Query 010376
Match_columns 512
No_of_seqs 206 out of 1610
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 05:28:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010376.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010376hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 4.1E-17 1.4E-21 168.2 31.3 364 57-468 5-380 (445)
2 3gia_A Uncharacterized protein 99.7 9.1E-14 3.1E-18 143.1 30.5 240 58-335 4-248 (444)
3 4djk_A Probable glutamate/gamm 99.5 4.9E-12 1.7E-16 132.5 30.3 250 55-337 6-263 (511)
4 2jln_A MHP1; hydantoin, transp 98.6 3E-05 1E-09 80.3 29.0 241 59-333 24-277 (501)
5 3dh4_A Sodium/glucose cotransp 98.3 0.001 3.5E-08 69.3 32.1 156 59-235 19-176 (530)
6 2xq2_A Sodium/glucose cotransp 97.9 0.014 4.7E-07 61.6 29.4 155 59-234 48-204 (593)
7 2wsw_A BCCT family betaine/car 42.0 2.8E+02 0.0097 27.9 12.9 95 129-231 179-276 (509)
8 4ain_A Glycine betaine transpo 38.9 2.1E+02 0.0072 29.0 11.0 111 63-174 97-225 (539)
9 2a65_A Leutaa, Na(+):neurotran 38.3 3.3E+02 0.011 27.5 35.0 107 63-176 10-122 (519)
10 3l1l_A Arginine/agmatine antip 25.9 4.5E+02 0.015 25.2 14.6 47 129-175 260-306 (445)
11 3gia_A Uncharacterized protein 25.6 2.3E+02 0.0079 27.4 9.0 47 130-176 259-305 (444)
12 3tx3_A Uncharacterized protein 23.6 4E+02 0.014 23.9 9.5 36 296-336 22-57 (249)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.80 E-value=4.1e-17 Score=168.24 Aligned_cols=364 Identities=10% Similarity=0.013 Sum_probs=207.6
Q ss_pred cccccccHHHHHHHHHhhhhhhhhhHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccHHHHHH
Q 010376 57 RLKRTGNFWTTSSHIITAVIGSGVLSLAWAIAQLGWVAGPTVLILFALVNLYTANLLSQCYRSGDPVTGQRNYTYMDAVK 136 (512)
Q Consensus 57 ~~~~~~s~~~a~~~li~~~iG~GiL~lP~af~~~G~~~gii~lii~~~~~~~s~~~l~~~~~~~~~~~~~~~~~y~~l~~ 136 (512)
+++|+.|.++.++..+++++|+|++.+|....+.|.. +++..++.++++...+..+.|...+.+. .| .+.+..+
T Consensus 5 ~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p~-~G----g~y~~~~ 78 (445)
T 3l1l_A 5 ADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDPS-PG----GSYAYAR 78 (445)
T ss_dssp --CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCCC-TT----THHHHHH
T ss_pred CCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCCC-CC----CchhhHH
Confidence 3567889999999999999999999999998888975 7888889999999999999998776543 22 3444456
Q ss_pred HhhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccchhhHHHHHHHHhhccCCCcchhh
Q 010376 137 ANLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSNGYMITFGIIEVLFSQIPDFDQVW 216 (512)
Q Consensus 137 ~~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~ 216 (512)
+.+||+.+++..|..++.......++....++.+..+++.. . ......++..++++.+..+ ++...+
T Consensus 79 ~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~~i-n~~g~~ 145 (445)
T 3l1l_A 79 RCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPIL-----------K-DPWVLTITCVVVLWIFVLL-NIVGPK 145 (445)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGG-----------G-SHHHHHHHHHHHHHHHHHH-HHHCHH
T ss_pred hHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccc-----------c-ccHHHHHHHHHHHHHHHHH-HHhchH
Confidence 77999999999999999887777788877777776554310 0 0011111111111111111 333444
Q ss_pred HHHHHHHHHHH---HHHHHHHhhhhhhhhcCCCCCCCccccccccccCCCcccchhhHHHHHHHHHHHHHHhccchhhHh
Q 010376 217 WLSIVAAIMSF---TYSTAGLGLGIGKVAGNRSFKGSLTGISIGTLTSAGTVTGTQKLWRSLQALGAIAFAYSFSIILLE 293 (512)
Q Consensus 217 ~~s~~~~~~~~---~~~~iii~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~ 293 (512)
..+.+..+... ..+++++..++... +.+... +.. . +....++.++..++....|+|.|+..+..
