BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010388
(512 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 207/478 (43%), Gaps = 43/478 (8%)
Query: 36 PPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTH 95
PPGP WP+IG++ +G PH ++ +S++YG ++Q++ + + L
Sbjct: 13 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQ 72
Query: 96 DVLFAGRPKTAAGKYTTFNYSDITWSP-YGPYWRQARKMCLMELFSAKRLESFEYIRVQX 154
F GRP + N +++SP GP W R++ + L+SF
Sbjct: 73 GDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRL------AQNGLKSFSIASDPA 125
Query: 155 XXXXXXXXXXXXGKPIMLKDHLSDLSLA----------------VISRMVLGKNYTDKQQ 198
+ +L L +L VI + G+ Y Q
Sbjct: 126 SSTSCYLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQ 185
Query: 199 ENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVL 258
E + E+ G + D IP L +L ++ K L +KF F++ ++
Sbjct: 186 ELLSLVNL--NNNFGEVV---GSGNPADFIPILRYLP-NPSLNAFKDLNEKFYSFMQKMV 239
Query: 259 DEHNARRKGVENYVAKDMVDVLLQLADDPSLE----VKIERHGVKAFTQDLIAGGTESSA 314
EH K E +D+ D L++ + L+ V++ + DL G ++
Sbjct: 240 KEH---YKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVT 296
Query: 315 VTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAP 374
+ W++ L+ P + K EELD VIG+ R D +LP+++A + ET R P
Sbjct: 297 TAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVP 356
Query: 375 FLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI--GKSIDVKG 432
F +P + D ++ G+ IPKG V V+ W I LW P+EF PERF+ +ID K
Sbjct: 357 FTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAID-KV 415
Query: 433 HDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLS 490
+++ FG G+R C G ++ + LA LL + +P + +++M I+GL+
Sbjct: 416 LSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGV---KVDMTPIYGLT 470
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 207/483 (42%), Gaps = 54/483 (11%)
Query: 36 PPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTH 95
PP P WP++G++ +G PH ++ +S++YG ++Q++ + + L
Sbjct: 18 PPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQ 77
Query: 96 DVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQXX 155
F GRP T S + GP W R++ + L +F
Sbjct: 78 GDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRL------AQNALNTFSI------ 125
Query: 156 XXXXXXXXXXXGKPIMLKDHLSDLSLAVISRM---VLGKNYTDKQQENEIVTP------- 205
L++H+S + A+ISR+ + G + D N++V
Sbjct: 126 -----ASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPY--NQVVVSVANVIGA 178
Query: 206 ----QEFKAMLDELFLLNG-------VLDIGDSIPWLGFLDLQGN--IKRMKALAKKFDK 252
Q F DE+ L G+ + + L N ++R KA ++F
Sbjct: 179 MCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLW 238
Query: 253 FLEHVLDEHNARRKGVENYVAKDMVDVLLQLADD-PSLEVK-IERHGVKAFTQDLIAGGT 310
FL+ + EH + + +D+ L + + P I + + D+ G
Sbjct: 239 FLQKTVQEH---YQDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGF 295
Query: 311 ESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLH 370
++ + W++ L+ KPEI K +ELD VIG+ER D LP+++A + ET R
Sbjct: 296 DTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHS 355
Query: 371 PVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI---GKS 427
PF +P + D + G+ IPK V V+ W + P LWE P+EF PERF+ G +
Sbjct: 356 SFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTA 415
Query: 428 IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIF 487
I+ K +++ FG G+R C G L I LA LL + +P + ++++ I+
Sbjct: 416 IN-KPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGV---KVDLTPIY 471
Query: 488 GLS 490
GL+
Sbjct: 472 GLT 474
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/473 (27%), Positives = 209/473 (44%), Gaps = 39/473 (8%)
Query: 46 GNLHLIGSLPHRSVH--ALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVLFAGRP 103
G LHL+ P+ +H +L++K GP+ +L+ + + V FAGRP
Sbjct: 36 GFLHLLQ--PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93
Query: 104 KTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQXXXXXXXXXX 163
+ + K + DI+ Y W+ +K+ L R S E Q
Sbjct: 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEPWVDQLTQEFCERMR 152
Query: 164 XXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLL--NGV 221
G P+ ++ S L+ ++I + G +E+ +V F + +L +
