BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010374
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 271/563 (48%), Gaps = 109/563 (19%)
Query: 11 KRTHFQ-SDAATNGGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
KR Q +++ +N KRR D+ + E VYR LCP+ +G +IGK G+++ +
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDKINR----DELVVYRILCPIDVVGGVIGKSGKVINAI 61
Query: 70 RSETKSNIRISETVPGCDERIVTIYSS----SEGTNLFEDSGEFVSPAQDALFRVHDRIV 125
R TK+ I++ + + GC +R++TIY S E + E + AQDAL +V+D IV
Sbjct: 62 RHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIV 121
Query: 126 AEDSLADDEFGELTLI------TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL-K 178
A +D+E T + R+LVP Q +IGK G+ I+ IR TRA ++++ K
Sbjct: 122 A----SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSK 177
Query: 179 DEHLP--LCALSFDELLQVAGEPAVVRKALVQIASRLHE-NP-------SRSQHLLLSS- 227
D P +CA+ +D ++ ++GEP V++AL +++ +++ NP S SQ + +S
Sbjct: 178 DVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASV 237
Query: 228 ------SSNIYQSSGVYLSAPL-------VGSYGNYSARRD------------------- 255
S+++Y +G Y + V SY N + D
Sbjct: 238 IVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSL 297
Query: 256 --------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDD 306
+ + E +++CP NI VIGKGG IK+IR+ SG+ I+V DS GDD
Sbjct: 298 PVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDD 357
Query: 307 -CIIFISTKEFFED-PSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGR 364
C+I ++ E +D S + A L LQ E E + V ++LV S IGC+IG+
Sbjct: 358 ECVIIVTATESPDDMKSMAVEAVLLLQ----EYINDEDAENV-KMQLLVSSKVIGCVIGK 412
Query: 365 GGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTF 424
G++I+E+R T A+I I + +++V+++G + AL Q+ LRLR +
Sbjct: 413 SGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVL 464
Query: 425 EREGALAAHPPVLPYVPMSLDITDGSKYGNRDNQSRGRGNSYATGNLPG-----RDSYGS 479
+ ++A P DN S G+S A LP + G
Sbjct: 465 GDKDSVATRKP----------------PARTDNCSFLSGSSNAGYTLPSFMSSMASTSGF 508
Query: 480 YG-GSLSGGGNAYGAYGDHSSGR 501
+G GS G N G+ G +S GR
Sbjct: 509 HGYGSFPAGDNVLGSTGPYSYGR 531
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 58/304 (19%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGC-DERIVTIYSSSEG 99
SE+ V++ LCPL I +IGKGG +K++R + S I ++++ C D+ V I +++E
Sbjct: 309 SEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATES 368
Query: 100 TNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKG 159
+ + S A +A+ + + I ED+ + +++LV + IGCVIGK
Sbjct: 369 PD------DMKSMAVEAVLLLQEYINDEDA---------ENVKMQLLVSSKVIGCVIGKS 413
Query: 160 GQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN--- 216
G VI IR T A I I K + D+L++V+GE + VR AL+QI RL E+
Sbjct: 414 GSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 217 ----------PSRSQHL-LLSSSSN-----------IYQSSGV--YLSAP----LVGSYG 248
P+R+ + LS SSN + +SG Y S P ++GS G
Sbjct: 466 DKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMASTSGFHGYGSFPAGDNVLGSTG 525
Query: 249 NYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCI 308
YS R +S+ +L ++ PA + V+GKGGG ++ IR+ SGA I++ +S D I
Sbjct: 526 PYSYGRLPSSS---ALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISASKTSHGDHI 582
Query: 309 IFIS 312
+S
Sbjct: 583 ALLS 586
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 185/394 (46%), Gaps = 52/394 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRL 266
++I +L E ++ +L+ +++ SG + S +G + + + + L
Sbjct: 339 IEIMKKLREA---FENDMLAVNTH----SGYFSSLYPHHQFGPFP--HHHSYPEQEIVNL 389
Query: 267 VCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPT 323
P +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 390 FIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPDVSERMVIITG-----PPEAQ 442
Query: 324 ITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
A R+ + E+ + V + I VPS+ G +IG+GG ++E+++ T A + I
Sbjct: 443 FKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-I 501
Query: 383 LTNENVPKVAYEDEE-MVQITGSLDVASSALSQV 415
+ + P E+EE +V+I G + +A ++
Sbjct: 502 VPRDQTPD---ENEEVIVRIIGHFFASQTAQRKI 532
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 194/432 (44%), Gaps = 58/432 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQASPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 TGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGSVETCA 337
Query: 204 KALVQIASRL---HENPSRSQ----HLL---------LSSSSNIYQSSGVYLSAPLVGSY 247
KA +I ++ +EN S HL+ L ++ + L Y
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY 397
Query: 248 GNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC 307
+ E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 398 PQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKV 451
Query: 308 IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGG 366
+ I T P A R+ + E+ + V + I VPS G +IG+GG
Sbjct: 452 RMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 507
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRANT 423
++E++S + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 508 KTVNELQSLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH- 563
Query: 424 FEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 -QQQKALQSGPP 574
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 130/284 (45%), Gaps = 45/284 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 ----------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAR 260
+L S++ + G Y LS V + S +
Sbjct: 181 PYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLDPSTQ 240
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 241 TSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 41/282 (14%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
F++ + + A A+ +T+R+++PA Q G +IGK G I+
Sbjct: 76 VSMIA-------FKLDEDLCAAP--ANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL-- 223
IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 127 IRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPY 182
Query: 224 --------LLSSSSNIYQSSGVY-------------LSAPLVGSYGNYSARRDEASAREF 262
+L S++ + G Y LS V + S +
Sbjct: 183 HPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTS 242
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
S + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 243 SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEGPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGSVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTERES-GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ S P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 253 RRDEASARE------FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
RR E+ E ++RL+ +G +IGK G +K++R+ESGA I +
Sbjct: 31 RRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERI 90
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGG 366
I T F+ + I S + P +T R++VP++Q G LIG+GG
Sbjct: 91 VTITGPTDAIFKAFA-MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ I E+R +T A +++ + + E V I+G+ D + Q+ + +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVM 198
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 72/235 (30%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + +
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H + +
Sbjct: 192 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 251
Query: 128 DSL----------------------ADDEFGELTLI-------TVRMLVPADQIGCVIGK 158
A + G+ + + T + +P D IGC+IG+
Sbjct: 252 TPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGR 311
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G I IR + AQI+I S + + + G PA + A I +RL
Sbjct: 312 QGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
++ P T + +P+ IGC+IGR G I+E+R + A I+I A E Q
Sbjct: 288 DASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------ATEGSSERQ 340
Query: 401 ITGSLDVASSALSQVTLRLR 420
IT + A+ +L+Q + R
Sbjct: 341 ITITGTPANISLAQYLINAR 360
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+T R+L+ ++G +IG+ G + +MR + A I I + N P E +V ITG D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 98
Query: 407 VASSALSQVTLRLRANTFE--REGALAAHPPV 436
A + + + + + PPV
Sbjct: 99 AIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 29/179 (16%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERIVTI +
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT--------- 97
Query: 107 GEFVSPAQDALFRVHDRIVAE------DSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
DA+F+ I + +S+++ +T+R++VPA Q G +IGKGG
Sbjct: 98 --------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGG 149
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
I+ IR T AQ+++ D + S + + ++G P + + + QI + E+P +
Sbjct: 150 SKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + C + ++ + G
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITGPTD 98
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA IA + E+ ++ S N A S
Sbjct: 99 AIFKAFAMIAYKFEED--------------------------IINSMSNSPA----TSKP 128
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 129 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 165
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + I T F+ +
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 105
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I S + P +T R++VP++Q G LIG+GG+ I E+R +T A ++
Sbjct: 106 -MIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQ 164
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRL 419
+ + +P E V I+G+ D + Q+ + +
Sbjct: 165 V-AGDMLPN---STERAVTISGTPDAIIQCVKQICVVM 198
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 87/235 (37%), Gaps = 72/235 (30%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSE------ 98
R + P + GS+IGKGG +K++R T + ++++ + +P ER VTI + +
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 99 -------------------------------GTNLFEDSGEFVSPAQDALFRVHDRIVAE 127
G + G++ P D L ++H + +
Sbjct: 192 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 251
Query: 128 DSL----------------------ADDEFGELTLI-------TVRMLVPADQIGCVIGK 158
A + G+ + + T + +P D IGC+IG+
Sbjct: 252 TPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGR 311
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
G I IR + AQI+I S + + + G PA + A I +RL
Sbjct: 312 QGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 361
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 341 ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQ 400
++ P T + +P+ IGC+IGR G I+E+R + A I+I A E Q
Sbjct: 288 DASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-------ATEGSSERQ 340
Query: 401 ITGSLDVASSALSQVTLRLR 420
IT + A+ +L+Q + R
Sbjct: 341 ITITGTPANISLAQYLINAR 360
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 347 ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLD 406
+T R+L+ ++G +IG+ G + +MR + A I I + N P E +V ITG D
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGPTD 98
Query: 407 VASSALSQVTLRLR 420
A + + +
Sbjct: 99 AIFKAFAMIAYKFE 112
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 59/291 (20%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
R L +++GSIIGK GE VK++R ++ + I ISE C ERI TI S+ +F
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAA--VFHA 75
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--LITVRMLVPADQIGCVIGKGGQVI 163
F++ + + A A G ++ +T+R+++PA Q G +IGK G I
Sbjct: 76 VSMIA-------FKLDEDLCA----APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 164 QNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHL 223
