E+ A+I I + + P + ++ +AG + KA I
Sbjct: 1 VGSIIGKGKSV-KKMREESGARINI-SEGNCP------ERIITLAGPTNAIFKAFAMIID 52
Query: 212 RLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAG 271
+L E+ S S N +A AS +LRLV PA
Sbjct: 53 KLEEDISSSMT--------------------------NSTA----ASRPPVTLRLVVPAS 82
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKV 297
G +IGKGG IK+IR+ +GA ++V
Sbjct: 83 QCGSLIGKGGCKIKEIRESTGAQVQV 108
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 68 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 122
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 123 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 178
Query: 220 SQHLLLS 226
S L +S
Sbjct: 179 SSCLNIS 185
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 64 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 118
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 119 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 46 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 97
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADDEF 135
PG ER+ I + E N + F++ P + + ++ D
Sbjct: 98 FYPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSSQKTEPVSILQPQTTVNPDRI 154
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQ 194
+ +++VP G +IGKGG ++ + ++ A +++ K E + L + ++
Sbjct: 155 KQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVT 205
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
V+GEP RKA+ I ++ E+P S L +S S+
Sbjct: 206 VSGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 240
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDC 307
R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C
Sbjct: 48 RSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQI 358
+I T E I +R P+ S+KTE S D + +++VP++
Sbjct: 108 LIQ-GTVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTA 166
Query: 359 GCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 167 GLIIGKGGATVKAVMEQSGAWVQL 190
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 184 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 243
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 244 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 298
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 299 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 354
Query: 220 SQHLLLS 226
S L +S
Sbjct: 355 SSCLNIS 361
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 180 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 239
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 240 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 294
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 295 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 349
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 60/288 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ GT
Sbjct: 45 RAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGT------ 98
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
R + +VA+ L + G +++ VR+L+ +Q+G +IG+
Sbjct: 99 -----------ARAY-ALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQ 146
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P + KA+ +I L ++ R
Sbjct: 147 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 202
Query: 220 SQHLLL----------SSSSNIYQSSGVYLSAP---------LVGSYGNYSARRDEASAR 260
+L S S+N +G Y S P G YS+RR + A
Sbjct: 203 GTGTILYNPAVRASVGSGSTNTNMGNG-YGSRPYNRTGNGADFSDQSGGYSSRRSNSDAG 261
Query: 261 EFSL-----------RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
F + + PA +G +IG+ G I +IR+ SGA I +
Sbjct: 262 RFPMVAEDGDEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI 309
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEM 398
E GD + T I +P+ +GC+IGR G+ I+E+R ++ A I I K +++ E M
Sbjct: 268 EDGDEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI------AKAPHDETGERM 321
Query: 399 VQITGSLDVASSALSQVTLRLRANTFEREGALAAHPP 435
I GS AL + L A R + PP
Sbjct: 322 FTIMGSAAANEKALYLLYENLEAEKTRR----SQQPP 354
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
+VAED DE + T + +PAD +GC+IG+ G I IR + A+I I K H
Sbjct: 265 MVAEDG---DE-----IQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPH-- 314
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLH-ENPSRSQH 222
+ + + + G A KAL + L E RSQ
Sbjct: 315 --DETGERMFTIMGSAAANEKALYLLYENLEAEKTRRSQQ 352
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+ + R+ESGA I + + +T F S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF---S 80
Query: 322 PTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
+ + CS+ + + G I R++VP++Q G LIG+ G+ I E+R T SI
Sbjct: 81 AFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSI 140
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ +E +P E V ++GS + + + Q+ L +
Sbjct: 141 QV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 38/159 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G+++ R E+ A+I I D P + ++ V+G
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ A I + E S+ VG G
Sbjct: 77 AIFSAFTLITKKFEEWCSQFND---------------------VGKVGKT---------- 105
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+ +RL+ PA G +IGK G IK+IRQ +G SI+V S
Sbjct: 106 QIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVAS 144
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 50 GCTKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 101
Query: 83 ---VPGCDERIVTIYSSSEGTN-----LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
PG ER+ I + E N + E E AQ + + ++ D
Sbjct: 102 KDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKP--EPVSILQPQTTVNPDR 159
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELL 193
+ +++VP G +IGKGG ++ + ++ A +++ K E + L + ++
Sbjct: 160 VKQ-----AKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVV 210
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 211 TISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 246
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 15/146 (10%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGD 305
+ R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G
Sbjct: 52 TKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 111
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSA 356
C+I T E I +R P+ ++K E S D V +I+VP++
Sbjct: 112 VCLIQ-GTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNS 170
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 171 TAGLIIGKGGATVKAVMEQSGAWVQL 196
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 32/166 (19%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-------- 313
++RL+ +G +IGK G IK+IR+ESGA I + S G+ + + T
Sbjct: 73 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCPERIVTITGTLGVIGKAF 131
Query: 314 ----KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+F ED + L P K P IT R++VP+ Q G LIG+GG+ I
Sbjct: 132 NMVCNKFEED--------MLLLPNSVPK-------PPITMRVIVPATQCGSLIGKGGSKI 176
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++R AT ASI++ +E +P + E V ++G+ D + ++QV
Sbjct: 177 KDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQV 218
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS----SEGTNL 102
R L +++GSIIGK G+ +K++R E+ + I IS+ C ERIVTI + + N+
Sbjct: 76 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIGKAFNM 133
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ E D ++ +S+ IT+R++VPA Q G +IGKGG
Sbjct: 134 VCNKFE------------EDMLLLPNSVPKPP------ITMRVIVPATQCGSLIGKGGSK 175
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++IR T A I++ E LP S + + ++G + + Q+ L E P +
Sbjct: 176 IKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVCQILLEAPPK 228
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++T+R+L+ ++G +IGK G I+ IR E+ A+I I D P + ++ + G
Sbjct: 72 VLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCP------ERIVTITGTL 124
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
V+ KA + ++ E+ LLL +S
Sbjct: 125 GVIGKAFNMVCNKFEED-----MLLLPNS----------------------------VPK 151
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
++R++ PA G +IGKGG IK IR+ +GASI+V S
Sbjct: 152 PPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS 191
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 164/398 (41%), Gaps = 81/398 (20%)
Query: 18 DAATNGGSKRRNPGDE---------TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQ 68
DA+ G ++ P D+ QR + +E+ Y P + +G IIG+GGE + +
Sbjct: 48 DASLYGYGVQKRPMDDPVGNQLGALVHQRAVMTEE----YNVPDKMVGFIIGRGGEQISR 103
Query: 69 LRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+++E+ I+I+ G ER + + E + A+ L ++ DR
Sbjct: 104 IQAESGCKIQIAPDSGGMPERPCVLTGTPES----------IEQAKRLLGQIVDRCRNGP 153
Query: 129 SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALS 188
+D G T+ + L+PA ++G VIGKGG+ I+ ++ T ++ +++D LP A
Sbjct: 154 GFHNDMDGSSTVQEI--LIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA-- 209
Query: 189 FDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYG 248
D+ L++ G+P V++A + + E A G
Sbjct: 210 -DKPLRITGDPFKVQQARDLVLEIIREKD----------------------QADFRGIRS 246
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
++S+R S+ + P +G +IG+ G +IK+I+ ++G I+ DD +
Sbjct: 247 DFSSRIGGG-----SVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKP-----DDGL 296
Query: 309 IFISTKEFFEDPSPTITAALRLQPRCSEKTERES--------------GDPVITT----- 349
+ P AA + ER+ GD ++T
Sbjct: 297 SPERVAQVMGLPDRCQHAAHIINELILTAQERDGFGGLSLARGRGRSRGDWNLSTPGSMQ 356
Query: 350 --RILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
VP+ + G +IG+GG I + + A + + N
Sbjct: 357 EINYTVPADKCGLVIGKGGENIKNINQQSGAHVELQRN 394
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 118/291 (40%), Gaps = 37/291 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + G TV L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 150 RNGPGFHNDMDG---SSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLP 206
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + + E + A FR + D + +V
Sbjct: 207 TGADKPLRITGDPFKVQQARDLVLEIIREKDQADFR---------GIRSDFSSRIGGGSV 257
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G +IG+ G++I+ I+ + +I+ D+ LS + + QV G P +
Sbjct: 258 EVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDD-----GLSPERVAQVMGLPDRCQ 312
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVY-LSAPLVGSYGNYSARRDEASAREF 262
A I + R LS + +S G + LS P NY+
Sbjct: 313 HAAHIINELILTAQERDGFGGLSLARGRGRSRGDWNLSTPGSMQEINYT----------- 361
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 362 -----VPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPAVRIFT 407
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 140/357 (39%), Gaps = 67/357 (18%)
Query: 88 ERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITV 143
R+ I + +G +SG V A + V R + D ++ G L ++T
Sbjct: 25 HRVRQIAAKIDGIPHLNNSGPLVD-ASLYGYGVQKRPM--DDPVGNQLGALVHQRAVMTE 81
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPA 200
VP +G +IG+GG+ I I+ E+ +I+I D +P C L+ G P
Sbjct: 82 EYNVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLT--------GTPE 133
Query: 201 VVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
+ +A L QI R P H + SS + +
Sbjct: 134 SIEQAKRLLGQIVDRCRNGPGF--HNDMDGSSTVQE------------------------ 167
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFISTKE 315
++ PA +G VIGKGG IKQ+++ +G + + G G D + I+
Sbjct: 168 --------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDP 219
Query: 316 F-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISE 371
F + + +R + + + R I + + VP +G +IGR G +I +
Sbjct: 220 FKVQQARDLVLEIIREKDQADFRGIRSDFSSRIGGGSVEVSVPRFAVGIIIGRNGEMIKK 279
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
+++ A +RI + P E + Q+ G D A + + L ER+G
Sbjct: 280 IQN--DAGVRI---QFKPDDGLSPERVAQVMGLPDRCQHA-AHIINELILTAQERDG 330
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 163/400 (40%), Gaps = 95/400 (23%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ + +G
Sbjct: 50 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNLDGV---- 105
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT-----VRMLVPADQIGCVIGKG 159
+ + AQ +L D G + VR+L+ +Q+G +IG+
Sbjct: 106 -AKAYAMVAQ--------------TLVDSPPGAIPTTPMGTHPVRLLISHNQMGTIIGRQ 150
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G +R+A+ +I L ++ R
Sbjct: 151 GLKIKHIQDVSGVRM-VAQKEMLPQ---STERIVEVQGSADGIRQAIWEIGKCLVDDWQR 206
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+G L P V S ++ G+ VI
Sbjct: 207 G--------------TGTILYNPAVRSNTSHGT------------------GSSPSVISN 234
Query: 280 GGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKEFFEDPSPTITAALRLQPR--CSE 336
GG +G S D + + + F +PSP+ PR S+
Sbjct: 235 GG---------AGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSPSF-------PRRGHSD 278
Query: 337 KTER--------ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENV 388
T R E+G+ + T I +P+ +GC+IGRGG+ ISE+R ++ A I I
Sbjct: 279 STSRASAPAPNTENGEELQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIA----- 333
Query: 389 PKVAYED--EEMVQITGSLDVASSALSQVTLRLRANTFER 426
K ++D E M I GS AL + L A R
Sbjct: 334 -KAPHDDTGERMFTIVGSPQSNEKALYLLYENLEAEKTRR 372
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
L T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G P
Sbjct: 296 LQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPH----DDTGERMFTIVGSP 351
Query: 200 AVVRKALVQIASRLH-ENPSRSQ 221
KAL + L E RSQ
Sbjct: 352 QSNEKALYLLYENLEAEKTRRSQ 374
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 50/269 (18%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR I +ED + P + +G IIG+GGE + +++ E+ I+I+ G +R
Sbjct: 73 GGMVHQRAIMTED----FKVPDKMVGFIIGRGGEQITRIQLESGCKIQIAADSGGMMDRA 128
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
T+ S E + A+ L ++ DR E + I +L+PA
Sbjct: 129 CTLTGSPEN----------IEQAKRLLSQIVDRCRNGPGF-HSEMDSNSAIQ-EILIPAS 176
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG I+ ++ T ++ +++D +P A D+ L++ G+P V++A +
Sbjct: 177 KVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGA---DKPLRITGDPYKVQQARELVV 233
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR--EFSLRLVC 268
+ + G++ A R + +R SL +
Sbjct: 234 EIIRDK-----------------------------DQGDFRASRGDFGSRLGGSSLDVAV 264
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P +G VIG+ G +IK+I+ +SG I+
Sbjct: 265 PRFAVGIVIGRNGEMIKKIQNDSGVRIQF 293
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 116/278 (41%), Gaps = 43/278 (15%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG +E + S + L P K+G +IGKGG+ +KQL+ T + + + P
Sbjct: 153 RNGPGFHSE---MDSNSAIQEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMP 209
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFG-ELTLIT 142
G D+ + + E E + FR + +FG L +
Sbjct: 210 TGADKPLRITGDPYKVQQARELVVEIIRDKDQGDFRA----------SRGDFGSRLGGSS 259
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+ + VP +G VIG+ G++I+ I+ ++ +I+ D+ +S D + QV G+
Sbjct: 260 LDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPDD-----GISPDRIAQVMGQSDRC 314
Query: 203 RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+ A+ HL+ + G +P VG G R D
Sbjct: 315 QHAV---------------HLINELVQTAQERDG--FGSP-VGPRGRGRGRGDWNMGAPG 356
Query: 263 SLRLVC---PAGNIGGVIGKGGGIIKQIRQESGASIKV 297
L+ V PA G VIGKGG IK I Q+SGA +++
Sbjct: 357 GLQEVTYSIPADKCGLVIGKGGETIKNINQQSGAHVEL 394
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDS-SGAEGDDCIIFISTKEFFEDPSPTITA 326
P +G +IG+GG I +I+ ESG I++ + SG D + E E ++
Sbjct: 88 VPDKMVGFIIGRGGEQITRIQLESGCKIQIAADSGGMMDRACTLTGSPENIEQAKRLLS- 146
Query: 327 ALRLQPRCSE----KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
++ RC +E +S + IL+P++++G +IG+GG I +++ T + +
Sbjct: 147 --QIVDRCRNGPGFHSEMDSNSAI--QEILIPASKVGLVIGKGGDTIKQLQERTGVKMMM 202
Query: 383 LTNENVPKVAYEDEEMVQITG 403
+ + +P A ++ ++ITG
Sbjct: 203 IQDGPMPTGA---DKPLRITG 220
>gi|149039051|gb|EDL93271.1| rCG45587 [Rattus norvegicus]
Length = 569
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 123/266 (46%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFTSR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FVVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR V D + G + +
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG----VRSDFTSRAGGGSIEVSVP 261
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R +V G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 262 RFVV-----GIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E +Q + + G VG+ G
Sbjct: 312 HA----ARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 66/303 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGGG---SIEVSVPRFVVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E Q+ G D A +++ L
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-ARIINELILTAQ 325
Query: 425 ERE 427
ERE
Sbjct: 326 ERE 328
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 163/377 (43%), Gaps = 52/377 (13%)
Query: 57 SIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDA 116
++IGKGGE V +R + + +S+ G ERI+T+ SG V A
Sbjct: 132 TVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTV------------SG--VVDAAAK 177
Query: 117 LFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
F + R + + L + +R+LVP IG +IGKGG I+ I+ ++ A++
Sbjct: 178 AFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQSGARLN- 236
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-------PSRSQHLLLSSSS 229
D LPL S + + V G V A +AS L E P+ S + S
Sbjct: 237 ASDACLPL---STERSVVVLGVADAVHIATYYVASTLLEQLTERFGGPTASAYATRSGGP 293
Query: 230 NIYQSSGV----YLSAPLVGSYGNY-SARRDEASAREFSLRLVCPAGNIGGVIGKGGGII 284
G+ Y+ P G+YG+ + R ++ +R+ PA G +G G
Sbjct: 294 AGVIPGGMQVVPYVPQPAGGNYGHPDNVRHNDIRSRQ------TPAAQYGQPYAQGPG-- 345
Query: 285 KQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD 344
Q+ GAS+ S A G + ++ P A QP G
Sbjct: 346 ---PQQGGASMHYGGSPAAGYGGVAPQQPQQVGHG-GPASHAGPPAQPMQGVV----PGQ 397
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
P +T +I +P+ +G +IG+GGA I+E+R + + I+I N P+ +E +V ITG+
Sbjct: 398 P-LTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKI----NEPQ-DNSNERLVTITGT 451
Query: 405 LDVASSALSQVTLRLRA 421
+ AL + RL +
Sbjct: 452 AECNQMALYMLYSRLES 468
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 114/277 (41%), Gaps = 55/277 (19%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S GN + + DE+S +R V + VIGKGG + IR+ SGA V
Sbjct: 106 SSGN-ALQHDESSW--IHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAV 162
Query: 306 DCIIFIS------TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIG 359
+ I+ +S K F I L +P T + P+ R+LVP IG
Sbjct: 163 ERILTVSGVVDAAAKAFG-----LIIRTLNGEPLDQPSTPQSRTYPL---RLLVPHVLIG 214
Query: 360 CLIGRGGAIISEMR-------SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
+IG+GG I E++ +A+ A + + T +V + D + + VAS+ L
Sbjct: 215 SIIGKGGVRIREIQEQSGARLNASDACLPLSTERSVVVLGVADAVHI---ATYYVASTLL 271
Query: 413 SQVTLRLRANTFE----REGALAAHPP----VLPYVPMSLDITDGSKYGNRD----NQSR 460
Q+T R T R G A P V+PYVP G YG+ D N R
Sbjct: 272 EQLTERFGGPTASAYATRSGGPAGVIPGGMQVVPYVPQPA----GGNYGHPDNVRHNDIR 327
Query: 461 GR-------GNSYATGNLPGRDSYGS---YGGSLSGG 487
R G YA G PG G+ YGGS + G
Sbjct: 328 SRQTPAAQYGQPYAQG--PGPQQGGASMHYGGSPAAG 362
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 3 GQSNINYGKRTHFQSDAATNGG-SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGK 61
G YG Q +GG + P + Q + + + P +G+IIGK
Sbjct: 357 GSPAAGYGGVAPQQPQQVGHGGPASHAGPPAQPMQGVVPGQPLTQQIYIPNDMVGAIIGK 416
Query: 62 GGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVH 121
GG + ++R + S I+I+E +ER+VTI ++E + AL+ ++
Sbjct: 417 GGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQM-------------ALYMLY 463
Query: 122 DRIVAE 127
R+ +E
Sbjct: 464 SRLESE 469
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 182/416 (43%), Gaps = 62/416 (14%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG + Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 97 SRQGSPGSVSRQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 153
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 154 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 196
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 197 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 254
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 255 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 313
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 314 YPQFEQSETE------TVHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 367
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 368 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 423
Query: 366 GAI-------ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
G ++E+++ + A + ++ + P D+ +V+ITG ++ S+
Sbjct: 424 GKTASTSAKPVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQASCSE 476
>gi|189238744|ref|XP_972178.2| PREDICTED: similar to P-element somatic inhibitor [Tribolium
castaneum]
Length = 727
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 23/263 (8%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
+ P K+G IIGKGGE +KQL+ ++ + + + + P ++ S +
Sbjct: 196 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAKQLV 255
Query: 109 FVSPAQDALFRVHDRI---VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+ A+ + + R +D +++G +LVP +G VIGKGG +I+
Sbjct: 256 YDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGDMIKK 315
Query: 166 IRTETRAQIRILKD-EHLP---LCALSFDELLQVAGEPAVVRKA------LVQIASRLHE 215
I+ ET A+++ + E P C LS G P V +A L+ R
Sbjct: 316 IQAETGARVQFQQAREEGPGERRCYLS--------GTPKQVEQARQRIEELIDSVHRRDG 367
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
Q + Y S G YG + RR + + +E + V P+ G
Sbjct: 368 GDGPGQGRGRGRGGDRYDSRGGSNRNGGGQDYGGWDDRRQQQAPQEVTF--VVPSSKCGV 425
Query: 276 VIGKGGGIIKQIRQESGASIKVD 298
+IG+GG IKQI Q+SGA ++D
Sbjct: 426 IIGRGGETIKQINQQSGAHCELD 448
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 50/268 (18%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P + +G IIG+GGE + +L+SE+ I+++ G +R+ ++ + E N + E
Sbjct: 103 VPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPDRVCSLSGTKEAINRAK---EL 159
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLIT------VRMLVPADQIGCVIGKGGQVI 163
+ + VH R + + G V +++P ++G +IGKGG+ I
Sbjct: 160 I------MNIVHQRGMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLIIGKGGETI 213
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR--KALVQ--IASRLHENPSR 219
+ ++ ++ A++ +++D ++ L+++G+P+ V K LV IA + +N +R
Sbjct: 214 KQLQEKSGAKMVVIQDG----PNQEQEKPLRISGDPSKVEYAKQLVYDLIAEKEMQNYNR 269
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR---DEASAREFSLRLVCPAGNIGGV 276
G G R+ D ++ P +G V
Sbjct: 270 R------------------------GGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVV 305
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEG 304
IGKGG +IK+I+ E+GA ++ + EG
Sbjct: 306 IGKGGDMIKKIQAETGARVQFQQAREEG 333
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 67 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 121
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 122 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 177
Query: 220 SQHLLLS 226
S L +S
Sbjct: 178 SSCLNIS 184
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 3 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 62
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 63 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 117
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 118 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 172
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR S +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPSFHNDVDGNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGT---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G++ +R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRSVRGDFGSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 52/283 (18%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + +
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGDPFKVQ 222
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR S+ D + ++ + VP +G VIG+ G
Sbjct: 223 QAREMVLEIIREKDQADFR---------SVRGDFGSRMGGGSIEVSVPRFAVGIVIGRNG 273
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + QV G P R
Sbjct: 274 EMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPP------------------DRC 310
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR-EFS---------LRLVCPA 270
QH +++I S + L+A +G+ + R +R ++S + PA
Sbjct: 311 QH-----AAHII--SELILTAQERDGFGSLAVPRGRGRSRGDWSVGTPGGVQEITYTVPA 363
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 364 DKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 120/301 (39%), Gaps = 60/301 (19%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R PS H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPSF--HNDVDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGA 367
+ F + + +R + + ++ R + + + VP +G +IGR G
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRSVRGDFGSRMGGGSIEVSVPRFAVGIVIGRNGE 274
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+I ++++ I+ ++ + E Q+ G D A + + L ER+
Sbjct: 275 MIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHIISELILTAQERD 328
Query: 428 G 428
G
Sbjct: 329 G 329
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 38/216 (17%)
Query: 14 HFQSDAATNGGSKRRN--PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRS 71
+S+AA N +KR N PG + + I + L P GSIIGKGG+ + QL+
Sbjct: 50 EVESEAAMN--TKRTNLGPGPVDDNKYI------LKMLIPSTAAGSIIGKGGQTIAQLQR 101
Query: 72 ETKSNIRISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+T +N+++S+ PG ER+ + E N A+F + + E
Sbjct: 102 DTGTNVKLSKANDFYPGTQERVALLTGPVESLN------------NVAVFVLEK--IKES 147
Query: 129 SLADDEFGELTLIT------VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEH 181
+ G T+ + V+++VP G +IGKGG +I++I ++ ++++I K +
Sbjct: 148 PQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDG 207
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ L + ++ ++GEP RKA+ I +++ E+P
Sbjct: 208 ITLS----ERVITISGEPENNRKAMSFIVNKIQEDP 239
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV----DSSGAEGDDCIIFISTKEF 316
++ L+++ P+ G +IGKGG I Q+++++G ++K+ D + + E
Sbjct: 73 KYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVES 132
Query: 317 FEDPSPTITAALRLQPRCSEKTERE---SGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
+ + + ++ P+ K E S + +I+VP++ G +IG+GGA+I +
Sbjct: 133 LNNVAVFVLEKIKESPQLGVKAGAETITSPERARQVKIVVPNSTAGLIIGKGGAMIKSIM 192
Query: 374 SATRASIRI 382
+ + ++I
Sbjct: 193 EQSGSRVQI 201
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 32/166 (19%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-------- 313
++RL+ +G +IGK G IK+IR+ESGA I + S G+ + + T
Sbjct: 76 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCPERIVTITGTLGVIGKAF 134
Query: 314 ----KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+F ED + L P K P IT R++VP+ Q G LIG+GG+ I
Sbjct: 135 NMVCNKFEED--------MLLLPNSVPK-------PPITMRVIVPATQCGSLIGKGGSKI 179
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++R AT ASI++ +E +P + E V ++G+ D + ++QV
Sbjct: 180 KDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQV 221
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS----SEGTNL 102
R L +++GSIIGK G+ +K++R E+ + I IS+ C ERIVTI + + N+
Sbjct: 79 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIGKAFNM 136
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ E D ++ +S+ IT+R++VPA Q G +IGKGG
Sbjct: 137 VCNKFE------------EDMLLLPNSVPKPP------ITMRVIVPATQCGSLIGKGGSK 178
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++IR T A I++ E LP S + + ++G + + Q+ L E P +
Sbjct: 179 IKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVCQILLEAPPK 231
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++T+R+L+ ++G +IGK G I+ IR E+ A+I I D P + ++ + G
Sbjct: 75 VLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCP------ERIVTITGTL 127
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
V+ KA + ++ E+ LLL +S
Sbjct: 128 GVIGKAFNMVCNKFEED-----MLLLPNS----------------------------VPK 154
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
++R++ PA G +IGKGG IK IR+ +GASI+V S
Sbjct: 155 PPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS 194
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 23/263 (8%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
+ P K+G IIGKGGE +KQL+ ++ + + + + P ++ S +
Sbjct: 225 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAKQLV 284
Query: 109 FVSPAQDALFRVHDRI---VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
+ A+ + + R +D +++G +LVP +G VIGKGG +I+
Sbjct: 285 YDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGDMIKK 344
Query: 166 IRTETRAQIRILKD-EHLP---LCALSFDELLQVAGEPAVVRKA------LVQIASRLHE 215
I+ ET A+++ + E P C LS G P V +A L+ R
Sbjct: 345 IQAETGARVQFQQAREEGPGERRCYLS--------GTPKQVEQARQRIEELIDSVHRRDG 396
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
Q + Y S G YG + RR + + +E + V P+ G
Sbjct: 397 GDGPGQGRGRGRGGDRYDSRGGSNRNGGGQDYGGWDDRRQQQAPQEVTF--VVPSSKCGV 454
Query: 276 VIGKGGGIIKQIRQESGASIKVD 298
+IG+GG IKQI Q+SGA ++D
Sbjct: 455 IIGRGGETIKQINQQSGAHCELD 477
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 122/274 (44%), Gaps = 56/274 (20%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P + +G IIG+GGE + +L+SE+ I+++ G +R+ ++ + E N + E
Sbjct: 126 VPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPDRVCSLSGTKEAINRAK---EL 182
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLIT------------VRMLVPADQIGCVIG 157
+ + VH R E ++ + V +++P ++G +IG
Sbjct: 183 I------MNIVHQRGRTEGLGMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLIIG 236
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR--KALVQ--IASRL 213
KGG+ I+ ++ ++ A++ +++D ++ L+++G+P+ V K LV IA +
Sbjct: 237 KGGETIKQLQEKSGAKMVVIQDG----PNQEQEKPLRISGDPSKVEYAKQLVYDLIAEKE 292
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR---DEASAREFSLRLVCPA 270
+N +R G G R+ D ++ P
Sbjct: 293 MQNYNRR------------------------GGGGRQDDRQQYNDYGGGGGNEAEVLVPR 328
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+G VIGKGG +IK+I+ E+GA ++ + EG
Sbjct: 329 QAVGVVIGKGGDMIKKIQAETGARVQFQQAREEG 362
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 165/386 (42%), Gaps = 71/386 (18%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVPGCDE 88
G++ QR D R L +G+IIG+ G ++Q+ +T++ + + E V G E
Sbjct: 1 GNQGPQR---QPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV-GSLE 56
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ +TIY + E +A RV + V + + GE++L ++L
Sbjct: 57 KAITIYGNPENCT-------------NACRRVLE--VMQQEADNTNKGEISL---KILAH 98
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+ IG +IGKGG I+ + ET +I + L D + + + + ++ + G + +A
Sbjct: 99 NNLIGRIIGKGGSTIKRVMLETETKITVSSLND----VSSFNMERVITIKGTIDNMSRAE 154
Query: 207 VQIASRLHEN------PSRSQHLLLSSSSNIYQSSGVYLS-------APLVGSYGNYS-- 251
I+++L ++ Q ++ + S V + P + G Y
Sbjct: 155 GMISAKLRQSYESDLQAMAPQSMMFPGLHPMAMMSTVGMGFSPSVRGTPPAAAPGMYPPG 214
Query: 252 ----ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS------SG 301
A+ A E S L P +G +IG G I+ I + SGAS+K+ S +
Sbjct: 215 AAPYAQAGPAGVGETSF-LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKITSLPEGTTAE 273
Query: 302 AEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-----ITTRILVPSA 356
+ + + + T E A + Q EK E P +T +LV S+
Sbjct: 274 PQAERKVTIVGTPE----------AQWKAQYLIFEKMREEGFMPAGEDVRLTVELLVASS 323
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
Q+G +IG+GG + EM+ T + I++
Sbjct: 324 QVGRIIGKGGQNVREMQRTTSSVIKL 349
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 16/253 (6%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+F LR++ + +G +IG+ GG I+QI Q++ A + V G + +P
Sbjct: 10 DFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGS----LEKAITIYGNP 65
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A R L+ E G+ I+ +IL + IG +IG+GG+ I + T
Sbjct: 66 ENCTNACRRVLEVMQQEADNTNKGE--ISLKILAHNNLIGRIIGKGGSTIKRVMLETETK 123
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPY 439
I + + +V ++ E ++ I G++D S A ++ +LR + A+A + P
Sbjct: 124 ITVSSLNDVS--SFNMERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQSMMFPG 181
Query: 440 V-PMSLDITDGSKYGNRDNQSRGRGNSYATGNL-PGRDSYGSYGGSLSGGGNAYGAYGDH 497
+ PM++ T G + RG + A G PG Y G +G G Y +
Sbjct: 182 LHPMAMMSTVGMGF---SPSVRGTPPAAAPGMYPPGAAPYAQAGP--AGVGETSFLYIPN 236
Query: 498 SSGRGLSGHRKNH 510
S+ + G R +H
Sbjct: 237 SAVGAIIGTRGSH 249
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 123/266 (46%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+ST + F + + T +LQ S DP T LVP+
Sbjct: 149 LLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 50/264 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRL--HENPSRS 220
IR I L L LS ++ V G+ V A V +L H P S
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++ + S++EF + P IG VIG+
Sbjct: 186 PSMVPGLDPG------------------------TQTSSQEF----LVPNDLIGCVIGRQ 217
Query: 281 GGIIKQIRQESGASIKVDSSGAEG 304
G I +IRQ SGA IK+ + AEG
Sbjct: 218 GSKISEIRQMSGAHIKIGNQ-AEG 240
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 84/166 (50%), Gaps = 32/166 (19%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST-------- 313
++RL+ +G +IGK G IK+IR+ESGA I + S G+ + + T
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCPERIVTITGTLGVIGKAF 130
Query: 314 ----KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAII 369
+F ED + L P K P IT R++VP+ Q G LIG+GG+ I
Sbjct: 131 NMVCNKFEED--------MLLLPNSVPK-------PPITMRVIVPATQCGSLIGKGGSKI 175
Query: 370 SEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
++R AT ASI++ +E +P + E V ++G+ D + ++QV
Sbjct: 176 KDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQV 217
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 28/177 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS----SEGTNL 102
R L +++GSIIGK G+ +K++R E+ + I IS+ C ERIVTI + + N+
Sbjct: 75 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVIGKAFNM 132
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ E D ++ +S+ IT+R++VPA Q G +IGKGG
Sbjct: 133 VCNKFE------------EDMLLLPNSVPKPP------ITMRVIVPATQCGSLIGKGGSK 174
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++IR T A I++ E LP S + + ++G + + Q+ L E P +
Sbjct: 175 IKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVCQILLEAPPK 227
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 40/160 (25%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++T+R+L+ ++G +IGK G I+ IR E+ A+I I D P + ++ + G
Sbjct: 71 VLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI-SDGSCP------ERIVTITGTL 123
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
V+ KA + ++ E+ LLL +S
Sbjct: 124 GVIGKAFNMVCNKFEED-----MLLLPNS----------------------------VPK 150
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
++R++ PA G +IGKGG IK IR+ +GASI+V S
Sbjct: 151 PPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVAS 190
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 187 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 241
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 242 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 297
Query: 220 SQHLLLS 226
S L +S
Sbjct: 298 SSCLNIS 304
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------F 310
+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 124 YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL 183
Query: 311 ISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