Sbjct: 153 VQAGAPVTIQKEFSLLTCSIICYLTFGN------KEDTLV--HAFHDCVQDLMKTWDHWS 204
Query: 222 LDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVA---KDMVD 278
+ I D +P+L F G + R+K + D +E L H E+ VA +DM D
Sbjct: 205 IQILDMVPFLRFFPNPG-LWRLKQAIENRDHMVEKQLRRHK------ESMVAGQWRDMTD 257
Query: 279 VLLQLADDPSLEVK----IERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKA 334
+LQ +E +E H V DL GGTE++A T+ WA++ L+ PEI +
Sbjct: 258 YMLQGVGRQRVEEGPGQLLEGH-VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRL 316
Query: 335 IEELDRVIG---KERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYD 391
EELDR +G V KD LP ++A + E +RL PV P +P ++ GYD
Sbjct: 317 QEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYD 376
Query: 392 IPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYS 451
IP+G V+ ++ ++WE+P+EF P+RF+ G + L FG G R+C G S
Sbjct: 377 IPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLE-----PGANPSALAFGCGARVCLGES 431
Query: 452 LGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR 504
L + LA LL F P + L + G++ + P +V PR
Sbjct: 432 LARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPR 483
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 200/456 (43%), Gaps = 45/456 (9%)
Query: 47 NLHLIGSLP--------HRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVL 98
+L L+GSLP H + L +KYGPI ++ ++AK VL
Sbjct: 15 SLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKD 74
Query: 99 FAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARK--MCLMELFSAKRLESFEYIRVQXXX 156
F+GRP+ A + N I ++ G +W+ R+ M LF + E I Q
Sbjct: 75 FSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGD-QKLEKIICQEIS 133
Query: 157 XXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELF 216
G+ I + + VIS + +Y + E ++ Q + + +
Sbjct: 134 TLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVI--QNYNEGIIDNL 191
Query: 217 LLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAK-- 274
+ ++D+ +PWL K +K HV ++ K +ENY K
Sbjct: 192 SKDSLVDL---VPWLKIFP-----------NKTLEKLKSHVKIRNDLLNKILENYKEKFR 237
Query: 275 -----DMVDVLLQL---------ADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWA 320
+M+D L+Q D E+ + H + D+ G E++ V+W
Sbjct: 238 SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNH-ILTTIGDIFGAGVETTTSVVKWT 296
Query: 321 ISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRA 380
++ L+ P++ +K EE+D+ +G R D L ++A ++E +RL PVAP L+P
Sbjct: 297 LAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHK 356
Query: 381 AREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS-IDVKGHDFELLP 439
A D ++ + + KGT V++++WA+ + W +P++F PERF+ + + LP
Sbjct: 357 ANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLP 416
Query: 440 FGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGN 475
FGAG R C G L + + +A LL F ++P +
Sbjct: 417 FGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD 452
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 201/483 (41%), Gaps = 32/483 (6%)
Query: 36 PPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTH 95
PPGP WP+IGN +G H S L+ +YG + Q++ L
Sbjct: 11 PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ 70
Query: 96 DVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMC--LMELFSAKRLESFE----Y 149
FA RP A+ + + S + + Y +W+ R+ +M F ++ S + +
Sbjct: 71 GSAFADRPSFASFRVVSGGRS-MAFGHYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGH 129
Query: 150 IRVQXXXXXXXXXXXXXGKPIMLKDHLSDLSLA-VISRMVLGKNYT-DKQQENEIVTPQE 207
+ + + L+ +++A V+S + G Y+ D + E+++ E
Sbjct: 130 VLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNE 189
Query: 208 FKAMLDELFLLNGVLDIGDSIPWLGFLD--LQGNIKRMKALAKKFDKF-LEHVLDEHNAR 264
E G + D +PWL + ++ + + L + F F L+ L +
Sbjct: 190 ------EFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESL 243
Query: 265 RKGVENYVAKDMVDVLLQLA------DDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVE 318
R G +DM+D + A D +++ V A D+ ++ + ++
Sbjct: 244 RPGA---APRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQ 300
Query: 319 WAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVP 378
W + + P++ + ELD+V+G++R D NLP++ A + E MR P +P
Sbjct: 301 WLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIP 360