T Consensus 146 ~~~~~~~~~~~~~i~~~~~~~i~~~~~~-~~~~~~---~~~--~-------~~~~~~~~~~~~~~~~~~~af~G~e~~~~ 212 (445)
T 3l1l_A 146 MITRVQAVATVLALIPIVGIAVFGWFWF-RGETYM---AAW--N-------VSGLGTFGAIQSTLNVTLWSFIGVESASV 212 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSTTC-CCCCCC---CC--------------------HHHHHHHHHHTTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-Chhhcc---ccc--C-------ccCCccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 44444443333 22222222222211 111110 111 0 11112345778889999999999999999
Q ss_pred HHhhcCCCchhhhhhhhHHHHHHHHHHHHHHHHHhHhhhhcCCCCCc----ccccccccCCChHHHHHHHHHHHHHHHHh
Q 010376 294 IQDTIRSPPAEYKTMKKATLFSIIVTTTFYLLCGCMGYAAFGDLAPN----NLLTGFGFYNPYWLIDIANAAIVVHLVGA 369 (512)
Q Consensus 294 i~~em~~p~~~~~~~~~~i~~s~~i~~~~Y~~~g~~gy~~fg~~~~~----~il~~~~~~~~~~~~~i~~~~~~i~~~~s 369 (512)
+.+|+|||+ |+.+|++..+..+++++|++..+......+.+.-. +...-+......+...+..+...+....+
T Consensus 213 ~~~e~k~p~---r~ip~a~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 289 (445)
T 3l1l_A 213 AAGVVKNPK---RNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGS 289 (445)
T ss_dssp GGGGBSSHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTT
T ss_pred HHHHhcCcc---ccccHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 999999996 89999999999999999999888877777643211 11110000011233445555555555555
Q ss_pred hhhhccchHHHHHHHhhc-cCCCCcccccccccCCCCccccchhHHHHHHHHHHHHHHHHHHHhcc----chHHHHHHhh
Q 010376 370 YQVFCQPLFAFVEKWSAK-KWPKSDLVTAEYEIPIPFWGVYQLNLFRLVWRTLFVVLTTLISMLLP----FFNDVVGILG 444 (512)
Q Consensus 370 ~pl~~~p~~~~l~~~~~~-~~~~s~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ia~~vp----~~~~i~~l~G 444 (512)
.--.....-+.+...-.+ ..|+ ...+..+.+.| .+-.+-...+.....+....| .++.+.++.+
T Consensus 290 ~~~~~~~~sR~~~~~a~dg~lP~--~~~~~~~~~~P---------~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 358 (445)
T 3l1l_A 290 LGGWTLLAGQTAKAAADDGLFPP--IFARVNKAGTP---------VAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSV 358 (445)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSCG--GGGCCCTTCCC---------HHHHHHHHHHHHHHHHSTTSHHHHCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcH--HHHhcCCCCCC---------HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 433333333444433221 1221 11111111222 111111111111111111123 3566666654
Q ss_pred hhhhhhhhhhhhhhhhhhhccCCC
Q 010376 445 AMGFWPLTVYFPIEMYKAQKKIGR 468 (512)
Q Consensus 445 a~~~~~l~fi~P~~~~l~~~~~~~ 468 (512)
.+..+.|.++++.+++.++++.
T Consensus 359 --~~~~~~y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 359 --IFTLVPYLYTCAALLLLGHGHF 380 (445)
T ss_dssp --HHHHHHHHHHHHHHHHHHSSSS
T ss_pred --HHHHHHHHHHHHHHHHHhhcCc
Confidence 4566899999999998876543
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.65 E-value=9.1e-14 Score=143.07 Aligned_cols=240 Identities=11% Similarity=0.066 Sum_probs=157.0
Q ss_pred ccccccHHHHHHHHHhhhhhhhhhHHHHH-HHHhChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccHHHHHH
Q 010376 58 LKRTGNFWTTSSHIITAVIGSGVLSLAWA-IAQLGWVAGPTVLILFALVNLYTANLLSQCYRSGDPVTGQRNYTYMDAVK 136 (512)
Q Consensus 58 ~~~~~s~~~a~~~li~~~iG~GiL~lP~a-f~~~G~~~gii~lii~~~~~~~s~~~l~~~~~~~~~~~~~~~~~y~~l~~ 136 (512)
++|+.|.++.++..+++++|+|++..|.. ...+|. ..++..++.++++...+..+.|...+.+. .| ..-+..+
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P~-~G----g~y~~~~ 77 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIVS-NA----GPIAFIH 77 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCCC-TT----THHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCCC-CC----cHHHhHH
Confidence 56788999999999999999999987654 666777 57888899999999999999998876553 22 3334555
Q ss_pred HhhCCcc-eeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccchhh-HHHHHHH--HhhccCCCc
Q 010376 137 ANLGGKK-VIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSNGYM-ITFGIIE--VLFSQIPDF 212 (512)
Q Consensus 137 ~~~G~~~-~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~--~pl~~~~~l 212 (512)
+.+|++. .....+..++.....+..+....++.+..+++. ....++. ++..+++ +.+...+..