+ F + I A+ LQP+ + +R +++VP++ G +IG
Sbjct: 184 NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLIIG 238
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 239 KGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 292
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 50/220 (22%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-----DSSGAEGDDCIIFISTKEFF 317
S+R++C + IG VIGK G ++++ Q++GA IKV D+SG +I +S+ E
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGER----LIIVSSNEIP 268
Query: 318 EDP-SPTITAALRLQP---------------RCSEKTERESGDPVITTRILVPSAQIGCL 361
+P SPTI A + L RC E E+GD I RIL S IG +
Sbjct: 269 TEPISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSI--RILCASELIGSV 326
Query: 362 IGRGGAIISEMRSATRASIR--------------ILTNENVP--KVAYEDEEMV----QI 401
IG+ GA + + T A I+ I+++ +P ++ E ++ ++
Sbjct: 327 IGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKV 386
Query: 402 TGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVP 441
G +A AL+++ RLR T R+ + A +PP P+ P
Sbjct: 387 AGPPAIARGALTEIASRLRTRTL-RDTSTANNPP--PFAP 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 48/221 (21%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD-ERIVTIYSSSEGTN 101
D R LC IGS+IGK G V+++ +T + I++ E ER++ + S+
Sbjct: 211 DKSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSN----- 265
Query: 102 LFEDSGEFVSPAQDALFRVHDRIV-AE-----------DSLADDEFGELTLITVRMLVPA 149
E E +SP +AL +HD+++ AE D L E G+ ++R+L +
Sbjct: 266 --EIPTEPISPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDK---SIRILCAS 320
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIR--------------ILKDEHLPLCALS--FDELL 193
+ IG VIGK G ++ + +T A+I+ I+ +P +S + L+
Sbjct: 321 ELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALI 380
Query: 194 ----QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSN 230
+VAG PA+ R AL +IASRL R++ L +S++N
Sbjct: 381 LLHDKVAGPPAIARGALTEIASRL-----RTRTLRDTSTAN 416
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 141 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 200
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + LI VP G +IGKGG
Sbjct: 201 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI-----VPNSTAGLIIGKGG 255
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 256 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 311
Query: 220 SQHLLLS 226
S L +S
Sbjct: 312 SSCLNIS 318
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 88/190 (46%), Gaps = 29/190 (15%)
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAE 303
N R +E E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G
Sbjct: 128 NLQIRAEEG---EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 184
Query: 304 GDDCII------FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTR 350
C++ + F + I A+ LQP+ + +R +
Sbjct: 185 ERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAK 239
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
++VP++ G +IG+GGA + + + A +++ P+ E +V ++G +
Sbjct: 240 LIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHK 296
Query: 411 ALSQVTLRLR 420
A+S + +++
Sbjct: 297 AVSAIVQKVQ 306
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 162 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 221
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 222 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 276
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 277 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 332
Query: 220 SQHLLLS 226
S L +S
Sbjct: 333 SSCLNIS 339
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 158 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 217
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 218 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 272
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 273 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 327
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 118/296 (39%), Gaps = 77/296 (26%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +EF ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKF----EEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 129
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
T I++ E LP S + + ++G + + + QI + E+P R +
Sbjct: 130 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRP 185
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF------------------------- 262
+ + + GNY+ E +
Sbjct: 186 KPQVT-GPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALA 244
Query: 263 -----SLRLVCPAGN--------------IGGVIGKGGGIIKQIRQESGASIKVDS 299
LR PA IG +IGKGG I +IRQ SGA I++ +
Sbjct: 245 ALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 300
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 15/176 (8%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER--ESGDPVITTRILVPSAQIGCLIG 363
+ +T F +A L + E+ + G I R++VP++Q G LIG
Sbjct: 68 IVTVSGTTNAIF--------SAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIG 119
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 120 KSGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 171
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 98 E 98
E
Sbjct: 158 E 158
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 104 EDSGEFVSPAQDALFRVHDRIV----AEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
E+ + PA D L RVH RI+ + S A G ++ R+LVPA Q G +IGK
Sbjct: 6 EEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSG--AKVSTRLLVPASQAGSLIGKQ 63
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G +++I+ + +R+L E LP+ +L D +++V GE V KA+ IAS+L
Sbjct: 64 GGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQL 117
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
++TR+LVP++Q G LIG+ G + ++ A+ +R+L E++P + +D+ +V++ G
Sbjct: 45 VSTRLLVPASQAGSLIGKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAV 104
Query: 407 VASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRG 461
A+ + +LR +R ++P M + + + +QS G
Sbjct: 105 GVHKAVELIASQLRKFLVDRS--------IIPLFEMQMQMANPPMEQMPPHQSWG 151
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 33/235 (14%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 46 TKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 97
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR------IVAEDSLADDEF 135
PG ER+ I + E N D F++ + + + + + ++ D
Sbjct: 98 FYPGTTERVCLIQGTVEALNNVHD---FIAEKVREMPQSAQKTEPVSILQPQTTVNPDRV 154
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-LLQ 194
+ +++VP G +IGKGG ++ + ++ A +++ + ++ E ++
Sbjct: 155 KQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD----GINLQERVVT 205
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGN 249
++GEP RKA+ I ++ E+P S L + S SNI S V S P Y N
Sbjct: 206 ISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI-SYSNI--SGPVANSNPTGSPYAN 257
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDC 307
R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C
Sbjct: 48 RTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 107
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQI 358
+I T E + I +R P+ ++KTE S D V +++VP++
Sbjct: 108 LIQ-GTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTA 166
Query: 359 GCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 167 GLIIGKGGATVKAVMEQSGAWVQL 190
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
A + +VA LA ++ E V + VP + +G ++GKGG+ + + T A
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 173 QIRILKD-EHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
+I+I K E +P + + + + G PA + A I+ R+
Sbjct: 443 RIQISKKGEFVP---GTRNRKVTITGSPAATQAAQYLISQRI 481
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 158/388 (40%), Gaps = 78/388 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ V G +R++++ S G
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSG------- 100
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL---ITVRMLVPADQIGCVIGKGGQVI 163
+S A + + + + E + A G + +R+L+ +Q+G +IG+ G I
Sbjct: 101 ---ISKA----YGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKI 153
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ I+ + ++ + + E LP S + +++V G PA + KA+ +I L ++ R
Sbjct: 154 KQIQDASGVRM-VAQKEMLPQ---STERIVEVQGSPAGIEKAVWEIGKCLIDDHERGY-- 207
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
G L P+V + A S P+G++GG
Sbjct: 208 ------------GTVLYNPVV-------RVQPGAGPGPLSNGGSAPSGSMGG-------- 240
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
S GA+ D S + + AA R P T E G
Sbjct: 241 ---------RSYNRTGHGADFSDSPPAFSRRSGSD-------AASRPPP----PTHTEDG 280
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMVQI 401
+ + T I +PS +GC+IGRGG ISE+R + A I I K ++D E M I
Sbjct: 281 EEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIA------KAPHDDTGERMFTI 334
Query: 402 TGSLDVASSALSQVTLRLRANTFEREGA 429
TGS AL + L A R A
Sbjct: 335 TGSASANEKALYLLYENLEAEKMRRSQA 362
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 25 SKRRNPGDETEQRGIG----SEDTV---------YRYLCPLRKIGSIIGKGGEIVKQLRS 71
+KR N GD Q I S D V + L P GSIIGKGG+ + QL+
Sbjct: 46 TKRTNTGDRCNQAAIHDPPFSSDIVGFHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK 105
Query: 72 ETKSNIRISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR----- 123
ET + I++S++ PG ER+ I + E N D F++ + + +
Sbjct: 106 ETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNVHD---FIAEKVREMPQSAQKTEPVS 162
Query: 124 -IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+ + ++ D + +++VP G +IGKGG ++ + ++ A +++ +
Sbjct: 163 ILQPQTTVNPDRVKQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD- 216
Query: 183 PLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
++ E ++ ++GEP RKA+ I ++ E+P S L + S SNI S V S
Sbjct: 217 ---GINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI-SYSNI--SGPVANSN 270
Query: 242 PLVGSYGN 249
P Y N
Sbjct: 271 PTGSPYAN 278
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 77 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 135
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
+ I +R P+ ++KTE S D V +++VP++ G +IG+GG
Sbjct: 136 ALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGG 195
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 196 ATVKAVMEQSGAWVQL 211
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 34/233 (14%)
Query: 45 VYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
V+R LC ++G +IG+ G+ V+ + +ET + +++ + C ER V I++ +
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 105 DSGEFVSPAQDALFRVHDRIVAED-----------------------SLADDEFGELTL- 140
+ + R V ED + + G T
Sbjct: 77 TCAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAH 136
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETR-AQIRILKDEHLPLCALSFDELLQVAGEP 199
+T+R+LVPA Q G +IGKGG+ IQ +R A + + + +P CA S D ++++ G+P
Sbjct: 137 VTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGKP 196
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
VR A + L + +L+ SS YQ + ++AP + G+ A
Sbjct: 197 KDVRVAADAVFESLKD------YLVDSSVLGHYQPT---VAAPAGANVGDVGA 240
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 37/177 (20%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
R++C +GG+IG+ G ++ I E+GA +KV +S A + + I + P T
Sbjct: 18 FRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGDT 77
Query: 324 ITA------ALRLQPRCSEKTERESGDPV------------------------------I 347
A +R R TE E +
Sbjct: 78 CAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAHV 137
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRS-ATRASIRILTNENVPKVAYEDEEMVQITG 403
T R+LVP+ Q G LIG+GG I E+R A A + + VP A ++ +V+I G
Sbjct: 138 TLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHG 194
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 176/400 (44%), Gaps = 65/400 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG
Sbjct: 172 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGC- 230
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 231 ---------SAACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 274
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE---- 215
++ + TET+ I L+D L + + + V G KA +I ++ E
Sbjct: 275 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGSIENCCKAEQEIMKKVREAYEN 330
Query: 216 ---NPSRSQHL----------LLSSSSNIY--QSSGVYLSAPLVGSYGNYSARRDEASAR 260
S HL L +SSN S V +AP Y ++ E
Sbjct: 331 DVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAP----YSSFMPPEQE---- 382
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
++ + PA +G +IGK G IKQ+ + + ASIK+ + + T P
Sbjct: 383 --TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----PP 436
Query: 321 SPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A
Sbjct: 437 EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAE 496
Query: 380 IRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
+ ++ + P E+E+ +V+I G +S ++Q +R
Sbjct: 497 V-VVPRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 530
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++TV+ ++ P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 381 QETVHVFI-PAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 439
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 440 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 483
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 484 KTVNELQNLTAAEVVVPRDQ 503
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 44/281 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ + S
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMV---SGAI 92
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
N E + + L ++ + +ED D++ T VR++VP G +IGKGG
Sbjct: 93 N------EVLRAVELILSKLLSELHSED---DNDVEPKT--KVRLIVPNGSCGGIIGKGG 141
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++ E++A I+I ++ D ++ V G + + I S+L E+P S
Sbjct: 142 ATIRSFIEESQAGIKISPQDNSYYG--QNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYS 199
Query: 221 QHLLLSSSSNIYQSSGVYLS--------------APLVGSYGNY------SARRDEASAR 260
+ S+ + SG Y+S AP + NY + ++ R
Sbjct: 200 HSM-----SSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAKFQNSKEDR 254
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S+ + +IG V+G+GG I I Q SGA IK+ G
Sbjct: 255 SNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDRG 295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 19/152 (12%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
+R + G VIGKGG I + +SGA I++ + F T + S
Sbjct: 38 VRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNE------FFPGTTDRIIMVSGA 91
Query: 324 ITAALR-----LQPRCSEKTERESGD--PVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
I LR L SE + D P R++VP+ G +IG+GGA I +
Sbjct: 92 INEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEES 151
Query: 377 RASIRILTNENVPKVAY--EDEEMVQITGSLD 406
+A I+I +N +Y +++ +V +TG+LD
Sbjct: 152 QAGIKISPQDN----SYYGQNDRIVTVTGTLD 179
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 42/269 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
T Y P R +G IIGKGGE + ++SET ++ + G +R + + +
Sbjct: 144 TSEDYSVPDRMVGLIIGKGGEQIANIQSETGCKVQFAPDSAGMPDRPCQLMGTPQA---- 199
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
++ A+ + R+ I L D+ G+ T++ V +P +++G VIGKGG+ I
Sbjct: 200 ------IAEAKKTIERI---IQKGQGLPDNFGGDQTMLEV--FIPGNKVGLVIGKGGETI 248
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
++++ + ++ +++D +LP + D+ L++ G +KA + + E
Sbjct: 249 KHLQEQAGVKMVMIQDSNLP---SNQDKPLRITGSIQACQKAKELVMDLIAEKDMGGGGG 305
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
D ++ + P +G VIG+GG +
Sbjct: 306 GGGGYG------------------------GDYGGGGRNAMEIPVPRSMVGVVIGRGGEM 341
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFIS 312
IK+I+ E+GA ++ + +G + + I+
Sbjct: 342 IKKIQAETGAKVQFKTDDGQGPNRMCTIN 370
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE--TVPGCDERIVTIYSS 96
G + T+ P K+G +IGKGGE +K L+ + + + + +P ++ + I S
Sbjct: 221 FGGDQTMLEVFIPGNKVGLVIGKGGETIKHLQEQAGVKMVMIQDSNLPSNQDKPLRITGS 280
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI--------TVRMLVP 148
+ Q A V D I +D G + + VP
Sbjct: 281 -------------IQACQKAKELVMDLIAEKDMGGGGGGGGGYGGDYGGGGRNAMEIPVP 327
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
+G VIG+GG++I+ I+ ET A+++ D+ + + + G V+ A
Sbjct: 328 RSMVGVVIGRGGEMIKKIQAETGAKVQFKTDD-----GQGPNRMCTINGPQDKVQNASCM 382
Query: 209 IASRLHE--NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
I + N + + G + G+ G + +
Sbjct: 383 IRELIDTAMNDRGRGRGGGGRGGGMDFNGGSGGNGRDYGNGGGGGGSYGGGGSGQDETMF 442
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
PA G VIGKGG I++I ++SGA +++D
Sbjct: 443 AVPAEKCGLVIGKGGETIREINRQSGAHVELD 474
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G +IGKGG I I+ E+G ++ DS+G C + + T + + TI R+
Sbjct: 155 VGLIIGKGGEQIANIQSETGCKVQFAPDSAGMPDRPCQL-MGTPQAIAEAKKTIE---RI 210
Query: 331 QPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPK 390
+ + GD + + +P ++G +IG+GG I ++ + ++ + N+P
Sbjct: 211 IQKGQGLPDNFGGDQTML-EVFIPGNKVGLVIGKGGETIKHLQEQAGVKMVMIQDSNLPS 269
Query: 391 VAYEDEEMVQITGSLDVASSA 411
++ ++ITGS+ A
Sbjct: 270 ---NQDKPLRITGSIQACQKA 287
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 239 LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
+ +P+ G G YS +E +R++ P+ +G +IGK G I I Q+S A ++V+
Sbjct: 172 MRSPMAGPGGYYSGHVGHPPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVN 231
Query: 299 SSGAEG-------DDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG------DP 345
A G D I T E I + LQ T +G D
Sbjct: 232 KKNAGGIFADGQVDKVINIHGTNEACSQACKRILEVM-LQESQQPATNTMNGGTSRRRDE 290
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
IT R+L + +G +IGR G +I ++ T A I NV ++ E ++ I G+L
Sbjct: 291 PITLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKI------NVSQMTDPRERVIVIRGNL 344
Query: 406 DVASSALSQVTLRLR 420
+ S A Q+T ++R
Sbjct: 345 EEMSKAQQQITSKMR 359
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL-SFDELLQVAGEP 199
+ VRMLVP++ +G +IGK G I +I +++A++ + K + A D+++ + G
Sbjct: 195 LPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDKVINIHG-- 252
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSY-GNYSARRDEAS 258
+A Q R+ E ++L S P + G S RRDE
Sbjct: 253 --TNEACSQACKRILE-------VMLQESQQ-----------PATNTMNGGTSRRRDEP- 291
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFE 318
+LRL+ +G VIG+ G +IK+I +E+ A I V + I+ E
Sbjct: 292 ---ITLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKINVSQMTDPRERVIVIRGNLEEMS 348
Query: 319 DPSPTITAALRLQPRCSEK 337
IT+ +R +C E+
Sbjct: 349 KAQQQITSKMR---QCYEQ 364
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 33/265 (12%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T + L GS+IGKGG + +S++ + I++S E PG +RI+ I
Sbjct: 35 TYIKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGG---- 90
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ A AL + ++++E D + E + VR++VP + G +IGKGG
Sbjct: 91 ---------IDDALKALELIIAKLLSEIPTEDGDDAEPRM-RVRLVVPNNACGSIIGKGG 140
Query: 161 QVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
+I++ E+ A I+I L + L L D L+ + G A+ I S+L ++
Sbjct: 141 SIIKSFIEESHAGIKISPLDTDFLGLT----DRLVAITGTLEEQMHAIDLILSKLTDDTH 196
Query: 219 RSQ--HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
Q H LS ++ Y S+ L+ V N R + S+ + +IG V
Sbjct: 197 YLQNMHAPLSYAA-AYNSTNHGLNGAGVKFQHNKEDRTN-------SVTIGVADEHIGLV 248
Query: 277 IGKGGGIIKQIRQESGASIKVDSSG 301
+G+GG I +I Q SGA IK+ G
Sbjct: 249 VGRGGRNIMEISQNSGARIKISDRG 273
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFISTKEFFED 319
++L+ G VIGKGG I + +SGA I++ S E D II IS +D
Sbjct: 37 IKLLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SKNYEFFPGTSDRIILISGG--IDD 93
Query: 320 PSPTITAALRLQPRCSEKTERESGD---PVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ A + + + E GD P + R++VP+ G +IG+GG+II +
Sbjct: 94 ---ALKALELIIAKLLSEIPTEDGDDAEPRMRVRLVVPNNACGSIIGKGGSIIKSFIEES 150
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
A I+I + + + D +V ITG+L+ A+ + +L +T
Sbjct: 151 HAGIKI-SPLDTDFLGLTD-RLVAITGTLEEQMHAIDLILSKLTDDT 195
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 169/393 (43%), Gaps = 94/393 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTI------------- 99
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
S D++ R + IVA+ L + G +++ +++L+ +Q+G +IG+
Sbjct: 100 ----SGGCDSISRAYS-IVAKALLEGAPQMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQ 154
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P ++KA+ +I L ++ +R
Sbjct: 155 GLKIKHIQDVSGVRM-VAQKEMLPQ---STERIVEVQGNPEGIQKAVWEICKCLVDDWAR 210
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLV----GSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
+G L P+V G G S GN+GG
Sbjct: 211 G--------------TGTVLYNPVVRTQTGGSGGMSQ------------------GNLGG 238
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCS 335
G+ G + +R +GA S GA + S + AA R P
Sbjct: 239 T-GREYGSSRVMRTGNGADF---SEGA-----------PRSYNRRSDS-DAAQRGPP--- 279
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
T E+G+ + T I +PS +GC+IGR G+ ISE+R + A I I K +++
Sbjct: 280 --THDENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISI------AKSPHDE 331
Query: 396 --EEMVQITGSLDVASSALSQVTLRLRANTFER 426
E M I G+ SAL + L A R
Sbjct: 332 TGERMFTIMGTAKANDSALYLLYENLEAEKQRR 364
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 46/262 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
F++ + + A A+ +T+R+++PA Q G +IGK G I+ I
Sbjct: 77 SMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 167 RTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
R I L L LS ++ V G+ V A V
Sbjct: 128 RESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------------- 170
Query: 225 LSSSSNIYQSSG--VYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
+ + Q SG V ++P V + +A + S++EF + P IG VIG+ G
Sbjct: 171 ----TKLQQLSGHAVPFASPSVVPGLDPAA---QTSSQEF----LVPNDLIGCVIGRQGS 219
Query: 283 IIKQIRQESGASIKVDSSGAEG 304
I +IRQ SGA IK+ + AEG
Sbjct: 220 KISEIRQMSGAHIKIGNQ-AEG 240
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + + T +LQ S DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPAAQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 70 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 129
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 130 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 184
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 185 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 240
Query: 220 SQHLLLS 226
S L +S
Sbjct: 241 SSCLNIS 247
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 66 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 125
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 126 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 180
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 181 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 235
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 121/265 (45%), Gaps = 45/265 (16%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGKGG V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNV------------SGPL-----DAV 157
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F + ++ +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 158 SKAFGLIVRR--INDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGA 215
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + LL V+G + A I + L E R + SS+ + Y
Sbjct: 216 RLNASEG----MLPGSTERLLSVSGVADAIHIATYYIGNILIEANER----MPSSNHSTY 267
Query: 233 QSSGVYLSAPLVGS-------------YGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+ + P +GS ++ ++ + ++ P +G +IGK
Sbjct: 268 RPTSQSRRPPYMGSSYVPGYAPAAAAAATAHNPYAGGPPSQLQTQQIYIPNDLVGCIIGK 327
Query: 280 GGGIIKQIRQESGASIKVDSSGAEG 304
GG I +IR S + IK+ GA G
Sbjct: 328 GGAKINEIRHMSASQIKIMEPGAVG 352
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 101/213 (47%), Gaps = 37/213 (17%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 180 GSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGVAD 239
Query: 99 GT--------NLFEDSGEFVSPAQDALFRV-----------------HDRIVAEDSLADD 133
N+ ++ E + + + +R + A + A +
Sbjct: 240 AIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYMGSSYVPGYAPAAAAAATAHN 299
Query: 134 EFG---ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL-------P 183
+ L T ++ +P D +GC+IGKGG I IR + +QI+I++ + P
Sbjct: 300 PYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAP 359
Query: 184 LCALSFDE-LLQVAGEPAVVRKALVQIASRLHE 215
A S E L+ + G+PA ++ A+ + SRL +
Sbjct: 360 APAGSEGERLVVITGQPANIQMAVQLLYSRLEQ 392
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPR-- 333
+IGKGG + +IR++SGA + V S + I+ +S P ++ A L R
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVS------GPLDAVSKAFGLIVRRI 168
Query: 334 CSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
E ++ S G +T + ++P++++G +IG+GG I E++ A+ A +
Sbjct: 169 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARL 217
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL--------TNENVPKVAYEDEEMV 399
T +I +P+ +GC+IG+GGA I+E+R + + I+I+ N E E +V
Sbjct: 311 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGSEGERLV 370
Query: 400 QITGSLDVASSALSQVTLRLRANTFERE 427
ITG A Q+ ++L + E+E
Sbjct: 371 VITG-----QPANIQMAVQLLYSRLEQE 393
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
I R L+ + +IG+GG+ ++E+R + A R++ +E++P E ++ ++G LD
Sbjct: 101 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPG---NPERILNVSGPLD 155
Query: 407 VASSALSQVTLRLRANTFER 426
S A + R+ F++
Sbjct: 156 AVSKAFGLIVRRINDEPFDK 175
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 38/248 (15%)
Query: 25 SKRRNPGDETEQRGIG----SEDTV---------YRYLCPLRKIGSIIGKGGEIVKQLRS 71
+KR N GD Q I S D V + L P GSIIGKGG+ + QL+
Sbjct: 31 TKRTNTGDRCNQAAIHDPPFSSDIVGFHEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK 90
Query: 72 ETKSNIRISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR----- 123
ET + I++S++ PG ER+ I + E N D F++ + + +
Sbjct: 91 ETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNVHD---FIAEKVREMPQSAQKTEPVS 147
Query: 124 -IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+ + ++ D + +++VP G +IGKGG ++ + ++ A +++ +
Sbjct: 148 ILQPQTTVNPDRVKQ-----AKLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD- 201
Query: 183 PLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
++ E ++ ++GEP RKA+ I ++ E+P S L + S SNI S V S
Sbjct: 202 ---GINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNI-SYSNI--SGPVANSN 255
Query: 242 PLVGSYGN 249
P Y N
Sbjct: 256 PTGSPYAN 263
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 120
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
+ I +R P+ ++KTE S D V +++VP++ G +IG+GG
Sbjct: 121 ALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIGKGG 180
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 181 ATVKAVMEQSGAWVQL 196
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 21/176 (11%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 29 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 84
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 85 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 133
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P +
Sbjct: 134 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPK 185
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
DR+ D+ ++E +T+RML+ ++G +IGK G+ ++ IR ++ A+I I +
Sbjct: 8 DRMSGSDAGLEEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI-SEGS 66
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
P + + + G A V A+ IA +L E+ +A
Sbjct: 67 CP------ERITTITGSTAAVFHAVSMIAFKLDED---------------------LCAA 99
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P G GN S +LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 100 PANG--GNV-------SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 146
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 27 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 86
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 87 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 143
Query: 380 IRI 382
+++
Sbjct: 144 VQV 146
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 42/242 (17%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
+G IIG+GGE + ++++E+ I+I+ G ER + + E + A+
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPES----------IEQAK 51
Query: 115 DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQI 174
L ++ DR +D G T+ +L+PA ++G VIGKGG+ I+ ++ T ++
Sbjct: 52 RLLGQIVDRCRNGPGFHNDIDGNSTI--QELLIPASKVGLVIGKGGETIKQLQERTGVKM 109
Query: 175 RILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQS 234
+++D LP A D+ L++ G+P V++A + + E
Sbjct: 110 VMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIREKD----------------- 149
Query: 235 SGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGAS 294
A G G++++R A S+ + P +G VIG+ G +IK+I+ ++G
Sbjct: 150 -----QADFRGVRGDFASR-----AGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVR 199
Query: 295 IK 296
I+
Sbjct: 200 IQ 201
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 120/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 62 RNGPGFHND---IDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 118
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D ++
Sbjct: 119 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFASRAGGGSI 169
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 170 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 224
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E L+ ++ G+ ++ G++S +E +
Sbjct: 225 HA----AHIINE--------LILTAQERDGLGGLAVARGRGRGRGDWSV-GTPGGVQEIT 271
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 272 YTV--PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 319
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 19/139 (13%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G +IG+GG I +I+ ESG I++ +SSG C++ T E +I A RL
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVL-TGTPE-------SIEQAKRL 53
Query: 331 QPRCSEKTERESG-----DPVITTR-ILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
+ ++ G D T + +L+P++++G +IG+GG I +++ T + ++
Sbjct: 54 LGQIVDRCRNGPGFHNDIDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQ 113
Query: 385 NENVPKVAYEDEEMVQITG 403
+ +P A ++ ++ITG
Sbjct: 114 DGPLPTGA---DKPLRITG 129
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 64/291 (21%)
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPAVVRKA--- 205
+G +IG+GG+ I I+ E+ +I+I + +P C L+ G P + +A
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT--------GTPESIEQAKRL 53
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
L QI R P H + +S I +
Sbjct: 54 LGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------------------- 79
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFISTKEF-FEDPSP 322
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I+ F +
Sbjct: 80 LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQARE 139
Query: 323 TITAALRLQPRCSEKTERESGDPVI-----TTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ +R + + + R GD + + VP +G +IGR G +I ++++
Sbjct: 140 MVLEIIREKDQADFRGVR--GDFASRAGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAG 197
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
I+ ++ + E Q+ G D A + + L ER+G
Sbjct: 198 VRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHIINELILTAQERDG 242
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHSDAEGNSTVQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ ++ +++D LP D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERAGVKMVMIQDGPLP---TGTDKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 230 EIVREK----------------------EQADFRGVRGDFSSRLAGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 113/274 (41%), Gaps = 35/274 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG ++ G TV L P K+G +IGKGGE +KQL+ + + + P
Sbjct: 149 RNGPGFHSDAEG---NSTVQEILIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E V + A FR + D L ++
Sbjct: 206 TGTDKPLRITGDPFKVQQAREMVLEIVREKEQADFR---------GVRGDFSSRLAGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GVSPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I + L +L + + + S V N A +E +
Sbjct: 312 HA-AHIINEL---------ILTAQERDGFGSLAVARGRGRGRGDWNVGA---PGGVQEIT 358
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I Q+SGA +++
Sbjct: 359 YTV--PADKCGLVIGKGGENIKSINQQSGAHVEL 390
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 122/305 (40%), Gaps = 68/305 (22%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P G +S
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGP------------------------------GFHSDA 158
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ +E ++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 159 EGNSTVQE----ILIPASKVGLVIGKGGETIKQLQERAGVKMVMIQDGPLPTGTDKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVITTRIL-------VPSAQIGCLIG 363
+ F + + +R + + + R GD ++R+ VP +G +IG
Sbjct: 215 TGDPFKVQQAREMVLEIVREKEQADFRGVR--GD--FSSRLAGGSIEVSVPRFAVGIVIG 270
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANT 423
R G +I ++++ I+ ++ V E Q+ G D A + + L
Sbjct: 271 RNGEMIKKIQNDAGVRIQFKPDDGV-----SPERAAQVMGPPDRCQHA-AHIINELILTA 324
Query: 424 FEREG 428
ER+G
Sbjct: 325 QERDG 329
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N
Sbjct: 133 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + +++VP G +IGKGG
Sbjct: 193 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGG 247
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 248 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 303
Query: 220 SQHLLLS 226
S L +S
Sbjct: 304 SSCLNIS 310
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 129 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 188
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 189 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 243
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 244 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 298
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD 305
S G S + ++ S ++RL+ +G +IGK G I+ + R+ESGA I +
Sbjct: 9 SAGGASIKHEDPSV-TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPER 67
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGR 364
+ +T F S + + CS+ + + G I R++VP++Q G LIG+
Sbjct: 68 IVTVSGTTNAIF---SAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
G+ I E+R T SI++ +E +P E V ++GS + + + Q+ L +
Sbjct: 125 SGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 126/284 (44%), Gaps = 50/284 (17%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
T R+L GS+IGKGG + +S++ + I++S E PG +RI+ + S G
Sbjct: 35 TYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMV---SGGI 91
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ + E + + ++ I AED DE + VR++VP G +IGKGG
Sbjct: 92 DDVLKAVELI------IAKLLSEIPAEDG---DE--AEPRMRVRLVVPNSACGSIIGKGG 140
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSF---DELLQVAGEPAVVRKALVQIASRLHENP 217
+I++ E+ A I+I PL F D L+ V G A+ I S+L ++P
Sbjct: 141 SIIKSFIEESHAGIKIS-----PLDTKFFGLTDRLVTVTGTLEEQMHAIDLILSKLTDDP 195
Query: 218 SRSQHLLLSSSSNIYQSSGVYLSA----------PLVGSYGNYSARR-DEASAREF---- 262
SQ + + +GV+ S P V + S +A +F
Sbjct: 196 HYSQTMHAP-----FSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQHNK 250
Query: 263 -----SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
S+ + +IG V+G+GG I +I Q SGA +K+ G