Query: 379 RAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGK-SIDVKGHDFEL 437
A + +V GY IPK T V V+ W++ P W P F P RF+ K + K +
Sbjct: 361 HATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFLDKDGLINKDLTSRV 420
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLST-PRKFP 496
+ F G+R C G L + ++ L H ++ NE M +GL+ P+ F
Sbjct: 421 MIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRA---NPNEPAKMNFSYGLTIKPKSFK 477
Query: 497 LEV 499
+ V
Sbjct: 478 VNV 480
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 202/494 (40%), Gaps = 50/494 (10%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY----- 149
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI 123
Query: 150 -IRVQXXXXXXXXXXXXXG----KPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVT 204
R+Q G P LS VIS +V G + K +E
Sbjct: 124 EERIQEEAGFLIDALRGTGGANIDPTFF---LSRTVSNVISSIVFGDRFDYKDKE----- 175
Query: 205 PQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD----- 259
L L ++ G+ + + +K + ++ + L+ + D
Sbjct: 176 ------FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKK 229
Query: 260 -EHNARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSA 314
EHN R ++ +D +D L + +P+ E ++ + T +L GGTE+ +
Sbjct: 230 VEHNQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLNLFIGGTETVS 285
Query: 315 VTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAP 374
T+ + L+K PE+ K EE+DRVIGK R + +D +P+++A++ E R V P
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
Query: 375 FLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHD 434
+ R ++D + +PKGT V + ++ R PS + P +F P+ F+ + K D
Sbjct: 346 MSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD 405
Query: 435 FELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 494
+PF G+R C G L + ++ F K + + +++ + + + PR
Sbjct: 406 -AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRN 464
Query: 495 FPLEVLAHPRLSPH 508
+ + L PR H
Sbjct: 465 YTMSFL--PRHHHH 476
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 189/456 (41%), Gaps = 32/456 (7%)
Query: 36 PPGPKPWPIIGNLHLIGSLP-HRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P PIIGN+ I +S S+ YGP+ + E K L
Sbjct: 12 PPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALID 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQX 154
+ F+GR + + T I S G W++ R+ L L + + RVQ
Sbjct: 72 NGEEFSGRGNSPISQRITKGLGII--SSNGKRWKEIRRFSLTTLRNFGMGKRSIEDRVQE 129
Query: 155 XXXXXXXX-XXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLD 213
P L VI +V K + D + +N + + F +
Sbjct: 130 EAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRF-DYKDQNFLTLMKRFN---E 185
Query: 214 ELFLLNGV-LDIGDSIPWL--GFLDLQGNIKRMKALAKKF--DKFLEH--VLDEHNARRK 266
+LN + + ++ P L F + + AL + + +K EH LD +N R
Sbjct: 186 NFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPR-- 243
Query: 267 GVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAIS 322
D +D L Q D+ E IE + DL GTE+++ T+ + +
Sbjct: 244 --------DFIDCFLIKMEQEKDNQKSEFNIE--NLVGTVADLFVAGTETTSTTLRYGLL 293
Query: 323 ELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAR 382
L+K PE+ K EE+D VIG+ R +D ++P+ DA+V E R + P VP A
Sbjct: 294 LLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVT 353
Query: 383 EDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGA 442
D Y IPKGT ++ + ++ + PN F P F+ K+ + K D+ +PF A
Sbjct: 354 TDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY-FMPFSA 412
Query: 443 GRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSN 478
G+R+C G L + L +L F K ++ N
Sbjct: 413 GKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKN 448
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 201/491 (40%), Gaps = 44/491 (8%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY----- 149
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI 123
Query: 150 -IRVQXXXXXXXXXXXXXGKP-IMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQE 207
R+Q G I LS VIS +V G + K +E
Sbjct: 124 EERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-------- 175
Query: 208 FKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD------EH 261
L L ++ G+ + + +K + ++ + L+ + D EH