T Consensus 78 ~~~G~~~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~in~~g~ 144 (444)
T 3gia_A 78 KAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINA-------------PINTFNIAITEIGIVAFFTALNFFGS 144 (444)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-------------CCCHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------CCchHHHHHHHHHHHHHHHHHHHHhH
Confidence 6699962 223356666666777777888888888776531 0111221 1111111 111112244
Q ss_pred chhhHHHHHHHHHHHHHHHHHHhhhhhhhhcCCCCCCCccccccccccCCCcccchhhHHHHHHHHHHHHHHhccchhhH
Q 010376 213 DQVWWLSIVAAIMSFTYSTAGLGLGIGKVAGNRSFKGSLTGISIGTLTSAGTVTGTQKLWRSLQALGAIAFAYSFSIILL 292 (512)
Q Consensus 213 ~~l~~~s~~~~~~~~~~~~iii~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~ 292 (512)
+....++.+.....+...++.+..++..... ++.. + ...+.++.+++.++....|+|.|...+.
T Consensus 145 ~~~~~~~~~~~~~~i~~~~~~ii~~~~~~~~-~~~~---------~------~~~~~g~~~~~~~~~~~~~a~~G~e~~~ 208 (444)
T 3gia_A 145 KAVGRAEFFIVLVKLLILGLFIFAGLITIHP-SYVI---------P------DLAPSAVSGMIFASAIFFLSYMGFGVIT 208 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCG-GGTS---------C------CCSHHHHHHHHHHHHHGGGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh-hhcC---------C------CCCCcchHHHHHHHHHHHHHHHhHHHHH
Confidence 4444444444433333232333333332211 1110 0 1122344577888888999999999999
Q ss_pred hHHhhcCCCchhhhhhhhHHHHHHHHHHHHHHHHHhHhhhhcC
Q 010376 293 EIQDTIRSPPAEYKTMKKATLFSIIVTTTFYLLCGCMGYAAFG 335 (512)
Q Consensus 293 ~i~~em~~p~~~~~~~~~~i~~s~~i~~~~Y~~~g~~gy~~fg 335 (512)
...+|+|||+ |+.+|++..+..+++++|++..+......+
T Consensus 209 ~~~~e~k~P~---r~ip~ai~~~~~~~~~~y~~~~~~~~~~~~ 248 (444)
T 3gia_A 209 NASEHIENPK---KNVPRAIFISILIVMFVYVGVAISAIGNLP 248 (444)
T ss_dssp TTGGGBSSHH---HHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999996 789999999999999999988777665554
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.54 E-value=4.9e-12 Score=132.50 Aligned_cols=250 Identities=10% Similarity=-0.028 Sum_probs=141.7
Q ss_pred CCcccccccHHHHHHHHHhhhhhhhhhHHHHHHHHhChhHHHHHHHHHHHHH-HHHHHHHHHhhh--cCCCCCCcccccH
Q 010376 55 DGRLKRTGNFWTTSSHIITAVIGSGVLSLAWAIAQLGWVAGPTVLILFALVN-LYTANLLSQCYR--SGDPVTGQRNYTY 131 (512)
Q Consensus 55 ~~~~~~~~s~~~a~~~li~~~iG~GiL~lP~af~~~G~~~gii~lii~~~~~-~~s~~~l~~~~~--~~~~~~~~~~~~y 131 (512)
+.+++|+.+.++.++..++.++| +.++|. ....|.. .++..++.+++. ...+..+.|... ..+ .| ..|
T Consensus 6 ~~~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~-~~~~~~i~~~~~~l~~al~~ael~s~~~~P--~G---G~y 76 (511)
T 4djk_A 6 QTGKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFS-LVFFLLLGGILWFIPVGLCAAEMATVDGWE--EG---GVF 76 (511)
T ss_dssp ------CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTH-HHHHHHHHHHHTHHHHHHHHHHHHTTSCC--------CHH
T ss_pred cCccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHcccccCC--CC---Chh
Confidence 34567889999999999999996 567775 4667764 344444444433 347778888776 644 22 244
Q ss_pred HHHHHHhhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccc-hhhH-HHHHHHHhhccC
Q 010376 132 MDAVKANLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSN-GYMI-TFGIIEVLFSQI 209 (512)
Q Consensus 132 ~~l~~~~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-i~~~~~~pl~~~ 209 (512)
. ..++.+||+.+++..|..++.......++....++.+..++... ....+.. .+.+ +..++++.+...