Sbjct: 251 DDITNSVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKISDRG 294
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE----GDDCIIFISTKEFFEDP 320
R + G VIGKGG I + +SGA I++ S E D II +S +D
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIIMVSGG--IDD- 93
Query: 321 SPTITAALRLQPRCSEKTERESGD---PVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ A + + + E GD P + R++VP++ G +IG+GG+II +
Sbjct: 94 --VLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESH 151
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
A I+I + K + +V +TG+L+ A+ + +L
Sbjct: 152 AGIKISPLDT--KFFGLTDRLVTVTGTLEEQMHAIDLILSKL 191
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 150/374 (40%), Gaps = 82/374 (21%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L ++ G +IGKGG+ + +R++T +S+ VPG +R+ ++ + +
Sbjct: 27 LRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAVDHVA---- 82
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEF-----GELTLITVRMLVPADQIGCVIGKGG 160
A F R++ E L+D G T +VR+L+ + +G VIG+ G
Sbjct: 83 ----------AAFAEVARLLLETPLSDSSLPPPPVGAFT--SVRLLISHNLMGTVIGRSG 130
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ I+ E+ A++ + E LP S + ++++ G ++ A+++I L E+ R+
Sbjct: 131 AKIKQIQDESGARM-VASKEMLP---QSTERVVEIQGSVEAIKTAVLEIGKCLMEDWERN 186
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
+L Y + L G G + R S V P+ GG
Sbjct: 187 TGTVL------YHPGAAGDAGVLAGGLGAQTVTGGLGGIRRSS---VAPSFGFGG----- 232
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER 340
+ R SI S D DP+ LR Q
Sbjct: 233 -----ERRMSGRPSISAPSETRRVSDA------PPMVNDPN------LRTQ--------- 266
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEM 398
I +PS +GC+IGRGG I+E+R + + I ++ K +++ E M
Sbjct: 267 ---------NISIPSDMVGCIIGRGGTKITEIRRLSGSRI------SIAKAPHDETGERM 311
Query: 399 VQITGSLDVASSAL 412
I G+ D AL
Sbjct: 312 FTIVGTADATERAL 325
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 35/155 (22%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+++R LV + G +IGKGGQ I +IR +T + + K + D + V+G
Sbjct: 25 LSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSK-----VVPGVQDRVFSVSGAVD 79
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V A ++A L E P LS SS L P VG++
Sbjct: 80 HVAAAFAEVARLLLETP-------LSDSS---------LPPPPVGAF------------- 110
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
S+RL+ +G VIG+ G IKQI+ ESGA +
Sbjct: 111 -TSVRLLISHNLMGTVIGRSGAKIKQIQDESGARM 144
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
S +P ++ R LV + + G LIG+GG I+++R+ T +++ ++ VP V + + +
Sbjct: 20 SDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKT--NVKAGVSKVVPGV---QDRVFSV 74
Query: 402 TGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPYVPMSLDIT 447
+G++D ++A ++V RL T + +L PPV + + L I+
Sbjct: 75 SGAVDHVAAAFAEVA-RLLLETPLSDSSLPP-PPVGAFTSVRLLIS 118
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT VS
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVT-----------------VSG 73
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL-----TLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+A+F I + +F ++ T I +R++VPA Q G +IGK G I+ IR
Sbjct: 74 TTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIR 133
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
T I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 134 QTTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+ + R+ESGA I + + +T F S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF---S 80
Query: 322 PTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
+ + CS+ + + G I R++VP++Q G LIG+ G+ I E+R T SI
Sbjct: 81 AFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSI 140
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ +E +P E V ++GS + + + Q+ L +
Sbjct: 141 QV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 38/159 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G+++ R E+ A+I I D P + ++ V+G
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ A I + E S+ VG G
Sbjct: 77 AIFSAFTLITKKFEEWCSQFND---------------------VGKVGKT---------- 105
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+ +RL+ PA G +IGK G IK+IRQ +G SI+V S
Sbjct: 106 QIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVAS 144
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTVQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGIRSDFTSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I TV L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GIRSDFTSRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I + L +L + + + G+ ++ G++S +E +
Sbjct: 312 HA-AHIINEL---------ILTAQERDGF--GGLAVARGRGRGRGDWSMG-TPGGIQEIT 358
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + + T
Sbjct: 359 YTV--PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRVFT 406
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 120/304 (39%), Gaps = 66/304 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S + +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTVQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGIRSDFTSRMGGG---SIEVSVPRFAVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ I+ ++ + E Q+ G D A + + L
Sbjct: 272 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHIINELILTAQ 325
Query: 425 EREG 428
ER+G
Sbjct: 326 ERDG 329
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 19/214 (8%)
Query: 23 GGSKRRNPGDETEQRGI--GSEDTVY-RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI 79
G + + G E+ G+ G E + + L P GSIIGKGG+ + QL+ ET + I++
Sbjct: 93 GCDREKGVGVTPEKLGVTHGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 152
Query: 80 SET---VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADD 133
S++ PG ER+ + ++E N E V A+ + V + + + ++ D
Sbjct: 153 SKSKDFYPGTTERVCLVQGTAEALNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPD 212
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDEL 192
+ +++VP G +IGKGG ++ + ++ A +++ K E + L + +
Sbjct: 213 RAKQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERV 263
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP V KA+ I ++ E+P S L +S
Sbjct: 264 VTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 297
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 116 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 175
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 176 LNAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 230
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 231 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 285
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRL--HENPSRS 220
IR I L L LS ++ V G+ V A V +L H P S
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFAS 185
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++ G+ A + S++EF + P IG VIG+
Sbjct: 186 PSMV----------PGLDPGA--------------QTSSQEF----LVPNDLIGCVIGRQ 217
Query: 281 GGIIKQIRQESGASIKVDSSGAEG 304
G I +IRQ SGA IK+ + AEG
Sbjct: 218 GSKISEIRQMSGAHIKIGNQ-AEG 240
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQE--SGASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF--EDPSPTITAA--LRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + +T+A +LQ S DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 102/215 (47%), Gaps = 30/215 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 46 TKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 97
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADDEF 135
PG ER+ I + E N + F++ P + + ++ D
Sbjct: 98 FYPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRV 154
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQ 194
+ +++VP G +IGKGG ++ + ++ A +++ K E + L + ++
Sbjct: 155 KQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVT 205
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 206 ISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 240
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 15/146 (10%)
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGD 305
+ R + E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G
Sbjct: 46 TKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER 105
Query: 306 DCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSA 356
C+I T E I +R P+ ++KTE S D V +++VP++
Sbjct: 106 VCLIQ-GTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNS 164
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
G +IG+GGA + + + A +++
Sbjct: 165 TAGLIIGKGGATVKAVMEQSGAWVQL 190
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 161/347 (46%), Gaps = 42/347 (12%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P +G IIGKGGE +K+L ++ + + + + R + S++ + S
Sbjct: 128 VPKEAVGFIIGKGGETIKELSMKSGAYMEV-------ERRDIDASSANRLFRIQGISNHI 180
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
Q L +V +V + + G I + +P D++G +IG GGQ I+++ +
Sbjct: 181 QLAKQLILEKVAGVLVGQSVCSVTSVGS---IQSELWIPMDRVGVIIGIGGQTIKSLEEQ 237
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++ I + ++ + AL ++L+ + G+P V A + I + + PSR + L S
Sbjct: 238 SQTTIVVHNEK---VNALG-EKLVTIVGKPQEVHIAEMLI-QEIIQKPSRVMNATLYSPV 292
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ Q++ L +P + SY + ++ R + F P +IG +IGK G I+ ++
Sbjct: 293 -MGQTTYPGLVSPEL-SYLSRTSLRPMTNKTIF-----VPRKSIGMIIGKRGETIRDLQY 345
Query: 290 ESGASIKV----DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGD- 344
SGASI+V + S + II + E E A + +E ER GD
Sbjct: 346 RSGASIRVVPDNEVSVNTVERPIIVSGSLESVE------LAHNLINDIVNEGIERLGGDL 399
Query: 345 ---------PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
I+ RI +P+ ++G LIG+ G+ I E++ + A I++
Sbjct: 400 SESKTLYPSASISLRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQV 446
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 46/264 (17%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEGTNLFEDSG 107
P+ ++G IIG GG+ +K L ++++ I + +E V E++VTI + ++ E
Sbjct: 214 WIPMDRVGVIIGIGGQTIKSLEEQSQTTIVVHNEKVNALGEKLVTIVGKPQEVHIAEMLI 273
Query: 108 EFV--SPAQDALFRVHDRIVAEDS---LADDEFGELTLITVR------MLVPADQIGCVI 156
+ + P++ ++ ++ + + L E L+ ++R + VP IG +I
Sbjct: 274 QEIIQKPSRVMNATLYSPVMGQTTYPGLVSPELSYLSRTSLRPMTNKTIFVPRKSIGMII 333
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GK G+ I++++ + A IR++ D + + + + + V+G V A I ++E
Sbjct: 334 GKRGETIRDLQYRSGASIRVVPDNEVSVNTV--ERPIIVSGSLESVELAHNLINDIVNEG 391
Query: 217 PSRSQHLL---LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
R L LS S +Y S+ + SLR+ P +
Sbjct: 392 IER----LGGDLSESKTLYPSASI-------------------------SLRIQIPNDKV 422
Query: 274 GGVIGKGGGIIKQIRQESGASIKV 297
G +IGK G I++++Q SGA I+V
Sbjct: 423 GWLIGKSGSTIRELQQRSGARIQV 446
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 151/364 (41%), Gaps = 82/364 (22%)
Query: 61 KGGEIVKQLRSETKSNIRIS--ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALF 118
K E +KQ ET ++S E+V D RI ++ +S+ N F + +P + AL
Sbjct: 42 KRDESIKQTPPETTEQRQLSQKESVEYQDTRIESVETSN---NTFNRA----APDEVALN 94
Query: 119 RVHDRIVA----EDSLADDEFGELTLITVRM---LVPADQIGCVIGKGGQVIQNIRTETR 171
+ D V+ E S++ E GE ++M VP + +G +IGKGG+ I+ + ++
Sbjct: 95 KEGDNHVSMYKIEQSVSS-EMGE-NPDDIKMDFIEVPKEAVGFIIGKGGETIKELSMKSG 152
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
A + + E + A S + L ++ G S H+ L+ +
Sbjct: 153 AYMEV---ERRDIDASSANRLFRIQG---------------------ISNHIQLAKQLIL 188
Query: 232 YQSSGVYL--SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
+ +GV + S V S G+ + L P +G +IG GG IK + +
Sbjct: 189 EKVAGVLVGQSVCSVTSVGSIQS------------ELWIPMDRVGVIIGIGGQTIKSLEE 236
Query: 290 ESGASIKV--DSSGAEGDDCIIFIS-----------TKEFFEDPSPTITAALRLQPRCSE 336
+S +I V + A G+ + + +E + PS + A L P +
Sbjct: 237 QSQTTIVVHNEKVNALGEKLVTIVGKPQEVHIAEMLIQEIIQKPSRVMNATL-YSPVMGQ 295
Query: 337 KT------------ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILT 384
T R S P+ I VP IG +IG+ G I +++ + ASIR++
Sbjct: 296 TTYPGLVSPELSYLSRTSLRPMTNKTIFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVP 355
Query: 385 NENV 388
+ V
Sbjct: 356 DNEV 359
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 22/172 (12%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
P + IG IIGK GE ++ L+ + ++IR+ VP + + T+ E + S E
Sbjct: 323 FVPRKSIGMIIGKRGETIRDLQYRSGASIRV---VPDNEVSVNTV----ERPIIVSGSLE 375
Query: 109 FVSPAQDALFRVHDRIVAE--DSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQ 161
V A + + + IV E + L D TL I++R+ +P D++G +IGK G
Sbjct: 376 SVELAHNLI----NDIVNEGIERLGGDLSESKTLYPSASISLRIQIPNDKVGWLIGKSGS 431
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I+ ++ + A+I++ K + S + + G P V A IA +L
Sbjct: 432 TIRELQQRSGARIQVAKPSETDIHTRS----VTITGPPPFVEIAKQLIAEKL 479
>gi|432876388|ref|XP_004073024.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 634
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 147/372 (39%), Gaps = 96/372 (25%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P R +G IIG+GGE + +++ E+ I+I+ G ER ++ S E
Sbjct: 80 YKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLMERPCSLTGSPES-------- 131
Query: 108 EFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ A+ L ++ +R D G ++ ML+PA ++G VIG+GG I+ ++
Sbjct: 132 --IEQAKRLLVQIVERCRNGPGFHGDSEGGTSV--QEMLIPASKVGLVIGRGGDTIKQLQ 187
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
++ +++D +P A D+ L+++G+P V+ A + + E
Sbjct: 188 ERAGVKMMMIQDGPMPTGA---DKPLRISGDPYKVQAARELVLEVIREKD---------- 234
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR--EFSLRLVCPAGNIGGVIGKGGGIIK 285
G++ + R + R SL + P +G VIG+ G +IK
Sbjct: 235 --------------------GDFRSGRSDFGVRLGGTSLDVPVPRFAVGIVIGRNGEMIK 274
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP-RCSEKTE----- 339
+I+ ++G I+ + DD I SP A + QP RC
Sbjct: 275 KIQNDAGVRIQFKT-----DDGI------------SPERVAMVMGQPDRCQHAVHLINDL 317
Query: 340 -------------------RESGD-------PVITTRILVPSAQIGCLIGRGGAIISEMR 373
R GD P+ +P+ + G +IG+GG I +
Sbjct: 318 IQTAQERDGFGSSLRSGRVRGRGDWTMGSPGPLQEVTYTIPADKCGLVIGKGGETIKSIN 377
Query: 374 SATRASIRILTN 385
+ A + + N
Sbjct: 378 QQSGAHVELQRN 389
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 114/262 (43%), Gaps = 44/262 (16%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
+V L P K+G +IG+GG+ +KQL+ + + + P G D+ +
Sbjct: 161 SVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRI-------- 212
Query: 101 NLFEDSGE--FVSPAQDALFRVHDRIVAEDSLADDEFG-ELTLITVRMLVPADQIGCVIG 157
SG+ V A++ + V + +FG L ++ + VP +G VIG
Sbjct: 213 -----SGDPYKVQAARELVLEVIREKDGDFRSGRSDFGVRLGGTSLDVPVPRFAVGIVIG 267
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ G++I+ I+ + +I+ D+ +S + + V G+P + A+
Sbjct: 268 RNGEMIKKIQNDAGVRIQFKTDD-----GISPERVAMVMGQPDRCQHAV----------- 311
Query: 218 SRSQHLL--LSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
HL+ L ++ G L + V G+++ +E + + PA G
Sbjct: 312 ----HLINDLIQTAQERDGFGSSLRSGRVRGRGDWTMG-SPGPLQEVTYTI--PADKCGL 364
Query: 276 VIGKGGGIIKQIRQESGASIKV 297
VIGKGG IK I Q+SGA +++
Sbjct: 365 VIGKGGETIKSINQQSGAHVEL 386
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 63/265 (23%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL---CALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I D + C+L+
Sbjct: 75 VITEDYKVPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLMERPCSLT-------- 126
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A LVQI R P G +G+
Sbjct: 127 GSPESIEQAKRLLVQIVERCRNGP---------------------------GFHGDSEG- 158
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFI 311
S +E ++ PA +G VIG+GG IKQ+++ +G + + D G D + I
Sbjct: 159 --GTSVQE----MLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRI 212
Query: 312 STKEFFEDPSPTITA-ALRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLIG 363
S DP A L L+ + + SG R + VP +G +IG
Sbjct: 213 SG-----DPYKVQAARELVLEVIREKDGDFRSGRSDFGVRLGGTSLDVPVPRFAVGIVIG 267
Query: 364 RGGAIISEMRSATRASIRILTNENV 388
R G +I ++++ I+ T++ +
Sbjct: 268 RNGEMIKKIQNDAGVRIQFKTDDGI 292
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P +G +IG+GG I +I+ ESG I++ DS G C + S + +I
Sbjct: 82 VPDRMVGFIIGRGGEQITRIQLESGCKIQIAADSGGLMERPCSLTGSPE--------SIE 133
Query: 326 AALRLQPRCSEKT--------ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
A RL + E+ + E G V +L+P++++G +IGRGG I +++ R
Sbjct: 134 QAKRLLVQIVERCRNGPGFHGDSEGGTSV--QEMLIPASKVGLVIGRGGDTIKQLQE--R 189
Query: 378 ASIRILTNENVPKVAYEDEEM 398
A ++++ ++ P D+ +
Sbjct: 190 AGVKMMMIQDGPMPTGADKPL 210
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 178/395 (45%), Gaps = 52/395 (13%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ +TI S+ EGT
Sbjct: 195 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGT- 253
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A ++ + + D +F E I +++L + +G +IGK G+
Sbjct: 254 ---------SAACKSILEIMHK-----EAQDIKFTEE--IPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
++ I +T +I I + L L + + + V G KA +I ++ E+ +
Sbjct: 298 NLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCAKAEEEIMKKIRES---YE 352
Query: 222 HLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSAR-----RDEASAREFSLRLV 267
+ + S + + G+ L+A P G + G SA + E + ++ L
Sbjct: 353 NDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAMTPPYPQFEQQSETETVHLF 412
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAA 327
PA ++G +IGK G IKQ+ + +GASIK+ + A + I T P A
Sbjct: 413 IPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITG----PPEAQFKAQ 468
Query: 328 LRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI-------ISEMRSATRAS 379
R+ + E+ + V + I VPS G +IG+GG ++E+++ + A
Sbjct: 469 GRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTASTSAKPVNELQNLSSAE 528
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ ++ + P D+ +V+ITG ++ S+
Sbjct: 529 V-VVPRDQTPD--ENDQVVVKITGHFYACQASCSE 560
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 33/168 (19%)
Query: 60 GKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR 119
GK GE VK++R E+ + I ISE C ERI+T+ + +A+F+
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLAGPT-----------------NAIFK 62
Query: 120 VHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGKGGQVIQNIRTETR 171
I+ D L +D +T +T+R++VPA Q G +IGKGG I+ IR T
Sbjct: 63 AFAMII--DKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTG 120
Query: 172 AQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
AQ+++ D + S + + +AG P + + + QI + E+P +
Sbjct: 121 AQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPK 164
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 45/157 (28%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ GK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLM--------HGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 58
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ + S N +A AS
Sbjct: 59 AIFKAFAMIIDKLEED--------------------------ISSSMTNSTA----ASKP 88
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 89 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 125
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 278 GKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK 337
GK G +K++R+ESGA I + + T F+ + I L S
Sbjct: 22 GKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA-MIIDKLEEDISSSMT 80
Query: 338 TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ P +T R++VP++Q G LIG+GG I E+R +T A +++
Sbjct: 81 NSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 125
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 152/372 (40%), Gaps = 68/372 (18%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +ED + P + +G IIGKGGE + +++ E+ I+I+ G +R
Sbjct: 70 GSMVHQRALATED----FKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRP 125
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
T+ S E L A+ L + ++ D G ++ ++L+PA+
Sbjct: 126 CTLTGSPENIEL----------AKRLLNEIVEQCRYGPGFHCDMDGNGSI--QQILIPAN 173
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGK G+ I+ ++ T Q+ +++D+ LP A D+ L++ G+P V++A +
Sbjct: 174 KVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGA---DKPLRITGDPQKVQQARELVV 230
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
L+ ++ + + GS +L +V P
Sbjct: 231 K-----------LIRDKDQGDFRVGRADFGSKMGGS----------------TLDVVVPR 263
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL 330
+G +IG+ G +I++I+ ++G I+ DD I + A +
Sbjct: 264 FAVGIIIGRNGEMIRKIQNDAGVRIQFKQ-----DDGISPERVAQVMGQLDHCHHAVHII 318
Query: 331 QPRCSEKTERESGDP-----------------VITTRILVPSAQIGCLIGRGGAIISEMR 373
ER+ + VP+ + G +IG+GG I ++
Sbjct: 319 NELVQTAQERDGFGGVMGRRGRGDCNMGGSGGLQEVTYAVPADKCGLVIGKGGETIKNIK 378
Query: 374 SATRASIRILTN 385
+RA + + N
Sbjct: 379 EQSRAHVELQRN 390
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 37/273 (13%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC 86
R PG + G GS + + L P K+G +IGK GE +KQL+ T + + + P
Sbjct: 150 RYGPGFHCDMDGNGS---IQQILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDP-- 204
Query: 87 DERIVTIYSSSEGTNLFEDSGEFVSPAQDALFR-VHDRIVAEDSLADDEFG-ELTLITVR 144
+ + ++ + V A++ + + + D+ + + +FG ++ T+
Sbjct: 205 ------LPTGADKPLRITGDPQKVQQARELVVKLIRDKDQGDFRVGRADFGSKMGGSTLD 258
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
++VP +G +IG+ G++I+ I+ + +I+ +D+ +S + + QV G+
Sbjct: 259 VVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDD-----GISPERVAQVMGQLDHCHH 313
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A+ I + R + + +G G +
Sbjct: 314 AVHIINELVQTAQERDGFGGVMGRRGRGDCN--------MGGSGGLQ-----------EV 354
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
PA G VIGKGG IK I+++S A +++
Sbjct: 355 TYAVPADKCGLVIGKGGETIKNIKEQSRAHVEL 387
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 8/168 (4%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN-LFEDSG 107
+ P +G IIG+ GE++++++++ I+ + ER+ + + +
Sbjct: 260 VVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISPERVAQVMGQLDHCHHAVHIIN 319
Query: 108 EFVSPAQ--DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
E V AQ D V R D + G L V VPAD+ G VIGKGG+ I+N
Sbjct: 320 ELVQTAQERDGFGGVMGRRGRGDC---NMGGSGGLQEVTYAVPADKCGLVIGKGGETIKN 376
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
I+ ++RA + + ++ P + + G P + KA I R+
Sbjct: 377 IKEQSRAHVELQRNP--PPNTDPSVRIFSIRGTPQQLEKARQLIDERI 422
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 107/282 (37%), Gaps = 53/282 (18%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
L T VP +G +IGKGG+ I I+ E+ +I+I D D + G P
Sbjct: 78 LATEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIASDS-----GGMLDRPCTLTGSP 132
Query: 200 A---VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDE 256
+ ++ L +I + P H + + +I Q
Sbjct: 133 ENIELAKRLLNEIVEQCRYGPGF--HCDMDGNGSIQQ----------------------- 167
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGAS---IKVDSSGAEGDDCIIFIST 313
++ PA +G VIGK G IKQ+++ +G I+ D D +
Sbjct: 168 ---------ILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITGD 218
Query: 314 KEFFEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIIS 370
+ + + +R + + + R + T ++VP +G +IGR G +I
Sbjct: 219 PQKVQQARELVVKLIRDKDQGDFRVGRADFGSKMGGSTLDVVVPRFAVGIIIGRNGEMIR 278
Query: 371 EMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSAL 412
++++ I+ ++ + E + Q+ G LD A+
Sbjct: 279 KIQNDAGVRIQFKQDDGI-----SPERVAQVMGQLDHCHHAV 315
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 19/160 (11%)
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITA 326
P +G +IGKGG I +I+ ESG I++ DS G C + S + I
Sbjct: 86 PDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRPCTLTGSPE--------NIEL 137
Query: 327 ALRLQPRCSEKTERESGDPVIT------TRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
A RL E+ G +IL+P+ ++G +IG+ G I +++ T +
Sbjct: 138 AKRLLNEIVEQCRYGPGFHCDMDGNGSIQQILIPANKVGLVIGKKGETIKQLQERTGVQM 197
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
++ ++ +P A ++ ++ITG A V +R
Sbjct: 198 IMIQDDPLPTGA---DKPLRITGDPQKVQQARELVVKLIR 234
>gi|390335393|ref|XP_003724136.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 696
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 50/264 (18%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
L P + +G IIG+ G+ + L+SE+ NI+I+ +R VT+ + E
Sbjct: 129 LVPDKVVGLIIGRQGQQISSLQSESGCNIQIAPENGISGDRQVTLTGTPEA--------- 179
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRT 168
V A+ + + ++ ++ + +TV ML+PA ++G VIGKGG+ I+ +
Sbjct: 180 -VMHAKSLILDIVNKASQNEAEGN--------MTVDMLIPATKVGLVIGKGGETIKQL-- 228
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSS 228
+ +A +R++ + P+ A D+ L+++G+ + +A ++ S + EN + SS
Sbjct: 229 QEQAGVRMVMIQEGPV-ATGMDKPLRISGDSQKIEEAK-RLVSEVMENAKNNDR---SSG 283
Query: 229 SNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIR 288
N Y G + +D ++ P +G VIG+GG +IK+I+
Sbjct: 284 DNFYSRGGPH---------------KD----------VIVPKHAVGMVIGRGGDMIKRIQ 318
Query: 289 QESGASIKVDSSGAEGDDCIIFIS 312
+++ A ++ + + + I+
Sbjct: 319 EQTKARVQFKPGDRDAPERVALIT 342
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 124/294 (42%), Gaps = 65/294 (22%)
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
+ G L I +LVP +G +IG+ GQ I ++++E+ I+I P +S D
Sbjct: 116 NSMGGLGSINDELLVPDKVVGLIIGRQGQQISSLQSESGCNIQIA-----PENGISGDRQ 170
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
+ + G P V A I +++ A
Sbjct: 171 VTLTGTPEAVMHAKSLILDIVNK------------------------------------A 194
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIF 310
++EA ++ ++ PA +G VIGKGG IKQ+++++G + + G A G D +
Sbjct: 195 SQNEAEGN-MTVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQEGPVATGMDKPLR 253
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEK---TERESGDPVIT-----TRILVPSAQIGCLI 362
IS S I A RL E +R SGD + ++VP +G +I
Sbjct: 254 ISGD------SQKIEEAKRLVSEVMENAKNNDRSSGDNFYSRGGPHKDVIVPKHAVGMVI 307
Query: 363 GRGGAIISEMRSATRASIRILT-NENVPKVAYEDEEMVQITGSLDVASSALSQV 415
GRGG +I ++ T+A ++ + + P E + ITGS + S A S V
Sbjct: 308 GRGGDMIKRIQEQTKARVQFKPGDRDAP------ERVALITGSAESVSMAESMV 355
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 17 SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN 76
S+ N + R+ GD RG +D + P +G +IG+GG+++K+++ +TK+
Sbjct: 269 SEVMENAKNNDRSSGDNFYSRGGPHKDVI----VPKHAVGMVIGRGGDMIKRIQEQTKAR 324
Query: 77 IRISETVPGCDERIVTIYSSSEGTNLFE 104
++ ER+ I S+E ++ E
Sbjct: 325 VQFKPGDRDAPERVALITGSAESVSMAE 352
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 21/207 (10%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---V 83
R PG E+ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 2 RELPGSSAEEG-----EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFY 56
Query: 84 PGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTL 140
PG ER+ + ++E N E V A+ + V + + + ++ D + L
Sbjct: 57 PGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 116
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEP 199
I VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+GEP
Sbjct: 117 I-----VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEP 167
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLS 226
V KA+ I ++ E+P S L +S
Sbjct: 168 EQVHKAVSAIVQKVQEDPQSSSCLNIS 194
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 13 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 72
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 73 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 127
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 128 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 182
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + + T +LQ S + DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 118/262 (45%), Gaps = 46/262 (17%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
IR I L L LS ++ V G+ V A V ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQ 175
Query: 223 LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
L S V + P V + + S++EF + P IG VIG+ G
Sbjct: 176 L---------SSHAVPFATPSVVPGLDPG---TQTSSQEF----LVPNDLIGCVIGRQGS 219
Query: 283 IIKQIRQESGASIKVDSSGAEG 304
I +IRQ SGA IK+ + AEG
Sbjct: 220 KISEIRQMSGAHIKIGNQ-AEG 240
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 23/163 (14%)
Query: 19 AATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
A NGG+ R P R + P + GS+IGK G +K++R
Sbjct: 90 APANGGNVSRPP-------------VTLRLVIPASQCGSLIGKAGTKIKEIRESPPKGAT 136
Query: 79 ISETVPGCDERIVTIYSSSEGTNLFEDSGEF--VSPAQDALFR---VHDRIVAEDSLADD 133
I P V + S+++G F G++ V+PA+ + H A S+
Sbjct: 137 IPYH-PSLSLGTV-LLSANQG---FSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPG 191
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
+ LVP D IGCVIG+ G I IR + A I+I
Sbjct: 192 LDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ +L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI--QELLIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 173 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++++R A S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRSDFTSR-----AGGGSIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ +G I+
Sbjct: 263 FVVGIVIGRNGEMIKKIQNGTGVRIQ 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 115/290 (39%), Gaps = 35/290 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I T+ L P K+G +IGKGGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDGNSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR V D + G + +
Sbjct: 206 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG----VRSDFTSRAGGGSIEVSVP 261
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R +V G VIG+ G++I+ I+ T +I+ D+ +S + QV G P +
Sbjct: 262 RFVV-----GIVIGRNGEMIKKIQNGTGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A A ++E +Q + + G VG+ G
Sbjct: 312 HA----ARIINELILTAQEREILGGLTGTRGRGRGRGDWSVGTPGGIQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
+ PA G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 121/303 (39%), Gaps = 66/303 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 77 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 128
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 129 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDGNSTIQE-------------------- 166
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG--AEGDDCIIFI 311
L+ PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 167 ------------LLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 214
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ T R G + + VP +G +IGR
Sbjct: 215 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFTSRAGGG---SIEVSVPRFVVGIVIGR 271
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ T I+ ++ + E Q+ G D A +++ L
Sbjct: 272 NGEMIKKIQNGTGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-ARIINELILTAQ 325
Query: 425 ERE 427
ERE
Sbjct: 326 ERE 328
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT+ ++
Sbjct: 4 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGNT--------------- 46
Query: 113 AQDALFRVHDRIVAEDSLADDEF-----GELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
++F+ I + +F G IT+R++VPA Q G +IGKGG I+ IR
Sbjct: 47 --SSIFKAFTLICKKFEEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIR 104
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
T + E LP S + + ++G + + + I + E+P + +
Sbjct: 105 DVTGRLYVHVASEMLP---NSTERAVTISGTCDAITQCIYHICCVMLESPPKGATIPYRP 161
Query: 228 SSNI 231
N+
Sbjct: 162 KPNV 165
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G I+K+ R+ESGA I + + +T F+ + +
Sbjct: 6 VGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGNTSSIFKA---FTLICKKFEE 62
Query: 333 RCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKV 391
CS+ E G IT R++VP++Q G LIG+GG+ I E+R T + +E +P
Sbjct: 63 WCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIKEIRDVTGRLYVHVASEMLPN- 121
Query: 392 AYEDEEMVQITGSLDVASSALSQV 415
E V I+G+ D + + +
Sbjct: 122 --STERAVTISGTCDAITQCIYHI 143
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
M VP + IGC+IGKGG I IR + A IRI E S D + ++G P V
Sbjct: 282 MTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGSTDRTITISGNPDSVAL 339
Query: 205 A--LVQIASRLHE 215
A L+ ++ L +
Sbjct: 340 AQYLINMSVELQK 352
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 118/264 (44%), Gaps = 50/264 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRL--HENPSRS 220
IR I L L LS ++ V G+ V A V +L H P S
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++ G+ A + S++EF + P IG VIG+
Sbjct: 186 PSMV----------PGLDPGA--------------QTSSQEF----LVPNDLIGCVIGRQ 217
Query: 281 GGIIKQIRQESGASIKVDSSGAEG 304
G I +IRQ SGA IK+ + AEG
Sbjct: 218 GSKISEIRQMSGAHIKIGNQ-AEG 240
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + + T +LQ S DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
>gi|385302954|gb|EIF47057.1| rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 339
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 130/291 (44%), Gaps = 35/291 (12%)
Query: 33 ETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVT 92
E ++ IG YR L R+ G+IIG+ G+ + ++R++ +S+ V GC +RI+
Sbjct: 27 EDKEVDIGKTLITYRVLVSRREAGAIIGRNGDNITRIRNDNNVKAGVSKVVEGCIDRILI 86
Query: 93 IYSSSEGT-NLFEDSGEFVSPAQDALFR-VHDRIVAEDSLADDEFGELTLIT-------- 142
+ + N + V+ A R +++ SL E+ L +T
Sbjct: 87 VTGMVDNVPNALVSIAKSVAEANAETVRQANEKGTDPTSLITYEYFPLKPLTQRPGPNDP 146
Query: 143 -------VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
+R+L+P Q+G +IGKGG I+ I+ ++ K S + L+++
Sbjct: 147 EYAETLFLRLLIPNVQMGTLIGKGGSRIKGIQESCDVKMVASKG----YLENSTERLVEL 202
Query: 196 AGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
G VRKAL +I S+ LL + ++ Y + + SY R +
Sbjct: 203 LGREENVRKALAEI----------SRCLLCDFQGAV--TATFYTPSTSMPSY--RRRREN 248
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ +E ++ P IG +IG+ G I+++R+ S +I ++S +G +
Sbjct: 249 RTTGKELIRKISFPNEYIGALIGRRGSRIQEVRRSSNCAIAIESDSQBGSE 299
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 41/270 (15%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGE 198
TLIT R+LV + G +IG+ G I IR + + + K + D +L V G
Sbjct: 36 TLITYRVLVSRREAGAIIGRNGDNITRIRNDNNVKAGVSK-----VVEGCIDRILIVTGM 90
Query: 199 PAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
V ALV IA + E + ++ + ++ +S + + D
Sbjct: 91 VDNVPNALVSIAKSVAE--ANAETVRQANEKGTDPTSLITYEYFPLKPLTQRPGPNDPEY 148
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG----------------- 301
A LRL+ P +G +IGKGG IK I QES V S G
Sbjct: 149 AETLFLRLLIPNVQMGTLIGKGGSRIKGI-QESCDVKMVASKGYLENSTERLVELLGREE 207
Query: 302 ------AEGDDCIIFI---STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRIL 352
AE C++ + F PS ++ + R + R +G +I +I
Sbjct: 208 NVRKALAEISRCLLCDFQGAVTATFYTPSTSMPSYRR------RRENRTTGKELIR-KIS 260
Query: 353 VPSAQIGCLIGRGGAIISEMRSATRASIRI 382
P+ IG LIGR G+ I E+R ++ +I I
Sbjct: 261 FPNEYIGALIGRRGSRIQEVRRSSNCAIAI 290
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 29/142 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 28 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT-------- 77
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIG 157
+A+F+ I+ D L +D +T +T+R++VPA Q G +IG
Sbjct: 78 ---------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIG 126
Query: 158 KGGQVIQNIRTETRAQIRILKD 179
KGG I+ IR T AQ+++ D
Sbjct: 127 KGGCKIKEIRESTGAQVQVAGD 148
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 78
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 79 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 108
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 109 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 145
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + S G + I