Sbjct: 176 ---FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 262 NARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTV 317
N R ++ +D +D L + +P+ E ++ + T L GGTE+ + T+
Sbjct: 233 NQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLQLFVGGTETVSTTL 288
Query: 318 EWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLV 377
+ L+K PE+ K EE+DRVIGK R + +D +P+++A++ E R V P +
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSL 348
Query: 378 PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFEL 437
R ++D + +PKGT V + ++ R PS + P +F P+ F+ + K D
Sbjct: 349 ARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AF 407
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL 497
+PF G+R C G L + ++ F K + + +++ + + + PR + +
Sbjct: 408 VPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTM 467
Query: 498 EVLAHPRLSPH 508
L PR H
Sbjct: 468 SFL--PRHHHH 476
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 197/456 (43%), Gaps = 47/456 (10%)
Query: 36 PPGPKPWPIIGNLHLI--GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLK 93
PPGP P PIIGNL + ++P +S L++++GP+ L + K L
Sbjct: 12 PPGPFPLPIIGNLFQLELKNIP-KSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALL 70
Query: 94 THDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQ 153
+ F+GR A + I ++ GP W+ R+ L L + + R+Q
Sbjct: 71 DYKDEFSGRGDLPA--FHAHRDRGIIFN-NGPTWKDIRRFSLTTLRNYGMGKQGNESRIQ 127
Query: 154 XXXX-XXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAML 212
G+P + VI+ ++ K++ ++ L
Sbjct: 128 REAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEK-----------FL 176
Query: 213 DELFLLNGVLDIGDSIPWLGFLD--------LQGNIKRMKALAKKFDKFLEHVLDEHNAR 264
++L N + S PWL + L G+ +++ + +++ + EH+
Sbjct: 177 RLMYLFNENFHLL-STPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHH-- 233
Query: 265 RKGVENYVAKDMVDVLLQLADDPSLEVKIERH---------GVKAFTQDLIAGGTESSAV 315
+ ++ +D+ D LL +E++ E+H G+ DL GTE+++
Sbjct: 234 -QSLDPNCPRDLTDCLL-------VEMEKEKHSAERLYTMDGITVTVADLFFAGTETTST 285
Query: 316 TVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPF 375
T+ + + L+K PEI EK EE+DRVIG R KD +P++DA+V E R + P
Sbjct: 286 TLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLVPS 345
Query: 376 LVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDF 435
+P A D GY IPKGT V+ ++ ++ + P +F PE F+ ++ K D+
Sbjct: 346 NLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYSDY 405
Query: 436 ELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
PF G+R+C G L + L +L F K
Sbjct: 406 -FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 201/491 (40%), Gaps = 44/491 (8%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY----- 149
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI 123
Query: 150 -IRVQXXXXXXXXXXXXXGKP-IMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQE 207
R+Q G I LS VIS +V G + K +E
Sbjct: 124 EERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-------- 175
Query: 208 FKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD------EH 261
L L ++ G+ + + +K + ++ + L+ + D EH
Sbjct: 176 ---FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEH 232
Query: 262 NARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTV 317
N R ++ +D +D L + +P+ E ++ + T L GGTE+ + T+
Sbjct: 233 NQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLQLFIGGTETVSTTL 288
Query: 318 EWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLV 377
+ L+K PE+ K EE+DRVIGK R + +D +P+++A++ E R V P +
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSL 348
Query: 378 PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFEL 437
R ++D + +PKGT V + ++ R PS + P +F P+ F+ + K D
Sbjct: 349 ARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AF 407
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL 497
+PF G+R C G L + ++ F K + + +++ + + + PR + +
Sbjct: 408 VPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTM 467
Query: 498 EVLAHPRLSPH 508
L PR H
Sbjct: 468 SFL--PRHHHH 476
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 201/491 (40%), Gaps = 44/491 (8%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY----- 149
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI 123