T Consensus 77 ~-~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---------~~~~~~~~~~~~~~~~~~~~~~in~ 146 (511)
T 4djk_A 77 A-WVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWP---------ALNEDPITKTIAALIILWALALTQF 146 (511)
T ss_dssp H-HHHHHHCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCG---------GGTSCSSHHHHHHHHHHHHHHHHHH
T ss_pred h-hHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------ccccCcHHHHHHHHHHHHHHHHHHH
Confidence 4 44556999999999999888887777777777776665442110 0011111 1111 111112222222
Q ss_pred CCcchhhHHHHHHHHHH-HHHHHHHHhhhhhhhhcCCCCC--CCccccccccccCCCcccchhhHHHHHHHHHHHHHHhc
Q 010376 210 PDFDQVWWLSIVAAIMS-FTYSTAGLGLGIGKVAGNRSFK--GSLTGISIGTLTSAGTVTGTQKLWRSLQALGAIAFAYS 286 (512)
Q Consensus 210 ~~l~~l~~~s~~~~~~~-~~~~~iii~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~ 286 (512)
+..+....++.+..... +..+++++..++.....++... .+.+.. .+ .....+...++...+|+|.
T Consensus 147 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~~~~~~~~~~~~a~~ 215 (511)
T 4djk_A 147 GGTKYTARIAKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTF--FP---------DFSKVGTLVVFVAFILSYM 215 (511)
T ss_dssp TCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC------------CC--CC---------CTTSTTTTTTHHHHHHHHT
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccc--CC---------CcccchHHHHHHHHHHHHh
Confidence 34555555544433221 1112223333333332221110 010100 00 0001123345777899999
Q ss_pred cchhhHhHHhhcCCCchhhhhhhhHHHHHHHHHHHHHHHHHhHhhhhcCCC
Q 010376 287 FSIILLEIQDTIRSPPAEYKTMKKATLFSIIVTTTFYLLCGCMGYAAFGDL 337 (512)
Q Consensus 287 ~~~~i~~i~~em~~p~~~~~~~~~~i~~s~~i~~~~Y~~~g~~gy~~fg~~ 337 (512)
|......+.+|+|||+ |+.+|++..++.+++++|++..+.-....+++
T Consensus 216 G~e~~~~~a~E~k~P~---k~ip~ai~~~~~~~~~~y~~~~~~~~~~~~~~ 263 (511)
T 4djk_A 216 GVEASATHVNEMSNPG---RDYPLAMLLLMVAAICLSSVGGLSIAMVIPGN 263 (511)
T ss_dssp TGGGGTGGGSSSSCCT---TTHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred hHHHHHHHHHhccCcc---cchhHHHHHHHHHHHHHHHHHHHHHHeecCHh
Confidence 9999999999999997 89999999999999999999888877777654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.62 E-value=3e-05 Score=80.32 Aligned_cols=241 Identities=9% Similarity=0.046 Sum_probs=128.3
Q ss_pred cccccHHHHHHHHHhhhhhhhhhHHHHHHHH-hChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccHHHHHHH
Q 010376 59 KRTGNFWTTSSHIITAVIGSGVLSLAWAIAQ-LGWVAGPTVLILFALVNLYTANLLSQCYRSGDPVTGQRNYTYMDAVKA 137 (512)
Q Consensus 59 ~~~~s~~~a~~~li~~~iG~GiL~lP~af~~-~G~~~gii~lii~~~~~~~s~~~l~~~~~~~~~~~~~~~~~y~~l~~~ 137 (512)
+|+.+.++-...-++..++.+.+.+...+.. .++.-+++..++..++......+......+ .| .+|..+.|.