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCPERIITLAGPTNAIFKAF 84
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 85 AMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 144
Query: 382 I 382
+
Sbjct: 145 V 145
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIV + R E+ + I IS+ C ERIVT+ ++ +F
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTSA--IF--------- 79
Query: 113 AQDALFRVHDRIVAEDSLADDEFGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTET 170
A F + + E ++ G++ T I +R++VPA Q G +IGK G I+ IR T
Sbjct: 80 ---AAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNT 136
Query: 171 RAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ E LP S + + ++G + + + QI + E+P R
Sbjct: 137 GCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G I+ + R+ESGA I + S G+ + + T
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCPERIVTVSGTTSAIFAAF 82
Query: 322 PTITAALRLQPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
IT + + CS+ + + G I R++VP++Q G LIG+ G+ I E+R T SI
Sbjct: 83 TLITK--KFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSI 140
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
++ +E +P E V ++GS + + + Q+ L +
Sbjct: 141 QV-ASEMLPN---STERAVTLSGSAEQITQCIYQICLVM 175
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 38/159 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+++ ++G +IGK G+++ R E+ A+I I D P + ++ V+G +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTS 76
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ A I + E S+ VG G
Sbjct: 77 AIFAAFTLITKKFEEWCSQFND---------------------VGKVGKT---------- 105
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+ +RL+ PA G +IGK G IK+IRQ +G SI+V S
Sbjct: 106 QIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVAS 144
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
+G R + P + GS+IGK G +K++R T +I++ SE +P ER VT+ S+
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 98 E 98
E
Sbjct: 162 E 162
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R+L + G+IIGKGG +K+LR + K+++ + ++ ER++TI G NL
Sbjct: 81 RFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDST--SPERVLTI-----GANL---- 129
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
G + D + ++ D +++ D E +R+LV Q GC+IG+ G I+ +
Sbjct: 130 GTALECVLDIIPKLEDYKNYKNNDFDCE--------MRLLVHQSQAGCIIGRAGFKIKEL 181
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
R T AQI++ C S + ++ + G+P +V + I L P + +
Sbjct: 182 RERTGAQIKVYSQ----CCPESTERVVAIGGKPKIVVDCIETIHDLLQTAPPKGPNQPYD 237
Query: 227 SSSNIYQSSGVYLSAPLVGSYGNYSA 252
+Y +V YG YSA
Sbjct: 238 P---------LYWDEFMVPDYGGYSA 254
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 25/196 (12%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFI 311
+R + LR + + N G +IGKGG IK++RQ+ AS+ V DS+ E ++ I
Sbjct: 69 KRRRGDGPKVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDSTSPER---VLTI 125
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISE 371
+ + L + P+ + ++ D R+LV +Q GC+IGR G I E
Sbjct: 126 GA-----NLGTALECVLDIIPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKE 180
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALA 431
+R T A I++ + + P+ E +V I G + + + L+
Sbjct: 181 LRERTGAQIKVYS-QCCPEST---ERVVAIGGKPKIVVDCIETIHDLLQ----------T 226
Query: 432 AHP--PVLPYVPMSLD 445
A P P PY P+ D
Sbjct: 227 APPKGPNQPYDPLYWD 242
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 135 FG-ELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
FG E L + ++ +P D G +IGKGG IQ IR ++ AQI I DE LP S D ++
Sbjct: 464 FGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVI--DEGLP---GSNDRII 518
Query: 194 QVAGEPAVVRKALVQIASR 212
+ G ++ A + SR
Sbjct: 519 TITGTHEQIQSAQFLLQSR 537
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
G+IIGKGG ++++R ++ + I I E +PG ++RI+TI + E
Sbjct: 483 GAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHE 525
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 84/173 (48%), Gaps = 29/173 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 27 KEVGSIIGKKGETVKRIREQSCARITISEG--SCPERITTITGST--------------- 69
Query: 113 AQDALFRVHDRI---VAEDSLADDEFG---ELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
A+F I + ED G +T+R+++PA Q G +IGK G I+ I
Sbjct: 70 --GAVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEI 127
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
R T AQ+++ D L S + + V+G P + + QI + + E+P +
Sbjct: 128 RETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPK 176
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEGSCPERITTITGSTGAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 157/383 (40%), Gaps = 75/383 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI +
Sbjct: 53 RAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDA------- 105
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGGQVI 163
VS A A+ R + E + + G ++ +++L+ +Q+G VIG+ G I
Sbjct: 106 ---VSKAYAAVARS----LLEGAPSVGMGGVISANGTHPLKLLISHNQMGTVIGRQGLKI 158
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
++I+ + ++ + + E LP S + +++V G P + +A+ +I L ++ R
Sbjct: 159 KHIQDVSGVRM-VAQKEMLPQ---STERVVEVQGTPEGIERAVWEICKCLVDDWQRGTGT 214
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+L + + + G AP+ G NY R S+R V GN GG
Sbjct: 215 VLYNP--VVRGPG----APVSGGERNYPQERSYGSSR------VTRTGNGADFSSNSGGR 262
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
R +S AA R P T E+G
Sbjct: 263 AYNRRSDS---------------------------------DAASRGPP-----THDENG 284
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
+ + T I +P+ +GC+IGR G+ ISE+R + A I I + E M I G
Sbjct: 285 EEIQTQNISIPADMVGCIIGRAGSKISEIRKQSGARISIAKGPH----DESGERMFTIMG 340
Query: 404 SLDVASSALSQVTLRLRANTFER 426
S +AL + L A R
Sbjct: 341 SAKANETALYLLYENLEAEKTRR 363
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 36/164 (21%)
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
D+E+ + TL T+R +V + + G +IGKGGQ + N+R ET + + K + D
Sbjct: 42 DEEYSQTTL-TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK-----VVQGVHDR 95
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+L + G V KA +A L E AP VG G S
Sbjct: 96 VLTITGGCDAVSKAYAAVARSLLE------------------------GAPSVGMGGVIS 131
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
A L+L+ +G VIG+ G IK I+ SG +
Sbjct: 132 ANGT------HPLKLLISHNQMGTVIGRQGLKIKHIQDVSGVRM 169
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
DE GE + T + +PAD +GC+IG+ G I IR ++ A+I I K H S + +
Sbjct: 281 DENGE-EIQTQNISIPADMVGCIIGRAGSKISEIRKQSGARISIAKGPH----DESGERM 335
Query: 193 LQVAGEPAVVRKALVQIASRLH-ENPSRSQHLL 224
+ G AL + L E RSQ L
Sbjct: 336 FTIMGSAKANETALYLLYENLEAEKTRRSQQAL 368
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 185 GALVHQRTVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 240
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D T+ + L+PA
Sbjct: 241 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI--LIPAS 288
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIG+GG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 289 KVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 345
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++S+R S+ + P
Sbjct: 346 EIIREK----------------------DQADFRGVRGDFSSRMGGG-----SIEVSVPR 378
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 379 FAVGIVIGRNGEMIKKIQNDAGVRIQ 404
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I S T+ L P K+G +IG+GGE +KQL+ T + + + P
Sbjct: 265 RNGPGFHND---IDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLP 321
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + E E + A FR + D + ++
Sbjct: 322 TGADKPLRITGDPFKVQQAREMVLEIIREKDQADFR---------GVRGDFSSRMGGGSI 372
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 373 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 427
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I + L +L + + + G+ ++ G++S A
Sbjct: 428 HA-AHIINEL---------ILTAQERDGF--GGLAVARGRGRGRGDWSV---GAPGGVQE 472
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ PA G VIGKGG IK I Q+SGA +++ + D
Sbjct: 473 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 515
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 68/306 (22%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
T+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 192 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT------- 244
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P + +A L QI R P H + S+S I +
Sbjct: 245 -GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDSNSTIQE------------------- 282
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIF 310
++ PA +G VIG+GG IKQ+++ +G + + G G D +
Sbjct: 283 -------------ILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR 329
Query: 311 ISTKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLI 362
I+ F + + +R + + + R GD ++R + VP +G +I
Sbjct: 330 ITGDPFKVQQAREMVLEIIREKDQADFRGVR--GD--FSSRMGGGSIEVSVPRFAVGIVI 385
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
GR G +I ++++ A +RI + P E Q+ G D A + + L
Sbjct: 386 GRNGEMIKKIQN--DAGVRI---QFKPDDGISPERAAQVMGPPDRCQHA-AHIINELILT 439
Query: 423 TFEREG 428
ER+G
Sbjct: 440 AQERDG 445
>gi|353243541|emb|CCA75070.1| related to poly(rC)-binding protein 3 [Piriformospora indica DSM
11827]
Length = 631
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 69/358 (19%)
Query: 41 SEDTV-YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
++DT+ R L + G IIGK G+ V LR +T +S+ V G ER++++ S +G
Sbjct: 274 AQDTLTLRALVGTKDAGIIIGKAGKNVADLREQTGVKAGVSKVVAGVHERVLSVTGSVQG 333
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
V+ A + + + A T+I R+L+ + +G +IG+
Sbjct: 334 ----------VAKAYTTILQQLVTSSPSSTTAPANPSNHTII--RLLISHNLMGTIIGRN 381
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I+NI+ + A++ KD + S + +++V G P + KA+ +I L E+ R
Sbjct: 382 GLKIKNIQDSSGARMVAQKD----MLPQSTERIVEVQGSPEAIGKAIEEIGKCLLEDWER 437
Query: 220 SQHLLL--------SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAG 271
+L + +NI SA GSY N S SAR SL P+
Sbjct: 438 GLGTVLYQPGAGGPDAITNILAG-----SASRRGSYANPSVNALTESARRLSLVDFTPS- 491
Query: 272 NIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQ 331
V S+ + + S+ +P++ Q
Sbjct: 492 -------------------------VGSANSRSTNGSSAASSGATSSVVAPSV------Q 520
Query: 332 PRCSEKTERE-------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ S+ T SG P+ T I +PS +GC+IGR G I+E+R + + I I
Sbjct: 521 SQSSQATAIPPSNAPPGSGQPLRTQSISIPSDMVGCIIGRAGTKITEIRRLSGSKISI 578
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 43/200 (21%)
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
P +++ S IY + G Y SA + SAR S+ V A +IG V
Sbjct: 574 PEAPPSIIIPSDVPIYPAGGFYPSADSI------------VSAR--SVLPVLAAAHIGRV 619
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED-PSPTITAALRLQPRCS 335
IG+GG IK +R+ SGA ++VD + A+ D+C+I +++ E +D S + A L L+ + +
Sbjct: 620 IGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLRAKIN 679
Query: 336 EKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED 395
++ D ++T R+L TRA +RI +E PK A +
Sbjct: 680 DE-----DDDIVTIRLL----------------------RTRADVRISKSER-PKCADAN 711
Query: 396 EEMVQITGSLDVASSALSQV 415
+E++++ G + AL Q+
Sbjct: 712 DELIEVVGEIGSVRDALVQI 731
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 39/155 (25%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQ 114
IG +IG+GG +K +R + +++ + +T DE ++T+ S+ E + S A
Sbjct: 616 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST-------ESVDDLKSMAV 668
Query: 115 DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQI 174
+A+ + +I ED DD ++T+R+L TRA +
Sbjct: 669 EAVLLLRAKINDED---DD------IVTIRLL----------------------RTRADV 697
Query: 175 RILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
RI K E P CA + DEL++V GE VR ALVQI
Sbjct: 698 RISKSER-PKCADANDELIEVVGEIGSVRDALVQI 731
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 115/264 (43%), Gaps = 50/264 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 21 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAV 76
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQ 164
F++ + + A A G ++ +T+R+++PA Q G +IGK G I+
Sbjct: 77 SMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 165 NIRTETRAQIRILKDEHLPL--CALSFDELLQVAGEPAVVRKALVQIASRL--HENPSRS 220
IR I L L LS ++ V G+ V A V +L H P S
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
++ + S++EF + P IG VIG+
Sbjct: 186 PSMVPGLDPG------------------------TQTSSQEF----LVPNDLIGCVIGRQ 217
Query: 281 GGIIKQIRQESGASIKVDSSGAEG 304
G I +IRQ SGA IK+ + AEG
Sbjct: 218 GSKISEIRQMSGAHIKIGNQ-AEG 240
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 56/266 (21%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES--GASIKVDSSGAEGDDCII 309
+LRLV PA G +IGK G IK+IR+ GA+I S + G +
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRESPPKGATIPYHPSLSLGT---V 148
Query: 310 FISTKEFF----EDPSPTITAALRLQPRCSEKTERESG------DPVITT---RILVPSA 356
+S + F + + T +LQ S DP T LVP+
Sbjct: 149 LLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPND 208
Query: 357 QIGCLIGRGGAIISEMRSATRASIRI 382
IGC+IGR G+ ISE+R + A I+I
Sbjct: 209 LIGCVIGRQGSKISEIRQMSGAHIKI 234
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 307 CIIFISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIG 359
C + IS K+ + P P + LR+ R ++ + ES P V TR+LVP++Q G
Sbjct: 10 CPVMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAG 69
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG-SLDVASSALSQVTLR 418
LIG+ GA I ++ A++ +RIL E+VP VA D+ +V+I G LDV A+ +
Sbjct: 70 SLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDV-HKAVELIASH 126
Query: 419 LRANTFEREGALAAHPPVLPYVPMSLDITDGSK 451
LR +R VLP M + + + +
Sbjct: 127 LRKFLVDRS--------VLPLFEMQMKVHNAHR 151
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 110 VSPAQDALFRVHDRIV-AEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ PA D L RVH RI D +D + T+ R+LVPA Q G +IGK G I++I+
Sbjct: 24 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 83
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++ +RIL E +P ALS D ++++ GEP V KA+ IAS L
Sbjct: 84 DASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 127
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+ + RL+ + GGVIGKGG IK++R E A++ + S I +++E D
Sbjct: 8 QVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDSSGPDRVLQIVANSRENGLDI 67
Query: 321 SPTITAALRLQPRCSEKTERESGDPVITT-RILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+ +R + S ++ E+ DP TT +LV ++Q+G +IGRGG+ I E+R +T
Sbjct: 68 IKELIPLIREE--VSPFSDGEA-DPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQSTETK 124
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+++L E +P Y E VQI G+ D A+ ++
Sbjct: 125 VKVL-QECLP---YSTERRVQINGAPDAVLLAIGEI 156
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R L K G +IGKGG+ +K+LRSE + + I ++ G D R++ I ++S L
Sbjct: 11 FRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDS-SGPD-RVLQIVANSRENGL--- 65
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
D + + I E S D + T+ +LV Q+G +IG+GG I+
Sbjct: 66 ---------DIIKELIPLIREEVSPFSDGEADPYTTTLSVLVQTSQVGAIIGRGGSKIKE 116
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
+R T ++++L+ E LP S + +Q+ G P V A+ +I E P + LL
Sbjct: 117 LRQSTETKVKVLQ-ECLP---YSTERRVQINGAPDAVLLAIGEIYVTCSEAPIKGSVLLY 172
Query: 226 SSS 228
S
Sbjct: 173 DPS 175
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSS 97
G E T + P +G++IG+GGE ++ +RS +++ I I+ +P ++R++TI +
Sbjct: 260 GFAGEATTTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGTQ 319
Query: 98 E 98
E
Sbjct: 320 E 320
Score = 38.9 bits (89), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
GE T T ++ +P D +G VIG+GG+ I+NIR+ ++A+I I
Sbjct: 263 GEAT--TTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEI 301
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 165/406 (40%), Gaps = 78/406 (19%)
Query: 26 KRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG 85
+R N +TE+ S+ T+ R + ++ G IIGK G+ V LR ET +S+ V G
Sbjct: 29 ERENEQPKTEEDYAQSQLTL-RAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQG 87
Query: 86 CDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRM 145
+R++T+ T + S L ++ + ++ +R+
Sbjct: 88 VHDRVLTV------TGPLSGIAKAYSLVAKGLLEGAPQVGMGGVVQNN-----GTHPIRL 136
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
L+ +Q+G +IG+ G I++I+ + ++ + + E LP S + +++V G P + KA
Sbjct: 137 LISHNQMGTIIGRQGLKIKHIQDVSGVRM-VAQKEMLPQ---STERIVEVQGTPEGIDKA 192
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
+ +I L ++ R +L + + Q S PL + G
Sbjct: 193 VWEIGKCLVDDWQRGTGTVLYNPAVRVQVG----SGPLPPAVGGG--------------- 233
Query: 266 LVCPAGN--IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPT 323
PAGN IGG G S +GA+ + + + P
Sbjct: 234 --LPAGNNYIGG----------------GRSYNRTGNGADFSESRGYTRGNDLPRGGIPM 275
Query: 324 ITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
+T E G+ V T I +P+ +GC+IGRGG+ ISE+R + A I I
Sbjct: 276 VT---------------EDGEEVQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISI- 319
Query: 384 TNENVPKVAYED--EEMVQITGSLDVASSALSQVTLRLRANTFERE 427
K ++D E M I GS AL + L A R+
Sbjct: 320 -----AKAPHDDTGERMFTIMGSASANERALYLLYENLEAEKGRRQ 360
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G +
Sbjct: 285 TQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDD----TGERMFTIMGSASA 340
Query: 202 VRKALVQIASRLHENPSRSQHL 223
+AL + L R Q +
Sbjct: 341 NERALYLLYENLEAEKGRRQQV 362
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 97/195 (49%), Gaps = 20/195 (10%)
Query: 42 EDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSS 96
ED Y + L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + +
Sbjct: 66 EDGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT 125
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSL----ADDEFGELTLITVRMLVPADQI 152
+E N + F++ + + + +V +S+ +++VP
Sbjct: 126 AEALNAVHN---FIA---EKVREIPQSVVKPESVNILQPQTTMNPDRAKQAKVIVPNSTA 179
Query: 153 GCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
G +IGKGG ++ I ++ A +++ K E + L + ++ ++GEP + KA+ I
Sbjct: 180 GLIIGKGGATVKAIMEQSGAWVQLSQKPEGINLQ----ERVVTISGEPEQIHKAVDIIVQ 235
Query: 212 RLHENPSRSQHLLLS 226
++ E+P S L +S
Sbjct: 236 KIQEDPQSSSCLNIS 250
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 25/141 (17%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 69 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 128
Query: 310 ------FISTKEFFEDPSPTIT--AALRLQPRCSEKTERESGDPVITTRILVPSAQIGCL 361
FI+ K E P + + LQP+ + +R +++VP++ G +
Sbjct: 129 LNAVHNFIAEK-VREIPQSVVKPESVNILQPQTTMNPDRAK-----QAKVIVPNSTAGLI 182
Query: 362 IGRGGAIISEMRSATRASIRI 382
IG+GGA + + + A +++
Sbjct: 183 IGKGGATVKAIMEQSGAWVQL 203
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
D E GE L ++L+P+ G +IGKGGQ I ++ ET A I++ K + + +
Sbjct: 64 DMEDGEYFL---KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTER 118
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ V G + IA ++ E P Q ++ S NI Q +
Sbjct: 119 VCLVQGTAEALNAVHNFIAEKVREIP---QSVVKPESVNILQP--------------QTT 161
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
D A +++ P G +IGKGG +K I ++SGA +++
Sbjct: 162 MNPDRAK----QAKVIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 203
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 124 IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD-EHL 182
+VA LA ++ E T V + VP + +G ++GKGG+ + + T A+I+I K E +
Sbjct: 405 LVASSFLATEKLVESTKDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI 464
Query: 183 PLCALSFDELLQVAGEPAVVRKALVQIASRL 213
P + + + + G PA + A I+ R+
Sbjct: 465 P---GTRNRKVTITGTPAATQAAQYLISQRV 492
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 190/425 (44%), Gaps = 63/425 (14%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA-----PLVG----SYGNYSA-- 252
KA +I ++ E+ ++ + S + + G+ L+A P G + G SA
Sbjct: 338 KAEEEIMKKIRES---YENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSAIT 394
Query: 253 ---RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCII 309
+ E + ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A +
Sbjct: 395 PPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRM 454
Query: 310 FISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAI 368
I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 455 VIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKT 510
Query: 369 -------------ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV--ASSALS 413
++E+++ + A + ++ + P D+ +V+ITG AS L
Sbjct: 511 AIPLNVISVYLLQVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQASPLLL 567
Query: 414 QVTLR 418
QV R
Sbjct: 568 QVAQR 572
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAIMEQSGAWVQL 183
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAIMEQSGAWVQL 183
>gi|108862918|gb|ABG22073.1| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|215694782|dbj|BAG89973.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 355
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 110 VSPAQDALFRVHDRIV-AEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ PA D L RVH RI D +D + T+ R+LVPA Q G +IGK G I++I+
Sbjct: 12 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSIQ 71
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++ +RIL E +P ALS D ++++ GEP V KA+ IAS L
Sbjct: 72 DASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 115
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 19/150 (12%)
Query: 310 FISTKEFFEDP-SPTITAALRLQPRCSEKTERESGDP------VITTRILVPSAQIGCLI 362
IS K+ + P P + LR+ R ++ + ES P V TR+LVP++Q G LI
Sbjct: 1 MISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLI 60
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG-SLDVASSALSQVTLRLRA 421
G+ GA I ++ A++ +RIL E+VP VA D+ +V+I G LDV A+ + LR
Sbjct: 61 GKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDV-HKAVELIASHLRK 117
Query: 422 NTFEREGALAAHPPVLPYVPMSLDITDGSK 451
+R VLP M + + + +
Sbjct: 118 FLVDRS--------VLPLFEMQMKVHNAHR 139
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 47/274 (17%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L + G IIGKGG+ V +LR T +S+ VPG ER++TI S EG
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEG------ 56
Query: 106 SGEFVSPAQDALFRVHDRIVAE---DSLADDEFGELTLIT-----VRMLVPADQIGCVIG 157
+ + + I+A+ S E + T +R+LV + +G +IG
Sbjct: 57 -----------IAKAYQHIIAQLVSASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIG 105
Query: 158 KGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+GG I+ I+ + A++ KD + S + +++V G P + +A+ +I+ L E+
Sbjct: 106 RGGLKIKAIQDASGARLVAQKD----MLPQSTERVVEVHGVPDEIGRAIYEISKSLLEDW 161
Query: 218 SRSQHLLL--------------SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
R+ +L S+N + + S G+ S + S
Sbjct: 162 ERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQSTPNALIRTQNIS 221
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ P+ +G +IG+GG I +IR+ SG+ I +
Sbjct: 222 I----PSDMVGCIIGRGGTKITEIRRLSGSKISI 251
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSN-IRISETVPGCDERIVTIYSSSE--GT 100
T+ R L +G+IIG+GG +K ++ + + + + +P ER+V ++ + G
Sbjct: 89 TMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGR 148
Query: 101 NLFEDSGEFVSPAQ----DALFR----------------------VHDRIVAEDSLADDE 134
++E S + + L+ R ++ A +
Sbjct: 149 AIYEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQ 208
Query: 135 FGELTLI-TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
LI T + +P+D +GC+IG+GG I IR + ++I I K H + + +
Sbjct: 209 STPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKAPH----DETGERMF 264
Query: 194 QVAGEPAVVRKALVQIASRLHENPSR 219
+ G P KAL + ++L R
Sbjct: 265 TIVGSPEANEKALYLLYNQLESEKER 290
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 125/332 (37%), Gaps = 83/332 (25%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+ +R LV G +IGKGG+ + +R T + + K + + +L + G P
Sbjct: 1 MALRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSK-----VVPGVHERVLTINGSPE 55
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I ++L +S+S+ + L A +V A+
Sbjct: 56 GIAKAYQHIIAQL-----------VSASAGSPE-----LDASVV------------ATNP 87
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI------------KVDSSGAEGDDC- 307
+RL+ +G +IG+GG IK I+ SGA + +V D+
Sbjct: 88 HTMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIG 147
Query: 308 -IIFISTKEFFEDPSPTITAAL----------------------------RLQPRCSEKT 338
I+ +K ED L + P S +
Sbjct: 148 RAIYEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGS 207
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--E 396
+ + T I +PS +GC+IGRGG I+E+R + + I ++ K +++ E
Sbjct: 208 QSTPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKI------SIAKAPHDETGE 261
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFEREG 428
M I GS + AL + +L + R G
Sbjct: 262 RMFTIVGSPEANEKALYLLYNQLESEKERRVG 293
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 178/405 (43%), Gaps = 84/405 (20%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN--LFED 105
Y P + +G +IGKGG + IR+ + C ++ S++G E
Sbjct: 58 YPVPEKMVGLVIGKGG-----------TEIRLIQQTSACRVQMDADDQSNDGIRNCTIEG 106
Query: 106 SGEFVSPAQDALFRVHDR---IVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+ + V+ A+ + +V +R IV +S DDE +T +L+P+D+IG VIGKGG+
Sbjct: 107 TPDQVAIAKQMITQVINRNQGIVPTES-TDDE------VTEDILIPSDKIGLVIGKGGET 159
Query: 163 IQNIRTETRAQI-RILKDEHLPLCALSFDELLQVAGEPAVVR--KALV-QIASRLHENPS 218
I+ ++ ++ + +++D A + L+++G P V KALV I + + N S
Sbjct: 160 IRTVQEQSGLRTCNVVQDS---TSATGQPKPLRMSGTPTAVETAKALVTNIMNNIQGNIS 216
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
Q L S + Y AR + ++ P + G +IG
Sbjct: 217 MLQKSLHSDA---------------------YPARGE----------VIVPRLSAGMIIG 245
Query: 279 KGGGIIKQIRQESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSE 336
KGG +IK++ QE+G I K DS D + + ++E + IT +
Sbjct: 246 KGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAVIVGSREQIYRATERITEIVN------- 298
Query: 337 KTERESGDPVITTRIL---VPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAY 393
K + +G +I VP+++ G +IG+GG I ++ T A+ + +
Sbjct: 299 KAIKNNGVNPNGQQIFYLHVPASKCGLVIGKGGENIKQIERDTGATCGL---AGPAEQKN 355
Query: 394 EDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
+DE++ +I G+ A V +++ G +A + PV P
Sbjct: 356 DDEKVFEIKGTQFQIHHAAHLVKIKV--------GEIAPNTPVPP 392
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 157/390 (40%), Gaps = 91/390 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ +GT
Sbjct: 41 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGT------ 94
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
R + +VA+ L + G ++ VR+L+ +Q+G +IG+
Sbjct: 95 -----------ARAY-ALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQ 142
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P + KA+ +I L ++ R
Sbjct: 143 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 198
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLV-GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+G L P V S G ++ + +S R GN
Sbjct: 199 G--------------TGTILYNPAVRASVGGSTSMNTSSVGNGYSSRPYNRTGN------ 238
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
GA SG G S + + P +T
Sbjct: 239 -------------GADFSDGQSGGYGRRSNPDTSNRGY-----PLVT------------- 267
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--E 396
E G+ + T I +P+ +GC+IGRGG+ I+E+R ++ A I I K +++ E
Sbjct: 268 --EDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI------AKAPHDETGE 319
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFER 426
M I GS AL + L A R
Sbjct: 320 RMFTIMGSAQANEKALYLLYENLEAEKTRR 349
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G
Sbjct: 275 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPH----DETGERMFTIMGSAQA 330
Query: 202 VRKALVQIASRLHENPSRSQHL 223
KAL + L +R L
Sbjct: 331 NEKALYLLYENLEAEKTRRSQL 352
>gi|260797497|ref|XP_002593739.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
gi|229278967|gb|EEN49750.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
Length = 730
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 155/366 (42%), Gaps = 59/366 (16%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P + +G IIG+GGE + +L++E+ +++++ G ER+ T+ +
Sbjct: 115 YRVPDKMVGLIIGRGGEQITRLQAESGCKVQMAQDSGGLPERVCTLTGT----------- 163
Query: 108 EFVSPAQDALFRVHDRIVAE--DSLADDEFGELTL----ITVRMLVPADQIGCVIGKGGQ 161
P+ + R+ D+I+ + S A ++ G TL I M++P +++G VIGKGG+
Sbjct: 164 ---PPSIEHAKRLIDQIIEKGRSSGATEQPG-TTLPDGSIVTEMMIPGNKVGLVIGKGGE 219
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
I+++ + RA ++++ + P ++ L++ G+P ++A + + + +
Sbjct: 220 TIRSL--QERAGVKMVMIQDGPYMNAP-EKPLRITGDPQKTQRAKDLVMDLITD-----K 271
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
L + +Y + R + + P +G VIGKGG
Sbjct: 272 ELEVGEGEFFGGGPPGMRRGGRDFDTNDYGSARGGGGG---GMDIPVPRFAVGIVIGKGG 328
Query: 282 GIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERE 341
+IK+I+ ESG ++ + + + + P AA +Q + +R+
Sbjct: 329 EMIKKIQNESGVRVQFKPDDGQNPNRVC-----QLIGAPDRCQAAAHTIQNLVEDAQQRD 383
Query: 342 SG----------------------DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
P+ T VP+ + G +IG+GG I + + A
Sbjct: 384 QAGGGPGMGRGRGRGDWGRGPGGPGPMRTDEFPVPNNKCGLVIGKGGESIRTINQQSGAH 443
Query: 380 IRILTN 385
+ ++ N
Sbjct: 444 VELMRN 449
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P +G +IG+GG I +++ ESG +++ DS G C + + P+I
Sbjct: 117 VPDKMVGLIIGRGGEQITRLQAESGCKVQMAQDSGGLPERVCTLTGT--------PPSIE 168
Query: 326 AALRLQPRCSEKTERESG----------DPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
A RL + EK R SG D I T +++P ++G +IG+GG I ++
Sbjct: 169 HAKRLIDQIIEKG-RSSGATEQPGTTLPDGSIVTEMMIPGNKVGLVIGKGGETIRSLQE- 226
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITG 403
RA ++++ ++ P + E+ ++ITG
Sbjct: 227 -RAGVKMVMIQDGPYMNAP-EKPLRITG 252
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFISTK-EF 316
+ +L+++ + G VIGK G I I+ SGA +KV S+ D I+ IS K E
Sbjct: 35 QMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVET 94
Query: 317 FEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ + + + P + + V+T I++P+A G +IG+GG I+ +R T
Sbjct: 95 VLSAAKMVISEMYRDPNSGRVPDDV--NAVMTVSIVIPAAACGLVIGKGGEKINSLREET 152
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPV 436
+A I++ + V + +E +V I G+L A +A+ ++ + + R L
Sbjct: 153 QAKIQLQAKDKV-AIPGLNERIVTIQGTLPQAQTAVEKIVHLIHEDGNIRYENL------ 205
Query: 437 LPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPGRDSYGSYGG 482
G+ YG +G G Y G +P + + YGG
Sbjct: 206 ------------GTNYGMSGMMGKGLGQGYGMGMMPMQGAAAMYGG 239
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 26/212 (12%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPL---RKIGSIIGKGGEIVK 67
KR+H +++ + +KR+ GD GI S D L L + GS+IGK G +
Sbjct: 6 KRSHDEAEE-QDVLAKRQVTGD-----GISSGDETQMALKILIGNKSAGSVIGKAGATIN 59
Query: 68 QLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRI 124
++ + + +++S ET PG +RIV I E +S A+ + ++ R
Sbjct: 60 SIKDTSGAKVKVSSNSETFPGTADRIVLISGKVE---------TVLSAAKMVISEMY-RD 109
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
+ DD ++TV +++PA G VIGKGG+ I ++R ET+A+I++ + + +
Sbjct: 110 PNSGRVPDDVN---AVMTVSIVIPAAACGLVIGKGGEKINSLREETQAKIQLQAKDKVAI 166
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
L+ + ++ + G + A+ +I +HE+
Sbjct: 167 PGLN-ERIVTIQGTLPQAQTAVEKIVHLIHED 197
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 36 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 87
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 88 KDFYPGTTERVCLIQGTIEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 144
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 145 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 195
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 196 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 229
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTIE 106
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 107 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 166
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 167 ATVKAIMEQSGAWVQL 182
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 121/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 76 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 131
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + +PA
Sbjct: 132 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTVQEIP--IPAS 179
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+P V++A +
Sbjct: 180 KVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVL 236
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 237 EIIREK----------------------DQADFRGVRSDFSSRMGGG-----SIEVSVPR 269
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 270 FAVGIVIGRNGEMIKKIQNDAGVRIQ 295
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 112/275 (40%), Gaps = 41/275 (14%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
TV P K+G +IGKGGE +KQL+ T + + + P G D+ + +
Sbjct: 170 TVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 229
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + D + ++ + VP +G VIG+ G
Sbjct: 230 QAREMVLEIIREKDQADFR---------GVRSDFSSRMGGGSIEVSVPRFAVGIVIGRNG 280
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL--HENPS 218
++I+ I+ + +I+ D+ +S + QV G P + A I+ + + P
Sbjct: 281 EMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQHAAHVISELILTAQPPP 335
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ L+L ++ + SS + RD PA G VIG
Sbjct: 336 QRGKLVLEAAGKHHLSSAFF-------------QERDT---------YTVPADKCGLVIG 373
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
KGG IK I Q+SGA +++ + D + I T
Sbjct: 374 KGGENIKSINQQSGAHVELQRNPPPSTDPSLRIFT 408
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 66/307 (21%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 84 VITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-------- 135
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P G ++
Sbjct: 136 GTPESIEQAKRLLGQIVDRCRNGP------------------------------GFHNDV 165
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFI 311
++ +E + PA +G VIGKGG IKQ+++ +G + + G G D + I
Sbjct: 166 DGNSTVQEIPI----PASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRI 221
Query: 312 STKEF-FEDPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGR 364
+ F + + +R + + S+ + R G + + VP +G +IGR
Sbjct: 222 TGDPFKVQQAREMVLEIIREKDQADFRGVRSDFSSRMGGG---SIEVSVPRFAVGIVIGR 278
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT-LRLRANT 423
G +I ++++ I+ ++ + E Q+ G D A ++ L L A
Sbjct: 279 NGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHAAHVISELILTAQP 333
Query: 424 FEREGAL 430
+ G L
Sbjct: 334 PPQRGKL 340
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 118/266 (44%), Gaps = 45/266 (16%)
Query: 64 EIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDR 123
E VK++R ++ + I ISE C ERI TI S+ +F F++ +
Sbjct: 60 ETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHAVSMIA-------FKLDED 108
Query: 124 IVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
+ A A G ++ +T+R+++PA Q G +IGK G I+ IR T AQ+++ D
Sbjct: 109 LCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGD-- 162
Query: 182 LPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL----------LLSSSSNI 231
L S + + V+G P + + QI + + E+P + + +L S++
Sbjct: 163 --LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQG 220
Query: 232 YQSSGVY-------------LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ G Y LS V + S + S + P IG VIG