+ IR T AQ+++ D L S + + V+G P + + QI + + E+P + +
Sbjct: 125 KEIRETTGAQVQVAGD----LLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATI 180
Query: 224 LLSSSSNIYQSSGVYLSA----PLVGSYGNYSARR------------------------- 254
S ++ V LSA + G YG +
Sbjct: 181 PYHPSLSL---GTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLDP 237
Query: 255 -DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG 304
+ S++EF + P IG VIG+ G I +IRQ SGA IK+ + AEG
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQ-AEG 283
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 38/166 (22%)
Query: 133 DEFGELTL-ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE 191
+E EL++ +T+RML+ ++G +IGK G+ ++ IR ++ A+I I + C +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGS----CP---ER 61
Query: 192 LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYS 251
+ + G A V A+ IA +L E+ L ++ +N G +S P V
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN-----GGNVSRPPV------- 102
Query: 252 ARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGK G IK+IR+ +GA ++V
Sbjct: 103 -----------TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
+LR++ +G +IGK G +K+IR++S A I + I ST F S
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS 77
Query: 322 PTITAALRL-QPRCSEKTER-ESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A +L + C+ P +T R+++P++Q G LIG+ G I E+R T A
Sbjct: 78 ---MIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ 134
Query: 380 IRI 382
+++
Sbjct: 135 VQV 137
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
LVP+ IGC+IGR G+ ISE+R + A I+I
Sbjct: 246 FLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSS 96
G++ + +L P IG +IG+ G + ++R + ++I+I G ER VTI S
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGS 294
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 183 PGGTSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 239
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ I +++L
Sbjct: 240 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------IPLKILAH 282
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 283 NGLVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVKGTVEACASAE 338
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 339 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLSPPAGPRGAPPAAP 395
Query: 242 --PLVGSYGNYSARRDEASAREFS----------LRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ F + L P +G +IGK G IKQ+ +
Sbjct: 396 YHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLAR 455
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 456 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 508
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 509 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 564
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 565 FFASQTAQRKI 575
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 240 SAPLVGSYGNYSARRD--------EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQES 291
S P G++S+R +A +F LR++ P +G +IGK G IK I +++
Sbjct: 164 SPPQRAQRGDHSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQT 223
Query: 292 GASIKV---DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT 348
+ + + ++SGA I + E S L + + +++T+ P+
Sbjct: 224 QSRVDIHRKENSGAAEKPVTIHATP----EGTSEACRMILEIMQKEADETKLAEEIPL-- 277
Query: 349 TRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVA 408
+IL + +G LIG+ G + ++ T I I + +++ Y E + + G+++
Sbjct: 278 -KILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLS--IYNPERTITVKGTVEAC 334
Query: 409 SSALSQVTLRLRANTFERE 427
+SA ++ +LR FE +
Sbjct: 335 ASAEIEIMKKLR-EAFEND 352
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETV 83
S++ +PG ++Q+ D R L P + +G+IIGK G ++ + +T+S I + +
Sbjct: 180 SRQGSPGSVSKQKPC---DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Query: 84 PGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G E+ +TI S+ EGT S A ++ + + D +F E I +
Sbjct: 237 AGAAEKSITILSTPEGT----------SAACKSILEIMHK-----EAQDIKFTEE--IPL 279
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
++L + +G +IGK G+ ++ I +T +I I + L L + + + V G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTL--YNPERTITVKGNVETCA 337
Query: 204 KALVQIASRL---HENPSRSQHL--------------LLSSSSNIYQSSGVYLSAPLVGS 246
KA +I ++ +EN S +L L +S + + SA +
Sbjct: 338 KAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSA-MTPP 396
Query: 247 YGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
Y + E ++ L PA ++G +IGK G IKQ+ + +GASIK+ + A
Sbjct: 397 YPQFEQSETE------TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAK 450
Query: 307 CIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRG 365
+ I T P A R+ + E+ + V + I VPS G +IG+G
Sbjct: 451 VRMVIITG----PPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKG 506
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL---DVASSALSQVTLRLRAN 422
G ++E+++ + A + ++ + P D+ +V+ITG VA + ++ +++ +
Sbjct: 507 GKTVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
Query: 423 TFEREGALAAHPP 435
+++ AL + PP
Sbjct: 564 --QQQKALQSGPP 574
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 199/455 (43%), Gaps = 72/455 (15%)
Query: 17 SDAATNGGSKRRNPGDETEQ-------RGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQL 69
+DA GG + NP Q R D R L P + +G+IIGK G ++ +
Sbjct: 161 ADAPAVGGRRGFNPRGPPRQGSPSLGARPKLQSDVPLRLLVPTQFVGAIIGKEGATIRNI 220
Query: 70 RSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAED 128
+T S I I + G E+ +T++S+ EG S A + + + +
Sbjct: 221 TKQTHSKIDIHRKENAGAAEKPITVHSTPEGC----------SSACRNIMEIMQKEAIDT 270
Query: 129 SLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCA 186
+ ++ I +++L + +G +IGK G+ ++ I +T +I I L+D L
Sbjct: 271 KITEE-------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTL 319
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRL---HENPSRSQHLLLSSSSNI-----YQSSGVY 238
+ + + V G KA +I ++ +EN + HL SN+ + G++
Sbjct: 320 YNPERTITVKGTLDACAKAEEEIMKKVRESYENDVAAMHL----QSNLIPGLNLNALGLF 375
Query: 239 ------------LSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQ 286
+S P G+ Y + + + ++ L PA +G +IGK G IKQ
Sbjct: 376 PGAASGGISPSVVSGPPPGAQAGYQSFGAQMESE--TVHLFIPALAVGAIIGKQGQHIKQ 433
Query: 287 IRQESGASIKV-DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDP 345
+ + +GASIK+ + G + ++ IS P A R+ + E+ +
Sbjct: 434 LSRFAGASIKIAPADGIDAKQRMVIISG-----PPEAQFKAQGRIFGKLKEENFFGPKEE 488
Query: 346 V-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
V + I VPS G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 489 VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGH 545
Query: 405 L---DVASSALSQVTLRLRANTFEREGALAAHPPV 436
+A + ++ ++R ++ AA PPV
Sbjct: 546 FYASQLAQRKIQEIISQVRRQ--QQPKPSAAGPPV 578
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 188/431 (43%), Gaps = 83/431 (19%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDE 88
PG ++ R I D R L P + +G+IIGK G +K + +T+S + I + G E
Sbjct: 176 PGSSSQARQI---DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAE 232
Query: 89 RIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVP 148
+ VTI+++ EGT S A + + + E LA++ + +++L
Sbjct: 233 KPVTIHATPEGT----------SEACRMILEIMQKEADETKLAEE-------VPLKILAH 275
Query: 149 ADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKAL 206
+G +IGK G+ ++ I ET +I I L+D L + + + V G A
Sbjct: 276 NGFVGRLIGKEGRNLKKIEHETGTKITISSLQD----LSIYNPERTITVRGTIEACANAE 331
Query: 207 VQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSA------------------------- 241
++I +L E + L ++ +N+ G+ LSA
Sbjct: 332 IEIMKKLREA-FENDMLAVNQQANLI--PGLNLSALGIFSTGLSVLPPPAGPRGVPPSPP 388
Query: 242 --PLVGSYGNYSA----------RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQ 289
P G +S+ + + ++ L P +G +IGK G IKQ+ +
Sbjct: 389 YHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLAR 448
Query: 290 ESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV 346
+GASIK+ + AEG D ++ I+ P A R+ + E+ + V
Sbjct: 449 FAGASIKI--APAEGPDVSERMVIITG-----PPEAQFKAQGRIFGKLKEENFFNPKEEV 501
Query: 347 -ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEE-MVQITGS 404
+ I VPS+ G +IG+GG ++E+++ T A + I+ + P E+EE +V+I G
Sbjct: 502 KLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD---ENEEVIVRIIGH 557
Query: 405 LDVASSALSQV 415
+ +A ++
Sbjct: 558 FFASQTAQRKI 568
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV---DSSGAEGDDCIIFIS 312
+A +F LR++ P +G +IGK G IK I +++ + + + ++SGA I +
Sbjct: 181 QARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHAT 240
Query: 313 TKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEM 372
E S L + + +++T+ P+ +IL + +G LIG+ G + ++
Sbjct: 241 P----EGTSEACRMILEIMQKEADETKLAEEVPL---KILAHNGFVGRLIGKEGRNLKKI 293
Query: 373 RSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
T I I + +++ Y E + + G+++ ++A ++ +LR FE +
Sbjct: 294 EHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLR-EAFEND 345
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 33/181 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E+P
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLESPP 171
Query: 219 R 219
+
Sbjct: 172 K 172
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
++LH+ + H ++ + + SG+ S+P V Y A D ASA+ S L P
Sbjct: 240 TKLHQLAMQQSHFPMTHGNTGF--SGIESSSPEVKGYW---AGLD-ASAQTTSHELTIPN 293
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIKV 297
IG +IG+ G I +IRQ SGA IK+
Sbjct: 294 DLIGCIIGRQGAKINEIRQMSGAQIKI 320
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS S
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAASISL 343
Query: 411 ALSQVTLRLRANT 423
A + +RL + T
Sbjct: 344 AQYLINVRLSSET 356
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
+ +P D IGC+IG+ G I IR + AQI+I
Sbjct: 289 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 320
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 11 KRTHFQSDAATNGGSKRRNPGDETEQRGIG----SEDTVYRYLCPLRKIGSIIGKGGEIV 66
+++HF G S + E + G ++ T + P IG IIG+ G +
Sbjct: 248 QQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 307
Query: 67 KQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFE 104
++R + + I+I+ V G +R VTI S+ +L +
Sbjct: 308 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQ 345
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P+ IGC+IGR GA I+E+R + A I+I V V ITGS
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN-----PVEGSSGRQVTITGS--A 333
Query: 408 ASSALSQVTLRLR 420
AS +L+Q + R
Sbjct: 334 ASISLAQYLINAR 346
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S T + P IG IIG+ G + ++R + + I+I+ V G R VTI S+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 101 NLFE 104
+L +
Sbjct: 337 SLAQ 340
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
T T + +P + IGC+IG+ G I IR + AQI+I
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ++ + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 270 YWASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P+ IGC+IGR GA I+E+R + A I+I V V ITGS
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN-----PVEGSSGRQVTITGS--A 333
Query: 408 ASSALSQVTLRLR 420
AS +L+Q + R
Sbjct: 334 ASISLAQYLINAR 346
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S T + P IG IIG+ G + ++R + + I+I+ V G R VTI S+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 101 NLFE 104
