Query 010382
Match_columns 512
No_of_seqs 199 out of 1344
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 05:36:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010382.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010382hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a65a1 f.54.1.1 (A:5-513) Na( 65.8 63 0.0046 31.4 35.6 20 336-355 338-357 (509)
2 d2axtj1 f.23.32.1 (J:7-40) Pho 11.5 1.1E+02 0.0082 18.5 3.2 13 166-178 2-14 (34)
3 d2fc6a1 g.66.1.1 (A:8-44) Targ 10.3 32 0.0023 21.5 0.3 19 1-19 3-21 (37)
4 d2yvxa3 f.57.1.1 (A:276-448) M 9.4 4.4E+02 0.032 21.3 8.5 89 191-295 9-97 (173)
5 d1h2sa_ f.13.1.1 (A:) Sensory 4.3 8.8E+02 0.064 19.8 15.0 22 400-426 70-91 (225)
6 d2bs2c1 f.21.2.1 (C:1-254) Fum 4.0 1E+03 0.073 20.0 8.0 56 70-126 153-208 (254)
7 d1qr0a1 d.150.1.1 (A:1-101) 4' 3.3 1.4E+02 0.01 22.0 0.5 24 1-24 8-31 (101)
8 d2r6gf1 e.70.1.1 (F:13-260) Ma 3.3 5.9E+02 0.043 21.8 5.1 8 487-494 73-80 (248)
9 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 3.0 2.7E+02 0.02 19.2 1.6 11 250-260 55-65 (67)
10 d1tdja2 d.58.18.2 (A:336-423) 2.8 2.6E+02 0.019 20.3 1.6 26 28-62 1-26 (88)
No 1
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=65.82 E-value=63 Score=31.36 Aligned_cols=20 Identities=30% Similarity=0.461 Sum_probs=14.3
Q ss_pred HHHHHHHHHhhhhhHHhhhh
Q 010382 336 YIWGIGLLAAGQSSTITGTY 355 (512)
Q Consensus 336 ~if~igllaAg~sStit~t~ 355 (512)
.+|-+.++.+|.+|.++..-
T Consensus 338 ~lFF~~l~~~gl~s~i~~~e 357 (509)
T d2a65a1 338 FLWFFLLFFAGLTSSIAIMQ 357 (509)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccc
Confidence 47777888888888765443
No 2
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=11.49 E-value=1.1e+02 Score=18.45 Aligned_cols=13 Identities=23% Similarity=0.787 Sum_probs=7.7
Q ss_pred chhHHHHHHHHHH
Q 010382 166 LPLWSGVVITALD 178 (512)
Q Consensus 166 ipl~~gvli~~~~ 178 (512)
+|+|...-++...
T Consensus 2 iPLWlv~tv~G~~ 14 (34)
T d2axtj1 2 IPLWIVATVAGMG 14 (34)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CcEEEeeehhhhh
Confidence 6888755555443
No 3
>d2fc6a1 g.66.1.1 (A:8-44) Target of EGR1 protein 1, TOE1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.32 E-value=32 Score=21.47 Aligned_cols=19 Identities=16% Similarity=0.429 Sum_probs=14.7
Q ss_pred CCccccchhhccccccccc
Q 010382 1 MPPQQHEQEQDHLLPLLAD 19 (512)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (512)
|||+-|+.+++.+|..|+.
T Consensus 3 lpp~s~~~~~~~iC~~FsA 21 (37)
T d2fc6a1 3 LPPATHRPHPTSICDNFSA 21 (37)
T ss_dssp CCTTSCCCCCSCBCSHHHH
T ss_pred CCcccCCCCccchhhhhhh
Confidence 7888888888888877653
No 4
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=9.37 E-value=4.4e+02 Score=21.35 Aligned_cols=89 Identities=16% Similarity=0.188 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheecCChhhhhhcccccCCChhHHHHHHHHHcccchhHHHHHHHHHhhhhccCccchh
Q 010382 191 RKLEAVFAVLIATMALSFAWMFGETKPSGSELLIGILVPKLSSKTIQQAVGVVGCIIMPHNVFLHSALVQSRDIDNNKKG 270 (512)
Q Consensus 191 r~lE~~~~~li~~m~l~F~~~~~~~~P~~~~v~~G~~vP~~~~~~l~~~valvGatImP~n~flhS~lvq~r~~~~~~~~ 270 (512)
+|+-.+...+++.+..+++...+...-+....+. .|+|- +.-.-|+.|+ ||+.+--|....++-
T Consensus 9 ~RlpWL~i~l~~~~~~a~ii~~Fe~~l~~~~~La-~fiPl-----i~~~gGN~G~---------Qs~ti~iR~La~g~i- 72 (173)
T d2yvxa3 9 ARVRWLVILILTGMVTSSILQGFESVLEAVTALA-FYVPV-----LLGTGGNTGN---------QSATLIIRALATRDL- 72 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTTTTTTSCC-CCSHH-----HHHHHHHHHH---------HHHHHHHHHHHTTCS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-----HhcCCchHHH---------HHHHHHHHHHhcccc-
Confidence 4666666667777777777776654443222222 24552 2233344443 666543343322110
Q ss_pred hhHHHHhHHHHHHHHHHHHHHHHHH
Q 010382 271 RVQEALRYYSIESTLALVVSFMINL 295 (512)
Q Consensus 271 ~~~~~~~~~~~d~~~~l~vs~lI~~ 295 (512)
+.++..|.-+.|..+|+....+...