Sbjct: 221 FSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIG 280
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEG 304
+ G I +IRQ SGA IK+ + AEG
Sbjct: 281 RQGSKISEIRQMSGAHIKIGNQ-AEG 305
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRL-QPRCSEKTER-E 341
+K+IR++S A I + I ST F S A +L + C+
Sbjct: 62 VKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS---MIAFKLDEDLCAAPANGGN 118
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
P +T R+++P++Q G LIG+ G I E+R T A +++
Sbjct: 119 VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 159
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 39/199 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + S+E
Sbjct: 37 KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE----- 91
Query: 104 EDSGEFVSPAQDALFRVHDRIVAE-----DSLADDEFGEL----TLITV------RMLVP 148
+L VH+ I + ++ G L T I +++VP
Sbjct: 92 ------------SLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVP 139
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQ 208
G +IGKGG +++I E+ A +++ + P + ++ V+GEP+ V+KA+
Sbjct: 140 NTTAGLIIGKGGATVRSIMEESGAWVQLSQKPAGPNL---HERVVTVSGEPSQVQKAIRS 196
Query: 209 IASRLHENPSR-SQHLLLS 226
I + E+P + + HL +S
Sbjct: 197 IIHKSREDPPQGTTHLNIS 215
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAES 92
Query: 310 FISTKEFFEDPSPTITA-------ALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+S F + + + L P+ + ER +++VP+ G +I
Sbjct: 93 LLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAK-----QAKLIVPNTTAGLII 147
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P + E +V ++G A+ + + R
Sbjct: 148 GKGGATVRSIMEESGAWVQLSQKPAGPNL---HERVVTVSGEPSQVQKAIRSIIHKSR 202
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTIEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTIE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAIMEQSGAWVQL 183
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 29 NPGDETEQRGIGSEDTV---YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPG 85
NP D ++Q +G +DT+ R L ++G++IG+ G + Q+R E+ ++I
Sbjct: 6 NPYDNSQQDELG-DDTICVTIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKIKGNEKD 64
Query: 86 CDERIVTIYSSSEG-TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI--T 142
ERIV++ S G T GEFV E L D G T I T
Sbjct: 65 I-ERIVSVSGSPAGVTRAIGKVGEFV----------------EADLNDGLTGRTTKIPVT 107
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+ M+VP Q G +IGKGG I+ IR +T ++I + L S ++L+ + GEP V+
Sbjct: 108 LHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKIANE----LLPASTEKLITLYGEPRVI 163
Query: 203 RKALVQIASRLHE 215
++ + I + E
Sbjct: 164 QQCVGSICQVMIE 176
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-DCIIFISTKEFFEDPS 321
++RL+ +G +IG+ G I QIR+ESG +K+ G E D + I+ +S S
Sbjct: 24 TIRLLFKGNQVGTLIGRKGSKIMQIREESGCEVKI--KGNEKDIERIVSVSG-------S 74
Query: 322 PT-ITAALRLQPRCSEKTERESGDPV--------ITTRILVPSAQIGCLIGRGGAIISEM 372
P +T A+ + E E + D + +T ++VP+ Q G +IG+GG I E+
Sbjct: 75 PAGVTRAIG---KVGEFVEADLNDGLTGRTTKIPVTLHMIVPTGQCGSIIGKGGFRIKEI 131
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA 432
R T +++I NE +P E+++ + G V + + + ER+
Sbjct: 132 REKTGCNVKI-ANELLPA---STEKLITLYGEPRVIQQCVGSICQVMIEEGQERK----- 182
Query: 433 HPPVLPYVPMS 443
PY P S
Sbjct: 183 ---CTPYTPAS 190
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGTNLF 103
+ L P GSIIGKGG+ + QL+ ET + I+ VP G ER+ + ++E N
Sbjct: 136 KELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNAV 195
Query: 104 EDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E V A+ + V + + + ++ D + LI VP G +IGKGG
Sbjct: 196 HSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI-----VPNSTAGLIIGKGG 250
Query: 161 QVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + ++ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P
Sbjct: 251 ATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQS 306
Query: 220 SQHLLLS 226
S L +S
Sbjct: 307 SSCLNIS 313
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS-----SGAEGDDCII------ 309
E+ L+ + P+ G +IGKGG I Q+++E+GA+IK +G C++
Sbjct: 132 EYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEA 191
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 192 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 246
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 247 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 301
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 149/371 (40%), Gaps = 75/371 (20%)
Query: 37 RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
R I +ED + P + +G IIG+GGE + +++ E+ I+I+ G +R T+ +
Sbjct: 81 RAIITED----FKVPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGGMMDRPCTLTGT 136
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E + A+ L ++ DR G + + L+PA ++G VI
Sbjct: 137 PES----------IEQAKRLLGQIVDRCRNGPGFHSQMDGSSAVQEI--LIPASKVGLVI 184
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN 216
GKGG I+ ++ T ++ +++D+ +P + D+ L+++G+P V++A + + E
Sbjct: 185 GKGGDTIKQLQERTGVKMIMIQDDPMPTGS---DKPLRISGDPYKVQQARELVVEIIREK 241
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNY-SARRDEASAREFSLRLVCPAGNIGG 275
G++ S R D S S+ + P +G
Sbjct: 242 -----------------------------DQGDFRSGRSDFGSRLGSSIDVAVPRFAVGI 272
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCS 335
VIG+ G +IK+I+ ++G I+ DD I + P A +
Sbjct: 273 VIGRNGEMIKKIQNDAGVRIQFKP-----DDGISPDRVAQVMGQPERCQHAVHLINELVQ 327
Query: 336 EKTERES-------------------GDP--VITTRILVPSAQIGCLIGRGGAIISEMRS 374
ER+ G P + +P+ + G +IG+GG I +
Sbjct: 328 TAQERDGFGGPLGPRGRGRGRGDWNIGTPGGLQEVTYTIPADKCGLVIGKGGETIKNINQ 387
Query: 375 ATRASIRILTN 385
+ A + + N
Sbjct: 388 QSGAHVELQRN 398
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 54/283 (19%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI--SETVP 84
R PG ++ G V L P K+G +IGKGG+ +KQL+ T + + + +P
Sbjct: 155 RNGPGFHSQMDG---SSAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMP 211
Query: 85 GCDERIVTI----YSSSEGTNLF------EDSGEFVSPAQDALFRVHDRIVAEDSLADDE 134
++ + I Y + L +D G+F S D
Sbjct: 212 TGSDKPLRISGDPYKVQQARELVVEIIREKDQGDFRSGRSD------------------- 252
Query: 135 FGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQ 194
FG ++ + VP +G VIG+ G++I+ I+ + +I+ D+ +S D + Q
Sbjct: 253 FGSRLGSSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPDRVAQ 307
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR 254
V G+P + A+ I + R + G + +G+ G
Sbjct: 308 VMGQPERCQHAVHLINELVQTAQERDGFGGPLGPRGRGRGRGDWN----IGTPGGLQ--- 360
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ PA G VIGKGG IK I Q+SGA +++
Sbjct: 361 --------EVTYTIPADKCGLVIGKGGETIKNINQQSGAHVEL 395
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 121/304 (39%), Gaps = 59/304 (19%)
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
G +IT VP +G +IG+GG+ I I+ E+ +I+I D D +
Sbjct: 79 GTRAIITEDFKVPDKMVGFIIGRGGEQITRIQLESNCKIQIAAD-----SGGMMDRPCTL 133
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P + +A L QI R P + +
Sbjct: 134 TGTPESIEQAKRLLGQIVDRCRNGP-------------------------------GFHS 162
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIF 310
+ D +SA + ++ PA +G VIGKGG IKQ+++ +G + + D G D +
Sbjct: 163 QMDGSSAVQ---EILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLR 219
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTR------ILVPSAQIGCLIGR 364
IS + + + + R ++ + SG +R + VP +G +IGR
Sbjct: 220 ISGDPYKVQQARELVVEII---REKDQGDFRSGRSDFGSRLGSSIDVAVPRFAVGIVIGR 276
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G +I ++++ A +RI + P + + Q+ G + A+ + L
Sbjct: 277 NGEMIKKIQN--DAGVRI---QFKPDDGISPDRVAQVMGQPERCQHAVHLIN-ELVQTAQ 330
Query: 425 EREG 428
ER+G
Sbjct: 331 ERDG 334
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 36 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 87
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 88 KDFYPGTTERVCLIQGTIEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 144
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 145 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 195
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 196 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 229
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTIE 106
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 107 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 166
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 167 ATVKAIMEQSGAWVQL 182
>gi|324512087|gb|ADY45016.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 515
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 147/348 (42%), Gaps = 54/348 (15%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S++ +++S G + R T+ +GT + + +
Sbjct: 39 PDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTL----QGTKMAVERAK-- 92
Query: 111 SPAQDALFRVHDRIVAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S QD + R +R D G IT ML+P + G VIGKGG+ I+NI+ +
Sbjct: 93 SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQ 152
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++ ++++ + + L++ GEP V A R+ E
Sbjct: 153 AGVKMVMIQETQE---SGGQPKPLRIIGEP-----DKVDTARRMVE-------------- 190
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIR 288
+I QS + G + S+ ++ P ++G +IGKGG IK++
Sbjct: 191 DILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEVIVPRASVGMIIGKGGETIKRLA 250
Query: 289 QESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
ESGA I K D D C + T E + I+ +
Sbjct: 251 AESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELIFY---------------- 294
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYE 394
+ VP+ + G +IG+GG I ++ + + A + + + P +YE
Sbjct: 295 ----MHVPANKTGLVIGKGGETIKQICAESGAHVEL--SREPPPNSYE 336
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 155/389 (39%), Gaps = 90/389 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ V G +RI+TI
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRILTITGGC--------- 101
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEF---GELTLIT----VRMLVPADQIGCVIGKG 159
DA+ + + IVA+ L G L T +++L+ +Q+G +IG+
Sbjct: 102 --------DAISKAY-AIVAKALLEGAPMMGMGGLVSTTGTHPIKLLISHNQMGTIIGRQ 152
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P ++KA+ ++ L ++ R
Sbjct: 153 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIQKAIWEMCKCLIDDWER 208
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+G L P+V + RE+S V GN
Sbjct: 209 G--------------TGTVLYNPVVRTQTGGGQGGIRNEGREYSSPRVMRTGNGA----- 249
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTE 339
QE+ + S G A R P T
Sbjct: 250 ------DFSQEAPRTFNRRSDGE-----------------------TAGRGVP-----TH 275
Query: 340 RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EE 397
E+G+ + T I +PS +GC+IGRGG+ ISE+R + A I ++ K ++D E
Sbjct: 276 DENGEEIQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARI------SIAKAPHDDTGER 329
Query: 398 MVQITGSLDVASSALSQVTLRLRANTFER 426
M I GS +AL + L R
Sbjct: 330 MFTIMGSAKANETALYLLYENLEGEKMRR 358
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTNLFEDS-GEFVS 111
GSIIGKGG+ + QL+ ET + I++S++ PG ER+ + ++E N E V
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 112 PAQDALFR--VHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
A+ + V + + + ++ D + +++VP G +IGKGG ++ + +
Sbjct: 61 EIPQAMTKPEVVNILQPQTTMNPDRAKQ-----AKLIVPNSTAGLIIGKGGATVKAVMEQ 115
Query: 170 TRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ A +++ K E + L + ++ V+GEP V KA+ I ++ E+P S L +S
Sbjct: 116 SGAWVQLSQKPEGINLQ----ERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNIS 169
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 274 GGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------FISTKEFFEDPSP 322
G +IGKGG I Q+++E+GA+IK+ S G C++ + F +
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVR 60
Query: 323 TITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
I A+ LQP+ + +R +++VP++ G +IG+GGA + +
Sbjct: 61 EIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLIIGKGGATVKAVMEQ 115
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
+ A +++ P+ E +V ++G + A+S + +++
Sbjct: 116 SGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 157
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 98/192 (51%), Gaps = 18/192 (9%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 81 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF-GELTLITVRMLVPA 149
N+ ++ E + +A +R + + + + G + T ++ +P
Sbjct: 141 AIHIATYYVGNILIEAQERMPSTANASYRPGNP--TRRPITNAPYPGSTYVQTQQIYIPN 198
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKD----EHLPLCALSF--DELLQVAGEPAVVR 203
D +GC+IGKGG I IR + +QI+I++ +P A + L+ + G+PA ++
Sbjct: 199 DLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPANIQ 258
Query: 204 KALVQIASRLHE 215
A+ + RL +
Sbjct: 259 MAVQMLYHRLEQ 270
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 113/250 (45%), Gaps = 40/250 (16%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIG+ G V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 16 IIGRAGAHVNEIREKSGARVVVSESIPGNPERILNV------------SGPL-----DAV 58
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F +L +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 59 SKAFGLIVRR--INDEPFDVPSLPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGA 116
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + LP S + +L VAG + A + + L E R + S++N
Sbjct: 117 RLN-ASEGMLP---GSTERVLSVAGVADAIHIATYYVGNILIEAQER-----MPSTANAS 167
Query: 233 QSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
G P+ + S + ++ P +G +IGKGG I +IR S
Sbjct: 168 YRPGNPTRRPITNA-------PYPGSTYVQTQQIYIPNDLVGCIIGKGGSKINEIRHMSA 220
Query: 293 ASIKVDSSGA 302
+ IK+ GA
Sbjct: 221 SQIKIMEPGA 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 121/311 (38%), Gaps = 74/311 (23%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
+I +R L+ +IG+ G + IR ++ A R++ E +P + + +L V+G
Sbjct: 1 MIHMRCLIVTQDASIIIGRAGAHVNEIREKSGA--RVVVSESIPG---NPERILNVSGPL 55
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
V KA I R+++ P + L GS
Sbjct: 56 DAVSKAFGLIVRRINDEP--------------------FDVPSLPGS------------- 82
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-----------DCI 308
R +++ + P +G VIGKGG IK+I+ SGA + G D I
Sbjct: 83 RAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAI 142
Query: 309 ---------IFISTKEFFEDPSPTITAALRLQP-----RCSEKTERESGDPVITTRILVP 354
I I +E PS TA +P R V T +I +P
Sbjct: 143 HIATYYVGNILIEAQERM--PS---TANASYRPGNPTRRPITNAPYPGSTYVQTQQIYIP 197
Query: 355 SAQIGCLIGRGGAIISEMRSATRASIRIL------TNENVPKVAYEDEEMVQITGSLDVA 408
+ +GC+IG+GG+ I+E+R + + I+I+ T E E +V ITG
Sbjct: 198 NDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITGQPANI 257
Query: 409 SSALSQVTLRL 419
A+ + RL
Sbjct: 258 QMAVQMLYHRL 268
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ + ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAVMEQSGAWVQL 183
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRTNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFED--------------SGEFVSPAQDALFRVHDRI--- 124
PG ER+ I + E N D E VS Q DR+
Sbjct: 74 FYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQT 133
Query: 125 ---VAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LK 178
+ +D E + + +++VP G +IGKGG ++ + ++ A +++ K
Sbjct: 134 LPTACHTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK 193
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
E + L + ++ ++GEP RKA+ I ++ E+P S L +S S+
Sbjct: 194 PEGINLQ----ERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSN 240
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 7/160 (4%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF--YPGTTERVCLIQGTVEAL 92
Query: 203 RKALVQIASRLHENPSRSQHL----LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
IA ++ E P +Q +L + + V + P E S
Sbjct: 93 NGVHDFIAEKVREMPQSTQKTEPVSILQPQTTV-NPDRVKQTLPTACHTTPKEDANPEKS 151
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
R S +L+ P G +IGKGG +K + ++SGA +++
Sbjct: 152 RRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 191
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 90
Query: 316 FFEDPSPTITAALRLQPRCSEKTE----------------------------RESGDP-- 345
I +R P+ ++KTE +E +P
Sbjct: 91 ALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTLPTACHTTPKEDANPEK 150
Query: 346 ---VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ +++VP++ G +IG+GGA + + + A +++
Sbjct: 151 SRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 190
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 41 SEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYS 95
SED Y + L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ I
Sbjct: 55 SEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 114
Query: 96 SSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPA 149
+ E N F++ P A + + ++ D + V+++VP
Sbjct: 115 TVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQ-----VKIIVPN 166
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-LLQVAGEPAVVRKALVQ 208
G +IGKGG ++ I ++ A +++ + ++ E ++ V+GEP RKA+
Sbjct: 167 STAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERVVTVSGEPEQNRKAVEL 222
Query: 209 IASRLHENPSRSQHLLLS 226
I ++ E+P L +S
Sbjct: 223 IIQKIQEDPQSGSCLNIS 240
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 59 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 117
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 118 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 177
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 178 ATVKAIMEQSGAWVQL 193
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 29/137 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIR 175
GG I+ IR T A ++
Sbjct: 116 GGCKIKEIREVTEAALK 132
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+LRLV PA G +IGKGG IK+IR+ + A++K +F S + P
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIREVTEAALK--------PYLFLFFSPLTLSQSP 148
Query: 321 SPTITAALRLQPRCS 335
+T R +P S
Sbjct: 149 PKGVTIPYRPKPSSS 163
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R T A+++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREVTEAALK 132
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 218 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 271
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 272 DLIGCIIGRQGAKINEIRQMSGAQIKI 298
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS S
Sbjct: 267 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAASISL 321
Query: 411 ALSQVTLRLRANT 423
A + +RL + T
Sbjct: 322 AQYLINVRLSSET 334
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 21/174 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAV----- 72
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQVI 163
F + + A F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 73 ---FHAVSMIA-FKLDEDLCA----APANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ IR T AQ+++ D L S + + V+G P + + QI + + E P
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILEEP 174
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + P +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI-SEGSCP------ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 46/263 (17%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
QR + +ED + P + +G IIG+GGE + +++ E+ I+I+ G ER +
Sbjct: 58 VHQRAVITED----FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVL 113
Query: 94 YSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIG 153
+ E + A+ L ++ DR +D G T+ + L+PA ++G
Sbjct: 114 TGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEI--LIPASKVG 161
Query: 154 CVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
VIGKGG+ I+ ++ T ++ +++D +P A D+ L++ G+ V++A + +
Sbjct: 162 LVIGKGGETIKQLQERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQAREMVLEII 218
Query: 214 HENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNI 273
E A G ++S+R S+ + P +
Sbjct: 219 REKD----------------------QADFRGVRNDFSSRMGGG-----SIEVSVPRFAV 251
Query: 274 GGVIGKGGGIIKQIRQESGASIK 296
G VIG+ G +IK+I+ ++G I+
Sbjct: 252 GIVIGRNGEMIKKIQNDAGVRIQ 274
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + + +
Sbjct: 149 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDAFKVQ 208
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + +D + ++ + VP +G VIG+ G
Sbjct: 209 QAREMVLEIIREKDQADFR---------GVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNG 259
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + + QV G P + A I+ + R
Sbjct: 260 EMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMGLPDRCQHAAHIISELILTAQERD 314
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
L+ + + G + VG+ G + PA G VIGKG
Sbjct: 315 GFGSLAVARGRGRGRGDWS----VGTPGGMQ-----------EITYTVPADKCGLVIGKG 359
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G IK I Q+SGA +++ + D + I T
Sbjct: 360 GENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 392
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 60/301 (19%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVA 196
+IT VP +G +IG+GG+ I I+ E+ +I+I D +P C L+
Sbjct: 63 VITEDFKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-------- 114
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + +A L QI R P H + +S I +
Sbjct: 115 GTPESIEQAKRLLGQIVDRCRNGPGF--HNDVDGNSTIQE-------------------- 152
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFI 311
++ PA +G VIGKGG IKQ+++ +G + + D G D + I
Sbjct: 153 ------------ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRI 200
Query: 312 STKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGA 367
+ F + + +R + + + R + + + VP +G +IGR G
Sbjct: 201 TGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGE 260
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
+I ++++ A +RI + P E + Q+ G D A + + L ER+
Sbjct: 261 MIKKIQN--DAGVRI---QFKPDDGISPERVAQVMGLPDRCQHA-AHIISELILTAQERD 314
Query: 428 G 428
G
Sbjct: 315 G 315
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQ--------FFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ + ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIVQKIQEDPQSGSCLNIS 230
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
+F L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAVMEQSGAWVQL 183
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 11 KRTHFQSDAATNGGSKRRNP----GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIV 66
KR H Q + G KR P G + ++ G+G +R+L P + G++IGKGG +
Sbjct: 105 KRGHGQD---SQGDFKRSRPSGGYGQKRDEPGVG-----HRFLIPSKMAGAVIGKGGTTI 156
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVA 126
K LRS+ + + + G + + + S + L E G + +D +
Sbjct: 157 KSLRSDFACQLNVPDAQ-GPERVLRFVCEDSNVSPLIEKVGNLLR---------NDMVER 206
Query: 127 EDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCA 186
+ AD + I +RMLV + G VIG G+ I+ +R +T +I + +D
Sbjct: 207 NRAQADSD------IDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDP----AP 256
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
S D L++VAG+P + +I L++ P +
Sbjct: 257 HSSDRLIKVAGQPDKIATCFGEILLILNDIPPK 289
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 11/172 (6%)
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
G Y +RDE R + P+ G VIGKGG IK +R + + V A+G +
Sbjct: 123 GGYGQKRDEPGVGH---RFLIPSKMAGAVIGKGGTTIKSLRSDFACQLNVPD--AQGPER 177
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGA 367
++ ++ + SP I L + R D I R+LV ++ G +IG G
Sbjct: 178 VLRFVCED--SNVSPLIEKVGNLLRNDMVERNRAQADSDIDMRMLVHQSKAGAVIGFKGE 235
Query: 368 IISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
I +R T I + + + + ++++ G D ++ ++ L L
Sbjct: 236 TIKGLRDKTGCKINVYQDP----APHSSDRLIKVAGQPDKIATCFGEILLIL 283
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCD--ERIVTIYSSSEGTNLFE 104
R L + G+IIGKGG +K+LRS+ + + TVP ER++T+ G NL
Sbjct: 29 RILLQSKNAGAIIGKGGANIKRLRSDYNATV----TVPDSSGPERVLTV-----GANL-- 77
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
A + L V + D EF +R L+ Q GCVIG+GG I+
Sbjct: 78 ------GTALEILLDVIPSLEDYKRFKDLEFE----CEMRWLIHQSQAGCVIGRGGNKIK 127
Query: 165 NIRTETRAQIRILKDEHLPLCA-LSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+R ET AQI++ CA S + ++Q+ G+P VV +L I L P +
Sbjct: 128 ELRDETGAQIKVYSQ-----CAPQSSERIVQLTGKPRVVVNSLATIFDLLQTAPPK 178
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 97/217 (44%), Gaps = 37/217 (17%)
Query: 246 SYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEG 304
+ G+ ++ LR++ + N G +IGKGG IK++R + A++ V DSSG E
Sbjct: 10 TIGDVPLKKTRGEGPNVELRILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPDSSGPE- 68
Query: 305 DDCIIFI-----STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIG 359
++ + + E D P++ R + E R L+ +Q G
Sbjct: 69 --RVLTVGANLGTALEILLDVIPSLEDYKRFKDLEFE----------CEMRWLIHQSQAG 116
Query: 360 CLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
C+IGRGG I E+R T A I++ + + P+ + E +VQ+TG V ++L
Sbjct: 117 CVIGRGGNKIKELRDETGAQIKVYS-QCAPQSS---ERIVQLTGKPRVVVNSL------- 165
Query: 420 RANTFEREGALAAHPPV---LPYVPMSLDITDGSKYG 453
A F+ L PP PY P + D +YG
Sbjct: 166 -ATIFD---LLQTAPPKGFNNPYDPNNFDEFYAPEYG 198
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSE 98
G+IIGKGG ++Q+R E+ + I I E + G +RI+TI S +
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQD 378
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
++ P G +IGKGG I+QIRQESGA I +D D II I+
Sbjct: 327 QVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITIT 374
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 29/173 (16%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK GEIVK+ R E+ + I IS+ C ERIVT VS
Sbjct: 31 KEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVT-----------------VSG 71
Query: 113 AQDALFRVHDRIVAEDSLADDEFGE------LTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ A+++ I + +F + I +R++VPA Q G +IGKGG I+ I
Sbjct: 72 SRSAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEI 131
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
R T I++ E LP S + + ++G + + + I + E+P +
Sbjct: 132 REITGCSIQV-ASEMLP---NSTERAVTLSGSAEAITQCIYHICCVMLESPPK 180
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS-TKEFF 317
A ++RL+ +G +IGK G I+K+ R+ESGA K++ S + I+ +S ++
Sbjct: 19 AVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGA--KINISDCSCPERIVTVSGSRSAI 76
Query: 318 EDPSPTITAALRLQPRCSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
IT + + CS+ + + G P I R++VP++Q G LIG+GG+ I E+R
Sbjct: 77 YKAFTLITK--KFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREI 134
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
T SI++ +E +P E V ++GS + + + + +
Sbjct: 135 TGCSIQV-ASEMLPN---STERAVTLSGSAEAITQCIYHICCVM 174
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 46/178 (25%)
Query: 125 VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL 184
+ + +L+DD LT +R+++ ++G +IGK G++++ R E+ A+I I D P
Sbjct: 9 IGDINLSDDPAVTLT---IRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDCSCP- 63
Query: 185 CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
+ ++ V+G + + KA I + E S+ Q
Sbjct: 64 -----ERIVTVSGSRSAIYKAFTLITKKFEEWCSQFQ----------------------- 95
Query: 245 GSYGNYSARRDEASAR---EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
D A+ + + +RL+ PA G +IGKGG IK+IR+ +G SI+V S
Sbjct: 96 ----------DNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVAS 143
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSE 98
G R + P + GS+IGKGG +K++R T +I++ SE +P ER VT+ S+E
Sbjct: 102 GKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSAE 161
Query: 99 G 99
Sbjct: 162 A 162
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ VP+ IGC+IG+GG I+E+R + A IRI E + + + + ITG+ D S
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RDSGNTDRTITITGNPD--SV 345
Query: 411 ALSQVTLRLR 420
AL+Q + +R
Sbjct: 346 ALAQYLINMR 355
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
M VP D IGC+IGKGG I IR + A IRI E + + D + + G P V
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERD--SGNTDRTITITGNPDSVAL 347
Query: 205 ALVQIASRL 213
A I R+
Sbjct: 348 AQYLINMRI 356
>gi|320580877|gb|EFW95099.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 689
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 124/291 (42%), Gaps = 38/291 (13%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
T +G YR L R+ G+IIGK G+ + ++R +T +S+ + GC +RI+T+
Sbjct: 376 TNDVDLGKSLITYRMLVSRREAGAIIGKNGDNITRIREQTNVKAGVSKVIEGCIDRILTV 435
Query: 94 -----------------YSSSEGTNLFEDSGEFVSPAQDALFRVHD-RIVAEDSLADDEF 135
+ S + S P + + + A D F
Sbjct: 436 TGIVDNVPRALVQFAKAVTDSNVQTVASASANGTDPTSLITYNFFPLKPLCPTPAASDPF 495
Query: 136 GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
TL ++R+L+P Q+G +IGKGG I++I+ ++ KD S + +++V
Sbjct: 496 YAETL-SLRLLIPHSQMGTLIGKGGSRIKSIQETYNIKMVASKD----YLRNSTERIVEV 550
Query: 196 AGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSY---GNYSA 252
G + +AL I+ LLS + ++ Y +P Y
Sbjct: 551 QGAKTNLVEALNTIS-----------RCLLSDYHGVV-ATIYYTPSPRQPPYKGGSKLDP 598
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE 303
++ S +E S + P +G +IGK G I++IR+ SG +I +D+ E
Sbjct: 599 QQGTGSDKEISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINIDAEDNE 649
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 42/293 (14%)
Query: 124 IVAEDSLADD-EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+ + D + +D + G+ +LIT RMLV + G +IGK G I IR +T + + K
Sbjct: 369 LFSSDGMTNDVDLGK-SLITYRMLVSRREAGAIIGKNGDNITRIREQTNVKAGVSK---- 423
Query: 183 PLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAP 242
+ D +L V G V +ALVQ A + + S Q + +S++ +S + +
Sbjct: 424 -VIEGCIDRILTVTGIVDNVPRALVQFAKAVTD--SNVQTVASASANGTDPTSLITYNFF 480
Query: 243 LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK------ 296
+ A D A SLRL+ P +G +IGKGG IK I++ +
Sbjct: 481 PLKPLCPTPAASDPFYAETLSLRLLIPHSQMGTLIGKGGSRIKSIQETYNIKMVASKDYL 540
Query: 297 -------VDSSGAEGD---------DCII-----FISTKEFFEDP-SPTITAALRLQPRC 334
V+ GA+ + C++ ++T + P P +L P+
Sbjct: 541 RNSTERIVEVQGAKTNLVEALNTISRCLLSDYHGVVATIYYTPSPRQPPYKGGSKLDPQQ 600
Query: 335 SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
+++E I+ + P +G LIG+ G+ I E+R + +I I +N
Sbjct: 601 GTGSDKE-----ISEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINIDAEDN 648
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 110 VSPAQDALFRVHDRIVAEDS-LADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRT 168
+ PA D L RVH ++V D AD G + R+LV Q G +IGK G I++ +
Sbjct: 12 IPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGKQGSTIKSFQD 71
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
T IRIL EHLP+ AL D ++++ GE + V KA+ +A L
Sbjct: 72 ATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHL 116
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
+G PV+T R+LV Q G LIG+ G+ I + AT +IRIL +E++P A D+ +V+I
Sbjct: 40 AGRPVVT-RLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEI 98
Query: 402 TGSLDVASSALSQVTLRLRANTFER 426
G A+ V + LR +R
Sbjct: 99 QGESSGVHKAVELVAIHLRKFLVDR 123
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDERIVTIYSSSEGTN-- 101
+ L P GSIIGKGG+ + QL+ ET + I++S++ PG ER+ I + E N
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSV 68
Query: 102 ---LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGK 158
+ E E AQ + + ++ D + +++VP G +IGK
Sbjct: 69 HNFIAEKVREMPQSAQKP--EPVSILQPQTTVNPDRVKQ-----AKLIVPNSTAGLIIGK 121
Query: 159 GGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
GG ++ + ++ A +++ K E + L + ++ ++GEP RKA+ I ++ E+P
Sbjct: 122 GGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTISGEPEQNRKAVEIIVQKIQEDP 177
Query: 218 SRSQHLLLSSSS 229
S L +S S+
Sbjct: 178 QSSSCLNISYSN 189
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 63
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ ++K E S D V +++VP++ G +IG+GG
Sbjct: 64 ALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGG 123
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 124 ATVKAVMEQSGAWVQL 139
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI-ASRLHENPSRSQHL 223
IR T AQ+++ D L S + + V+G P + + QI A L +P S+ L
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILEHHPVSSEPL 181
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + P +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI-SEGSCP------ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 156/365 (42%), Gaps = 57/365 (15%)
Query: 57 SIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDA 116
++IGKGGE V +R + + +S+ G ERI+T+ SG V A
Sbjct: 139 TVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTV------------SG--VVDAVAK 184
Query: 117 LFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
F + R + + L +R+L+P IG +IGKGG I+ I+ + A++
Sbjct: 185 AFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLN- 243
Query: 177 LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSG 236
D +LP LS + L V G V A + S L E + +++ Y S
Sbjct: 244 ASDSYLP---LSTERSLVVLGVADAVHIATYYVGSTLFE---QLTERFGGPAASAYASRS 297
Query: 237 VYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK 296
+ + G+ N++ + + + L + G+ +G GG+ Q Q++G ++
Sbjct: 298 GGPAGVVPGAMPNHTVKDRHLTNSQLPLHIT--GGHASPAVGGYGGVGPQQPQQAGHAVP 355
Query: 297 VDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
GA G P P A+ QP +T +I +P+
Sbjct: 356 -QPHGATGPQG-----------QPMP---GAIPGQP--------------LTQQIFIPND 386
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVT 416
+G +IG+GGA I+E+R + + I+I N P+ +E +V ITG+ + AL +
Sbjct: 387 MVGAIIGKGGAKINEIRQLSGSVIKI----NEPQ-DNSNERLVTITGTAECNQMALYMLY 441
Query: 417 LRLRA 421
RL +
Sbjct: 442 SRLES 446
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 53/179 (29%)
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
++L DE G I VR ++ + + VIGKGG+ + +R + A+ C +
Sbjct: 116 NALPHDESG---WIHVRSVITSAEAATVIGKGGENVSLVRKLSGAK-----------CTV 161
Query: 188 S------FDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA 241
S + +L V+G V KA I L+ P L A
Sbjct: 162 SDYQKGAVERILTVSGVVDAVAKAFGLIIRTLNNEP---------------------LEA 200
Query: 242 PLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS 300
P +++++ + LRL+ P IG +IGKGG IK+I++ SGA + S
Sbjct: 201 P------------SDSTSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDS 247
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
+ P +G+IIGKGG + ++R + S I+I+E +ER+VTI ++E +
Sbjct: 380 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQM---- 435
Query: 107 GEFVSPAQDALFRVHDRIVAE 127
AL+ ++ R+ +E
Sbjct: 436 ---------ALYMLYSRLESE 447
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 162/389 (41%), Gaps = 92/389 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ +GT
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGT------ 99
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
R + +VA+ L + G +++ VR+L+ +Q+G +IG+
Sbjct: 100 -----------ARAY-ALVAKGLLEGAPQMGMGGVVSNNGTHPVRLLISHNQMGTIIGRS 147
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P + KA+ +I L ++ R
Sbjct: 148 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 203
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+L + + + S G +AP+ + GN +S R GN
Sbjct: 204 GTGTILYNPA-VRASVG---TAPVNQNVGN-----------GYSSRPYNRTGN------- 241
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTE 339
GA D SG G S + + P +T
Sbjct: 242 ------------GADFS-DQSGGYGRRSNPDTSNRGY-----PLVT-------------- 269
Query: 340 RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EE 397
E G+ + T I +P+ +GC+IGR G+ I+E+R ++ A I I K ++D E