+L +
Sbjct: 337 SLAQ 340
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
T T + +P + IGC+IG+ G I IR + AQI+I
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ++ + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 270 YWASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P+ IGC+IGR GA I+E+R + A I+I V V ITGS
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN-----PVEGSSGRQVTITGS--A 333
Query: 408 ASSALSQVTLRLR 420
AS +L+Q + R
Sbjct: 334 ASISLAQYLINAR 346
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S T + P IG IIG+ G + ++R + + I+I+ V G R VTI S+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 101 NLFE 104
+L +
Sbjct: 337 SLAQ 340
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
T T + +P + IGC+IG+ G I IR + AQI+I
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ++ + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 270 YWASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 93/182 (51%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D LP S + + +AG P V + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD-MLP---NSTERAITIAGVPQSVTECVKQICLVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 97/223 (43%), Gaps = 13/223 (5%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K+IR+ESGA I + S G + I
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCPERIITLTGPTNAIFKAF 72
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP+ Q G LIG+GG I E+R +T A ++
Sbjct: 73 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTL-RLRANTFEREGALAAHPPVLPYV 440
+ + +P E + I G + + Q+ L L + +G + +PY
Sbjct: 133 V-AGDMLPN---STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVM----TIPYQ 184
Query: 441 PMSLDITDGSKYGNRDNQSRGRGNSYATGNL--PGRDSYGSYG 481
PM + G +D S G +AT +L P D+Y G
Sbjct: 185 PMPAS-SPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 37/164 (22%)
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELL 193
E G +T+R+L+ ++G +IGK G+ ++ IR E+ A+I I + + P + ++
Sbjct: 7 ESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERII 59
Query: 194 QVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSAR 253
+ G + KA I +L E+ + S N +A
Sbjct: 60 TLTGPTNAIFKAFAMIIDKLEED--------------------------INSSMTNSTA- 92
Query: 254 RDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
AS +LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 93 ---ASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T + +P+ IGC+IGR GA I+E+R + A I+I V V ITGS
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN-----PVEGSSGRQVTITGS--A 333
Query: 408 ASSALSQVTLRLR 420
AS +L+Q + R
Sbjct: 334 ASISLAQYLINAR 346
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
S T + P IG IIG+ G + ++R + + I+I+ V G R VTI S+
Sbjct: 277 STQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASI 336
Query: 101 NLFE 104
+L +
Sbjct: 337 SLAQ 340
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI 176
T T + +P + IGC+IG+ G I IR + AQI+I
Sbjct: 278 TQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 32.3 bits (72), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 250 YSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
Y A D ++ + + L P IG +IG+ G I +IRQ SGA IK+
Sbjct: 270 YWASLDAST--QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 33/182 (18%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDS 106
R L +++GSIIGK GE VK++R E+ + I ISE C ERI+T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT--------- 65
Query: 107 GEFVSPAQDALFRVHDRIVAEDSLADDEFGELT--------LITVRMLVPADQIGCVIGK 158
+A+F+ I+ D L +D +T +T+R++VPA Q G +IGK
Sbjct: 66 --------NAIFKAFAMII--DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGK 115
Query: 159 GGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPS 218
GG I+ IR T AQ+++ D + S + + +AG P + + + QI + E S
Sbjct: 116 GGCKIKEIRESTGAQVQVAGD----MLPNSTERAITIAGIPQSIIECVKQICVVMLETLS 171
Query: 219 RS 220
+S
Sbjct: 172 QS 173
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 37/157 (23%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
+T+R+L+ ++G +IGK G+ ++ +R E+ A+I I + + P + ++ +AG
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERIITLAGPTN 66
Query: 201 VVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR 260
+ KA I +L E+ S S N +A AS
Sbjct: 67 AIFKAFAMIIDKLEEDISSSMT--------------------------NSTA----ASRP 96
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+LRLV PA G +IGKGG IK+IR+ +GA ++V
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPS 321
++RL+ +G +IGK G +K++R+ESGA I + + T F+ +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFA 73
Query: 322 PTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
I L S + P +T R++VP++Q G LIG+GG I E+R +T A ++
Sbjct: 74 -MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 132
Query: 382 I 382
+
Sbjct: 133 V 133
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFE 104
R + P + GS+IGKGG +K++R T + ++++ + +P ER +TI + ++ E
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQ--SIIE 157
Query: 105 DSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQ 164
+ +V ++L+ +T I R P VI GGQ
Sbjct: 158 CVKQIC-------------VVMLETLSQSPPKGVT-IPYR---PKPSSSPVIFAGGQD-- 198
Query: 165 NIRTETRAQIRILKDEHLPLCALSFD------ELLQVAGEPAVVRKALVQIASRLHENPS 218
R T + +C L+ D E + G+ A+ + L ++LH+
Sbjct: 199 --RYSTGSDSASFPHTTPSMC-LNPDLEGPPLEAYTIQGQYAIPQPDL----TKLHQLAM 251
Query: 219 RSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIG 278
+ H ++ + + SG+ S+P V Y +ASA+ S L P IG +IG
Sbjct: 252 QQSHFPMTHGNTGF--SGIESSSPEVKGYWGL-----DASAQTTSHELTIPNDLIGCIIG 304
Query: 279 KGGGIIKQIRQESGASIKV 297
+ G I +IRQ SGA IK+
Sbjct: 305 RQGAKINEIRQMSGAQIKI 323
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 351 ILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASS 410
+ +P+ IGC+IGR GA I+E+R + A I+I V + V ITGS S
Sbjct: 292 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN-----PVEGSTDRQVTITGSAASISL 346
Query: 411 ALSQVTLRLRANT 423
A + +RL + T
Sbjct: 347 AQYLINVRLSSET 359
Score = 33.5 bits (75), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 41 SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGT 100
++ T + P IG IIG+ G + ++R + + I+I+ V G +R VTI S+
Sbjct: 285 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASI 344
Query: 101 NLFE 104
+L +
Sbjct: 345 SLAQ 348
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 66/420 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSE----DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIR 78
G S++ +PG GI S+ D R L P + +G+IIGK G ++ + +T+S I
Sbjct: 179 GTSRQMSPGS-----GIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKID 233
Query: 79 IS-ETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGE 137
+ + G E+ ++I+S+ EG S A + + ++ + AD+
Sbjct: 234 VHRKENAGAAEKPISIHSTPEG----------CSAACRMILEIMNQEAKDTKTADE---- 279
Query: 138 LTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPL------------- 184
+ +++L + +G +IGK G+ ++ + +T +I I + L L
Sbjct: 280 ---VPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSI 336
Query: 185 --CALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH---LLLSSSSNIYQSSGVYL 239
C L+ E+++ E + + + H P + L SS+ + G +
Sbjct: 337 EACCLAEQEIMKKVRE--AYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSV 394
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
P G G AS +E ++ + PA +G +IGK G IKQ+ + +GASIK+
Sbjct: 395 PGPPYGPMG--------ASEQE-TVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAP 445
Query: 300 SGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQI 358
+ A + I T P A R+ + E+ + V + T I V +A
Sbjct: 446 AEAPDSKMRMVIVTG----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAA 501
Query: 359 GCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
G +IG+GG ++E+++ T A + ++ E P D+ +V+I G +S L+Q +R
Sbjct: 502 GRVIGKGGKTVNELQNLTAAEV-VVPREQTPD--EHDQVIVKIIGHF--YASQLAQRKIR 556
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 180/389 (46%), Gaps = 55/389 (14%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 263
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 264 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 310
Query: 166 IRTETRAQIRILKDEHLPL---------------CALSFDELLQVAGEPAVVRKALVQIA 210
I +T +I I + L L CA + +E+++ E A + +
Sbjct: 311 IEQDTDTKITISPLQDLTLYNPERTITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQ 370
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLV-GSYGNYSARRDEASAREFSLRLVCP 269
+ L + + L SS+ +S+P SY + + + + + L P
Sbjct: 371 AHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESET-----VHLFIP 425
Query: 270 AGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTITA 326
A +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P A
Sbjct: 426 ALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQFKA 478
Query: 327 ALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTN 385
R+ + E+ + V + I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 479 QGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPR 537
Query: 386 ENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P D+ +V+ITG +S L+Q
Sbjct: 538 DQTPD--ENDQVVVKITGHF--YASQLAQ 562
Score = 39.3 bits (90), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
+ +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 205 VPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 245
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 181/391 (46%), Gaps = 59/391 (15%)
Query: 47 RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTNLFED 105
R L P + +G+IIGK G ++ + +T+S I I + G E+ +TI+S+ EG +
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 264
Query: 106 SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQN 165
A ++ I+ +++ D +F E I +++L + +G +IGK G+ ++
Sbjct: 265 ----------AACKIIMEIMQKEA-QDTKFTEE--IPLKILAHNNFVGRLIGKEGRNLKK 311
Query: 166 IRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHEN------- 216
I +T +I I L+D L + + + V G KA +I ++ E+
Sbjct: 312 IEQDTDTKITISPLQD----LTLYNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAA 367
Query: 217 PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA---------REFSLRLV 267
+ HL+ + N + G++ S+ + +S ++ L
Sbjct: 368 MNLQAHLIPGLNLN---ALGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQQPESETVHLF 424
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDC---IIFISTKEFFEDPSPTI 324
PA +G +IGK G IKQ+ + +GASIK+ + AEG D ++ I+ P
Sbjct: 425 IPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMVIITG-----PPEAQF 477
Query: 325 TAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRIL 383
A R+ + E+ + V + T I VPS G +IG+GG ++E+++ T A + ++
Sbjct: 478 KAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VV 536
Query: 384 TNENVPKVAYEDEEMVQITGSLDVASSALSQ 414
+ P DE +V+ITG +S L+Q
Sbjct: 537 PRDQTPD--ENDEVVVKITGHF--YASQLAQ 563
Score = 40.0 bits (92), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH 181
T + +RMLVP +G +IGK G I+NI +T+++I I + E+
Sbjct: 204 TEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 246
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 24/209 (11%)
Query: 25 SKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-- 82
+KR N G+E E + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 22 TKRSNTGEEGEY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 83 -VPGCDERIVTIYSSSEGTNLFEDS-GEFVSPAQDALFR--VHDRIVAEDSLADDEFGEL 138