Query: 150 -IRVQXXXXXXXXXXXXXGKP-IMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQE 207
R+Q G I LS VIS +V G + K +E
Sbjct: 124 EERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKE-------- 175
Query: 208 FKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD------EH 261
L L ++ G+ + + +K + ++ + L+ + D EH
Sbjct: 176 ---FLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEH 232
Query: 262 NARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTV 317
N R ++ +D +D L + +P+ E ++ + T L GGTE+ + T+
Sbjct: 233 NQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLQLFIGGTETVSTTL 288
Query: 318 EWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLV 377
+ L+K PE+ K EE+DRVIGK R + +D +P+++A++ E R V P +
Sbjct: 289 RYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSL 348
Query: 378 PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFEL 437
R ++D + +PKGT V + ++ R PS + P +F P+ F+ + K D
Sbjct: 349 ARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD-AF 407
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPL 497
+PF G+R C G L + ++ F K + + +++ + + + PR + +
Sbjct: 408 VPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRNYTM 467
Query: 498 EVLAHPRLSPH 508
L PR H
Sbjct: 468 SFL--PRHHHH 476
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 191/454 (42%), Gaps = 45/454 (9%)
Query: 36 PPGPKPWPIIGNLHLIGSLP-HRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P+PIIGN+ I + +S+ SE YGP+ + E K L
Sbjct: 12 PPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAVKEALVD 71
Query: 95 HDVLFAGR------PKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFS---AKRLE 145
FAGR K + G F+ + W++ R+ LM L + KR
Sbjct: 72 LGEEFAGRGSVPILEKVSKGLGIAFSNAKT--------WKEMRRFSLMTLRNFGMGKR-- 121
Query: 146 SFEYIRVQXXXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTP 205
S E + P L VI ++ + K +E
Sbjct: 122 SIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEE------ 175
Query: 206 QEFKAMLDELFLLNGVLDIGDSIPWL-------GFLDLQGNIKRMKALAKKFDKFLEHVL 258
F +++ L V +G PWL LD I K L K D ++
Sbjct: 176 --FLKLMESLH--ENVELLG--TPWLQVYNNFPALLDYFPGIH--KTLLKNADYIKNFIM 227
Query: 259 DEHNARRKGVENYVAKDMVDV-LLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTV 317
++ +K ++ +D +D L+++ + +LE +E + DL GTE+++ T+
Sbjct: 228 EKVKEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAV--SDLFGAGTETTSTTL 285
Query: 318 EWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLV 377
+++ L+K PE+ + EE++RVIG+ R +D +P+ DA++ E R + P +
Sbjct: 286 RYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNL 345
Query: 378 PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFEL 437
P A D Y IPKGT ++ S+ ++ + P F P F+ +S + K D+
Sbjct: 346 PHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-F 404
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+PF AG+RMC G L + L ++L F +
Sbjct: 405 MPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 200/494 (40%), Gaps = 50/494 (10%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + + L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY----- 149
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKRGI 123
Query: 150 -IRVQXXXXXXXXXXXXXG----KPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVT 204
R+Q G P LS VIS +V G + K +E
Sbjct: 124 EERIQEEAGFLIDALRGTGGANIDPTFF---LSRTVSNVISSIVFGDRFDYKDKE----- 175
Query: 205 PQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD----- 259
L L ++ G + + +K + ++ + L+ + D
Sbjct: 176 ------FLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKK 229
Query: 260 -EHNARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSA 314
EHN R ++ +D +D L + +P+ E ++ + T +L GTE+ +
Sbjct: 230 VEHNQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLNLFFAGTETVS 285
Query: 315 VTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAP 374
T+ + L+K PE+ K EE+DRVIGK R + +D +P+++A++ E R V P
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIP 345
Query: 375 FLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHD 434
+ R ++D + +PKGT V + ++ R PS + P +F P+ F+ + K D
Sbjct: 346 MGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSD 405