T Consensus 24 ~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~----~G---l~~~v~~R~ 96 (501)
T 2jln_A 24 ERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIR----WG---INFTVAARM 96 (501)
T ss_dssp GCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHH----HC---CCHHHHTTT
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhh----cC---CChhhhhHh
Confidence 4555666665555566666666555544333 233444444444444333333333332222 12 479999999
Q ss_pred hhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccc-cchhhHHHHHHHHhhccCCCcchhh
Q 010376 138 NLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMS-SNGYMITFGIIEVLFSQIPDFDQVW 216 (512)
Q Consensus 138 ~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~pl~~~~~l~~l~ 216 (512)
.||+++..+..+...+.++|-...-....++.+..++.... + .+ .....++..++.+++.+. .++.++
T Consensus 97 ~FG~~Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g---------~~~~~v~~~i~~~l~~~~~~~-G~~~i~ 165 (501)
T 2jln_A 97 PFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-G---------FTNLPLWIVIFGAIQVVTTFY-GITFIR 165 (501)
T ss_dssp TSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C---------CCCHHHHHHHHHHHHHHHHTT-HHHHHH
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C---------cchHHHHHHHHHHHHHHHHHh-CHHHHH
Confidence 99999999999999999888888888888888887764221 0 11 123344555555565544 678888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhc--CCCCCCCccccccccccCCCcccchhhHHHHHHHHHHH-HHHhccchhhHh
Q 010376 217 WLSIVAAIMSFTYSTAGLGLGIGKVAG--NRSFKGSLTGISIGTLTSAGTVTGTQKLWRSLQALGAI-AFAYSFSIILLE 293 (512)
Q Consensus 217 ~~s~~~~~~~~~~~~iii~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~faf~~~~~i~~ 293 (512)
++..+.....+..++.+....+.+... ++..+.. . ....+.+..++... .+.-....+.+.
T Consensus 166 ~~~~~~~p~~~i~~i~~~~~~l~~~g~~~~~~~~~~--------------~--~~~~~~f~~ai~~~~~~~~~~~~~~~D 229 (501)
T 2jln_A 166 WMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMG--------------G--ENPGMPFSTAIMIFVGGWIAVVVSIHD 229 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTCC--------------C--SSCCSCHHHHHHHHHTTTHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhccC--------------C--ccchHHHHHHHHHHHHHHHHHHhccCc
Confidence 877777666553333333222222110 0000000 0 00111233333321 121233366899
Q ss_pred HHhhcCCCch-hhhh-------hhhHHHHHHHHHHHHHHHHHhHhhhh
Q 010376 294 IQDTIRSPPA-EYKT-------MKKATLFSIIVTTTFYLLCGCMGYAA 333 (512)
Q Consensus 294 i~~em~~p~~-~~~~-------~~~~i~~s~~i~~~~Y~~~g~~gy~~ 333 (512)
..+.+|+++. ++|+ .......+..+...+..++|+.....
T Consensus 230 ysRy~~~~~~~~~~~~~~~~~~~~~g~~lG~~i~~~~~~~lG~~~~~~ 277 (501)
T 2jln_A 230 IVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVL 277 (501)
T ss_dssp HHTTBCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccccccchhhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998842 0111 33334455556666666666654443
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.33 E-value=0.001 Score=69.25 Aligned_cols=156 Identities=10% Similarity=0.145 Sum_probs=87.4
Q ss_pred cccccHHHHHHHHHhhhhhhh-hhHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccHHHHHHH
Q 010376 59 KRTGNFWTTSSHIITAVIGSG-VLSLAWAIAQLGWVAGPTVLILFALVNLYTANLLSQCYRSGDPVTGQRNYTYMDAVKA 137 (512)
Q Consensus 59 ~~~~s~~~a~~~li~~~iG~G-iL~lP~af~~~G~~~gii~lii~~~~~~~s~~~l~~~~~~~~~~~~~~~~~y~~l~~~ 137 (512)
.|+.+++...+.+..+.+++. .+++|-...+.|+....... ..++.....+..+..-.++.+ ..|..|..++
T Consensus 19 GR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~-~~~~~~~i~~~~~~p~~~~~~------~~T~~e~l~~ 91 (530)
T 3dh4_A 19 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEW-MSAITLIIVGKYFLPIFIEKG------IYTIPEFVEK 91 (530)
T ss_dssp CSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHH-HHHHHHHHHHHHTHHHHHHTT------CCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHH-HHHHHHHHHHHHHHHHHHHcC------CccHHHHHHH
Confidence 466778888888887777755 48889888788875321111 111111122333334344322 2589999998
Q ss_pred hhCCcceeehHHHHHH-HHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccchhhHHHHHHHHhhccCCCcchhh
Q 010376 138 NLGGKKVIFCGLIQYL-NLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSNGYMITFGIIEVLFSQIPDFDQVW 216 (512)
Q Consensus 138 ~~G~~~~~~~~~~~~~-~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~ 216 (512)
-||++.+.+..+...+ +.+..+.+-+...+..++.++. ++....+++.+++...-+....++.+.