PG ER+ + ++E N E V A+ + V + + + ++ D +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQ- 132
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI-LKDEHLPLCALSFDELLQVAG 197
+++VP G +IGKGG ++ + ++ A +++ K E + L + ++ V+G
Sbjct: 133 ----AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQ----ERVVTVSG 184
Query: 198 EPAVVRKALVQIASRLHENPSRSQHLLLS 226
EP V KA+ I ++ E+P S L +S
Sbjct: 185 EPEQVHKAVSAIVQKVQEDPQSSSCLNIS 213
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 26/178 (14%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
E+ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 310 FISTKEFFEDPSPTITAALR-------LQPRCSEKTERESGDPVITTRILVPSAQIGCLI 362
+ F + I A+ LQP+ + +R +++VP++ G +I
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK-----QAKLIVPNSTAGLII 146
Query: 363 GRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLR 420
G+GGA + + + A +++ P+ E +V ++G + A+S + +++
Sbjct: 147 GKGGATVKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 128 DSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD-EHLPLCA 186
+ LA + EL V + VP + +G ++GKGG+ + + T A+I+I K E LP
Sbjct: 398 EKLAAESAKEL----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP--- 450
Query: 187 LSFDELLQVAGEPAVVRKALVQIASRL 213
+ + + + G PA + A I+ R+
Sbjct: 451 GTRNRRVTITGSPAATQAAQYLISQRV 477
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 50 CPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERIVTIYSSSEGT 100
P +G+I+GKGG+ + + + T + I+IS E +PG R VTI S T
Sbjct: 413 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAAT 466
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 184/408 (45%), Gaps = 63/408 (15%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-E 81
G ++ +P T Q+ D R L P + +G+IIGK G ++ + +T+S I I +
Sbjct: 178 GPPRQGSPSATTRQKP--QSDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRK 235
Query: 82 TVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI 141
G E+ +TI+S+ EG S A + + + A+D+ +E I
Sbjct: 236 ENAGAAEKPITIHSTPEG----------CSTACKIIMEIMQK-EAQDTKFTEE------I 278
Query: 142 TVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRI--LKDEHLPLCALSFDELLQVAGEP 199
+++L + +G +IGK G+ ++ I +T +I I L+D L + + + V G
Sbjct: 279 PLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQD----LTLYNPERTITVKGSI 334
Query: 200 AVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
KA +I ++ E+ ++ + + + + G+ L+A +G + S+ +
Sbjct: 335 ETCAKAEEEIMKKIRES---YENDIAAMNLQAHLIPGLNLNA--LGLFPPSSSGIPPPAV 389
Query: 260 REF------------------SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSG 301
++ L PA +G +IGK G IKQ+ + +GASIK+ +
Sbjct: 390 SVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--AP 447
Query: 302 AEGDDC---IIFISTKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQ 357
AEG D ++ I+ P A R+ + E+ + V + I VPS
Sbjct: 448 AEGPDAKLRMVIITG-----PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYA 502
Query: 358 IGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSL 405
G +IG+GG ++E+++ T A + ++ + P D+ +V+ITG
Sbjct: 503 AGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 178/400 (44%), Gaps = 65/400 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++I+S+ EG
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG-- 252
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S A + + + + AD+ + +++L + +G +IGK G+
Sbjct: 253 --------CSAACKMILEIMQKEAKDTKTADE-------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL---HEN 216
++ + TET+ I L+D L + + + V G KA +I ++ +EN
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGSIENCCKAEQEIMKKVREAYEN 353
Query: 217 P----SRSQHL----------LLSSSSNIY--QSSGVYLSAPLVGSYGNYSARRDEASAR 260
S HL L +SSN S V +AP Y ++ E
Sbjct: 354 DVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSSVSGAAP----YSSFMPPEQE---- 405
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDP 320
++ + PA +G +IGK G IKQ+ + + ASIK+ + + T P
Sbjct: 406 --TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----PP 459
Query: 321 SPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A
Sbjct: 460 EAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAE 519
Query: 380 IRILTNENVPKVAYEDEE-MVQITGSLDVASSALSQVTLR 418
+ ++ + P E+E+ +V+I G +S ++Q +R
Sbjct: 520 V-VVPRDQTPD---ENEQVIVKIIGHF--YASQMAQRKIR 553
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 18/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET-VPGCDERIVTIYSSSEGT 100
++TV+ ++ P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 QETVHVFI-PAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 462
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 463 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 506
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 507 KTVNELQNLTAAEVVVPRDQ 526
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 89 KDFYPGTTERVCLIQGTVEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 145
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 146 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 196
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 197 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 230
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTVE 107
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 108 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 167
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 168 ATVKAIMEQSGAWVQL 183
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERI 90
TE+ GS+D V P +G+I+GKGG+ + + + T + I+IS E VPG R
Sbjct: 389 TEKSTDGSKDVV-EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 447
Query: 91 VTIYSSSEGT 100
VTI + T
Sbjct: 448 VTITGTPAAT 457
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISE 371
+T +F SP +A+ +EK+ S D V I VP +G ++G+GG + E
Sbjct: 370 ATNGYFGAASPLAASAIL----GTEKSTDGSKDVV---EIAVPENLVGAILGKGGKTLVE 422
Query: 372 MRSATRASIRILTN-ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
+ T A I+I E VP V ITG+ +A +T R+ T+E +G
Sbjct: 423 YQELTGARIQISKKGEFVPGT---RNRKVTITGTPAATQAAQYLITQRI---TYE-QGVR 475
Query: 431 AAHP 434
AA+P
Sbjct: 476 AANP 479
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 36 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 87
Query: 83 ---VPGCDERIVTIYSSSEGTNLFEDSGEFVS------PAQDALFRVHDRIVAEDSLADD 133
PG ER+ I + E N F++ P A + + ++ D
Sbjct: 88 KDFYPGTTERVCLIQGTIEALNAVHG---FIAEKIREMPQNVAKTEPVSILQPQTTVNPD 144
Query: 134 EFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDE-L 192
+ V+++VP G +IGKGG ++ I ++ A +++ + ++ E +
Sbjct: 145 RIKQ-----VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD----GINLQERV 195
Query: 193 LQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ V+GEP RKA+ I ++ E+P L +S
Sbjct: 196 VTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 229
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 15/136 (11%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCIIFISTKE 315
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I T E
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQ-GTIE 106
Query: 316 FFEDPSPTITAALRLQPRCSEKTERES---------GDPVITTRILVPSAQIGCLIGRGG 366
I +R P+ KTE S D + +I+VP++ G +IG+GG
Sbjct: 107 ALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGG 166
Query: 367 AIISEMRSATRASIRI 382
A + + + A +++
Sbjct: 167 ATVKAIMEQSGAWVQL 182
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERI 90
TE+ GS+D V P +G+I+GKGG+ + + + T + I+IS E VPG R
Sbjct: 388 TEKSTDGSKDVV-EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 446
Query: 91 VTIYSSSEGT 100
VTI + T
Sbjct: 447 VTITGTPAAT 456
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 181/400 (45%), Gaps = 64/400 (16%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVG--------------------SYGNYSARRDEASA 259
++ + + S + G+ L+A VG YG++ +A
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYGSFM----QAPE 404
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFED 319
+E +++ PA +G +IGK G IKQ+ + + ASIK+ + + T
Sbjct: 405 QEM-VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----P 459
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
P A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A
Sbjct: 460 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAA 519
Query: 379 SIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
+ ++ + P D+ +V+I G +S ++Q +R
Sbjct: 520 EV-VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 38/230 (16%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S++
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 88
Query: 83 ---VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHDRI- 124
PG ER+ I + E N E VS Q DRI
Sbjct: 89 KDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIK 148
Query: 125 -------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRIL 177
S D V+++VP G +IGKGG ++ I ++ A +++
Sbjct: 149 QTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS 208
Query: 178 KDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
+ ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 254
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 39/160 (24%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSS-----GAEGDDCII------ 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ S G C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 310 ------FISTK--EFFEDPSPTITAALRLQPRCS--------------EKTERESGDPVI 347
FI+ K E ++ + T ++ LQP+ + T+ DP+
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMT 167
Query: 348 TTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 TSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVV 202
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD--FYPGTTERVCLIQGTIEAL 109
Query: 203 RKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASA 259
IA ++ E P ++++ + + + + P + S ++
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 169
Query: 260 REFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
R ++++ P G +IGKGG +K I ++SGA +++
Sbjct: 170 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL 207
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERI 90
TE+ GS+D V P +G+I+GKGG+ + + + T + I+IS E VPG R
Sbjct: 413 TEKSTDGSKD-VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 471
Query: 91 VTIYSSSEGT 100
VTI + T
Sbjct: 472 VTITGTPAAT 481
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD-EHLPLCALSFDELLQVAGEPAV 201
V + VP + +G ++GKGG+ + + T A+I+I K E +P + + + + G PA
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP---GTRNRKVTITGTPAA 480
Query: 202 VRKALVQIASRL 213
+ A I R+
Sbjct: 481 TQAAQYLITQRI 492
Score = 32.3 bits (72), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVITTRILVPSAQIGCLIGRGGAIISE 371
+T +F SP +A+ +EK+ S D V I VP +G ++G+GG + E
Sbjct: 394 ATNGYFGAASPLAASAIL----GTEKSTDGSKDVV---EIAVPENLVGAILGKGGKTLVE 446
Query: 372 MRSATRASIRILTN-ENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFEREGAL 430
+ T A I+I E VP V ITG+ +A +T R+ T+E +G
Sbjct: 447 YQELTGARIQISKKGEFVPGT---RNRKVTITGTPAATQAAQYLITQRI---TYE-QGVR 499
Query: 431 AAHP 434
AA+P
Sbjct: 500 AANP 503
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + I T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 46/266 (17%)
Query: 31 GDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERI 90
G QR + +E+ + P + +G IIG+GGE + ++++E+ I+I+ G ER