Query: 435 FELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 494
+PF G+R C G L + ++ F K + + +++ + + + PR
Sbjct: 406 -AFVPFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIPRN 464
Query: 495 FPLEVLAHPRLSPH 508
+ + L PR H
Sbjct: 465 YTMSFL--PRHHHH 476
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 178/435 (40%), Gaps = 18/435 (4%)
Query: 45 IGNLHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVLFAGRPK 104
I +L LPH + S+ YG I L ++ K L +FA RP
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC 85
Query: 105 TAAGKYTTFNYSDITWSPYGPYWRQARKMCLMEL-FSAKRLESFEYIRVQXXXXXXXXXX 163
T + S YG W R++ + + +SFE ++
Sbjct: 86 LPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIE 144
Query: 164 XXXGKPIMLKDHLSDLSLAVISRMVLGKNYT----DKQQENEIVTPQEFKAMLDELFLLN 219
G+P K +++ + + ++ G+ +T D Q E+ + A +FL N
Sbjct: 145 TYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYN 204
Query: 220 GVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRK-GVENYVAKDMVD 278
+ PW+G L + + + A +D FL ++++ + RK + + +D
Sbjct: 205 -------AFPWIGILPFGKHQQLFRNAAVVYD-FLSRLIEKASVNRKPQLPQHFVDAYLD 256
Query: 279 VLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEEL 338
+ Q +DPS + + +LI GTE++ + WAI + P I + +E+
Sbjct: 257 EMDQGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI 314
Query: 339 DRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRV 398
D ++G D +P+ +A++ E +R + P + A ED V GY IPKGT V
Sbjct: 315 DLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTV 374
Query: 399 LVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQ 458
+ +++++ W P F+PERF+ S + L+PF GRR C G L +
Sbjct: 375 ITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMF 433
Query: 459 ASLANLLHGFAWKLP 473
LL F P
Sbjct: 434 LFFTALLQRFHLHFP 448
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 178/435 (40%), Gaps = 18/435 (4%)
Query: 45 IGNLHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVLFAGRPK 104
I +L LPH + S+ YG I L ++ K L +FA RP
Sbjct: 26 IYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPC 85
Query: 105 TAAGKYTTFNYSDITWSPYGPYWRQARKMCLMEL-FSAKRLESFEYIRVQXXXXXXXXXX 163
T + S YG W R++ + + +SFE ++
Sbjct: 86 LPLFMKMT-KMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEETKFFNDAIE 144
Query: 164 XXXGKPIMLKDHLSDLSLAVISRMVLGKNYT----DKQQENEIVTPQEFKAMLDELFLLN 219
G+P K +++ + + ++ G+ +T D Q E+ + A +FL N
Sbjct: 145 TYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYN 204
Query: 220 GVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRK-GVENYVAKDMVD 278
+ PW+G L + + + A +D FL ++++ + RK + + +D
Sbjct: 205 -------AFPWIGILPFGKHQQLFRNAAVVYD-FLSRLIEKASVNRKPQLPQHFVDAYLD 256
Query: 279 VLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEEL 338
+ Q +DPS + + +LI GTE++ + WAI + P I + +E+
Sbjct: 257 EMDQGKNDPS--STFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEI 314
Query: 339 DRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRV 398
D ++G D +P+ +A++ E +R + P + A ED V GY IPKGT V
Sbjct: 315 DLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTV 374
Query: 399 LVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQ 458
+ +++++ W P F+PERF+ S + L+PF GRR C G L +
Sbjct: 375 ITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMF 433
Query: 459 ASLANLLHGFAWKLP 473
LL F P
Sbjct: 434 LFFTALLQRFHLHFP 448
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 200/494 (40%), Gaps = 50/494 (10%)
Query: 36 PPGPKPWPIIGN-LHLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P IGN L L + S+ +SE+YGP+ + + K L
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESF------- 147
F+GR G+ TF D + YG + + + FS L F
Sbjct: 72 QAEEFSGR-----GEQATF---DWLFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGI 123
Query: 148 -EYIRVQXXXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGK--NYTDKQQENEIVT 204
E I+ + G I LS VIS +V G +Y DK+
Sbjct: 124 EERIQ-EEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKE------- 175
Query: 205 PQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLD----- 259
L L ++ G + + +K + ++ K L+ + D
Sbjct: 176 ------FLSLLRMMLGSFQFTATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKK 229