T Consensus 92 Rfg~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G--------------i~~~~~i~i~~~i~~~Yt~~GGl~aV~ 157 (530)
T 3dh4_A 92 RFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--------------IPLMYSILGLALFALVYSIYGGLSAVV 157 (530)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--------------CCHHHHHHHHHHHHHHTTC------CC
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------CCHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 8999887776655443 2222333333344555555542 333344455566666667777899999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 010376 217 WLSIVAAIMSFTYSTAGLG 235 (512)
Q Consensus 217 ~~s~~~~~~~~~~~~iii~ 235 (512)
++..++.+.++...+++..
T Consensus 158 ~TD~iQ~~im~~g~~~v~~ 176 (530)
T 3dh4_A 158 WTDVIQVFFLVLGGFMTTY 176 (530)
T ss_dssp SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999998887754444333
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.85 E-value=0.014 Score=61.59 Aligned_cols=155 Identities=10% Similarity=0.151 Sum_probs=85.4
Q ss_pred cccccHHHHHHHHHhhhhhhhh-hHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccHHHHHHH
Q 010376 59 KRTGNFWTTSSHIITAVIGSGV-LSLAWAIAQLGWVAGPTVLILFALVNLYTANLLSQCYRSGDPVTGQRNYTYMDAVKA 137 (512)
Q Consensus 59 ~~~~s~~~a~~~li~~~iG~Gi-L~lP~af~~~G~~~gii~lii~~~~~~~s~~~l~~~~~~~~~~~~~~~~~y~~l~~~ 137 (512)
.|+.+++...+.+..+.+++.. ++.|-...+.|+....... ..++.....+..+..-.++.+ ..|..|..++
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~-~~~~~~~~~~~~~~p~~~r~~------~~T~~e~l~~ 120 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEW-MSAITLIIVGKYFLPIFIEKG------IYTIPEFVEK 120 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHH-HHHHHHHHHHHTHHHHHHHTT------CCSHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHH-HHHHHHHHHHHHHHHHHHhCC------CCCcHHHHHH
Confidence 4667788888888877776555 7888887778864221111 111111122223333333322 2589998888
Q ss_pred hhCCcceeehHHHHHH-HHHHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccchhhHHHHHHHHhhccCCCcchhh
Q 010376 138 NLGGKKVIFCGLIQYL-NLFGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSNGYMITFGIIEVLFSQIPDFDQVW 216 (512)
Q Consensus 138 ~~G~~~~~~~~~~~~~-~~~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~ 216 (512)
-||++.+.+..+...+ ..+.....-+...+..++.++. ++.....++.+++....+..-.++.+.
T Consensus 121 Rfg~~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G--------------i~~~~~i~i~~~i~~~Yt~~GGl~av~ 186 (593)
T 2xq2_A 121 RFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG--------------IPLMYSILGLALFALVYSIYGGLSAVV 186 (593)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHHHHTTC---CC
T ss_pred HccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------ccHHHHHHHHHHHHHHHHHhcchHHHH
Confidence 8999877666544332 2233333334445666666552 233334445556666666777899999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 010376 217 WLSIVAAIMSFTYSTAGL 234 (512)
Q Consensus 217 ~~s~~~~~~~~~~~~iii 234 (512)
++-.++.+..+...+++.