Sbjct: 69 GALVHQRTVITEE----FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERP 124
Query: 91 VTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPAD 150
+ + E + A+ L ++ DR +D T+ + L+PA
Sbjct: 125 CVLTGTPES----------IEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI--LIPAS 172
Query: 151 QIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIA 210
++G VIG+GG+ I+ ++ T ++ +++D LP A D+ L++ G+ V++A +
Sbjct: 173 KVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVL 229
Query: 211 SRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPA 270
+ E A G G++++R S+ + P
Sbjct: 230 EIIREKD----------------------QADFRGVRGDFNSRMGGG-----SIEVSVPR 262
Query: 271 GNIGGVIGKGGGIIKQIRQESGASIK 296
+G VIG+ G +IK+I+ ++G I+
Sbjct: 263 FAVGIVIGRNGEMIKKIQNDAGVRIQ 288
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 112/283 (39%), Gaps = 35/283 (12%)
Query: 27 RRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP-- 84
R PG + I S T+ L P K+G +IG+GGE +KQL+ T + + + P
Sbjct: 149 RNGPGFHND---IDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLP 205
Query: 85 -GCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITV 143
G D+ + + + E E + A FR + D + ++
Sbjct: 206 TGADKPLRITGDAFKVQQAREMVLEIIREKDQADFR---------GVRGDFNSRMGGGSI 256
Query: 144 RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVR 203
+ VP +G VIG+ G++I+ I+ + +I+ D+ +S + QV G P +
Sbjct: 257 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPDRCQ 311
Query: 204 KALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFS 263
A I S L +++ S VG+ G
Sbjct: 312 HA-AHIISELILTAQERDGFGGLAAARGRGRGRGDWS---VGAPGGVQ-----------E 356
Query: 264 LRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDD 306
+ PA G VIGKGG IK I Q+SGA +++ + D
Sbjct: 357 ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 399
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 121/302 (40%), Gaps = 60/302 (19%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
T+IT VP +G +IG+GG+ I I+ E+ +I+I + +P C L+
Sbjct: 76 TVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT------- 128
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P + +A L QI R P H + S+S I +
Sbjct: 129 -GTPESIEQAKRLLGQIVDRCRNGPGF--HNDIDSNSTIQE------------------- 166
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGA--EGDDCIIF 310
++ PA +G VIG+GG IKQ+++ +G + + G G D +
Sbjct: 167 -------------ILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLR 213
Query: 311 ISTKEF-FEDPSPTITAALRLQPRCSEKTERESGDPVI---TTRILVPSAQIGCLIGRGG 366
I+ F + + +R + + + R + + + + VP +G +IGR G
Sbjct: 214 ITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNG 273
Query: 367 AIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFER 426
+I ++++ I+ ++ + E Q+ G D A + + L ER
Sbjct: 274 EMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA-AHIISELILTAQER 327
Query: 427 EG 428
+G
Sbjct: 328 DG 329
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 181/397 (45%), Gaps = 58/397 (14%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYSSSEGTN 101
D R L P + +G+IIGK G ++ + +T+S I + + G E+ ++++S+ EG +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 102 LFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQ 161
S + L +H A+D+ DE + +++L + +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKE--AKDTKTADE------VPLKILAHNNFVGRLIGKEGR 297
Query: 162 VIQNIR--TETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSR 219
++ + TET+ I L+D L + + + V G +A +I ++ E
Sbjct: 298 NLKKVEQDTETKITISSLQD----LTLYNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 220 SQHLLLSSSSNIYQSSGVYLSAPLVGSY-----------------GNYSARRDEASAREF 262
++ + + S + G+ L+A VG + YS+ +A +E
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAA--VGLFPASSSAVPPPPSSVTGAAPYSSFM-QAPEQEM 407
Query: 263 SLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFISTKEFFEDPSP 322
+++ PA +G +IGK G IKQ+ + + ASIK+ + + T P
Sbjct: 408 -VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG----PPEA 462
Query: 323 TITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRASIR 381
A R+ + E+ + V + T I VP++ G +IG+GG ++E+++ T A +
Sbjct: 463 QFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV- 521
Query: 382 ILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLR 418
++ + P D+ +V+I G +S ++Q +R
Sbjct: 522 VVPRDQTPD--ENDQVIVKIIGHF--YASQMAQRKIR 554
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)
Query: 42 EDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISE-TVPGCDERIVTIYSSSEGT 100
E + + P + +G+IIGK G+ +KQL ++I+I+ P R+V I E
Sbjct: 404 EQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQ 463
Query: 101 NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
F+ G R++ ++ E+ E E+ L T + VPA G VIGKGG
Sbjct: 464 --FKAQG-----------RIYGKLKEENFFGPKE--EVKLET-HIRVPASAAGRVIGKGG 507
Query: 161 QVIQNIRTETRAQIRILKDE 180
+ + ++ T A++ + +D+
Sbjct: 508 KTVNELQNLTAAEVVVPRDQ 527
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 97/233 (41%), Gaps = 41/233 (17%)
Query: 23 GGSKRRNPGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISET 82
G +KR N G++ + + L P GSIIGKGG+ + QL+ ET + I++S+
Sbjct: 37 GSTKRTNTGEDGQY--------FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKL 88
Query: 83 ------VPGCDERIVTIYSSSEGTNLFE--------------DSGEFVSPAQDALFRVHD 122
PG ER+ I + E N E VS Q D
Sbjct: 89 SKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPD 148
Query: 123 RI--------VAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQI 174
RI S D V+++VP G +IGKGG ++ + ++ A +
Sbjct: 149 RIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWV 208
Query: 175 RILKDEHLPLCALSFDE-LLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLS 226
++ + ++ E ++ V+GEP RKA+ I ++ E+P L +S
Sbjct: 209 QLSQKPD----GINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNIS 257
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 143 VRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILK-DEHLPLCALSFDELLQVAGEPAV 201
+++L+P+ G +IGKGGQ I ++ ET A I++ K + + + + + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEA 111
Query: 202 VRKALVQIASRLHENP---SRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+ IA ++ E P ++++ + + + + P + S +
Sbjct: 112 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 171
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+R ++++ P G +IGKGG +K + ++SGA +++
Sbjct: 172 SRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 210
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 42/163 (25%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGD--------DCII--- 309
++ L+++ P+ G +IGKGG I Q+++E+GA+IK+ D C+I
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT 108
Query: 310 ---------FISTK--EFFEDPSPTITAALRLQPRCS--------------EKTERESGD 344
FI+ K E ++ + T ++ LQP+ + T+ D
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSI-LQPQTTVNPDRIKQTLPSSPTTTKSSPSD 167
Query: 345 PVITTR-----ILVPSAQIGCLIGRGGAIISEMRSATRASIRI 382
P+ T+R I+VP++ G +IG+GGA + + + A +++
Sbjct: 168 PMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 210
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 34 TEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS---ETVPGCDERI 90
TE+ GS+D V P +G+I+GKGG+ + + + T + I+IS E VPG R
Sbjct: 416 TEKSTDGSKD-VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRK 474
Query: 91 VTIYSSSEGT 100
VTI + T
Sbjct: 475 VTITGTPAAT 484
>sp|C5E0I9|HEK2_ZYGRC Heterogeneous nuclear rnp K-like protein 2 OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=HEK2 PE=3 SV=1
Length = 372
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 39/299 (13%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI--------YSSS 97
+R L L++ +IG G ++ +R I +SE GC +R+++ +S
Sbjct: 62 HRVLLSLKESAKVIGTKGSTIQNVREINHVKIGLSEKQLGCSDRVLSCAGRIINVAHSLG 121
Query: 98 EGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLI------TVRMLVPADQ 151
+ ++ ++ G VS A+ F + I+ + DEF +LTL T R++V Q
Sbjct: 122 QIVSVLKE-GSTVSSAEKYAFHFLNPILPPPT--RDEFQDLTLDEINKIGTSRLMVTNSQ 178
Query: 152 IGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIAS 211
+ +IGKGG I++++ R +I +D LP S + +L++ G P + L+QI+
Sbjct: 179 LSSIIGKGGARIKSLKERHRVKIVASRD-FLP---DSDERILEIQGLPNAITNVLLQISK 234
Query: 212 RLHEN------PSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
L R + L SSS S+ V L+A G S + EF
Sbjct: 235 ILLNELDITFASERRYYPHLRSSS---PSNAVSLAASTSGVQTGASNYLNN----EFKAT 287
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASI----KVDSSGAEGD-DCIIFISTKEFFED 319
L P +G + G+ G I +R+ + I K+D + + D D FI + F++
Sbjct: 288 LKIPESYVGAIAGRRGNRIANLRKFTKTKIIVEKKIDKTVIDVDPDNRTFIILGDHFKN 346
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 15/160 (9%)
Query: 138 LTLITV--RMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQV 195
+TL T+ R+L+ + VIG G IQN+R +I L ++ L C+ D +L
Sbjct: 55 ITLPTINHRVLLSLKESAKVIGTKGSTIQNVREINHVKIG-LSEKQLG-CS---DRVLSC 109
Query: 196 AGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRD 255
AG V +L QI S L E + S S+ + L P + + + D
Sbjct: 110 AGRIINVAHSLGQIVSVLKEGSTVS-----SAEKYAFHFLNPILPPPTRDEFQDLTL--D 162
Query: 256 EASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASI 295
E + S RL+ + +IGKGG IK +++ I
Sbjct: 163 EINKIGTS-RLMVTNSQLSSIIGKGGARIKSLKERHRVKI 201
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 348 TTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDV 407
T+R++V ++Q+ +IG+GGA I ++ R I + + + +P DE +++I G +
Sbjct: 169 TSRLMVTNSQLSSIIGKGGARIKSLKERHRVKI-VASRDFLPD---SDERILEIQGLPNA 224
Query: 408 ASSALSQVT 416
++ L Q++
Sbjct: 225 ITNVLLQIS 233
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 68/312 (21%)
Query: 23 GGSKRR-NPGDETEQRGIGSE-DTVYRYLCPLRK----------------IGSIIGKGGE 64
GG KR+ GD+ E + + S+ D++ L P+ +G IIG+GGE
Sbjct: 106 GGQKRQLEDGDQPESKKLASQGDSISSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGE 165
Query: 65 IVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHD-- 122
+ +++ ++ ++IS G ER V++ + E Q A + D
Sbjct: 166 QINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV-------------QKAKMMLDDIV 212
Query: 123 ---RIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKD 179
R D+ G +++PA + G VIGKGG+ I+ ++ ++ +++D
Sbjct: 213 SRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 272
Query: 180 EHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYL 239
+ D+ L++ G+P V++A + L E R Q
Sbjct: 273 GSQ---NTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQ------------------ 308
Query: 240 SAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDS 299
G + R + S + + P ++G VIG+ G +IK+I+ ++G I+
Sbjct: 309 --------GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQ 360
Query: 300 SGAEGDDCIIFI 311
G + I I
Sbjct: 361 DDGTGPEKIAHI 372
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 46/257 (17%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAG 197
T +T VP +G +IG+GG+ I I+ ++ +++I D LP ++S + G
Sbjct: 143 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVS------LTG 196
Query: 198 EPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR 254
P V+KA L I SR P H + N
Sbjct: 197 APESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQN------------------------ 232
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG---DDCIIFI 311
+ +E ++ PAG G VIGKGG IKQ+++ +G + + G++ D + I
Sbjct: 233 --GTVQE----IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII 286