Sbjct: 270 -EDGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISI------AKAPHDDTGER 322
Query: 398 MVQITGSLDVASSALSQVTLRLRANTFER 426
M I GS AL + L A R
Sbjct: 323 MFTIMGSAQANEKALYLLYENLEAEKTRR 351
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+ G I IR + A+I I K H + + + + G
Sbjct: 277 TQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDD----TGERMFTIMGSAQA 332
Query: 202 VRKALVQIASRLHENPSRSQHL 223
KAL + L +R L
Sbjct: 333 NEKALYLLYENLEAEKTRRSQL 354
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 135/315 (42%), Gaps = 84/315 (26%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R CP+++ +IGK G+++ LR + + I++SE + ERI+++ +E
Sbjct: 204 FRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAEN------ 257
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
V+ A F + R + E+ +DE + +++L+P +G +IGKGG
Sbjct: 258 ----VAKA----FGLITRAILEE--PEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKF 307
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
+ I + A+ LK PL S D +L V G + A+ I+ + E+
Sbjct: 308 REIEENSAAK---LKAAEQPLPN-STDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKH 363
Query: 217 ------PSRSQHLLLSSS-----SNIYQSSGVYLSAPLVG--SYGNYSARRDEASA---- 259
P +Q L++++ +N Y ++G+ + P+ G + + R+ + SA
Sbjct: 364 KIVYYTPGNNQ--LMNNTMGLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHN 421
Query: 260 -----------------------------------REFSLRLVCPAGNIGGVIGKGGGII 284
+FS + NIG VIGKGG I
Sbjct: 422 QITTPVPTQSYTDEHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNI 481
Query: 285 KQIRQESGAS-IKVD 298
KQIR+ SG S +K++
Sbjct: 482 KQIRESSGCSYVKIE 496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 238 YLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y S P+ N+ A R E+ S R+ CP VIGK G +I +R+++ A I+V
Sbjct: 183 YTSRPM----ANHQAER-ESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQV 237
Query: 298 DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRC-SEKTERESGDPV---ITTRILV 353
+ + + II + + P+ + A L R E+ E E + ++L+
Sbjct: 238 SENIKDVQERIISV------KGPAENVAKAFGLITRAILEEPEDEPASIMSRQYNLKVLI 291
Query: 354 PSAQIGCLIGRGGAIISEMRSATRASIR 381
P +G +IG+GG+ E+ + A ++
Sbjct: 292 PHPMVGYIIGKGGSKFREIEENSAAKLK 319
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 157/390 (40%), Gaps = 91/390 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ +GT
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGT------ 99
Query: 107 GEFVSPAQDALFRVHDRIVAEDSL-ADDEFGELTLIT------VRMLVPADQIGCVIGKG 159
R + +VA+ L + G ++ VR+L+ +Q+G +IG+
Sbjct: 100 -----------ARAY-ALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQ 147
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
G I++I+ + ++ + + E LP S + +++V G P + KA+ +I L ++ R
Sbjct: 148 GLKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAVWEIGKCLIDDWQR 203
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLV-GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+G L P V S G ++ + ++ R GN
Sbjct: 204 G--------------TGTILYNPAVRASVGGSTSMNTSSVGNGYNSRPYNRTGN------ 243
Query: 279 KGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKT 338
GA SG G S + + P +T
Sbjct: 244 -------------GADFSDGQSGGYGRRSNPDTSNRGY-----PLVT------------- 272
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--E 396
E G+ + T I +P+ +GC+IGRGG+ I+E+R ++ A I I K +++ E
Sbjct: 273 --EDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISI------AKAPHDETGE 324
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFER 426
M I GS AL + L A R
Sbjct: 325 RMFTIMGSAQANEKALYLLYENLEAEKTRR 354
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G
Sbjct: 280 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPH----DETGERMFTIMGSAQA 335
Query: 202 VRKALVQIASRLHENPSRSQHL 223
KAL + L +R L
Sbjct: 336 NEKALYLLYENLEAEKTRRSQL 357
>gi|413949911|gb|AFW82560.1| hypothetical protein ZEAMMB73_842471 [Zea mays]
Length = 418
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 23/195 (11%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+K+G+IIG GE VK+L ET++ +RI E+ V I+ E E + P
Sbjct: 116 KKVGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGR-------EQLDEPLPP 168
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
A DAL RV+ + + DSL + G +I ++L P++Q +IG+ G +I +I ++
Sbjct: 169 AMDALLRVYQQTINNDSL---DVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQT 225
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
IR+L +E L + D LL+ P+ + ++++SR P +S +
Sbjct: 226 DIRVLGNE---LPSDLIDTLLKWI--PSNDEELRLRLSSRSTATP--------HASVAAF 272
Query: 233 QSSGVYLSAPLVGSY 247
S+ V +AP +G +
Sbjct: 273 ASAPVSHTAPWLGKF 287
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP-SPTITAALRLQ 331
+G +IG G +K++ +E+ A +++ + + I +E ++P P + A LR+
Sbjct: 118 VGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPPAMDALLRVY 177
Query: 332 PRCSEKTERESG-DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE 386
+ + G D VI +IL PS Q LIG G +I+ + A++ IR+L NE
Sbjct: 178 QQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTDIRVLGNE 233
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + +++ E+ I+I+ G ER
Sbjct: 106 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERP 161
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 162 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEI--LIPAS 209
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+ V++A +
Sbjct: 210 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVL 266
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++SAR S+ + P
Sbjct: 267 EIIREKD----------------------QADFRGVRSDFSARMGGG-----SIEVSVPR 299
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 300 YAVGIVIGRNGEMIKKIQNDAGVRIQ 325
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 52/283 (18%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + + +
Sbjct: 200 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQ 259
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + D + ++ + VP +G VIG+ G
Sbjct: 260 QAREMVLEIIREKDQADFR---------GVRSDFSARMGGGSIEVSVPRYAVGIVIGRNG 310
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + + QV G P R
Sbjct: 311 EMIKKIQNDAGVRIQFKPDD-----GISTERVAQVMGLP------------------DRC 347
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS-ARRDEASAREFS---------LRLVCPA 270
QH +++I S + L+A +GN + AR ++S + PA
Sbjct: 348 QH-----AAHII--SELILTAQERDGFGNLAIARGRGRGRGDWSVGTPGGVQEITYTVPA 400
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G VIGKGG IK I Q+SGA +++ + D + I T
Sbjct: 401 DKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 443
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 139/356 (39%), Gaps = 77/356 (21%)
Query: 92 TIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLV 147
++Y +D G VS A R +RI ++ G L +IT V
Sbjct: 69 SVYGYGVQKRPLDDGGLRVSGLHGAQIRDTERI-------GNQLGALVHQRAVITEEFKV 121
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPAVVRK 204
P +G +IG+GG+ I I+ E+ +I+I D +P C L+ G P + +
Sbjct: 122 PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT--------GTPESIEQ 173
Query: 205 A---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
A L QI R P H + +S I +
Sbjct: 174 AKRLLGQIVDRCRNGPGF--HNDVDGNSTIQE---------------------------- 203
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFISTKEF-FE 318
++ PA +G VIGKGG IKQ+++ +G + + G G D + I+ F +
Sbjct: 204 ----ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQ 259
Query: 319 DPSPTITAALRLQPRC------SEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
+ +R + + S+ + R G + + VP +G +IGR G +I ++
Sbjct: 260 QAREMVLEIIREKDQADFRGVRSDFSARMGGG---SIEVSVPRYAVGIVIGRNGEMIKKI 316
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
++ A +RI + P E + Q+ G D A + + L ER+G
Sbjct: 317 QND--AGVRI---QFKPDDGISTERVAQVMGLPDRCQHA-AHIISELILTAQERDG 366
>gi|410922393|ref|XP_003974667.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 559
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 156/396 (39%), Gaps = 97/396 (24%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P R +G IIG+GGE + +++ E+ I+I+ G ER ++ + E
Sbjct: 86 YKVPDRMVGFIIGRGGEQINRIQLESGCKIQIAADSGGLMERPCSLTGTPES-------- 137
Query: 108 EFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+ A+ L ++ DR D GE ML+PA ++G VIG+GG I+ ++
Sbjct: 138 --IEHAKRLLVQIVDRCRNGPGFHGD--GEGGASVQEMLIPASKVGLVIGRGGDTIKQLQ 193
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSS 227
++ +++D +P A D+ L+++G+P V+ A + ++
Sbjct: 194 ERAGVKMMMIQDGPMPTGA---DKPLRISGDPYKVQAARELVLE------------VIRD 238
Query: 228 SSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQI 287
++S A L GS ++ + P +G VIG+ G +IK+I
Sbjct: 239 KDGDFRSGRTDFGARLGGS----------------NIDVPVPRFAVGIVIGRNGEMIKKI 282
Query: 288 RQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP-RCSEKT-------- 338
+ ++G I+ + DD I SP A + QP RC
Sbjct: 283 QNDAGVRIQF-----KADDGI------------SPERVAMVMGQPDRCQHAVHLINELIQ 325
Query: 339 ---ERE--------------------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
ER+ S P+ + + + G +IG+GG I +
Sbjct: 326 TAQERDGFSSALRGGRVRGRGDWTVGSPGPLQEVTYTISADKCGLVIGKGGETIKSINQQ 385
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGS---LDVA 408
+ A + + N P + + I GS +DVA
Sbjct: 386 SGAHVEL--QRNPPPSTDHNTRVFTIRGSAQQMDVA 419
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 34/257 (13%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
+V L P K+G +IG+GG+ +KQL+ + + + P G D+ +
Sbjct: 167 SVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPL---------- 216
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+ D + + + L + D+ S D L + + VP +G VIG+ G
Sbjct: 217 RISGDPYKVQAARELVLEVIRDKDGDFRSGRTDFGARLGGSNIDVPVPRFAVGIVIGRNG 276
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + + V G+P + A+ I + R
Sbjct: 277 EMIKKIQNDAGVRIQFKADD-----GISPERVAMVMGQPDRCQHAVHLINELIQTAQERD 331
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
SS + VGS G + A G VIGKG
Sbjct: 332 -----GFSSALRGGRVRGRGDWTVGSPGPLQ-----------EVTYTISADKCGLVIGKG 375
Query: 281 GGIIKQIRQESGASIKV 297
G IK I Q+SGA +++
Sbjct: 376 GETIKSINQQSGAHVEL 392
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 123/310 (39%), Gaps = 71/310 (22%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL---CALSFDELLQVA 196
++T VP +G +IG+GG+ I I+ E+ +I+I D + C+L+
Sbjct: 81 VVTEDYKVPDRMVGFIIGRGGEQINRIQLESGCKIQIAADSGGLMERPCSLT-------- 132
Query: 197 GEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
G P + A LVQI R P G +G+
Sbjct: 133 GTPESIEHAKRLLVQIVDRCRNGP---------------------------GFHGDGEG- 164
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFI 311
AS +E ++ PA +G VIG+GG IKQ+++ +G + + D G D + I
Sbjct: 165 --GASVQE----MLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQDGPMPTGADKPLRI 218
Query: 312 STKEFFEDPSPTITAA--LRLQPRCSEKTERESGDPVITTR-------ILVPSAQIGCLI 362
S + + AA L L+ + + SG R + VP +G +I
Sbjct: 219 SGDPY------KVQAARELVLEVIRDKDGDFRSGRTDFGARLGGSNIDVPVPRFAVGIVI 272
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
GR G +I ++++ I+ ++ + E + + G D A+ + L
Sbjct: 273 GRNGEMIKKIQNDAGVRIQFKADDGI-----SPERVAMVMGQPDRCQHAVHLIN-ELIQT 326
Query: 423 TFEREGALAA 432
ER+G +A
Sbjct: 327 AQERDGFSSA 336
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 41/261 (15%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGK G V ++R ++ + + +SE++PG ERI+ + SG DA+
Sbjct: 124 IIGKAGTHVNEIREKSGARVMVSESIPGNPERILNV------------SGPL-----DAV 166
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + D+ F + ++ +T++ ++P ++G VIGKGG I+ I+ + A
Sbjct: 167 SKAFGLIVRR--INDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGA 224
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIY 232
++ + + S + +L V+G + A I + L E R + S ++ Y
Sbjct: 225 RLNASEG----MLPGSTERVLSVSGVADAIHIATYYIGNILIEANER----MPSYQNSSY 276
Query: 233 QSSGVYLS-APLVGS----YGNYSA----RRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+ S S AP GS G+ SA A+ + ++ P +G +IGKGG
Sbjct: 277 RPSSTSRSRAPYQGSSYVPIGHASALLQPHAPPPGAQLQTQQIYIPNDLVGCIIGKGGSK 336
Query: 284 IKQIRQESGASIKVDSSGAEG 304
I +IR S + IK+ GA G
Sbjct: 337 INEIRHVSASQIKIMEPGAVG 357
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSE 98
GS +++ P ++GS+IGKGG +K+++ + + + SE +PG ER++++ ++
Sbjct: 189 GSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 248
Query: 99 GT--------NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL------------ 138
N+ ++ E + Q++ +R + + +
Sbjct: 249 AIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPHAP 308
Query: 139 ----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD---------EHLPLC 185
L T ++ +P D +GC+IGKGG I IR + +QI+I++ + P
Sbjct: 309 PPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAPAA 368
Query: 186 ALSFDELLQVAGEPAVVRKALVQIASRLHE 215
A + L+ + G P ++ A+ + SRL +
Sbjct: 369 AHEGERLVVITGAPNNIQIAVQLLYSRLEQ 398
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 129/338 (38%), Gaps = 99/338 (29%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGK G + IR ++ A R++ E +P + + +L V+G
Sbjct: 110 IHMRCLIVTQDASIIIGKAGTHVNEIREKSGA--RVMVSESIPG---NPERILNVSGPLD 164
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I R+++ P P V +R
Sbjct: 165 AVSKAFGLIVRRINDEP---------------------FDKPSV------------PGSR 191
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-----------DCI- 308
+++ + P +G VIGKGG IK+I+ SGA + G D I
Sbjct: 192 AVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIH 251
Query: 309 --------IFISTKEFFED-------PS---------------PTITAALRLQPRCSEKT 338
I I E PS P A+ LQP
Sbjct: 252 IATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPHAPPP- 310
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI---------LTNENVP 389
G + T +I +P+ +GC+IG+GG+ I+E+R + + I+I + + P
Sbjct: 311 ----GAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAP 366
Query: 390 KVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
A+E E +V ITG+ + Q+ ++L + E+E
Sbjct: 367 AAAHEGERLVVITGAPNNI-----QIAVQLLYSRLEQE 399
>gi|171847306|gb|AAI61696.1| LOC100158419 protein [Xenopus laevis]
Length = 674
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 51/271 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN----LF 103
Y P +G IIG+GGE + +++ E+ ++IS G ER+V++ S + L
Sbjct: 98 YRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLL 157
Query: 104 ED---SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+D G P+Q HD ++ + G L I ++PA + G +IGKGG
Sbjct: 158 DDIVARGRGGPPSQ-----FHDS-------SNGQNGSLQEI----MIPAGKAGLIIGKGG 201
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+ I+ ++ ++ +++D + D+ L++ GEP V++A + L E R
Sbjct: 202 ETIKQLQERAGVKMILIQDGSQ---NTNMDKPLRIVGEPFKVQQACEMVMDLLKE---RD 255
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
Q + N Y S R + + P ++G VIG+
Sbjct: 256 Q---ANFDRNEYGS-------------------RGGGGGGGGGIDVPVPRHSVGVVIGRS 293
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
G +IK+I+ ++G I+ G D I I
Sbjct: 294 GDMIKKIQNDAGVRIQFKQDDGTGPDKIAHI 324
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 101/268 (37%), Gaps = 44/268 (16%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G ++ + P K G IIGKGGE +KQL+ +++ I S+
Sbjct: 178 GQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGV-------------KMILIQDGSQN 224
Query: 100 TNLFED---SGEFVSPAQDALFRVHDRIVAEDSLADD--EFGE-----LTLITVRMLVPA 149
TN+ + GE Q A V D + D D E+G + + VP
Sbjct: 225 TNMDKPLRIVGEPFK-VQQACEMVMDLLKERDQANFDRNEYGSRGGGGGGGGGIDVPVPR 283
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
+G VIG+ G +I+ I+ + +I+ +D+ D++ + G P A I
Sbjct: 284 HSVGVVIGRSGDMIKKIQNDAGVRIQFKQDD-----GTGPDKIAHIMGPPDRCEHAARII 338
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
LL S + G + G FS+ P
Sbjct: 339 GD-----------LLQSLRTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSI----P 383
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV 297
G VIG+GG +K I Q++GA +++
Sbjct: 384 THKCGLVIGRGGENVKAINQQTGAFVEI 411
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS--------TKEFFED 319
P G +G +IG+GG I +I+QESG +++ + ++ ++ K +D
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDD 159
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
I A R P S+ + +G I++P+ + G +IG+GG I +++ RA
Sbjct: 160 ----IVARGRGGP-PSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQE--RAG 212
Query: 380 IRIL 383
++++
Sbjct: 213 VKMI 216
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 51/271 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN----LF 103
Y P +G IIG+GGE + +++ E+ ++IS G ER+V++ S + L
Sbjct: 156 YRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLL 215
Query: 104 ED---SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+D G P+Q HD ++ + G L I ++PA + G +IGKGG
Sbjct: 216 DDIVARGRGGPPSQ-----FHDS-------SNGQNGSLQEI----MIPAGKAGLIIGKGG 259
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+ I+ ++ ++ +++D + D+ L++ GEP V++A + L E R
Sbjct: 260 ETIKQLQERAGVKMILIQDGSQ---NTNMDKPLRIVGEPFKVQQACEMVMDLLKE---RD 313
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
Q + N Y S R + + P ++G VIG+
Sbjct: 314 Q---ANFDRNEYGS-------------------RGGGGGGGGGIDVPVPRHSVGVVIGRS 351
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
G +IK+I+ ++G I+ G D I I
Sbjct: 352 GDMIKKIQNDAGVRIQFKQDDGTGPDKIAHI 382
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 100/268 (37%), Gaps = 44/268 (16%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G ++ + P K G IIGKGGE +KQL+ +++ I S+
Sbjct: 236 GQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGV-------------KMILIQDGSQN 282
Query: 100 TNL---FEDSGEFVSPAQDALFRVHDRIVAEDSLADD--EFGE-----LTLITVRMLVPA 149
TN+ GE Q A V D + D D E+G + + VP
Sbjct: 283 TNMDKPLRIVGEPFK-VQQACEMVMDLLKERDQANFDRNEYGSRGGGGGGGGGIDVPVPR 341
Query: 150 DQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQI 209
+G VIG+ G +I+ I+ + +I+ +D+ D++ + G P A I
Sbjct: 342 HSVGVVIGRSGDMIKKIQNDAGVRIQFKQDD-----GTGPDKIAHIMGPPDRCEHAARII 396
Query: 210 ASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCP 269
LL S + G + G FS+ P
Sbjct: 397 GD-----------LLQSLRTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSI----P 441
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKV 297
G VIG+GG +K I Q++GA +++
Sbjct: 442 THKCGLVIGRGGENVKAINQQTGAFVEI 469
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS--------TKEFFED 319
P G +G +IG+GG I +I+QESG +++ + ++ ++ K +D
Sbjct: 158 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDAVQNAKMLLDD 217
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
I A R P S+ + +G I++P+ + G +IG+GG I +++ RA
Sbjct: 218 ----IVARGRGGP-PSQFHDSSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQE--RAG 270
Query: 380 IRIL 383
++++
Sbjct: 271 VKMI 274
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 27/179 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK K L +S RI+ + C ERIVTI +
Sbjct: 17 RLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTITGPT--------- 67
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 68 --------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 119
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 120 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 174
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 37/158 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEP 199
+T+R+L+ ++G +IGK +++ ++ RI + + + P + ++ + G
Sbjct: 14 LTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCP------ERIVTITGPT 67
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
+ KA IA + E+ + S N +A S
Sbjct: 68 DAIFKAFAMIAYKFEED--------------------------ITNSMSNSTA----TSK 97
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 98 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 135
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
+ P +T R++VP++Q G LIG+GG+ I E+R +T A +++ + +P E V I
Sbjct: 95 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTI 150
Query: 402 TGSLDVASSALSQVTLRL 419
+G+ D + Q+ + +
Sbjct: 151 SGTPDAIIQCVKQICVVM 168
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 158/383 (41%), Gaps = 76/383 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI +
Sbjct: 53 RAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDA------- 105
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGGQVI 163
VS A + V R + E + + G ++ +++L+ +Q+G VIG+ G I
Sbjct: 106 ---VSKA----YAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKI 158
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
++I+ + ++ + + E LP S + +++V G P +++A+ +I L ++ R
Sbjct: 159 KHIQDVSGVRM-VAQKEMLPQ---STERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGT 214
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+L + + + G PL G NY R S+R V GN GG
Sbjct: 215 VLYNP--VVRGGG----QPLGGDR-NYPQERSYGSSR------VTRTGNGADFSSNSGGR 261
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
R +S AA R P T E+G
Sbjct: 262 PYNRRSDS---------------------------------DAASRGPP-----THDENG 283
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
+ + T I +P+ +GC+IGR G+ ISE+R A+ A I I + E M I G
Sbjct: 284 EEIQTQNISIPADMVGCIIGRQGSKISEIRKASGARISIAKGPH----DESGERMFTIMG 339
Query: 404 SLDVASSALSQVTLRLRANTFER 426
S +AL + L A R
Sbjct: 340 SAKANETALYLLYENLEAEKTRR 362
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 36/164 (21%)
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
D+E+ + TL T+R +V + + G +IGKGGQ + N+R ET + + K + D
Sbjct: 42 DEEYAQTTL-TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK-----VVQGVHDR 95
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+L + G V KA +A L E AP VG G S
Sbjct: 96 VLTITGGCDAVSKAYAVVARSLLE------------------------GAPSVGMGGVIS 131
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
A ++L+ +G VIG+ G IK I+ SG +
Sbjct: 132 ANGT------HPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRM 169
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
DE GE + T + +PAD +GC+IG+ G I IR + A+I I K H S + +
Sbjct: 280 DENGE-EIQTQNISIPADMVGCIIGRQGSKISEIRKASGARISIAKGPH----DESGERM 334
Query: 193 LQVAGEPAVVRKALVQIASRLH-ENPSRSQHLLLSS 227
+ G AL + L E RSQ L S
Sbjct: 335 FTIMGSAKANETALYLLYENLEAEKTRRSQQALEPS 370
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 180/398 (45%), Gaps = 60/398 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG-- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 253 --------CSSACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G KA +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGSIENCCKAEQEIMKKVREA--- 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVSGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
++ + P E+E+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +ED + P + +G IIG+GGE + +++ E+ I+I+ G ER
Sbjct: 87 GALVHQRAVITED----FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERP 142
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 143 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEI--LIPAS 190
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D +P A D+ L++ G+ V++A +
Sbjct: 191 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQAREMVL 247
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 248 EIIREKD----------------------QADFRGVRNDFSSRMGGG-----SIEVSVPR 280
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 281 FAVGIVIGRNGEMIKKIQNDAGVRIQ 306
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + + +
Sbjct: 181 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDAFKVQ 240
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + +D + ++ + VP +G VIG+ G
Sbjct: 241 QAREMVLEIIREKDQADFR---------GVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNG 291
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + + QV G P + A I+ + R
Sbjct: 292 EMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMGLPDRCQHAAHIISELILTAQERD 346
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
L+ + + G + VG+ G + PA G VIGKG
Sbjct: 347 GFGSLAVARGRGRGRGDWS----VGTPGGMQ-----------EITYTVPADKCGLVIGKG 391
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G IK I Q+SGA +++ + D + I T
Sbjct: 392 GENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 424
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 137/353 (38%), Gaps = 71/353 (20%)
Query: 92 TIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLV 147
++Y +D G VS A R +RI ++ G L +IT V
Sbjct: 50 SVYGYGVQKRPLDDGGLRVSGLHGAQIRDTERI-------GNQLGALVHQRAVITEDFKV 102
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQVAGEPAVVRK 204
P +G +IG+GG+ I I+ E+ +I+I D +P C L+ G P + +
Sbjct: 103 PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT--------GTPESIEQ 154
Query: 205 A---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASARE 261
A L QI R P H + +S I +
Sbjct: 155 AKRLLGQIVDRCRNGPGF--HNDVDGNSTIQE---------------------------- 184
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEF-FE 318
++ PA +G VIGKGG IKQ+++ +G + + D G D + I+ F +
Sbjct: 185 ----ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRITGDAFKVQ 240
Query: 319 DPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ +R + + + R + + + VP +G +IGR G +I ++++
Sbjct: 241 QAREMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN- 299
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
A +RI + P E + Q+ G D A + + L ER+G
Sbjct: 300 -DAGVRI---QFKPDDGISPERVAQVMGLPDRCQHA-AHIISELILTAQERDG 347
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 180/398 (45%), Gaps = 60/398 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG-- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 253 --------CSSACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G KA +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGSIENCCKAEQEIMKKVREA--- 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVSGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
++ + P E+E+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 51/271 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN----LF 103
Y P +G IIG+GGE + +++ E+ ++IS G ER+V++ S + L
Sbjct: 98 YRVPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLL 157
Query: 104 ED---SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+D G P+Q HD ++ + G L I ++PA + G +IGKGG
Sbjct: 158 DDIVARGRGGPPSQ-----FHDN-------SNGQNGSLQEI----MIPAGKAGLIIGKGG 201
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+ I+ ++ ++ +++D + D+ L++ GEP V++A + L E R
Sbjct: 202 ETIKQLQERAGVKMILIQDGSQ---NTNMDKPLRIVGEPFKVQQACEMVMDLLRE---RD 255
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
Q + N Y S R + + P ++G VIG+
Sbjct: 256 Q---ANFDRNEYGS-------------------RGGGGGGGGGIDVPVPRHSVGVVIGRN 293
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
G +IK+I+ ++G I+ G D I I
Sbjct: 294 GDMIKKIQNDAGVRIQFKQDDGTGPDKIAHI 324
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 101/267 (37%), Gaps = 42/267 (15%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G ++ + P K G IIGKGGE +KQL+ +++ I S+
Sbjct: 178 GQNGSLQEIMIPAGKAGLIIGKGGETIKQLQERAGV-------------KMILIQDGSQN 224
Query: 100 TNLFEDSGEFVSP--AQDALFRVHDRIVAEDSLADD--EFG-----ELTLITVRMLVPAD 150
TN+ + P Q A V D + D D E+G + + VP
Sbjct: 225 TNMDKPLRIVGEPFKVQQACEMVMDLLRERDQANFDRNEYGSRGGGGGGGGGIDVPVPRH 284
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
+G VIG+ G +I+ I+ + +I+ +D+ D++ + G P A I+
Sbjct: 285 SVGVVIGRNGDMIKKIQNDAGVRIQFKQDD-----GTGPDKIAHIMGPPDRCEHAARIIS 339
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
LL S + G + G FS+ P
Sbjct: 340 D-----------LLQSLKTGPPGPPGPGMPPGGRGRGRGQGPWGPPGGEMTFSI----PT 384
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
G VIG+GG +K I Q++GA +++
Sbjct: 385 HKCGLVIGRGGENVKAINQQTGAFVEI 411
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS--------TKEFFED 319
P G +G +IG+GG I +I+QESG +++ + ++ ++ K +D
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMPERVVSLTGSPDSVQKAKMLLDD 159
Query: 320 PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
I A R P S+ + +G I++P+ + G +IG+GG I +++ RA
Sbjct: 160 ----IVARGRGGP-PSQFHDNSNGQNGSLQEIMIPAGKAGLIIGKGGETIKQLQE--RAG 212
Query: 380 IRIL 383
++++
Sbjct: 213 VKMI 216
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 172/408 (42%), Gaps = 73/408 (17%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSS 96
GS DT + L P +G+IIGKGG V+Q+ S R+ PG D ++ TIY +
Sbjct: 34 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 92
Query: 97 SEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVI 156
E A R+ + + E+ D+E + +++L IG +I
Sbjct: 93 PEACGA-------------AAIRILEIVRKEEK--DNE------LPLKVLAHNALIGRLI 131
Query: 157 GKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE- 215
G+ G+ +++++ +T +I I L + D + + GE + +A QI +L +
Sbjct: 132 GRDGRNLKHVQDKTGTRIAISSMHE--LSPYNMDRTISIHGEVKGISEAEQQITEKLRQF 189
Query: 216 ---NPSRSQHLLLSSSSNIYQSSGVYLSAPL------VGSYGNYSARRDEASA------- 259
+ SQ L ++ L +P V G+Y + S
Sbjct: 190 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVSYQGSYFFKNVSQSVFFSGNSS 249
Query: 260 ---REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG---AEGDDCIIFIST 313
+ ++ L+ P+G +G +IG G I+ I + +GASI++ + A+ I+ +
Sbjct: 250 SNNTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGV-- 307
Query: 314 KEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMR 373
P A + + ++ + + +TT+I +P +G +IG+GG + E++
Sbjct: 308 ------PESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIGKGGVNVRELQ 361
Query: 374 SATRASIRIL------TNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
T + + I T+E +P V ITG+ SA ++
Sbjct: 362 RITSSEVTIPRQGELNTSEEIP---------VSITGTFFSNQSAQRKI 400
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQ--ESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
L+++ PA +G +IGKGG ++QI Q +S A + V G D + I + P
Sbjct: 40 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI-----YGAPE 94
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
AA+R+ E +E D + ++L +A IG LIGR G + ++ T I
Sbjct: 95 ACGAAAIRIL----EIVRKEEKDNELPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIA 150
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLP 438
I + + Y + + I G + S A Q+T +LR FE + A + + P
Sbjct: 151 ISSMHELS--PYNMDRTISIHGEVKGISEAEQQITEKLR--QFETDMAAMSQQSLYP 203
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 37/255 (14%)
Query: 58 IIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDAL 117
IIGKGG V ++R ++ + I +SE++PG ERI+ + +G DA+
Sbjct: 136 IIGKGGSHVNEIREKSGARITVSESIPGNPERILNV------------TGPL-----DAV 178
Query: 118 FRVHDRIVAEDSLADDEFGELTL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
+ IV + + D+ F + ++ +T++ ++P ++G +IGK G I+ I+ + A
Sbjct: 179 AKAFGLIVRQ--INDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGA 236
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA-SRLHENPS-RSQHLLLSSSSN 230
++ + L S + +L V+G + A + S L+ +PS S H
Sbjct: 237 KLHASEG----LLPGSTERVLNVSGVADAIHIATYYVGNSLLNSHPSYSSTHASYKQQRR 292
Query: 231 IYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR----LVCPAGNIGGVIGKGGGIIKQ 286
S+ Y P NY A+ SL+ P +G +IGKGG I +
Sbjct: 293 PMASTTYY---PPNTPVSNYGYPGPAAAPAPVSLQQTQNFYIPNDLVGSIIGKGGAKINE 349
Query: 287 IRQESGASIKVDSSG 301
IR SG IK+ G
Sbjct: 350 IRHVSGCQIKILEPG 364
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 124/329 (37%), Gaps = 85/329 (25%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I +R L+ +IGKGG + IR ++ A RI E +P + + +L V G
Sbjct: 122 IHMRALIVTQDASIIIGKGGSHVNEIREKSGA--RITVSESIPG---NPERILNVTGPLD 176
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I ++++ P ++ V +R
Sbjct: 177 AVAKAFGLIVRQINDEP--------------FEQPSV-------------------PGSR 203
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD-----------DCI- 308
+++ + P +G +IGK G IK+I++ SGA + G D I
Sbjct: 204 AVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVADAIH 263
Query: 309 ---IFISTKEFFEDPSPTITAALRLQPR--CSEKTERESGDPVI---------------- 347
++ PS + T A Q R + T PV
Sbjct: 264 IATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPAPVSL 323
Query: 348 --TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP-------KVAYEDEEM 398
T +P+ +G +IG+GGA I+E+R + I+IL P + E E M
Sbjct: 324 QQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERM 383
Query: 399 VQITGSLDVASSALSQVTLRLRANTFERE 427
V ITG + A Q+ ++L A+ E+E
Sbjct: 384 VTITGGI-----ANIQMAVQLLASRIEQE 407
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKE 315
E + +R + + +IGKGG + +IR++SGA I V S + I+ ++
Sbjct: 116 EPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVT--- 172
Query: 316 FFEDPSPTITAALRLQPR--CSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAIISE 371
P + A L R E E+ S G +T + ++P++++G LIG+ G+ I E
Sbjct: 173 ---GPLDAVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKE 229
Query: 372 MRSATRASIR 381
++ A+ A +
Sbjct: 230 IQEASGAKLH 239
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 56/288 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR +T +S+ VPG +R++T+ + G +
Sbjct: 44 RAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGALTGIS----- 98
Query: 107 GEFVSPAQDALFRVHDRIV--AEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
DA V D +V G +R+L+ +Q+G +IG+ G I+
Sbjct: 99 --------DAYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIK 150
Query: 165 NIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLL 224
I+ + ++ + + E LP S + +++V G P V+KA+ +I L ++ R +
Sbjct: 151 QIQDASGVRM-VAQKEMLP---QSTERIVEVQGTPEGVQKAVWEIGKCLIDDEQRGYGTV 206
Query: 225 LSSSSNIYQSSGVYLSAPLVG---SYG---------------------NYSARRDEASAR 260
L S + Q G + PL G SYG +Y RR+ S
Sbjct: 207 LYSPAVRVQ--GGAPAPPLNGTGASYGAPRSYNRTGNGADFTGGQSPSSYPPRRNGPSDG 264
Query: 261 EFSLR-----------LVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R + PA +G +IG+GG I +IR+ SGA I +
Sbjct: 265 GPPPRPEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISI 312
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T + +PAD +GC+IG+GG I IR + A+I I K H + + + + G PA
Sbjct: 278 TQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPH----DETGERMFTITGGPAA 333
Query: 202 VRKALVQIASRLH-ENPSRSQ 221
KAL + L E RSQ
Sbjct: 334 NEKALYLLYENLEAEKMRRSQ 354
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEM 398
E G+ + T I +P+ +GC+IGRGG+ ISE+R ++ A I I K +++ E M
Sbjct: 271 EDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIA------KAPHDETGERM 324
Query: 399 VQITGSLDVASSALSQVTLRLRANTFER 426
ITG AL + L A R
Sbjct: 325 FTITGGPAANEKALYLLYENLEAEKMRR 352
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 13/210 (6%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLR 70
KR+HF S + G + + G + L P G+IIGKGGE + L+
Sbjct: 33 KRSHFSSGESVCSGIEVEIENNNNNHIHHGETTYHMKILVPAVASGAIIGKGGETIASLQ 92
Query: 71 SETKSNIRISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
+T + +++S++ PG ER+ I S+E + EF+ + ++IV
Sbjct: 93 KDTGARVKMSKSHDFYPGTTERVCLITGSTEAIMVVM---EFIMDKIREKPDLTNKIVDT 149
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
DS E + V++LVP G +IGKGG I+ I+ E+ + ++I + P
Sbjct: 150 DSKQTQERDK----QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK---PTDVS 202
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENP 217
+ + + G+ + A I S++ E+P
Sbjct: 203 LQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++LVPA G +IGKGG+ I +++ +T A++++ K + + + + G +
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDF--YPGTTERVCLITGSTEAI 125
Query: 203 RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+ I ++ E P + ++ + S + R+
Sbjct: 126 MVVMEFIMDKIREKPDLTNKIVDTDS--------------------------KQTQERDK 159