T Consensus 187 ~TD~iQ~iiml~~~l~v~ 204 (593)
T 2xq2_A 187 WTDVIQVFFLVLGGFMTT 204 (593)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998888887765444433
No 7
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=42.01 E-value=2.8e+02 Score=27.87 Aligned_cols=95 Identities=12% Similarity=-0.067 Sum_probs=44.7
Q ss_pred ccHHHHH-HHhhCCcceeehHHHHHHHH-HHHHHHHHHHHhhhHHHhhhhcccccCCCCCCcccccchhhHHHHHHHHhh
Q 010376 129 YTYMDAV-KANLGGKKVIFCGLIQYLNL-FGVAIGYTIAASVSMMAIKRSNCFQKSGGKDPCHMSSNGYMITFGIIEVLF 206 (512)
Q Consensus 129 ~~y~~l~-~~~~G~~~~~~~~~~~~~~~-~g~~i~y~i~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pl 206 (512)
.=|.-++ ++.-|+.|+ ++|+..++.. +|.+.+ +-+...+++.-++... ..+ . ....+..+++...+++.+
T Consensus 179 ~l~PllG~~r~~G~~G~-~IDilav~at~~G~ats-LGlg~~qi~~Gl~~lf-Gi~---~--~~~~qi~ii~vit~~~~~ 250 (509)
T 2wsw_A 179 TLVPLVGEKHVNGLFGT-VVDNFYLVALILAMGTS-LGLATPLVTECIQYLF-GIP---H--TLQLDAIIISCWILLNAI 250 (509)
T ss_dssp GCHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-CCC---C--CHHHHHHHHHHHHHHHHH
T ss_pred HhHhhcCCcccCCchhh-hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHc-CCC---C--ccHHHHHHHHHHHHHHHH
Confidence 3577777 677776665 5555544444 444433 3333333333222110 000 0 111111122223334455
Q ss_pred ccCCCc-chhhHHHHHHHHHHHHHHH
Q 010376 207 SQIPDF-DQVWWLSIVAAIMSFTYST 231 (512)
Q Consensus 207 ~~~~~l-~~l~~~s~~~~~~~~~~~~ 231 (512)
+....+ |.+|+.|.++....+...+
T Consensus 251 Sa~sGl~kGIk~LS~~N~~la~~Ll~ 276 (509)
T 2wsw_A 251 CVAFGLQKGVKIASDVRTYLSFLMLG 276 (509)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 555666 7788888877776664433
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=38.91 E-value=2.1e+02 Score=29.04 Aligned_cols=111 Identities=7% Similarity=-0.097 Sum_probs=52.2
Q ss_pred cHHHHHHHHHhhhhhhhhhHH----HHH-HHHh--C-----hhHHHHHHHHHHHHHHHHHHHHHH---hhhcCCCC--CC
Q 010376 63 NFWTTSSHIITAVIGSGVLSL----AWA-IAQL--G-----WVAGPTVLILFALVNLYTANLLSQ---CYRSGDPV--TG 125 (512)
Q Consensus 63 s~~~a~~~li~~~iG~GiL~l----P~a-f~~~--G-----~~~gii~lii~~~~~~~s~~~l~~---~~~~~~~~--~~ 125 (512)
|.++-...+..+-+|.|++-- |.. +.+- | .-.+.....+=|.+..++.+.+.- ++-.++.. ..
T Consensus 97 S~~sW~aMlF~AGmGiGl~FwgvaEPl~h~~~pP~~~~~eAa~~Am~~t~fHWG~~~WAiYav~glalaY~~yrk~~pl~ 176 (539)
T 4ain_A 97 RTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIVGLAIAYSTFRVGRKQL 176 (539)
T ss_dssp CHHHHHHHHHTTSCCTHHHHHHHHHHHHHHHTCCTTSCSSCHHHHHHHHHHHHSHHHHHHHHHHHHHHHCCCCCTCCCSC
T ss_pred cchHHHHHHHHHhhcchheeehhhhhHHHhcCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhcCCCCCc
Confidence 455666778889999998742 333 1110 1 112333344444444444433332 33222111 11
Q ss_pred cccccHHHHHHH-hhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhh
Q 010376 126 QRNYTYMDAVKA-NLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIK 174 (512)
Q Consensus 126 ~~~~~y~~l~~~-~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~ 174 (512)
.|..=|.-++++ .-|+.| .++|+.-++...+....-+-+...+++.-+
T Consensus 177 iss~l~PllG~r~~~G~~G-~~IDilav~atv~GvatSLGlg~~Qi~~Gl 225 (539)
T 4ain_A 177 LSSAFVPLIGEKGAEGWLG-KLIDILAIIATVFGTACSLGLGALQIGAGL 225 (539)
T ss_dssp TTGGGHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHhhcCCCccCCcch-hhhHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 122246666666 556554 466666665554444444444444444433
No 9
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=38.33 E-value=3.3e+02 Score=27.52 Aligned_cols=107 Identities=15% Similarity=-0.009 Sum_probs=55.7
Q ss_pred cHHHHHHHHHhhhhhhh-hhHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHhh-hc----CCCCCCcccccHHHHHH