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIIS 370
+ + LR + + E G + + VP +G +IGR G +I
Sbjct: 287 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIK 346
Query: 371 EMRSATRASIRILTNEN 387
++++ A +RI ++
Sbjct: 347 KIQN--DAGVRIQFKQD 361
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 50/269 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P +G IIG+GGE + +++ ++ ++IS G ER V++ + E
Sbjct: 150 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV------- 202
Query: 108 EFVSPAQDALFRVHD-----RIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
Q A + D R D+ G +++PA + G VIGKGG+
Sbjct: 203 ------QKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGET 256
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
I+ ++ ++ +++D + D+ L++ G+P V++A + L E R Q
Sbjct: 257 IKQLQERAGVKMILIQDGSQ---NTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQ- 309
Query: 223 LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
G + R + S + + P ++G VIG+ G
Sbjct: 310 -------------------------GGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGE 344
Query: 283 IIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+IK+I+ ++G I+ G + I I
Sbjct: 345 MIKKIQNDAGVRIQFKQDDGTGPEKIAHI 373
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 37/273 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
PG + G TV + P K G +IGKGGE +KQL+ +
Sbjct: 221 PGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGV-------------K 267
Query: 90 IVTIYSSSEGTNLFEDSGEFVSP--AQDALFRVHDRIVAEDS--LAD-DEFGELTLITVR 144
++ I S+ TN+ + P Q A V D + D D +E+G +
Sbjct: 268 MILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGID 327
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
+ VP +G VIG+ G++I+ I+ + +I+ +D+ +++ + G P
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPDRCEH 382
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A I L Q L GN+ E + FS+
Sbjct: 383 AARIINDLL-------QSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMT---FSI 432
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P G VIG+GG +K I Q++GA +++
Sbjct: 433 ----PTHKCGLVIGRGGENVKAINQQTGAFVEI 461
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 46/257 (17%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAG 197
T +T VP +G +IG+GG+ I I+ ++ +++I D LP ++S + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVS------LTG 197
Query: 198 EPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR 254
P V+KA L I SR P H + N
Sbjct: 198 APESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQN------------------------ 233
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG---DDCIIFI 311
+ +E ++ PAG G VIGKGG IKQ+++ +G + + G++ D + I
Sbjct: 234 --GTVQE----IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII 287
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIIS 370
+ + LR + + E G V + VP +G +IGR G +I
Sbjct: 288 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIK 347
Query: 371 EMRSATRASIRILTNEN 387
++++ A +RI ++
Sbjct: 348 KIQN--DAGVRIQFKQD 362
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 110/269 (40%), Gaps = 50/269 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P +G IIG+GGE + +++ ++ ++IS G ER V++ + E
Sbjct: 150 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV------- 202
Query: 108 EFVSPAQDALFRVHD-----RIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
Q A + D R D+ G +++PA + G VIGKGG+
Sbjct: 203 ------QKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGET 256
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQH 222
I+ ++ ++ +++D + D+ L++ G+P V++A + L E R Q
Sbjct: 257 IKQLQERAGVKMILIQDGSQ---NTNVDKPLRIIGDPYKVQQACEMVMDILRE---RDQ- 309
Query: 223 LLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGGG 282
G + R + S + + P ++G VIG+ G
Sbjct: 310 -------------------------GGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGE 344
Query: 283 IIKQIRQESGASIKVDSSGAEGDDCIIFI 311
+IK+I+ ++G I+ G + I I
Sbjct: 345 MIKKIQNDAGVRIQFKQDDGTGPEKIAHI 373
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 106/273 (38%), Gaps = 37/273 (13%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
PG + G TV + P K G +IGKGGE +KQL+ +
Sbjct: 221 PGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGV-------------K 267
Query: 90 IVTIYSSSEGTNLFEDSGEFVSP--AQDALFRVHDRIVAEDS--LAD-DEFGELTLITVR 144
++ I S+ TN+ + P Q A V D + D D +E+G +
Sbjct: 268 MILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGID 327
Query: 145 MLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRK 204
+ VP +G VIG+ G++I+ I+ + +I+ +D+ +++ + G P
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPDRCEH 382
Query: 205 ALVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSL 264
A I L Q L GN+ E + FS+
Sbjct: 383 AARIINDLL-------QSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMT---FSI 432
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P G VIG+GG +K I Q++GA +++
Sbjct: 433 ----PTHKCGLVIGRGGENVKAINQQTGAFVEI 461
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 46/257 (17%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAG 197
T +T VP +G +IG+GG+ I I+ ++ +++I D LP ++S + G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVS------LTG 197
Query: 198 EPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR 254
P V+KA L I SR P H + N
Sbjct: 198 APESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQN------------------------ 233
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG---DDCIIFI 311
+ +E ++ PAG G VIGKGG IKQ+++ +G + + G++ D + I
Sbjct: 234 --GTVQE----IMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRII 287
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIIS 370
+ + LR + + E G V + VP +G +IGR G +I
Sbjct: 288 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSGEMIK 347
Query: 371 EMRSATRASIRILTNEN 387
++++ A +RI ++
Sbjct: 348 KIQN--DAGVRIQFKQD 362
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 164/396 (41%), Gaps = 75/396 (18%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P +QR + +E+ Y P +G IIG+GGE + +++ E+ I+I+ G ER
Sbjct: 86 PPMHQQQRSVMTEE----YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPER 141
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD-EFGELTLITVR-MLV 147
+ + E + R+ D+IV + A G+ V+ +++
Sbjct: 142 SCMLTGTPESVQ--------------SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMI 187
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
PA + G VIGKGG+ I+ ++ ++ +++D A D+ L++ G+P V++A
Sbjct: 188 PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQA-- 242
Query: 208 QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR---EFSL 264
+ ++L L+ G + R+E +R +
Sbjct: 243 -------------KEMVLE----------------LIRDQGGFREVRNEYGSRIGGNEGI 273
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS-TKEFFEDPSPT 323
+ P +G VIG+ G +IK+I+ ++G I+ D I I+ + + +
Sbjct: 274 DVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEI 333
Query: 324 ITAALR-------------LQPRCSEKTERESGDP--VITTRILVPSAQIGCLIGRGGAI 368
IT LR + R + G P + +VP+ + G +IG+GG
Sbjct: 334 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGET 393
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
I + + ++ RI N P A + ++ I G+
Sbjct: 394 IKSI--SQQSGARIELQRNPPPNADPNMKLFTIRGT 427
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P G +G +IG+GG I +I+QESG I++ DS G C++ T E ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML-TGTPE-------SVQ 153
Query: 326 AALRLQPRCSEK------TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+A RL + EK G I++P+++ G +IG+GG I +++ RA
Sbjct: 154 SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RAG 211
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
++++ ++ P+ D+ + +ITG A V +R RE
Sbjct: 212 VKMVMIQDGPQNTGADKPL-RITGDPYKVQQAKEMVLELIRDQGGFRE 258
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 62/296 (20%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
+++T VP +G +IG+GG+ I I+ E+ +I+I D LP C L+
Sbjct: 94 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLT------- 146
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P V+ A L QI + P + G GN
Sbjct: 147 -GTPESVQSAKRLLDQIVEKGRPAPG------------FHHGDGP----------GN--- 180
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--GDDCIIF 310
+ +E ++ PA G VIGKGG IKQ+++ +G + + G + G D +
Sbjct: 181 -----AVQE----IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR 231
Query: 311 ISTKEF-FEDPSPTITAALRLQPRC----SEKTERESGDPVITTRILVPSAQIGCLIGRG 365
I+ + + + +R Q +E R G+ I + +P +G +IGR
Sbjct: 232 ITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID--VPIPRFAVGIVIGRN 289
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
G +I ++++ A +RI + P + + QITG D A +T LR+
Sbjct: 290 GEMIKKIQN--DAGVRI---QFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRS 340
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 55/271 (20%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTN----LF 103
Y P +G IIG+GGE + +++ ++ ++IS G ER V++ S E +
Sbjct: 213 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAVQKAKLML 272
Query: 104 ED---SGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGG 160
+D G P Q HD A+ + G + I ++PA + G VIGKGG
Sbjct: 273 DDIVSRGRGGPPGQ-----FHD-------YANGQNGTVQEI----MIPAGKAGLVIGKGG 316
Query: 161 QVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRS 220
+ I+ ++ ++ ++D + D+ L++ G+P V++A + L E R
Sbjct: 317 ETIKQLQERAGVKMIFIQDGSQ---NTNVDKPLRIIGDPYKVQQACEMVMDILRE---RD 370
Query: 221 QHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKG 280
Q G + R + S + + P ++G VIG+
Sbjct: 371 Q--------------------------GGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRS 404
Query: 281 GGIIKQIRQESGASIKVDSSGAEGDDCIIFI 311
G +IK+I+ ++G I+ G + I I
Sbjct: 405 GEMIKKIQNDAGVRIQFKQDDGTGPEKIAHI 435
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 99/263 (37%), Gaps = 38/263 (14%)
Query: 40 GSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEG 99
G TV + P K G +IGKGGE +KQL+ +++ I S+
Sbjct: 293 GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGV-------------KMIFIQDGSQN 339
Query: 100 TNLFEDSGEFVSP--AQDALFRVHDRIVAEDS--LAD-DEFGELTLITVRMLVPADQIGC 154
TN+ + P Q A V D + D D +E+G + + VP +G
Sbjct: 340 TNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGV 399
Query: 155 VIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH 214
VIG+ G++I+ I+ + +I+ +D+ +++ + G P A I L
Sbjct: 400 VIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPERCEHAARIINDLLQ 454
Query: 215 ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIG 274
RS G + G G + P G
Sbjct: 455 S--LRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGG-------------EMTFSIPTHKCG 499
Query: 275 GVIGKGGGIIKQIRQESGASIKV 297
VIG+GG +K I Q+ GA +++
Sbjct: 500 LVIGRGGENVKAINQQRGAFVEI 522
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 103/257 (40%), Gaps = 47/257 (18%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LPLCALSFDELLQVAG 197
T +T VP +G +IG+GG+ I I+ ++ +++I D LP ++S + G
Sbjct: 207 TTVTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVS------LTG 260
Query: 198 EPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARR 254
P V+KA L I SR P H + + Q
Sbjct: 261 SPEAVQKAKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQE-------------------- 300