T Consensus 73 ~~~~~~~~l~kE~~vgll~G~~l~~ 97 (173)
T d2yvxa3 73 DLRDWRRVFLKEMGVGLLLGLTLSF 97 (173)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHH
Confidence 1133556667788787777655544
No 5
>d1h2sa_ f.13.1.1 (A:) Sensory rhodopsin II {Archaeon Natronobacterium pharaonis [TaxId: 2257]}
Probab=4.31 E-value=8.8e+02 Score=19.84 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010382 400 LDVLNEWLNVLQSVQIPFALIPLLYLV 426 (512)
Q Consensus 400 l~~l~~~~~Vl~si~LPfalipll~l~ 426 (512)
...-.+|. +..|..++-+..++
T Consensus 70 ~~RYvDW~-----lT~PLll~~l~lla 91 (225)
T d1h2sa_ 70 APRYIDWI-----LTTPLIVYFLGLLA 91 (225)
T ss_dssp HHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred HHHHHHHH-----HHHHHHHHHHHHHH
Confidence 34667775 77898777666554
No 6
>d2bs2c1 f.21.2.1 (C:1-254) Fumarate reductase respiratory complex cytochrome b subunit, FrdC {Wolinella succinogenes [TaxId: 844]}
Probab=3.97 E-value=1e+03 Score=20.01 Aligned_cols=56 Identities=14% Similarity=0.075 Sum_probs=38.8
Q ss_pred hcCCCchhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHHhhHhhhhcCCCHHHHHHhh
Q 010382 70 FLDPGNLEGDLQSGAIAGYSLLWLLLWATAVGLLVQLLSARLGVATGRHLAELCREE 126 (512)
Q Consensus 70 ~~dpG~i~t~~~AGA~~Gy~LLWvllla~~~~~~~Q~lsaRlgvvTG~~L~e~~r~~ 126 (512)
..|+.+.....+.+..+.+-+++++.+..=...=+..++.++|..+++. .+..|+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~fY~l~l~av~lH~~~Gl~s~~~~wG~~~~~~-~~~~R~~ 208 (254)
T d2bs2c1 153 TIGPVSSSFRMVSEWMWPLYLVLLFAVELHGSVGLYRLAVKWGWFDGET-PDKTRAN 208 (254)
T ss_dssp GCSTTHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTC-HHHHHHH
T ss_pred CCCHHHHHHHHhChhHHHHHHHHHHHHHHHHHHhHHHHHHHHhccCCcc-hHhHHHH
Confidence 3566666666666666666666666666667777889999999998888 4444543
No 7
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=3.33 E-value=1.4e+02 Score=22.05 Aligned_cols=24 Identities=13% Similarity=0.472 Sum_probs=17.4
Q ss_pred CCccccchhhccccccccchhhhh
Q 010382 1 MPPQQHEQEQDHLLPLLADDREER 24 (512)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~ 24 (512)
+|++.+++|.+.++..+++++.++
T Consensus 8 ~~~~~~~~~~~~~~~~Ls~~e~~r 31 (101)
T d1qr0a1 8 MDRPLSQEENERFMTFISPEKREK 31 (101)
T ss_dssp CSSCCCHHHHHHHHTTSCHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCHHHHHH
Confidence 366677777777888888877555
No 8
>d2r6gf1 e.70.1.1 (F:13-260) Maltose transport system permease protein MalF {Escherichia coli [TaxId: 562]}
Probab=3.33 E-value=5.9e+02 Score=21.78 Aligned_cols=8 Identities=13% Similarity=0.015 Sum_probs=3.5
Q ss_pred HHHHHHHh
Q 010382 487 FIIYLVSR 494 (512)
Q Consensus 487 ~~~yl~~~ 494 (512)
+.+|++++
T Consensus 73 yT~~iaFT 80 (248)
T d2r6gf1 73 CTIAIAFT 80 (248)
T ss_dssp HHHHGGGB
T ss_pred eEEEEEEE
Confidence 34444444
No 9
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.96 E-value=2.7e+02 Score=19.24 Aligned_cols=11 Identities=18% Similarity=0.537 Sum_probs=5.5
Q ss_pred HHHHHHHHHhh
Q 010382 250 HNVFLHSALVQ 260 (512)
Q Consensus 250 ~n~flhS~lvq 260 (512)
+++|+|+.+.+
T Consensus 55 ~~iYLQt~LA~ 65 (67)
T d1k1fa_ 55 RMIYLQTLLAK 65 (67)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 34555555543
No 10
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=2.79 E-value=2.6e+02 Score=20.25 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=0.0
Q ss_pred CCCceEeccCCCCCCCCCCCCCCccHHHHHHhhch
Q 010382 28 PTEKVVVIGLDDGDLDNLSTAPPFSWKKLWLFTGP 62 (512)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lGP 62 (512)
++|++..+..++. |.+++++...+||
T Consensus 1 ~rE~l~~v~iPEr---------pGaf~~F~~~lg~ 26 (88)
T d1tdja2 1 QREALLAVTIPEE---------KGSFLKFCQLLGG 26 (88)
T ss_dssp CCEEEEEEECCBS---------SSCSHHHHHTTSS
T ss_pred CceEEEEEEcCCC---------ccHHHHHHHhcCc
Done!