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFISTKEFFED 319
++++ P G +IGKGG IKQI++ESG+ +++ + + CI I KE ++
Sbjct: 160 QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKN 219
Query: 320 PSPTITAALRLQPR 333
I + + P+
Sbjct: 220 ACKMILSKIVEDPQ 233
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTK-- 314
+ ++++ PA G +IGKGG I +++++GA +K+ S G C+I ST+
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 315 ----EFFEDPSPTITAALRLQPRCSEKT----ERESGDPVITTRILVPSAQIGCLIGRGG 366
EF D +R +P + K +++ + +ILVP++ G +IG+GG
Sbjct: 126 MVVMEFIMD-------KIREKPDLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGG 178
Query: 367 AIISEMRSATRASIRI 382
A I +++ + + ++I
Sbjct: 179 AFIKQIKEESGSYVQI 194
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 84/315 (26%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R CP+++ +IGK G+++ LR + + I++SE + ERI+ L +
Sbjct: 204 FRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERII----------LVKG 253
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
E V+ A F + R + E+ +DE + +++L+P +G +IGKGG
Sbjct: 254 PAENVAKA----FGLITRAILEE--PEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKF 307
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
+ I + A+ LK PL S D +L V G + A+ I+ + E+
Sbjct: 308 REIEENSAAK---LKAAEQPLPN-STDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKH 363
Query: 217 ------PSRSQHLLLSSS-----SNIYQSSGVYLSAPLVG--SYGNYSARRDEASA---- 259
P +Q L++++ +N Y ++G+ + P+ G + + R+ + SA
Sbjct: 364 KIVYYTPGNNQ--LMNNTMGLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHN 421
Query: 260 -----------------------------------REFSLRLVCPAGNIGGVIGKGGGII 284
+FS + NIG VIGKGG I
Sbjct: 422 QITTPVPTQLYTDEHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNI 481
Query: 285 KQIRQESGAS-IKVD 298
KQIR+ SG S +K++
Sbjct: 482 KQIRESSGCSYVKIE 496
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 238 YLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y S P+ N+ A R E S R+ CP VIGK G +I +R+++ A I+V
Sbjct: 183 YTSRPM----ANHQAER-ELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQV 237
Query: 298 DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRC-SEKTERESGDPV---ITTRILV 353
+ + + II + + P+ + A L R E+ E E + ++L+
Sbjct: 238 SENIKDVQERIILV------KGPAENVAKAFGLITRAILEEPEDEPASIMSRQYNLKVLI 291
Query: 354 PSAQIGCLIGRGGAIISEMRSATRASIR 381
P +G +IG+GG+ E+ + A ++
Sbjct: 292 PHPMVGYIIGKGGSKFREIEENSAAKLK 319
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 21/172 (12%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAV----- 72
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL--ITVRMLVPADQIGCVIGKGGQVI 163
F + + A F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 73 ---FHAVSMIA-FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+ IR T AQ+++ D L S + + V+G P + + QI + + E
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILE 172
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + P +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI-SEGSCP------ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 9/156 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+++ + +P E V ++G D + Q+
Sbjct: 135 VQV-AGDLLPN---STERAVTVSGVPDAIILCVRQI 166
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 136/310 (43%), Gaps = 49/310 (15%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLF 103
+V+R + K+G +IG+ GE++K+L T++ +R+ + G RIV I ++
Sbjct: 94 SVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISAT------- 146
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGG 160
E++ ++PA DA R+ + + + D ++ + + R+LVP Q +IGK G
Sbjct: 147 EETQAELAPAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQG 206
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA---------- 210
IQ ++ T IRI+ + L + + ++++ G V AL +
Sbjct: 207 TTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFLVDH 266
Query: 211 SRLH------------ENPSR------------SQHLLLSSSSNIYQSS-GVYLSA---P 242
S LH +N S+ +Q LLLS S + + + G YLS P
Sbjct: 267 SVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNGGRYLSYGHDP 326
Query: 243 LVGSYGNYSARRDEASA-REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
V + RR S + + + P +IG G I IR SGA + ++ +G
Sbjct: 327 SVCDPYSRDIRRPTVSLISKITQTMRIPLPQAEEIIGVRGQTIAHIRSVSGAMVVLEETG 386
Query: 302 AEGDDCIIFI 311
D+ ++ I
Sbjct: 387 NYLDEVLVSI 396
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSP 322
RLV +GG+IG+ G +IK++ + + A ++V D + ++ +T+E + +P
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELAP 155
Query: 323 TITAALRLQPRCSEK-------TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
+ AA+R+ ++ T SG + + R+LVP AQ LIG+ G I M+ +
Sbjct: 156 AMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQES 215
Query: 376 TRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
T +IRI+ + + +E +V+I G+ +AL V LR
Sbjct: 216 TGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLR 260
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 76/386 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI E
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGCE-------- 104
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGGQVI 163
A + V R + E + G + +++L+ +Q+G +IG+ G I
Sbjct: 105 ------AISRAYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKI 158
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
++I+ + ++ + + E LP S + +++V G P +++A+ +I L ++ R
Sbjct: 159 KHIQDVSGVRM-VAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDDWQRG--- 211
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+G L P+V + G AG GV G +
Sbjct: 212 -----------AGTVLYNPVVRTQG---------------------AGAAPGVTGTTNFV 239
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
Q R G S +V +G D F + + AA R P T E+G
Sbjct: 240 --QDRAPYGGS-RVTRTGNGAD----FSNGGPRPYNRRSDSDAAARGPP-----THDENG 287
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEMVQI 401
+ + T I +P+ +GC+IGRGG+ ISE+R + A I I K +++ E M I
Sbjct: 288 EEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIA------KAPHDETGERMFTI 341
Query: 402 TGSLDVASSALSQVTLRLRANTFERE 427
GS AL + L A R+
Sbjct: 342 MGSAKANERALFLLYENLEAEKMRRQ 367
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
DE GE + T + +PAD +GC+IG+GG I IR + A+I I K H + + +
Sbjct: 284 DENGE-EIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPH----DETGERM 338
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSS 228
+ G +AL + L R Q +S
Sbjct: 339 FTIMGSAKANERALFLLYENLEAEKMRRQQQAAQTS 374
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 25/176 (14%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG--------TNLFE 104
+++GSIIGK G+ +K+ R ++ + I IS+ C ERIVT+ S+E FE
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISDGT--CPERIVTVTGSTECILKAFSLICAKFE 78
Query: 105 DSGEFV-SPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
+ SP + AL +++ + +T+R++VPA Q G +IGK G I
Sbjct: 79 EMSSLSGSPTESALN--GQKVLPGQTPPP--------VTLRLIVPASQCGSLIGKAGSKI 128
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
+ IR T A +++ E LP S + + VAG V K + QI + E P +
Sbjct: 129 REIREITGASVQV-ASEMLP---NSTERTVTVAGTADAVTKCIYQICCVMLECPPK 180
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 25/169 (14%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE-------GDDCII--FI 311
++R++ +G +IGK G IK+ R++SGA I + D + E +CI+ F
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTECILKAFS 71
Query: 312 STKEFFEDPS-----PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
FE+ S PT +AL Q K P +T R++VP++Q G LIG+ G
Sbjct: 72 LICAKFEEMSSLSGSPT-ESALNGQ-----KVLPGQTPPPVTLRLIVPASQCGSLIGKAG 125
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+ I E+R T AS+++ +E +P E V + G+ D + + Q+
Sbjct: 126 SKIREIREITGASVQV-ASEMLPN---STERTVTVAGTADAVTKCIYQI 170
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAV 201
T M +P D IGCVIGKGGQ I IR + A I+I E S + + ++G P
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE-----GSKERCVSISGTPEA 360
Query: 202 V---------RKALVQIASRLHEN 216
+ R+ ++ ASRL N
Sbjct: 361 INLAQYLINTRQVSLRKASRLQSN 384
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 55 IGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
IG +IGKGG+ + ++R + + I+IS T G ER V+I + E NL +
Sbjct: 316 IGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQ 365
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 54 KIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPA 113
++GSIIGK G+ +K +R ++ + I IS+ C ERIVTI S N + G +
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGTIN--KAFGMICAKL 56
Query: 114 QDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
Q L + + I IT+R++VPA Q GC+IGKGG I+ IR T A
Sbjct: 57 QQDLQALPNSIPKPP------------ITMRLIVPATQCGCIIGKGGTKIKEIREATGAS 104
Query: 174 IRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
I++ E LP S + + ++G + + I L E P + L
Sbjct: 105 IQV-ASEMLP---SSTERAVTISGSADSIVDCMRNICQILLEAPPKGNTL 150
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G IK IR +SGA I + S G+ + + + I A L+
Sbjct: 2 VGSIIGKRGDHIKLIRDQSGAKINI-SDGSCPERIVTITGSIGTINKAFGMICAKLQQD- 59
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
+ P IT R++VP+ Q GC+IG+GG I E+R AT ASI++ +E +P
Sbjct: 60 --LQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQV-ASEMLPS-- 114
Query: 393 YEDEEMVQITGSLD 406
E V I+GS D
Sbjct: 115 -STERAVTISGSAD 127
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 40/149 (26%)
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +IGK G I+ IR ++ A+I I D P + ++ + G + KA I
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINI-SDGSCP------ERIVTITGSIGTINKAFGMIC 53
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++L ++ A + ++RL+ PA
Sbjct: 54 AKLQQD---------------------------------LQALPNSIPKPPITMRLIVPA 80
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDS 299
G +IGKGG IK+IR+ +GASI+V S
Sbjct: 81 TQCGCIIGKGGTKIKEIREATGASIQVAS 109
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSE 98
R + P + G IIGKGG +K++R T ++I++ SE +P ER VTI S++
Sbjct: 74 MRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGSAD 127
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 20/171 (11%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK G+ +K +R ++ + I IS+ C ERIVTI S+ N
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGTIN----------- 57
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
A + ++ +D A IT+R++VPA Q GC+IGKGG I+ IR T A
Sbjct: 58 --KAFIMICAKL-QQDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGA 114
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
I++ E LP S + + ++G + + I L E P++ L
Sbjct: 115 SIQV-ASEMLP---SSTERAVTISGSADSIVDCMRNICQILLEAPAKGNTL 161
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQP 332
+G +IGK G IK IR +SGA I + S G+ + + + I A L+
Sbjct: 13 VGSIIGKRGDHIKLIRDQSGAKINI-SDGSCPERIVTITGSTGTINKAFIMICAKLQQD- 70
Query: 333 RCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVA 392
+ P IT R++VP+ Q GC+IG+GG+ I E+R AT ASI++ +E +P
Sbjct: 71 --LQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQV-ASEMLPS-- 125
Query: 393 YEDEEMVQITGSLD 406
E V I+GS D
Sbjct: 126 -STERAVTISGSAD 138
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 40/149 (26%)
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G +IGK G I+ IR ++ A+I I D P + ++ + G + KA + I
Sbjct: 12 EVGSIIGKRGDHIKLIRDQSGAKINI-SDGSCP------ERIVTITGSTGTINKAFIMIC 64
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++L ++ A + ++RL+ PA
Sbjct: 65 AKLQQD---------------------------------LQALPNSIPKPPITMRLIVPA 91
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKVDS 299
G +IGKGG IK+IR+ +GASI+V S
Sbjct: 92 TQCGCIIGKGGSKIKEIREATGASIQVAS 120
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 39 IGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSS 97
I R + P + G IIGKGG +K++R T ++I++ SE +P ER VTI S+
Sbjct: 78 IPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSA 137
Query: 98 E 98
+
Sbjct: 138 D 138
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 125 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 176
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 177 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 236
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 237 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 296
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 297 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 342
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 197
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 198 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 257
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 258 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 296
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 137 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 196
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 197 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 255
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 256 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 295
>gi|198427864|ref|XP_002125995.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K
[Ciona intestinalis]
Length = 402
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 37/208 (17%)
Query: 12 RTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRS 71
R+ FQ D GG R P D+ E R L P G+IIGKGG ++ LR
Sbjct: 29 RSSFQHDRFHQGG---REPSDKIE----------LRVLIPSHTAGAIIGKGGANIRDLRQ 75
Query: 72 ETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLA 131
E +N+++ ++ ERIV+ + + ED+ +AL ++R+ + +
Sbjct: 76 EFNANVQVPDSHGF--ERIVSAVAKT-----IEDAANICGKVVEAL---NERMHHPEKVG 125
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+RMLV Q G +IG G I+ +R T A I++ ++ C S D
Sbjct: 126 ----------CLRMLVHKSQAGTIIGLKGSRIKELREMTGANIKVNQE----CCPESTDR 171
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSR 219
+ QV G VV K + +I L + P +
Sbjct: 172 VCQVRGTADVVVKCVARILEHLQQAPPK 199
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 34/204 (16%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCIIFISTKEFFED 319
+ LR++ P+ G +IGKGG I+ +RQE A+++V DS G E I + + ED
Sbjct: 47 KIELRVLIPSHTAGAIIGKGGANIRDLRQEFNANVQVPDSHGFER----IVSAVAKTIED 102
Query: 320 PSP---TITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
+ + AL + EK V R+LV +Q G +IG G+ I E+R T
Sbjct: 103 AANICGKVVEALNERMHHPEK--------VGCLRMLVHKSQAGTIIGLKGSRIKELREMT 154
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP-- 434
A+I++ E P+ + + Q+ G+ DV ++++ L+ A P
Sbjct: 155 GANIKV-NQECCPEST---DRVCQVRGTADVVVKCVARILEHLQ----------QAPPKG 200
Query: 435 PVLPYVPMSLDITDGSKYGNRDNQ 458
P+ Y P D D YG N+
Sbjct: 201 PIKNYDPNCFD--DSYDYGGYANE 222
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 6/87 (6%)
Query: 321 SPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASI 380
S TI A L+LQ + SE +E+ + TR+LVPS+++GC++G+G I+EMR +A I
Sbjct: 61 SQTIEAILQLQNKTSEFSEKG-----MITRLLVPSSKVGCILGQGSQDINEMRR-LQAEI 114
Query: 381 RILTNENVPKVAYEDEEMVQITGSLDV 407
R+ PK A EDEE+VQ S ++
Sbjct: 115 RVYPKNEKPKCASEDEELVQANNSPNM 141
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
EF E +IT R+LVP+ ++GC++G+G Q I +R +A+IR+ P CA +EL+
Sbjct: 76 EFSEKGMIT-RLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYPKNEKPKCASEDEELV 133
Query: 194 QVAGEP 199
Q P
Sbjct: 134 QANNSP 139
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 170/394 (43%), Gaps = 63/394 (15%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L +G+IIG+ G ++Q+ +++ + + + G E+ +TIY + E
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCT 184
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
A R+ + V + + GE+ L ++L + IG +IGK G
Sbjct: 185 -------------SACKRILE--VMQQEANNTNKGEICL---KILAHNNLIGRIIGKSGN 226
Query: 162 VIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
I+ I +T +I + + D + + + + ++ V G + + QI+++L +EN
Sbjct: 227 TIKRIMQDTDTKITVSSIND----INSFNLERIITVKGSIDNMSRGESQISAKLRQSYEN 282
Query: 217 ------------PSRSQHLLLSSSSN---IYQSSGVYLSAPLVGSYGNYSARRDE----- 256
P ++S++ N SG+Y + SY Y
Sbjct: 283 DLQALAPQSIMFPGLHPMAMMSTAGNGMGFAGRSGMYPGS----SYPMYQPPTAPGVPPG 338
Query: 257 ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEF 316
+S + + L P +G +IG G I+ I + SGAS+K+ + E D + + ++
Sbjct: 339 SSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEADKPLEQQTERKV 396
Query: 317 FEDPSPTITAALRLQPRCSEKTERE-----SGDPVITTRILVPSAQIGCLIGRGGAIISE 371
+P A + Q EK E + D +T ILVPSAQ+G +IG+GG + E
Sbjct: 397 TIVGTPE--AQWKAQYLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNVRE 454
Query: 372 MRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
++ T + I++ E+ ++E V I G
Sbjct: 455 LQRVTGSIIKL--PEHTAATPVDEETTVHIIGPF 486
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
+F LRL+ + +G +IG+ G I+QI Q S A + V G + +P
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGS----LEKAITIYGNP 180
Query: 321 SPTITAALR-LQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+A R L+ E G+ I +IL + IG +IG+ G I + T
Sbjct: 181 ENCTSACKRILEVMQQEANNTNKGE--ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 238
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHPPVLPY 439
I + + ++ ++ E ++ + GS+D S SQ++ +LR + ALA + P
Sbjct: 239 ITVSSINDIN--SFNLERIITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPG 296
Query: 440 V-PMSLDITDGSKYGNRDNQSRGRGNSYATGNLP 472
+ PM++ T G+ G G+SY P
Sbjct: 297 LHPMAMMSTAGNGMGFAGRSGMYPGSSYPMYQPP 330
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 58 GALVHQRAVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERP 113
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ E + A+ L ++ DR +D G T+ + L+PA
Sbjct: 114 CVLTGMPES----------IEQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEI--LIPAS 161
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIGKGG+ I+ ++ T ++ +++D LP A D+ L++ G+ V++A +
Sbjct: 162 KVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVL 218
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G ++S+R S+ + P
Sbjct: 219 EIIREKD----------------------QADFRGVRNDFSSRMGGG-----SIEVSVPR 251
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 252 FAVGIVIGRNGEMIKKIQNDAGVRIQ 277
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 114/273 (41%), Gaps = 32/273 (11%)
Query: 44 TVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERIVTIYSSSEGT 100
T+ L P K+G +IGKGGE +KQL+ T + + + P G D+ + + +
Sbjct: 152 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQ 211
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
E E + A FR + +D + ++ + VP +G VIG+ G
Sbjct: 212 QAREMVLEIIREKDQADFR---------GVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNG 262
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
++I+ I+ + +I+ D+ +S + + QV G P + A I+ + R
Sbjct: 263 EMIKKIQNDAGVRIQFKPDD-----GISSERVAQVMGLPDRCQHAAHIISELILTAQERD 317
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
L+ + + G + VG+ G + PA G VIGKG
Sbjct: 318 GFGSLAVARGRGRGRGDWS----VGTPGGMQ-----------EITYTVPADKCGLVIGKG 362
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFIST 313
G IK I Q+SGA +++ + D + I T
Sbjct: 363 GENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 395
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 134/351 (38%), Gaps = 67/351 (19%)
Query: 92 TIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT----LITVRMLV 147
++Y +D G VS A R +RI ++ G L +IT V
Sbjct: 21 SVYGYGVQKRPLDDGGLRVSGLHGAQIRDTERI-------GNQLGALVHQRAVITEEFKV 73
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDE----HLPLCALSFDELLQVAGEPAVVR 203
P +G +IG+GG+ I I+ E+ +I+I D P E ++ A +
Sbjct: 74 PDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGMPESIEQA------K 127
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
+ L QI R P H + +S I +
Sbjct: 128 RLLGQIVDRCRNGPGF--HNDVDGNSTIQE------------------------------ 155
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIFISTKEF-FEDP 320
++ PA +G VIGKGG IKQ+++ +G + + G G D + I+ F +
Sbjct: 156 --ILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDAFKVQQA 213
Query: 321 SPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGGAIISEMRSATR 377
+ +R + + + R + + + VP +G +IGR G +I ++++
Sbjct: 214 REMVLEIIREKDQADFRGVRNDFSSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQN--D 271
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREG 428
A +RI + P E + Q+ G D A + + L ER+G
Sbjct: 272 AGVRI---QFKPDDGISSERVAQVMGLPDRCQHA-AHIISELILTAQERDG 318
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 11 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 62
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 63 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 122
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 123 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 182
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 183 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 228
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 23 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 82
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCS--------------EKTERESGDPVI 347
FI+ K E ++ + T ++ LQP+ + T+ DP+
Sbjct: 83 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 141
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 142 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 181
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 26 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 83
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 84 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 143
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 144 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 182
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + ++ L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKTLAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLTPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 27/274 (9%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L ++ G +IG+ G+++ +R ET + IS PG ERI+T+ S + N +
Sbjct: 84 RVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERILTV--SGKLDNCAKAL 141
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
F D+ ++ + A+ T I +R+LVP Q+G +IG G IQ I
Sbjct: 142 SYFAQALCDSTIETYNYFPLKQLSANPCIENETTI-LRLLVPNAQMGTLIGSKGLRIQQI 200
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS-------- 218
++ + I LP S + L+++ G + AL IA L E+ S
Sbjct: 201 QSNYHISM-IASKSFLPG---SNERLVELQGTVNDLYDALRIIARCLIEDISALGNTNYY 256
Query: 219 --RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGV 276
R H S + + ++GV + P G N++ + + S P +G +
Sbjct: 257 VPRGHH---SQYNGVNTTNGVSSTTPTNGR--NFARKSSHIATTSLSF----PNDIVGAL 307
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIF 310
IGK G I+ +R+ SGA+I + S EG + IF
Sbjct: 308 IGKNGSRIQGVRKVSGATIGI-SEEVEGKNERIF 340
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 28/205 (13%)
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
P DE+ ++ + S+ +N P + HD+ SL D G+ +I V
Sbjct: 25 PTTDEQPTSVSTESQPSNSESSEQAEEVPVSASSSTNHDQSTTLPSLNDKSNGD-AVINV 83
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
R+LV A + GC+IG+ G+VI IR ET + I + L S + +L V+G+
Sbjct: 84 RVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISR-----LQPGSHERILTVSGKLDNCA 138
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
KAL A L ++ + Y PL N +
Sbjct: 139 KALSYFAQALCDSTIET-----------------YNYFPLKQLSANPCIENETT-----I 176
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIR 288
LRL+ P +G +IG G I+QI+
Sbjct: 177 LRLLVPNAQMGTLIGSKGLRIQQIQ 201
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 339 ERESGDPVITTRILVPSAQIGCLIGRGGAIISEMR--SATRASIRILTNENVPKVAYEDE 396
++ +GD VI R+LV + + GCLIG+ G +I +R + T+A I L E
Sbjct: 73 DKSNGDAVINVRVLVSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQ-------PGSHE 125
Query: 397 EMVQITGSLDVASSALSQVTLRLRANTFE 425
++ ++G LD + ALS L +T E
Sbjct: 126 RILTVSGKLDNCAKALSYFAQALCDSTIE 154
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCS--------------EKTERESGDPVI 347
FI+ K E ++ + T ++ LQP+ + T+ DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 22 NGGSKRRNPGDET---EQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
N GS + P E + G + R L + IIG+GG V ++R ++ + +
Sbjct: 55 NEGSPKTAPSSEPTAPAKPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVT 114
Query: 79 ISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGEL 138
+SE++PG ERI+ + SG DA+ + IV + D+ F
Sbjct: 115 VSESIPGNPERILNV------------SGPL-----DAVAKAFGLIVRR--INDEPFDVP 155
Query: 139 TL-----ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
++ +T++ ++P ++G VIGKGG I+ I+ + A++ + LP S + +L
Sbjct: 156 SVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLN-ASEAMLP---GSTERVL 211
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
V+G V A+ I + L E Q S+++ Y+ S S G
Sbjct: 212 SVSGVADAVHIAVYYIGTILLE----YQDRYPSNATGSYKQS---------QSRGPPPNS 258
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
+ ++ P +G +IG+GG I +IR +S I+V G
Sbjct: 259 NAPPPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPG 306
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 60/303 (19%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I++R L+ +IG+GG + IR ++ A R+ E +P + + +L V+G
Sbjct: 80 ISMRSLIVTQDASIIIGRGGAHVNEIREKSSA--RVTVSESIPG---NPERILNVSGPLD 134
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
V KA I R+++ P P V +R
Sbjct: 135 AVAKAFGLIVRRINDEP---------------------FDVPSV------------PGSR 161
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD-------------- 306
+++ + P +G VIGKGG IK+I++ SGA + + G
Sbjct: 162 AVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVH 221
Query: 307 -CIIFISTKEF-FED--PSPTITAALRLQPRCSEKTERESGDP-VITTRILVPSAQIGCL 361
+ +I T ++D PS + + Q R P + T +I +P+A +G +
Sbjct: 222 IAVYYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQIFIPNALVGAI 281
Query: 362 IGRGGAIISEMRSATRASIRIL-TNENVP--KVAYEDEEMVQITGSLDVASSALSQVTLR 418
IGRGG+ I+E+RS + IR+ VP A +E +V ITG D ++A++ + R
Sbjct: 282 IGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLYSR 341
Query: 419 LRA 421
+ A
Sbjct: 342 VEA 344
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 10/125 (8%)
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
++ S+R + + +IG+GG + +IR++S A + V S + I+ +S
Sbjct: 78 QQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVS------G 131
Query: 320 PSPTITAALRLQPR--CSEKTERES--GDPVITTRILVPSAQIGCLIGRGGAIISEMRSA 375
P + A L R E + S G +T + ++P++++G +IG+GG+ I E++ A
Sbjct: 132 PLDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEA 191
Query: 376 TRASI 380
+ A +
Sbjct: 192 SGARL 196
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 64/404 (15%)
Query: 11 KRTHFQSDAATNGGSKRRN-PGDETEQRG--IGSEDTVYRYL-CPLRKIGSIIGKGGEIV 66
KR H D + +KR N PG+ G G + + +L P +G IIG+GGE +
Sbjct: 58 KRPH---DNGEDTPAKRLNMPGNPISALGNNHGPDSVIIDHLEVPDSCVGLIIGRGGESI 114
Query: 67 KQLRSETKSNIRISETVP----GCDERIVTIYSSSEG--------TNLFEDSGEFVSPAQ 114
Q++SE+ +++S+T P G R T+ S +++ +GE +S ++
Sbjct: 115 NQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKAKQMISSIVTKAGETMSLSR 174
Query: 115 -DALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQ 173
++ + V S G IT M +P + G VIGKGG+ I++++ +
Sbjct: 175 GQPVYGSNGPSVLYSSSGSGAAGSDKTITTEMFIPGTKCGLVIGKGGETIKSLQERAGVK 234
Query: 174 IRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQ 233
+ ++++ + P + L++ GEP V+ A +L E S+H + N Y
Sbjct: 235 MVMIQESNQP---SGLPKPLRIIGEP-----NKVEYAKQLIEEIMNSKHDM-----NEY- 280
Query: 234 SSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGA 293
GS + S + E ++ P +G +IG+GG I+++ ESGA
Sbjct: 281 -----------GSLTDASKKIGE---------VIVPKHAVGSIIGRGGETIRRLTSESGA 320
Query: 294 SI--KVDSSGAEGDDCIIFISTKEFFEDPSPTIT------AALRLQPRCSEKTERESGDP 345
I K+ + + T E + + IT A++ L+ + E D
Sbjct: 321 RIQFKIGEDHNAPERTAVISGTMEQIDRATRMITDLVNKSASVLLEESAYDCCNFEGCDS 380
Query: 346 VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVP 389
I + VP+ + G +IG+GG I ++ + A + L+ E P
Sbjct: 381 DI-FYMHVPANKTGLVIGKGGETIKQINMDSGARVE-LSRETAP 422
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEF 109
P R +G +IGKGGE + QL+++T+ ++IS+ G ER VT+ + +
Sbjct: 104 IPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQ----------Q 151
Query: 110 VSPAQDALFRVHDRIVAEDSLADDEFGEL-TLITVRMLVPADQIGCVIGKGGQVIQNIRT 168
+ A+ + + +R + + ++ T+ M+VP + G VIGK G+ I+N++
Sbjct: 152 IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQE 211
Query: 169 ETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA----LVQIASR 212
E ++ +++ + P D+ L+++GEP+ V KA LV I SR
Sbjct: 212 ENGVKMVLIQQSNNPTPE---DKPLRISGEPSRVEKARQAVLVLINSR 256
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 24 GSKRRNPGD------ETEQRGIGSEDTVY--RYLCPLRKIGSIIGKGGEIVKQLRSETKS 75
G R+ P D +T++ S +T Y + L P G+IIGKGGE + L+ +T +
Sbjct: 16 GDSRKRPLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGA 75
Query: 76 NIRISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLAD 132
+++S++ PG ER+ I S+E + EF+ + ++IV DS
Sbjct: 76 RVKMSKSHDFYPGTTERVCLITGSTEAIMVVM---EFIMDKIREKPDLTNKIVDTDSKQT 132
Query: 133 DEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDEL 192
E + V++LVP G +IGKGG I+ I+ E+ + ++I + P +
Sbjct: 133 QERDK----QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQK---PTDVSLQERC 185
Query: 193 LQVAGEPAVVRKALVQIASRLHENP 217
+ + G+ + A I S++ E+P
Sbjct: 186 ITIIGDKENNKNACKMILSKIVEDP 210
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 31/194 (15%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++LVPA G +IGKGG+ I +++ +T A++++ K + + + + G +
Sbjct: 46 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDF--YPGTTERVCLITGSTEAI 103
Query: 203 RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+ I ++ E P + ++ + S + R+
Sbjct: 104 MVVMEFIMDKIREKPDLTNKIVDTDS--------------------------KQTQERDK 137
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFISTKEFFED 319
++++ P G +IGKGG IKQI++ESG+ +++ + + CI I KE ++
Sbjct: 138 QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITIIGDKENNKN 197
Query: 320 PSPTITAALRLQPR 333
I + + P+
Sbjct: 198 ACKMILSKIVEDPQ 211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 242 PLVGSYGNYSARRDEASARE--FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
PL N +R S+ E + ++++ PA G +IGKGG I +++++GA +K+
Sbjct: 22 PLDSDPENEQTKRSHFSSGETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSK 81
Query: 300 S-----GAEGDDCIIFISTK------EFFEDPSPTITAALRLQPRCSEKT----ERESGD 344
S G C+I ST+ EF D +R +P + K +++ +
Sbjct: 82 SHDFYPGTTERVCLITGSTEAIMVVMEFIMD-------KIREKPDLTNKIVDTDSKQTQE 134
Query: 345 PVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
+ILVP++ G +IG+GGA I +++ + + ++I
Sbjct: 135 RDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQI 172
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 158/389 (40%), Gaps = 90/389 (23%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGK G+ V LR ET +S+ VPG +R++T+ + GT
Sbjct: 230 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGALSGT------ 283
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLIT------VRMLVPADQIGCVIGKGG 160
R + + + G +++ +R+L+ +Q+G +IG+ G
Sbjct: 284 -----------ARAYALVAKGLLEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIGRQG 332
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++I+ + ++ + + E LP S + +++V G P + KA+ +I L ++ R
Sbjct: 333 LKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIEKAIWEIGKCLIDDWQRG 388
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLV-GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
+G L P V S G+ S + + ++ ++ R GN
Sbjct: 389 --------------TGTILYNPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGN------- 427
Query: 280 GGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTE 339
GA D SG G S + + P +T
Sbjct: 428 ------------GADFS-DQSGGYGRRSNPDTSNRGY-----PLVT-------------- 455
Query: 340 RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EE 397
E G+ + T I +P+ +GC+IGRGG I+E+R ++ A I ++ K +++ E
Sbjct: 456 -EDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARI------SIAKAPHDETGER 508
Query: 398 MVQITGSLDVASSALSQVTLRLRANTFER 426
M I GS AL + L A R
Sbjct: 509 MFTIMGSAQANEKALYLLYENLEAEKTRR 537
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 147 VPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+PAD +GC+IG+GG I IR + A+I I K H + + + + G KAL
Sbjct: 468 IPADMVGCIIGRGGTKITEIRRSSGARISIAKAPH----DETGERMFTIMGSAQANEKAL 523
Query: 207 VQIASRLHENPSRSQHL 223
+ L +R L
Sbjct: 524 YLLYENLEAEKTRRSQL 540
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 164/388 (42%), Gaps = 80/388 (20%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI
Sbjct: 50 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGC--------- 100
Query: 107 GEFVSPAQDALFRVHD---RIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGG 160
DA+ R + R + E + A G + +++L+ +Q+G +IG+ G
Sbjct: 101 --------DAISRAYAIVARALLEGAPAMGMGGVVQSNGTHPIKLLISHNQMGTIIGRQG 152
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I++I+ + ++ + + E LP S + +++V G P +++A+ +I L ++ R
Sbjct: 153 LKIKHIQDASGVRM-VAQKEMLPQ---STERIVEVQGTPEGIQRAIWEICKCLVDDWQRG 208
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
+G L P+V + S + + FS +G
Sbjct: 209 --------------TGTVLYNPVVRT--QPSGSGNASGGAGFS---------------QG 237
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTER 340
G R + G S +V +G D F + + AALR P T
Sbjct: 238 SG-----RSDYGGSPRVMRTGNGAD----FSNGNSRPYNRRSDSDAALRGPP-----THD 283
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYED--EEM 398
E+G+ + T I +P+ +GC+IGR G+ ISE+R + A I ++ K +++ E M
Sbjct: 284 ENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARI------SIAKAPHDETGERM 337
Query: 399 VQITGSLDVASSALSQVTLRLRANTFER 426
I G+ SAL + L A R
Sbjct: 338 FTIMGTAKANESALFLLYENLEAEKMRR 365
>gi|324502127|gb|ADY40937.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 341
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 41/336 (12%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P +G +IG+GGE + Q++S++ +++S G + R T+ +GT + + +
Sbjct: 41 PDHCVGLVIGRGGEQISQIQSQSNCRVQMSPESDGNNMRQCTL----QGTKMAVERAK-- 94
Query: 111 SPAQDALFRVHDRIVAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTE 169
S QD + R +R D G IT ML+P + G VIGKGG+ I+NI+ +
Sbjct: 95 SMIQDVIARAGNRPPPNRGHFDGGMSGGGRQITHEMLIPGAKCGLVIGKGGETIKNIQEQ 154
Query: 170 TRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSS 229
++ ++++ + + L++ GEP V A R+ E
Sbjct: 155 AGVKMVMIQETQE---SGGQPKPLRIIGEP-----DKVDTARRMVE-------------- 192
Query: 230 NIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL-RLVCPAGNIGGVIGKGGGIIKQIR 288
+I QS + G + S+ + P ++G +IGKGG IK++
Sbjct: 193 DILQSREDHPPGQGYGGGYARGGYGMGGGGGQRSIGEGIVPRASVGMIIGKGGETIKRLA 252
Query: 289 QESGASI--KVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
ESGA I K D D C + T E I A + K+ SG +
Sbjct: 253 AESGAKIQFKPDEDQTTPDRCAVIQGTTE-------QIAKATQFISELVNKSGAGSGAEI 305
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
VP+ + G +IG+GG I ++ + + A + +
Sbjct: 306 FYMH--VPANKTGLVIGKGGETIKQICAESGAHVEL 339
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 33/180 (18%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
L P + +G+ G VK++R E+ + I ISE C ERI+T+ +
Sbjct: 101 LWPPHAHEASLGRKGTSVKRIREESGARINISEG--NCPERIITLTGPT----------- 147
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGKGG 160
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGKGG
Sbjct: 148 ------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGG 199
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
I+ IR T AQ+++ D + S + + +AG P V + + QI + E S+S
Sbjct: 200 CKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQS 255
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 277 IGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSE 336
+G+ G +K+IR+ESGA I + + T F+ + I L S
Sbjct: 111 LGRKGTSVKRIREESGARINISEGNCPERIITLTGPTNAIFKAFA-MIIDKLEEDINSSM 169
Query: 337 KTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDE 396
+ P +T R++VP+ Q G LIG+GG I E+R +T A +++ + +P E
Sbjct: 170 TNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STE 225
Query: 397 EMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYVPMSLDITDGSKYGNR 455
+ I G + + Q+ L L + +G + +PY PM + G +
Sbjct: 226 RAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQPMPAS-SPVICAGGQ 280
Query: 456 DNQSRGRGNSYATGNL--PGRDSYGSYG 481
D S G +AT +L P D+Y G
Sbjct: 281 DRCSDAAGYPHATHDLEGPPLDAYSIQG 308
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 37/142 (26%)
Query: 156 IGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+G+ G ++ IR E+ A+I I + + P + ++ + G + KA I +L E
Sbjct: 111 LGRKGTSVKRIREESGARINI-SEGNCP------ERIITLTGPTNAIFKAFAMIIDKLEE 163
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
+ + S N +A AS +LRLV PA G
Sbjct: 164 D--------------------------INSSMTNSTA----ASRPPVTLRLVVPATQCGS 193
Query: 276 VIGKGGGIIKQIRQESGASIKV 297
+IGKGG IK+IR+ +GA ++V
Sbjct: 194 LIGKGGCKIKEIRESTGAQVQV 215
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 56/258 (21%)
Query: 74 KSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAE------ 127
KS RI+ + C ERIVTI + DA+F+ I +
Sbjct: 23 KSGARINISEGNCPERIVTITGPT-----------------DAIFKAFAMIAYKFEEDII 65
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
+S+++ +T+R++VPA Q G +IGKGG I+ IR T AQ+++ D +
Sbjct: 66 NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD----MLPN 121
Query: 188 SFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL----------LLSSSSNIYQSSGV 237
S + + ++G P + + + QI + E+P + + ++ + Y G
Sbjct: 122 STERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 181
Query: 238 Y------------------LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGK 279
Y P +G N + +AS + L P IG +IG+
Sbjct: 182 YAIPHPDQLTKLHQLAMQQTPFPPLGQT-NPAFPGLDASPPASTHELTIPNDLIGCIIGR 240
Query: 280 GGGIIKQIRQESGASIKV 297
G I +IRQ SGA IK+
Sbjct: 241 QGTKINEIRQMSGAQIKI 258
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 52/215 (24%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + +
Sbjct: 81 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 140
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H + +
Sbjct: 141 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 200
Query: 128 DSL-----ADDEFGEL----TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK 178
+ F L T + +P D IGC+IG+ G I IR + AQI+I
Sbjct: 201 TPFPPLGQTNPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 260
Query: 179 DEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
S + + + G PA + A I +RL
Sbjct: 261 ATE-----GSSERQITITGTPANISLAQYLINARL 290
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 342 SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQI 401
+ P +T R++VP++Q G LIG+GG+ I E+R +T A +++ + +P E V I
Sbjct: 74 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTI 129
Query: 402 TGSLDVASSALSQVTLRL 419
+G+ D + Q+ + +
Sbjct: 130 SGTPDAIIQCVKQICVVM 147
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 50 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 101
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 102 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 161
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 162 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 221
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 222 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 267
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 122
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 123 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 182
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 183 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 220
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 62 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 122 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 180
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 181 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 220
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 23 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 74
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 75 KDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 134
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 135 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 194
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 195 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 240
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 35/173 (20%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD--------EHLPLCALSFDELLQ 194
+++L+P+ G +IGKGGQ I ++ ET A I++ K E + L + + L
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 97
Query: 195 VAGEPAVVRKALVQIASRLHE----------NPSRSQHLLLSSSSNIYQSSGVYLSAPLV 244
V G A + + Q ++ NP R + L SS + S S P+
Sbjct: 98 VHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSP----SDPMT 153
Query: 245 GSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
S N ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 154 TSRAN-------------QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 193
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 35 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 94
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 95 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 153
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 154 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 193
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK E VK++R E+ + ISE C ERI+T+ + +F+
Sbjct: 17 RLLMHGKEVGSIIGKNEESVKRIREESGARFSISEG--NCPERIITLTGPT--CAIFKAF 72
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
++ ++ + S+ + +T+R++VPA Q G +IGKGG I+ I
Sbjct: 73 AMMINKLEEDI---------NSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
R T AQ+++ D + S ++ + VA P V + + QI + E
Sbjct: 124 RESTGAQVQVSGD----MLPNSTEQAITVAVVPQSVTECVQQICLVMLE 168
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 25/229 (10%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE-------GDDCIIFISTK 314
++RL+ +G +IGK +K+IR+ESGA + G C IF +
Sbjct: 14 LTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEGNCPERIITLTGPTCAIFKAFA 73
Query: 315 EFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRS 374
I +++ + P +T R++VP+ Q G LIG+GG I E+R
Sbjct: 74 MMINKLEEDINSSM--------TNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRE 125
Query: 375 ATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAAHP 434
+T A +++ + + +P E+ + + + + Q+ L + T + P
Sbjct: 126 STGAQVQV-SGDMLPN---STEQAITVAVVPQSVTECVQQICLVM-LETLPQCPQGRVMP 180
Query: 435 PVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
+PY PM + + G +D S G +AT +L P D+ + G
Sbjct: 181 --IPYQPMPAS-SPVTCAGGQDRGSDAAGYPHATRDLGVPPLDACSTQG 226
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 37/167 (22%)
Query: 131 ADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFD 190
A E G +T+R+L+ ++G +IGK + ++ IR E+ A+ I + + P +
Sbjct: 4 AVTESGLNVTLTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSI-SEGNCP------E 56
Query: 191 ELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNY 250
++ + G + KA + ++L E+ + S N
Sbjct: 57 RIITLTGPTCAIFKAFAMMINKLEED--------------------------INSSMTNS 90
Query: 251 SARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+A AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 91 TA----ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 181/400 (45%), Gaps = 64/400 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVG--------------------SYGNYSARRDEASA 259
++ + + S + G+ L+A VG YG++ +A
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYGSFM----QAPE 404
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
+E +++ PA +G +IGK G IKQ+ + + ASIK+ + + T
Sbjct: 405 QEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----P 459
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A
Sbjct: 460 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAA 519
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
+ ++ + P D+ +V+I G +S ++Q +R
Sbjct: 520 EV-VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|350646767|emb|CCD58488.1| soluble guanylate cyclase gcy, putative [Schistosoma mansoni]
Length = 1102
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 29/178 (16%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGTNL 102
++ L P G+IIGK GE ++ ++ +T + +++S + PG ER+ I + E
Sbjct: 6 FKILVPNVAAGAIIGKKGEAIETIKRQTGARLKMSRADDFYPGTTERVCLIIGTLE---- 61
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
A ++HD ++A+ S +T V++LVP G +IGK G
Sbjct: 62 -------------ACIQLHDYVMAKISKRPQNIAIITPTGVKILVPDSTAGIIIGKFGNF 108
Query: 163 IQNIRTETRAQIRI---LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
I+ I+ E+ A I++ KD L F+ + + GE RKA+ I ++ ENP
Sbjct: 109 IERIKEESNAFIQVSQRPKDIRL------FERCIVITGELKERRKAVEMILYKILENP 160
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
E +++ P G +IGK G I+ I++++GA +K+ + DD + T E
Sbjct: 3 ELHFKILVPNVAAGAIIGKKGEAIETIKRQTGARLKM----SRADD--FYPGTTERVCLI 56
Query: 321 SPTITAALRLQPRCSEKTERESGDPVITT----RILVPSAQIGCLIGRGGAIISEMRSAT 376
T+ A ++L K + + I T +ILVP + G +IG+ G I ++ +
Sbjct: 57 IGTLEACIQLHDYVMAKISKRPQNIAIITPTGVKILVPDSTAGIIIGKFGNFIERIKEES 116
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRAN 422
A I++ PK E + ITG L A+ + ++ N
Sbjct: 117 NAFIQV---SQRPKDIRLFERCIVITGELKERRKAVEMILYKILEN 159
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCS--------------EKTERESGDPVI 347
FI+ K E ++ + T ++ LQP+ + T+ DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTIEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 157/383 (40%), Gaps = 76/383 (19%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R + ++ G IIGKGG+ V LR ET +S+ V G +R++TI +
Sbjct: 53 RAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDA------- 105
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT---LITVRMLVPADQIGCVIGKGGQVI 163
VS A + V R + E + + G ++ +++L+ +Q+G VIG+ G I
Sbjct: 106 ---VSKA----YAVVARSLLEGAPSVGMGGVISANGTHPIKLLISHNQMGTVIGRQGLKI 158
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
++I+ + ++ + + E LP S + +++V G P +++A+ +I L ++ R
Sbjct: 159 KHIQDVSGVRM-VAQKEMLPQ---STERVVEVQGTPEGIQRAVWEICKCLVDDWQRGTGT 214
Query: 224 LLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGI 283
+L + + + G PL G NY R S+R V GN GG
Sbjct: 215 VLYNP--VVRGGG----QPLGGDR-NYPQERSYGSSR------VTRTGNGADFSSNSGGR 261
Query: 284 IKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESG 343
R +S AA R P T E+G
Sbjct: 262 PYNRRSDS---------------------------------DAASRGPP-----THDENG 283
Query: 344 DPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG 403
+ + T I +P+ +GC+IGR G ISE+R A+ A I I + E M I G
Sbjct: 284 EELQTQNISIPADMVGCIIGRQGTKISEIRKASGARISIAKGPH----DESGERMFTIMG 339
Query: 404 SLDVASSALSQVTLRLRANTFER 426
S +AL + L A R
Sbjct: 340 SAKANETALYLLYENLEAEKTRR 362
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 36/164 (21%)
Query: 132 DDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
D+E+ + TL T+R +V + + G +IGKGGQ + N+R ET + + K + D
Sbjct: 42 DEEYAQTTL-TLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSK-----VVQGVHDR 95
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+L + G V KA +A L E AP VG G S
Sbjct: 96 VLTITGGCDAVSKAYAVVARSLLE------------------------GAPSVGMGGVIS 131
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
A ++L+ +G VIG+ G IK I+ SG +
Sbjct: 132 AN------GTHPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRM 169
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 55/291 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGTNLF 103
R L GS+IGKGG V ++++ + I++S E PG +RI+ + S
Sbjct: 49 RLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSIN----- 103
Query: 104 EDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVI 163
E ++ A L ++ AED+ DE VR+++P G +IGKGG I
Sbjct: 104 ----EILTAANLILQKLLSE--AEDNNDVDEKTS----QVRLVLPNSVCGGIIGKGGATI 153
Query: 164 QNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
++ ++A I++ +D+ LP + D L+ + G +A+ I S+L E+P+ +Q+
Sbjct: 154 KSFVEHSQASIKLSSQDQILPGVS---DRLVTITGTLEQQLRAIFLIVSKLAEDPNYAQY 210
Query: 223 L---LLSSSSNIYQSSGVYLSAPLVGSYG--NY-------SARRDE-------------- 256
L + ++ G+ VG YG NY +AR ++
Sbjct: 211 ANAPLSYTGGSVAGIQGIPGGYTPVG-YGLPNYGSSVYGVNARNNKGLMAPLVAMRSPLP 269
Query: 257 ------ASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
AS S+++ P +G ++G+ G I I+Q SGA IK+ G
Sbjct: 270 IGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRG 320
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFIS 312
++ S LRL+ G VIGKGG + + +SGA I++ + G I +
Sbjct: 39 EDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILV 98
Query: 313 TKEFFEDPSPTITAA-LRLQPRCSEKTERESGDPVIT-TRILVPSAQIGCLIGRGGAIIS 370
T E +TAA L LQ SE + D + R+++P++ G +IG+GGA I
Sbjct: 99 TGSINE----ILTAANLILQKLLSEAEDNNDVDEKTSQVRLVLPNSVCGGIIGKGGATIK 154
Query: 371 EMRSATRASIRILTNENV-PKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGA 429
++ASI++ + + + P V+ + +V ITG+L+ +LRA F
Sbjct: 155 SFVEHSQASIKLSSQDQILPGVS---DRLVTITGTLE----------QQLRA-IFLIVSK 200
Query: 430 LAAHPPVLPYVPMSLDITDGSKYG 453
LA P Y L T GS G
Sbjct: 201 LAEDPNYAQYANAPLSYTGGSVAG 224
>gi|17550876|ref|NP_510825.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
gi|351059040|emb|CCD66899.1| Protein C36E6.1, isoform b [Caenorhabditis elegans]
Length = 641
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 148/348 (42%), Gaps = 54/348 (15%)
Query: 51 PLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFV 110
P + +G +IG+ G V+ + ++ ++++ R+V IY E E + ++
Sbjct: 62 PEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSSTGFRLVEIYGIPEN---IERAKAYI 118
Query: 111 S---------PAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S P VH + S D+ G+ + IT+ + +PA++ G +IGKGG+
Sbjct: 119 SEVVTRGTRQPGPLCQPVVHVQTHGIKSPVVDQ-GDPSKITIEIPIPANKCGAIIGKGGE 177
Query: 162 VIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQ 221
++ +R+ T +++L+D ++ + L++ G+P V + + +A
Sbjct: 178 QMRKLRSWTNCNVQLLQDNNI----ADTVKPLKITGDPKQVEQCRLLVAD---------- 223
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
+L+ + + S+ + + P+ SL++ P +G ++G G
Sbjct: 224 --ILACNDDTPASAMMAGNGPVA----------------TMSLQVKVPRCTVGAIMGLQG 265
Query: 282 GIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTE 339
IK++ E+G I+ D + + I K + +L E
Sbjct: 266 KNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKN-------KVYVCAQLIKAIVEANS 318
Query: 340 RESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNEN 387
+ PV+ +++P+++ G +IGRGG I ++ + A + + N
Sbjct: 319 EAANAPVVLFYMVIPASKCGLVIGRGGETIKQINQESGAHCELSRDPN 366
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 269 PAGNIGGVIGKGGGIIKQIRQESGASIKVD-SSGAEGDDCIIFISTKEFFE--------- 318
P +G VIG+ G ++ I Q+SG ++V + G + E E
Sbjct: 62 PEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSSTGFRLVEIYGIPENIERAKAYISEV 121
Query: 319 ------DPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISE 371
P P + +Q + + GDP IT I +P+ + G +IG+GG + +
Sbjct: 122 VTRGTRQPGPLCQPVVHVQTHGIKSPVVDQGDPSKITIEIPIPANKCGAIIGKGGEQMRK 181
Query: 372 MRSATRASIRILTNENV 388
+RS T ++++L + N+
Sbjct: 182 LRSWTNCNVQLLQDNNI 198
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 110/262 (41%), Gaps = 36/262 (13%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++ V + VP +G VIG+ G +Q I ++ ++ QV +P
Sbjct: 54 IVKVAVPVPEQCVGLVIGRNGAEVQAISQKSGCRV-------------------QVTVQP 94
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVG--SYGNYSARRDEA 257
+ LV+I + EN R++ + + + G L P+V ++G S D+
Sbjct: 95 SSTGFRLVEIYG-IPENIERAKAYISEVVTRGTRQPGP-LCQPVVHVQTHGIKSPVVDQG 152
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFF 317
+ ++ + PA G +IGKGG ++++R + ++++ D + +
Sbjct: 153 DPSKITIEIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADT----VKPLKIT 208
Query: 318 EDPSPTITAALRLQP--RCSEKTERES----GDPVITT--RILVPSAQIGCLIGRGGAII 369
DP L + C++ T + PV T ++ VP +G ++G G I
Sbjct: 209 GDPKQVEQCRLLVADILACNDDTPASAMMAGNGPVATMSLQVKVPRCTVGAIMGLQGKNI 268
Query: 370 SEMRSATRASIRILTNENVPKV 391
++ T I+ L +++ PK+
Sbjct: 269 KKLSDETGTKIQFLPDDD-PKL 289
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 20 ATNGGSKRRNPGDETEQRGIGSEDTVY-RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
A NG +KR G G + T + + L P G+IIGKGG+ + QL+ +T + ++
Sbjct: 27 AENGATKR-------SHYGSGGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVK 79
Query: 79 ISET---VPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEF 135
IS++ PG ER+ I S E D F+ D + D + + D E
Sbjct: 80 ISKSHDFYPGTTERVCLITGSLEAIMAVMD---FI---MDKIREKPDLTL--KTTVDSES 131
Query: 136 GELTL---ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSF 189
G+ T V++LVP G +IGK G I+ I+ E+ + ++I KD L
Sbjct: 132 GKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQ------ 185
Query: 190 DELLQVAGEPAVVRKALVQIASRLHENP 217
+ + V GE R AL+ I +++ ++P
Sbjct: 186 ERCITVIGEKENNRNALMMILAKVADDP 213
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++LVP G +IGKGG I ++ +T A+++I K + + + + G +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDF--YPGTTERVCLITGSLEAI 104
Query: 203 RKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREF 262
+ I ++ E P + + S S G +A RD+
Sbjct: 105 MAVMDFIMDKIREKPDLTLKTTVDSES------------------GKTTAERDK------ 140
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE---GDDCIIFISTKE 315
++++ P G +IGK G IKQI++ESG+ +++ + + CI I KE
Sbjct: 141 QVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCITVIGEKE 196
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 24/138 (17%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------F 310
+ L+++ P G +IGKGG I Q+++++GA +K+ S G C+I
Sbjct: 45 YHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 104
Query: 311 ISTKEFFEDPSPTITAALRLQPRCSEKT--ERESGDPVI----TTRILVPSAQIGCLIGR 364
++ +F D +R +P + KT + ESG +ILVP++ G +IG+
Sbjct: 105 MAVMDFIMD-------KIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGK 157
Query: 365 GGAIISEMRSATRASIRI 382
G I +++ + + ++I
Sbjct: 158 AGNYIKQIKEESGSYVQI 175
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG +
Sbjct: 188 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCS 247
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 248 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 290
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 291 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVREA--- 343
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 344 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEV 400
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 401 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 455
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 456 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 514
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 515 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 547
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E V + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 397 EQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 456
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 457 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 500
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 501 KTVNELQNLTAAEVVVPRDQ 520
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 59 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 118
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 119 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 161
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 162 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVREA--- 214
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 215 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 271
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 272 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 326
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 327 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 385
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 386 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 418
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 268 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 327
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 328 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 371
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 372 KTVNELQNLTAAEVVVPRDQ 391
>gi|268576715|ref|XP_002643337.1| Hypothetical protein CBG15931 [Caenorhabditis briggsae]
Length = 840
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 142/331 (42%), Gaps = 51/331 (15%)
Query: 49 LCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGE 108
LC +G +IGKGG V + +T +++S R V I+ E + + E
Sbjct: 170 LC----VGLVIGKGGAEVHAINEKTGCRLQVSTEPSPIGYRNVEIHGLPEN---IDAARE 222
Query: 109 FVSPAQDALFRVHDRIVAEDSLADDEFGE-LTLITVRMLVPADQIGCVIGKGGQVIQNIR 167
+S L R+H A S A + GE + +TV + +PA + G VIG+GG +Q +R
Sbjct: 223 CIS---QVLNRIHHSPPAPHSGAQRQEGETVKTVTVEIPIPAHKCGAVIGRGGDTMQKLR 279
Query: 168 TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--PSRSQHLLL 225
+ + QI+++++ +P + + L++ G+ V A +A L +N P +H
Sbjct: 280 SWSNCQIQLIQENSMP----TTTKPLRITGDQQSVEYAQRLVAEVLAKNEGPPPPKH--- 332
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIK 285
AP SA E SL + P ++G ++G G IK
Sbjct: 333 --------------EAP--------SAPPQETYYENKSLHVKVPRSSVGAIMGPQGMNIK 370
Query: 286 QIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP 345
++ ++ SI V +D + P AA ++ + T S D
Sbjct: 371 RLSDQTCTSIHV----LPEEDPKVMERLITIVGSPDKVYLAADVIR---TIITSCNSPDY 423
Query: 346 VITT--RILVPSAQIGCLIGRGGAIISEMRS 374
+ + VP+A+ G +IG+GG +I ++ +
Sbjct: 424 YVHNVYYMDVPAAKCGLVIGKGGDVIKQINA 454
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 39/207 (18%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE------ 303
YS R D ++ P +G VIGKGG + I +++G ++V + +
Sbjct: 150 YSRRMDNEKGF-VTVNFPIPELCVGLVIGKGGAEVHAINEKTGCRLQVSTEPSPIGYRNV 208
Query: 304 -----------GDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV--ITTR 350
+CI + + P+P A +R+ G+ V +T
Sbjct: 209 EIHGLPENIDAARECISQVLNRIHHSPPAPHSGA------------QRQEGETVKTVTVE 256
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITG---SLDV 407
I +P+ + G +IGRGG + ++RS + I+++ ++P + ++ITG S++
Sbjct: 257 IPIPAHKCGAVIGRGGDTMQKLRSWSNCQIQLIQENSMPTTT----KPLRITGDQQSVEY 312
Query: 408 ASSALSQVTLRLRANTFEREGALAAHP 434
A +++V + + A +A P
Sbjct: 313 AQRLVAEVLAKNEGPPPPKHEAPSAPP 339
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 73/178 (41%), Gaps = 21/178 (11%)
Query: 4 QSNINYGKRTHFQSDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGG 63
Q ++ Y +R + A G ++ + E+ P +G+I+G G
Sbjct: 307 QQSVEYAQRLVAEVLAKNEGPPPPKHEAPSAPPQETYYENKSLHVKVPRSSVGAIMGPQG 366
Query: 64 EIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFRVH 121
+K+L +T ++I + E P ER++TI S + L D ++ + VH
Sbjct: 367 MNIKRLSDQTCTSIHVLPEEDPKVMERLITIVGSPDKVYLAADVIRTIITSCNSPDYYVH 426
Query: 122 DRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
+ M VPA + G VIGKGG VI+ I ++ A+ + ++
Sbjct: 427 N-------------------VYYMDVPAAKCGLVIGKGGDVIKQINADSGARCELARE 465
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 32 DETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET---VPGCDE 88
++ +R G+ ++ L P G+IIGKGGE + L+ E + +++S++ PG E
Sbjct: 26 EQLRRRASGNGTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTE 85
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTL-------- 140
R+ I S EG + R+H+ I+ + D ++ +
Sbjct: 86 RVCLITGSVEG-----------------VLRIHEFIMEKIKEKPDPTAKIAIDFDHKQPA 128
Query: 141 ---ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI---LKDEHLPLCALSFDELLQ 194
V++LVP G +IGKGG I+ I+ E+ A ++I KD L + +
Sbjct: 129 EREKQVKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHAL------AERCIT 182
Query: 195 VAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
V GE +KA I +++ E+P L +S
Sbjct: 183 VIGEMDNNKKACQLILAKIVEDPQSGSCLHVS 214
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDC 307
RR + F +++ PA G +IGKGG I +++E+GA +K+ S G C
Sbjct: 29 RRRASGNGTFHFKILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVC 88
Query: 308 II------FISTKEFF-----EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSA 356
+I + EF E P PT A+ + + ERE +ILVP++
Sbjct: 89 LITGSVEGVLRIHEFIMEKIKEKPDPTAKIAIDFDHK--QPAEREK-----QVKILVPNS 141
Query: 357 QIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
G +IG+GG+ I +++ + A ++I +A E + + G +D
Sbjct: 142 TAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALA---ERCITVIGEMD 188
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 160/405 (39%), Gaps = 86/405 (21%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L + ++IGKGGE V Q+R +++ +SE G ERI+T+ S G + +
Sbjct: 106 RALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTV---SGGVDAVAKA 162
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNI 166
F + R + + L+ +R+L+P IG +IGKGG I+ I
Sbjct: 163 -----------FGLIIRTINSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREI 211
Query: 167 RTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN-------PSR 219
+ + A++ D LP LS + L V G V A +A+ L E P+
Sbjct: 212 QDASGARLN-ASDSCLP---LSTERSLMVVGVADAVHIATYYVATTLVEQLTERFGGPAA 267
Query: 220 SQHLLLSSSSNIYQSSGV----YLSAPLVGSYG---NYSARRDEASAREFSLRLVCPAGN 272
S + S G+ Y P G+YG NY RR A+ PA
Sbjct: 268 SAYASRSGGPAGAVPGGMQVVPYTPQPAFGNYGHPDNY--RRHNNQAQR------TPANP 319
Query: 273 IGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS--PTITAALRL 330
G G + Q+ A I + DPS P + A
Sbjct: 320 YGIPYLHGQPPV----QQPAAPI--------------------HYADPSAQPAYSGAGPH 355
Query: 331 QPRCSEKTERE--------------SGDPVITTRILVPSAQIGCLIGRGGAIISEMRSAT 376
QP G P +T +I +P+ +G +IG+GGA I+E+R +
Sbjct: 356 QPTVPHHGAHTGPAAQGHGNMAAMIPGAP-LTQQIYIPNDMVGAIIGKGGAKINEIRQLS 414
Query: 377 RASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
+ I+I N P+ +E +V ITG+ + AL + RL +
Sbjct: 415 GSVIKI----NEPQ-DNSNERLVTITGTQECNQMALYMLYSRLES 454
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 71/175 (40%), Gaps = 18/175 (10%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS------TKEFF 317
+R + + VIGKGG + QIR+ S A V + I+ +S K F
Sbjct: 105 VRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVSGGVDAVAKAFG 164
Query: 318 EDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATR 377
I + +P S T+ P+ R+L+P IG +IG+GG I E++ A+
Sbjct: 165 -----LIIRTINSEPLSSASTQNSKTFPL---RLLIPHILIGSIIGKGGMRIREIQDASG 216
Query: 378 ASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGALAA 432
A + N + + E + + G D A V L ER G AA
Sbjct: 217 ARL----NASDSCLPLSTERSLMVVGVADAVHIATYYVATTLVEQLTERFGGPAA 267
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ + ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 207
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K + ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 207
>gi|118482617|gb|ABK93228.1| unknown [Populus trichocarpa]
Length = 159
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 17/126 (13%)
Query: 174 IRILKDEHLPLCALSF--DELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNI 231
I +L LPLCA ++ D ++Q++G+ VV KAL +I +L ENP + Q + +S S N
Sbjct: 2 ITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLRENPPK-QVISISPSYN- 59
Query: 232 YQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
Y + P + Y+ +A+A ++ ++ P +GG+IG+ G I +IR ES
Sbjct: 60 ------YSAVP----FQQYA---PQAAADYVTMEMMVPETMMGGLIGRSGSNISRIRVES 106
Query: 292 GASIKV 297
GA IKV
Sbjct: 107 GAVIKV 112
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ + ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCSEKTER--------------ESGDPVI 347
FI+ K E ++ + T ++ LQP+ + +R DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 207
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTVEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K + ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 207
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 81 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 140
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 141 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 183
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 184 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVREA--- 236
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 237 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 293
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 294 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 348
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 349 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 407
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 408 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 440
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 290 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 349
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 350 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 393
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 394 KTVNELQNLTAAEVVVPRDQ 413
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 53 RKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSP 112
+++GSIIGK G+ +K+ R ++ + I IS+ C ERIVT+ ++E +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVTGTTECIH----------- 67
Query: 113 AQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRA 172
A + + E+ L + +T+R++VPA Q G +IGKGG I+ IR T A
Sbjct: 68 --KAFTMICKKF--EEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGA 123
Query: 173 QIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I++ E LP S + + V+G + + I S + E+P +
Sbjct: 124 SIQV-ASEMLP---NSTERAVTVSGTADAITLCIQNICSIMLESPPK 166
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAE-------GDD 306
D ++R++ +G +IGK G IK+ R++SGA I + D S E +
Sbjct: 5 DSVPVSLLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTE 64
Query: 307 CI---IFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIG 363
CI + K+F ED T T P +T R++VP++Q G LIG
Sbjct: 65 CIHKAFTMICKKFEEDLQNTPTVP----------------KPPVTLRLVVPASQCGSLIG 108
Query: 364 RGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQV 415
+GG+ I E+R T ASI++ +E +P E V ++G+ D + + +
Sbjct: 109 KGGSKIKEIRETTGASIQV-ASEMLPN---STERAVTVSGTADAITLCIQNI 156
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 41/162 (25%)
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAG 197
++L+TVRM++ ++G +IGK G I+ R ++ A+I I D P + ++ V G
Sbjct: 9 VSLLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINI-SDGSCP------ERIVTVTG 61
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEA 257
+ KA I + E+ Q++ P+
Sbjct: 62 TTECIHKAFTMICKKFEED---------------LQNTPTVPKPPV-------------- 92
Query: 258 SAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
+LRLV PA G +IGKGG IK+IR+ +GASI+V S
Sbjct: 93 -----TLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVAS 129
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 61/269 (22%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRI-SETVPGCDERIVTIYSSSEGTNLFE 104
R + P + GS+IGKGG +K++R T ++I++ SE +P ER VT+ +++ L
Sbjct: 94 LRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEMLPNSTERAVTVSGTADAITLCI 153
Query: 105 D---SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S SP + A + + V VP VI GGQ
Sbjct: 154 QNICSIMLESPPKGATIQYRPKPV---------------------VPP-----VIFAGGQ 187
Query: 162 V------IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHE 215
+Q ++ + ++ I K E L LS G+P +
Sbjct: 188 AYTVPGQMQGVQASEKERLGIPKMELSKLHQLSL-------GQPIPII------------ 228
Query: 216 NPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGG 275
P S L+ ++ + + Y A + + + + E ++ P IG
Sbjct: 229 -PCTSPQLIQATMPGLPHMAAAYPRATNTVPQALPAQPQQQQTTTEMAI----PNDLIGC 283
Query: 276 VIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+IG+GG I +IRQ SGA IK+ S+ EG
Sbjct: 284 IIGRGGQKINEIRQMSGAMIKI-SNAEEG 311
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
M +P D IGC+IG+GGQ I IR + A I+I E + D + + G P +
Sbjct: 274 MAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE-----GAPDRKVTITGTPETIGL 328
Query: 205 A--LVQIASRLHEN 216
A L+ + LH+
Sbjct: 329 AQYLINTSMELHKT 342
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 18/189 (9%)
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDC-IIFISTKEFFE-DP 320
RLV PA +GG+IG+ G IK++ E+ A ++V D+ +G I+ +S +E E +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 321 SPTITAALRLQPRCSEKTERESGDPVI-------TTRILVPSAQIGCLIGRGGAIISEMR 373
SP + AA+++ +E + S ++ + R+LVP AQ +IG+ G I ++
Sbjct: 160 SPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQ 219
Query: 374 SATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA--------NTFE 425
+T +++RI+ + + E +V+I G+ +AL V LR + FE
Sbjct: 220 ESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLFE 279
Query: 426 REGALAAHP 434
R+ A P
Sbjct: 280 RKNPEVAQP 288
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 16 QSDAATNGGSKRRNPGDETEQRGIGSE-DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETK 74
Q T + ++ G++ R G +V+R + P K+G IIG+ G+ +K+L ET+
Sbjct: 69 QPAPVTAVEATKKGEGEDARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETR 128
Query: 75 SNIRISETV--PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLAD 132
+ +R+ + G RIV + + E+ +SPA +A ++ I + +
Sbjct: 129 ARVRVLDAPHGDGAFSRIVLVSAR-------EEVEAELSPAMNAAIKIFKHINEIEDINS 181
Query: 133 DEFGELT-----LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCAL 187
D G L + +VR+LVP Q VIGK G I++I+ T + +RI+ ++ L
Sbjct: 182 D--GTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHET 239
Query: 188 SFDELLQVAGEPAVVRKALVQIASRL--------------HENPSRSQHLLLSSSSNIYQ 233
+ ++++ G V AL + L +NP +Q S N
Sbjct: 240 MGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHLFERKNPEVAQP--QQSRGNPKG 297
Query: 234 SSGVYLSAP-LVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESG 292
S +Y P Y ++ ++ + + + P ++G +IG G ++ IR SG
Sbjct: 298 SRFLYGHDPSFHAPYSRDLSQPADSLITKITRTMQIPLADVGEIIGVRGENVELIRSVSG 357
Query: 293 ASIKVDSSG 301
A + ++ G
Sbjct: 358 AVVVLEKIG 366
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,268,140,937
Number of Sequences: 23463169
Number of extensions: 368864606
Number of successful extensions: 1046466
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 1818
Number of HSP's that attempted gapping in prelim test: 1007080
Number of HSP's gapped (non-prelim): 28355
length of query: 512
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 365
effective length of database: 8,910,109,524
effective search space: 3252189976260
effective search space used: 3252189976260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)