Query: 255 DEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEG---DDCIIFI 311
++ PAG G VIGKGG IKQ+++ +G + G++ D + I
Sbjct: 301 -----------IMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQNTNVDKPLRII 349
Query: 312 STKEFFEDPSPTITAALRLQPRCSEKTERESGDPVIT-TRILVPSAQIGCLIGRGGAIIS 370
+ + LR + + E G + + VP +G +IGR G +I
Sbjct: 350 GDPYKVQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVIGRSGEMIK 409
Query: 371 EMRSATRASIRILTNEN 387
++++ A +RI ++
Sbjct: 410 KIQN--DAGVRIQFKQD 424
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 43 DTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNL 102
D R LC ++ I+G G + +++SET + I IS + G ERIV + GT
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYV----RGT-- 119
Query: 103 FEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
+D + AL H +++ GE I++ +L+P +GC+IGK G
Sbjct: 120 CDDVAKAYGMIVRALLEEH---------GNEDNGEDIEISINLLIPHHLMGCIIGKRGSR 170
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRL 213
++ I + A++ ++ L LS D +L + G P + A I+ L
Sbjct: 171 LREIEDLSAAKLFASPNQLL----LSNDRILTINGVPDAIHIATFYISQTL 217
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/171 (19%), Positives = 81/171 (47%), Gaps = 14/171 (8%)
Query: 261 EFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS-TKEFFED 319
+ LR++C + ++G G I +I+ E+ A I + ++ + I+++ T +
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDVAK 125
Query: 320 PSPTITAALRLQPRCSEKTERESGDPV-ITTRILVPSAQIGCLIGRGGAIISEMRSATRA 378
I AL E ++G+ + I+ +L+P +GC+IG+ G+ + E+ + A
Sbjct: 126 AYGMIVRAL-----LEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAA 180
Query: 379 SIRILTNENVPKVAYEDEEMVQITG---SLDVASSALSQVTLRLRANTFER 426
+ N+ + ++ ++ I G ++ +A+ +SQ L + + ++
Sbjct: 181 KLFASPNQ----LLLSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQK 227
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 164/396 (41%), Gaps = 75/396 (18%)
Query: 30 PGDETEQRGIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDER 89
P + + R + +E+ Y P +G IIG+GGE + +++ E+ I+I+ G ER
Sbjct: 87 PMHQQQSRSVMTEE----YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPER 142
Query: 90 IVTIYSSSEGTNLFEDSGEFVSPAQDALFRVHDRIVAEDSLADD-EFGELTLITVR-MLV 147
+ + E + R+ D+IV + A G+ V+ +++
Sbjct: 143 SCMLTGTPESVQ--------------SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMI 188
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
PA + G VIGKGG+ I+ ++ ++ +++D A D+ L++ G+P V++A
Sbjct: 189 PASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQA-- 243
Query: 208 QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR---EFSL 264
+ ++L L+ G + R+E +R +
Sbjct: 244 -------------KEMVLE----------------LIRDQGGFREVRNEYGSRIGGNEGI 274
Query: 265 RLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS-TKEFFEDPSPT 323
+ P +G VIG+ G +IK+I+ ++G I+ D I I+ + + +
Sbjct: 275 DVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEI 334
Query: 324 ITAALR-------------LQPRCSEKTERESGDP--VITTRILVPSAQIGCLIGRGGAI 368
IT LR + R + G P + +VP+ + G +IG+GG
Sbjct: 335 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGET 394
Query: 369 ISEMRSATRASIRILTNENVPKVAYEDEEMVQITGS 404
I + + ++ RI + P A + ++ I G+
Sbjct: 395 IKSI--SQQSGARIELQRSPPPNADPNMKLFTIRGT 428
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 19/168 (11%)
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV--DSSGAEGDDCIIFISTKEFFEDPSPTIT 325
P G +G +IG+GG I +I+QESG I++ DS G C++ T E ++
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCML-TGTPE-------SVQ 154
Query: 326 AALRLQPRCSEK------TERESGDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRAS 379
+A RL + EK G I++P+++ G +IG+GG I +++ RA
Sbjct: 155 SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RAG 212
Query: 380 IRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRANTFERE 427
++++ ++ P+ D+ + +ITG A V +R RE
Sbjct: 213 VKMVMIQDGPQNTGADKPL-RITGDPYKVQQAKEMVLELIRDQGGFRE 259
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 62/296 (20%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
+++T VP +G +IG+GG+ I I+ E+ +I+I D LP C L+
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLT------- 147
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P V+ A L QI + P + G GN
Sbjct: 148 -GTPESVQSAKRLLDQIVEKGRPAPG------------FHHGDGP----------GN--- 181
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--GDDCIIF 310
+ +E ++ PA G VIGKGG IKQ+++ +G + + G + G D +
Sbjct: 182 -----AVQE----IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR 232
Query: 311 ISTKEF-FEDPSPTITAALRLQPRC----SEKTERESGDPVITTRILVPSAQIGCLIGRG 365
I+ + + + +R Q +E R G+ I + +P +G +IGR
Sbjct: 233 ITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID--VPIPRFAVGIVIGRN 290
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
G +I ++++ A +RI + P + + QITG D A +T LR+
Sbjct: 291 GEMIKKIQN--DAGVRI---QFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRS 341
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 156/378 (41%), Gaps = 71/378 (18%)
Query: 48 YLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFEDSG 107
Y P +G IIG+GGE + +++ E+ I+I+ G ER + + E
Sbjct: 105 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQ------ 158
Query: 108 EFVSPAQDALFRVHDRIVAEDSLADD-EFGELTLITVR-MLVPADQIGCVIGKGGQVIQN 165
+ R+ D+IV + A G+ V+ +++PA + G VIGKGG+ I+
Sbjct: 159 --------SAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQ 210
Query: 166 IRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLHENPSRSQHLLL 225
++ ++ +++D A D+ L++ G+P V++A + ++L
Sbjct: 211 LQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQA---------------KEMVL 252
Query: 226 SSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAR---EFSLRLVCPAGNIGGVIGKGGG 282
L+ G + R+E +R + + P +G VIG+ G
Sbjct: 253 E----------------LIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGE 296
Query: 283 IIKQIRQESGASIKVDSSGAEGDDCIIFIS-TKEFFEDPSPTITAALR------------ 329
+IK+I+ ++G I+ + I I+ + + + IT LR
Sbjct: 297 MIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGP 356
Query: 330 -LQPRCSEKTERESGDP--VITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNE 386
+ R + G P + +VP+ + G +IG+GG I + + ++ RI
Sbjct: 357 GGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI--SQQSGARIELQR 414
Query: 387 NVPKVAYEDEEMVQITGS 404
N P A + ++ I G+
Sbjct: 415 NPPPNADPNMKLFTIRGT 432
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 106/270 (39%), Gaps = 47/270 (17%)
Query: 38 GIGSEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP---GCDERI---- 90
G G + V + P K G +IGKGGE +KQL+ + + + P G D+ +
Sbjct: 180 GDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG 239
Query: 91 --VTIYSSSEGT-NLFEDSGEFVSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLV 147
+ + E L D G F ++ RI + + + +
Sbjct: 240 DPYKVQQAKEMVLELIRDQGGF----REVRNEYGSRIGGNEG-------------IDVPI 282
Query: 148 PADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALV 207
P +G VIG+ G++I+ I+ + +I+ D+ + + + Q+ G P + A
Sbjct: 283 PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPERIAQITGPPDRCQHAAE 337
Query: 208 QIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLV 267
I L + + + G + P G +EF+ +
Sbjct: 338 IITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGG-------------LQEFN--FI 382
Query: 268 CPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
P G G +IGKGG IK I Q+SGA I++
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIEL 412
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 241 APLVGSYGNYSARRDEASARE-FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-- 297
AP S+G + +R + P G +G +IG+GG I +I+QESG I++
Sbjct: 79 APQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
Query: 298 DSSGAEGDDCIIFISTKEFFEDPSPTITAALRLQPRCSEK------TERESGDPVITTRI 351
DS G C++ T E ++ +A RL + EK G I
Sbjct: 139 DSGGLPERSCML-TGTPE-------SVQSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEI 190
Query: 352 LVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSA 411
++P+++ G +IG+GG I +++ RA ++++ ++ P+ D+ + +ITG A
Sbjct: 191 MIPASKAGLVIGKGGETIKQLQE--RAGVKMVMIQDGPQNTGADKPL-RITGDPYKVQQA 247
Query: 412 LSQVTLRLRANTFERE 427
V +R RE
Sbjct: 248 KEMVLELIRDQGGFRE 263
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 62/296 (20%)
Query: 139 TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEH-LP--LCALSFDELLQV 195
+++T VP +G +IG+GG+ I I+ E+ +I+I D LP C L+
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLT------- 151
Query: 196 AGEPAVVRKA---LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSA 252
G P V+ A L QI + P + G GN
Sbjct: 152 -GTPESVQSAKRLLDQIVEKGRPAPG------------FHHGDGP----------GN--- 185
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAE--GDDCIIF 310
+ +E ++ PA G VIGKGG IKQ+++ +G + + G + G D +
Sbjct: 186 -----AVQE----IMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR 236
Query: 311 ISTKEF-FEDPSPTITAALRLQPRC----SEKTERESGDPVITTRILVPSAQIGCLIGRG 365
I+ + + + +R Q +E R G+ I + +P +G +IGR
Sbjct: 237 ITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGID--VPIPRFAVGIVIGRN 294
Query: 366 GAIISEMRSATRASIRILTNENVPKVAYEDEEMVQITGSLDVASSALSQVTLRLRA 421
G +I ++++ A +RI + P E + QITG D A +T LR+
Sbjct: 295 GEMIKKIQN--DAGVRI---QFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRS 345
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVP 84
+ ++ P K G IIGKGGE +K + ++ + I + P
Sbjct: 379 FNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPP 417
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 31/196 (15%)
Query: 104 EDSGEF-VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E +GEF PA+D + + + S DE EL R+L+ + G VIGKGG+
Sbjct: 14 ETNGEFGKRPAED----MEEEQAFKRSRNTDEMVEL-----RILLQSKNAGAVIGKGGKN 64
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH-ENPSRSQ 221
I+ +RT+ A + + D P LS ++ GE +++K + + L +P+ +
Sbjct: 65 IKALRTDYNASVSV-PDSSGPERILSISADIETIGE--ILKKIIPTLEEGLQLPSPTATS 121
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
L L S A +Y +Y + S + LRL+ GG+IG G
Sbjct: 122 QLPLES------------DAVECLNYQHY-----KGSDFDCELRLLIHQSLAGGIIGVKG 164
Query: 282 GIIKQIRQESGASIKV 297
IK++R+ + +IK+
Sbjct: 165 AKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA--LSQVTLRLRANTF 424
G+ D +A L Q +++ + F
Sbjct: 439 GTQDQIQNAQYLLQNSVKQYSGKF 462
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++ +R+L+ + G VIGKGG+ I+ +RT+ A + + D P LS ++ GE
Sbjct: 42 MVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV-PDSSGPERILSISADIETIGE- 99
Query: 200 AVVRKALVQIASRLH-ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+++K + + L +P+ + L L S A +Y +Y + S
Sbjct: 100 -ILKKIIPTLEEGLQLPSPTATSQLPLES------------DAVECLNYQHY-----KGS 141
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ LRL+ GG+IG G IK++R+ + +IK+
Sbjct: 142 DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA 411
G+ D +A
Sbjct: 439 GTQDQIQNA 447
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 31/196 (15%)
Query: 104 EDSGEF-VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E +GEF PA+D + + + S DE EL R+L+ + G VIGKGG+
Sbjct: 14 ETNGEFGKRPAED----MEEEQAFKRSRNTDEMVEL-----RILLQSKNAGAVIGKGGKN 64
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH-ENPSRSQ 221
I+ +RT+ A + + D P LS ++ GE +++K + + L +P+ +
Sbjct: 65 IKALRTDYNASVSV-PDSSGPERILSISADIETIGE--ILKKIIPTLEEGLQLPSPTATS 121
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