Q 010376 63 NFWTTSSHIITAVIGSG-VLSLAWAIAQLGWVAGPTVLILFALVNLYTANLLSQCY-RS----GDPVTGQRNYTYMDAVK 136 (512)
Q Consensus 63 s~~~a~~~li~~~iG~G-iL~lP~af~~~G~~~gii~lii~~~~~~~s~~~l~~~~-~~----~~~~~~~~~~~y~~l~~ 136 (512)
|..+-++..++..+|-| +.-.||-..+-|-..-++..+++.++...-. ++.|.. -+ ... + +-...-+
T Consensus 10 sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPl-l~~E~alGq~~~~~~r--~----~~i~a~~ 82 (519)
T 2a65_A 10 TRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPL-MWIEWAMGRYGGAQGH--G----TTPAIFY 82 (519)
T ss_dssp CHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHH-HHHHHHHHHHHHTTTC--C----SHHHHHH
T ss_pred cHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH-HHHHHHhcccchhccC--C----CHHHHHH
Confidence 34567888889999988 6889999665542222333333333333322 233322 11 110 1 2222222
Q ss_pred HhhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Q 010376 137 ANLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRS 176 (512)
Q Consensus 137 ~~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~ 176 (512)
+.-.+..-..+.+...+..+..++-|.++.+-.+..+..+
T Consensus 83 ~l~~~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s 122 (519)
T 2a65_A 83 LLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKF 122 (519)
T ss_dssp HHSCSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222211223455666666777777888777766666543
No 10
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=25.91 E-value=4.5e+02 Score=25.24 Aligned_cols=47 Identities=19% Similarity=0.221 Sum_probs=41.7
Q ss_pred ccHHHHHHHhhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhh
Q 010376 129 YTYMDAVKANLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKR 175 (512)
Q Consensus 129 ~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~ 175 (512)
..+.++.+..+|+++..++.+...+..+++..+++...+..+..+.+
T Consensus 260 ~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~ 306 (445)
T 3l1l_A 260 SPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAAD 306 (445)
T ss_dssp CTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999999999988887764
No 11
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=25.62 E-value=2.3e+02 Score=27.42 Aligned_cols=47 Identities=9% Similarity=0.087 Sum_probs=38.2
Q ss_pred cHHHHHHHhhCCcceeehHHHHHHHHHHHHHHHHHHHhhhHHHhhhh
Q 010376 130 TYMDAVKANLGGKKVIFCGLIQYLNLFGVAIGYTIAASVSMMAIKRS 176 (512)
Q Consensus 130 ~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~i~y~i~~~~~l~~~~~~ 176 (512)
...++.+..+|+++..++.+...+..+++..+.+...+..+..+.+.
T Consensus 259 ~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~d 305 (444)
T 3gia_A 259 ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKD 305 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 56778888889888888888888888888888888888888777643
No 12
>3tx3_A Uncharacterized protein involved in cysteine BIOS; structural genomics, PSI-biology, NEW YORK consortium on MEM protein structure, nycomps; HET: LDA; 2.30A {Idiomarina loihiensis}
Probab=23.62 E-value=4e+02 Score=23.86 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=24.5
Q ss_pred hhcCCCchhhhhhhhHHHHHHHHHHHHHHHHHhHhhhhcCC
Q 010376 296 DTIRSPPAEYKTMKKATLFSIIVTTTFYLLCGCMGYAAFGD 336 (512)
Q Consensus 296 ~em~~p~~~~~~~~~~i~~s~~i~~~~Y~~~g~~gy~~fg~ 336 (512)
+.+++| ++++.+.....+..++|.......+..+++
T Consensus 22 ~~i~~p-----~lr~~vl~Pllinl~L~~~~~~~~~~~~~~ 57 (249)
T 3tx3_A 22 ELIRTK-----GLRRYVVVPILTNLILFSLAFTWLYGEVDY 57 (249)
T ss_dssp HHHTST-----TTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566 578888888888888877665555444443
Done!