L L S A +Y +Y + S + LRL+ GG+IG G
Sbjct: 122 QLPLES------------DAVECLNYQHY-----KGSDFDCELRLLIHQSLAGGIIGVKG 164
Query: 282 GIIKQIRQESGASIKV 297
IK++R+ + +IK+
Sbjct: 165 AKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA--LSQVTLRLRANTF 424
G+ D +A L Q +++ + F
Sbjct: 439 GTQDQIQNAQYLLQNSVKQYSGKF 462
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++ +R+L+ + G VIGKGG+ I+ +RT+ A + + D P LS ++ GE
Sbjct: 42 MVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV-PDSSGPERILSISADIETIGE- 99
Query: 200 AVVRKALVQIASRLH-ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+++K + + L +P+ + L L S A +Y +Y + S
Sbjct: 100 -ILKKIIPTLEEGLQLPSPTATSQLPLES------------DAVECLNYQHY-----KGS 141
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ LRL+ GG+IG G IK++R+ + +IK+
Sbjct: 142 DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA 411
G+ D +A
Sbjct: 439 GTQDQIQNA 447
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 31/196 (15%)
Query: 104 EDSGEF-VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E +GEF PA+D + + + S DE EL R+L+ + G VIGKGG+
Sbjct: 14 ETNGEFGKRPAED----MEEEQAFKRSRNTDEMVEL-----RILLQSKNAGAVIGKGGKN 64
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH-ENPSRSQ 221
I+ +RT+ A + + D P LS ++ GE +++K + + L +P+ +
Sbjct: 65 IKALRTDYNASVSV-PDSSGPERILSISADIETIGE--ILKKIIPTLEEGLQLPSPTATS 121
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
L L S A +Y +Y + S + LRL+ GG+IG G
Sbjct: 122 QLPLES------------DAVECLNYQHY-----KGSDFDCELRLLIHQSLAGGIIGVKG 164
Query: 282 GIIKQIRQESGASIKV 297
IK++R+ + +IK+
Sbjct: 165 AKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA--LSQVTLRLRANTF 424
G+ D +A L Q +++ + F
Sbjct: 439 GTQDQIQNAQYLLQNSVKQYSGKF 462
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 21/159 (13%)
Query: 140 LITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEP 199
++ +R+L+ + G VIGKGG+ I+ +RT+ A + + D P LS ++ GE
Sbjct: 42 MVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV-PDSSGPERILSISADIETIGE- 99
Query: 200 AVVRKALVQIASRLH-ENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEAS 258
+++K + + L +P+ + L L S A +Y +Y + S
Sbjct: 100 -ILKKIIPTLEEGLQLPSPTATSQLPLES------------DAVECLNYQHY-----KGS 141
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV 297
+ LRL+ GG+IG G IK++R+ + +IK+
Sbjct: 142 DFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L + G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPQSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA 411
G+ D +A
Sbjct: 439 GTQDQIQNA 447
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 253 RRDEASAREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKV-DSSGAEGDDCI--- 308
+R + LR++ + N G VIGKGG IK +R + AS+ V DSSG E I
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISAD 93
Query: 309 ----------IFISTKEFFEDPSPTITAALRLQP---RCSEKTERESGDPVITTRILVPS 355
I + +E + PSPT T+ L L+ C + D R+L+
Sbjct: 94 IETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQ 153
Query: 356 AQIGCLIGRGGAIISEMRSATRASIRIL 383
+ G +IG GA I E+R T+ +I++
Sbjct: 154 SLAGGIIGVKGAKIKELRENTQTTIKLF 181
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 18 DAATNGGSKRRNPGDETEQRGIG-----SEDTVYRYLCPLRKIGSIIGKGGEIVKQLRSE 72
+ TNG +R D E++ E R L + G++IGKGG+ +K LR++
Sbjct: 12 NTETNGEFGKRPAEDMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTD 71
Query: 73 TKSNIRISETVPGCDERIVTIYSSSEGTN--------LFEDSGEFVSPAQDALFRVHDRI 124
+++ + ++ ERI++I + E E+ + SP + +
Sbjct: 72 YNASVSVPDS--SGPERILSISADIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 129
Query: 125 VAEDSLADDEF-GELTLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLP 183
V + L F G +R+L+ G +IG G I+ +R T+ I++ ++
Sbjct: 130 V--ECLNYQHFKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE---- 183
Query: 184 LCALSFDELLQVAGEPAVVRKALVQIASRLHENP 217
C S D ++ + G+P V + + I + E+P
Sbjct: 184 CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 217
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 31/196 (15%)
Query: 104 EDSGEF-VSPAQDALFRVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCVIGKGGQV 162
E +GEF PA+D + + + S DE EL R+L+ + G VIGKGG+
Sbjct: 14 ETNGEFGKRPAED----MEEEQAFKRSRNTDEMVEL-----RILLQSKNAGAVIGKGGKN 64
Query: 163 IQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKALVQIASRLH-ENPSRSQ 221
I+ +RT+ A + + D P LS ++ GE +++K + + L +P+ +
Sbjct: 65 IKALRTDYNASVSV-PDSSGPERILSISADIETIGE--ILKKIIPTLEEGLQLPSPTATS 121
Query: 222 HLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLRLVCPAGNIGGVIGKGG 281
L L S A +Y ++ + S + LRL+ GG+IG G
Sbjct: 122 QLPLES------------DAVECLNYQHF-----KGSDFDCELRLLIHQSLAGGIIGVKG 164
Query: 282 GIIKQIRQESGASIKV 297
IK++R+ + +IK+
Sbjct: 165 AKIKELRENTQTTIKL 180
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 56 GSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTI 93
GSIIGKGG+ +KQ+R E+ ++I+I E + G ++RI+TI
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITI 437
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 262 FSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIKVDSSGAEGDDCIIFIS 312
+ ++ P G +IGKGG IKQIR ESGASIK+D +D II I+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITIT 438
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 343 GDPVITTRILVPSAQIGCLIGRGGAIISEMRSATRASIRILTNENVPKVAYEDEEMVQIT 402
G P+ITT++ +P G +IG+GG I ++R + ASI+I + P ED ++ IT
Sbjct: 384 GGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSED-RIITIT 438
Query: 403 GSLDVASSA--LSQVTLRLRANTF 424
G+ D +A L Q +++ + F
Sbjct: 439 GTQDQIQNAQYLLQNSVKQYSGKF 462
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 135 FGEL--TLITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHL 182
+G+L +IT ++ +P D G +IGKGGQ I+ IR E+ A I+I DE L
Sbjct: 380 YGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPL 427
>sp|C8Z3W4|HEK2_YEAS8 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=HEK2 PE=3 SV=1
Length = 381
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R L L++ IIG G + ++R+ I ISE VPGC +RI++ + N+
Sbjct: 46 HRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILS--CAGNVINVANA 103
Query: 106 SGEFV------SPAQDA----------LFRVHDRIVAEDSLADDEFGELTLIT----VRM 145
G+ V +P + F + I+ S DE +L + VR+
Sbjct: 104 IGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPS--KDEIRDLQQLEDIGYVRL 161
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+V I +IGK G I+++ + +I KD LP S + ++++ G P +
Sbjct: 162 IVANSHISSIIGKAGATIKSLINKHGVKIVASKD-FLP---ASDERIIEIQGFPGSITNV 217
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
L++I+ ++LS + + Y L S G ++ ++ R +
Sbjct: 218 LIEIS-----------EIILSDVDVRFSTERSYFPH-LKKSSGEPTSPSTSSNTR---IE 262
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
L P +G +IG+G IK ++ + +I V+
Sbjct: 263 LKIPELYVGAIIGRGMNRIKNLKTFTKTNIVVE 295
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 37/265 (13%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I R+L+ + +IG G I IR +I I E +P C+ D +L AG
Sbjct: 44 INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGI--SEKVPGCS---DRILSCAGNVI 98
Query: 201 VVRKALVQIASRLHE-NPSRSQHLLLSSSSNIY-QSSGVYLSAPLVGSYGNYSARRDEAS 258
V A+ I L++ NP + + Y L AP + D
Sbjct: 99 NVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIGY 158
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK-------------VDSSGAEGD 305
+RL+ +I +IGK G IK + + G I ++ G G
Sbjct: 159 -----VRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGS 213
Query: 306 DCIIFISTKE-FFEDPSPTITAALRLQPRCSEKTERESGDPV-----ITTRI--LVPSAQ 357
+ I E D + P ++ SG+P TRI +P
Sbjct: 214 ITNVLIEISEIILSDVDVRFSTERSYFPHL----KKSSGEPTSPSTSSNTRIELKIPELY 269
Query: 358 IGCLIGRGGAIISEMRSATRASIRI 382
+G +IGRG I +++ T+ +I +
Sbjct: 270 VGAIIGRGMNRIKNLKTFTKTNIVV 294
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 42 EDTVY-RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYS-SSE 98
ED Y R + I SIIGK G +K L ++ I S + +P DERI+ I
Sbjct: 154 EDIGYVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGS 213
Query: 99 GTNLFEDSGEFVSPAQDALF---RVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCV 155
TN+ + E + D F R + + + S + + + +P +G +
Sbjct: 214 ITNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAI 273
Query: 156 IGKGGQVIQNIRTETRAQIRI 176
IG+G I+N++T T+ I +
Sbjct: 274 IGRGMNRIKNLKTFTKTNIVV 294
>sp|C7GND0|HEK2_YEAS2 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain JAY291) GN=HEK2 PE=3 SV=1
Length = 381
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 46 YRYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRISETVPGCDERIVTIYSSSEGTNLFED 105
+R L L++ IIG G + ++R+ I ISE VPGC +RI++ + N+
Sbjct: 46 HRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILS--CAGNVINVANA 103
Query: 106 SGEFV------SPAQDA----------LFRVHDRIVAEDSLADDEFGELTLIT----VRM 145
G+ V +P + F + I+ S DE +L + VR+
Sbjct: 104 IGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPS--KDEIRDLQQLEDIGYVRL 161
Query: 146 LVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPAVVRKA 205
+V I +IGK G I+++ + +I KD LP S + ++++ G P +
Sbjct: 162 IVANSHISSIIGKAGATIKSLINKHGVKIVASKD-FLP---ASDERIIEIQGFPGSITNV 217
Query: 206 LVQIASRLHENPSRSQHLLLSSSSNIYQSSGVYLSAPLVGSYGNYSARRDEASAREFSLR 265
L++I+ ++LS + + Y L S G ++ ++ R +
Sbjct: 218 LIEIS-----------EIILSDVDVRFSTERSYFPH-LKKSSGEPTSPSTSSNTR---IE 262
Query: 266 LVCPAGNIGGVIGKGGGIIKQIRQESGASIKVD 298
L P +G +IG+G IK ++ + +I V+
Sbjct: 263 LKIPELYVGAIIGRGMNRIKNLKTFTKTNIVVE 295
Score = 39.3 bits (90), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 97/265 (36%), Gaps = 37/265 (13%)
Query: 141 ITVRMLVPADQIGCVIGKGGQVIQNIRTETRAQIRILKDEHLPLCALSFDELLQVAGEPA 200
I R+L+ + +IG G I IR +I I E +P C+ D +L AG
Sbjct: 44 INHRLLLSLKEAAKIIGTKGSTISRIRAANSVKIGI--SEKVPGCS---DRILSCAGNVI 98
Query: 201 VVRKALVQIASRLHE-NPSRSQHLLLSSSSNIY-QSSGVYLSAPLVGSYGNYSARRDEAS 258
V A+ I L++ NP + + Y L AP + D
Sbjct: 99 NVANAIGDIVDVLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIGY 158
Query: 259 AREFSLRLVCPAGNIGGVIGKGGGIIKQIRQESGASIK-------------VDSSGAEGD 305
+RL+ +I +IGK G IK + + G I ++ G G
Sbjct: 159 -----VRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGS 213
Query: 306 DCIIFISTKE-FFEDPSPTITAALRLQPRCSEKTERESGDPV-----ITTRI--LVPSAQ 357
+ I E D + P ++ SG+P TRI +P
Sbjct: 214 ITNVLIEISEIILSDVDVRFSTERSYFPHL----KKSSGEPTSPSTSSNTRIELKIPELY 269
Query: 358 IGCLIGRGGAIISEMRSATRASIRI 382
+G +IGRG I +++ T+ +I +
Sbjct: 270 VGAIIGRGMNRIKNLKTFTKTNIVV 294
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 42 EDTVY-RYLCPLRKIGSIIGKGGEIVKQLRSETKSNIRIS-ETVPGCDERIVTIYS-SSE 98
ED Y R + I SIIGK G +K L ++ I S + +P DERI+ I
Sbjct: 154 EDIGYVRLIVANSHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGS 213
Query: 99 GTNLFEDSGEFVSPAQDALF---RVHDRIVAEDSLADDEFGELTLITVRMLVPADQIGCV 155
TN+ + E + D F R + + + S + + + +P +G +
Sbjct: 214 ITNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAI 273
Query: 156 IGKGGQVIQNIRTETRAQIRI 176
IG+G I+N++T T+ I +
Sbjct: 274 IGRGMNRIKNLKTFTKTNIVV 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,613,194
Number of Sequences: 539616
Number of extensions: 8769989
Number of successful extensions: 29279
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 278
Number of HSP's that attempted gapping in prelim test: 24020
Number of HSP's gapped (non-prelim): 4428
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)