Query: 260 -EHNARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSA 314
EHN R ++ +D +D L + +P+ E ++ + T +L GTE+ +
Sbjct: 230 VEHNQRT--LDPNSPRDFIDSFLIRMQEEEKNPNTEFYLK--NLVMTTLNLFFAGTETVS 285
Query: 315 VTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAP 374
T+ + L+K PE+ K EE+DRVIGK R + +D +P+ +A++ E R + P
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLP 345
Query: 375 FLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHD 434
+ +D + +PKGT V + ++ R P + P +F P+ F+ K K D
Sbjct: 346 MGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSD 405
Query: 435 FELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRK 494
+PF G+R C G L + ++ F +K P + + +++ + + + PR
Sbjct: 406 -AFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPKDIDVSPKHVGFATIPRN 464
Query: 495 FPLEVLAHPRLSPH 508
+ + L PR H
Sbjct: 465 YTMSFL--PRHHHH 476
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 118/447 (26%), Positives = 192/447 (42%), Gaps = 28/447 (6%)
Query: 36 PPGPKPWPIIGNLHLIGSLP-HRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P+IGN+ IG +S+ LS+ YGP+ L E K L
Sbjct: 13 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 72
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQX 154
F+GR + + I +S G W++ R+ LM L + + RVQ
Sbjct: 73 LGEEFSGRGIFPLAERANRGFG-IVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 130
Query: 155 XXXXXXXX-XXXXGKPIMLKDHLSDLSLAVISRMVLGK--NYTDKQQENEIVTPQEFKAM 211
P L VI ++ K +Y D+Q N + E +
Sbjct: 131 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIKI 190
Query: 212 LDE--LFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVE 269
L + + N I D P L N+ MK+ ++L++ ++ ++
Sbjct: 191 LSSPWIQICNNFSPIIDYFPGT-HNKLLKNVAFMKS----------YILEKVKEHQESMD 239
Query: 270 NYVAKDMVDVLL-----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISEL 324
+D +D L + + PS E IE ++ DL GTE+++ T+ +A+ L
Sbjct: 240 MNNPQDFIDCFLMKMEKEKHNQPS-EFTIE--SLENTAVDLFGAGTETTSTTLRYALLLL 296
Query: 325 IKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARED 384
+K PE+ K EE++RVIG+ R +D ++P+ DA+V E R + P +P A D
Sbjct: 297 LKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCD 356
Query: 385 CNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGR 444
Y IPKGT +L+S+ ++ + P F P F+ + + K + +PF AG+
Sbjct: 357 IKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKY-FMPFSAGK 415
Query: 445 RMCPGYSLGLKVIQASLANLLHGFAWK 471
R+C G +L + L ++L F K
Sbjct: 416 RICVGEALAGMELFLFLTSILQNFNLK 442
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 119/458 (25%), Positives = 194/458 (42%), Gaps = 50/458 (10%)
Query: 36 PPGPKPWPIIGNLHLIGSLP-HRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P+IGN+ IG +S+ LS+ YGP+ L E K L
Sbjct: 11 PPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALID 70
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQX 154
F+GR + + I +S G W++ R+ LM L + + RVQ
Sbjct: 71 LGEEFSGRGIFPLAERANRGFG-IVFS-NGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQE 128
Query: 155 XXXXXXXX-XXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLD 213
P L VI ++ K + K Q+ L+
Sbjct: 129 EARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQ-----------FLN 177
Query: 214 ELFLLNGVLDIGDSIPWL-------GFLD--------LQGNIKRMKALAKKFDKFLEHVL 258
+ LN ++I S PW+ LD L N+ MK+ ++L
Sbjct: 178 LMEKLNENIEILSS-PWIQVYNNFPALLDYFPGTHNKLLKNVAFMKS----------YIL 226
Query: 259 DEHNARRKGVENYVAKDMVDVLL-----QLADDPSLEVKIERHGVKAFTQDLIAGGTESS 313
++ ++ ++ +D +D L + + PS E IE ++ DL GTE++
Sbjct: 227 EKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS-EFTIE--SLENTAVDLFGAGTETT 283
Query: 314 AVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVA 373
+ T+ +A+ L+K PE+ K EE++RVIG+ R +D ++P+ DA+V E R +
Sbjct: 284 STTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLL 343
Query: 374 PFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGH 433
P +P A D Y IPKGT +L+S+ ++ + P F P F+ + + K
Sbjct: 344 PTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 403
Query: 434 DFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+ +PF AG+R+C G +L + L ++L F K
Sbjct: 404 KY-FMPFSAGKRICVGEALAGMELFLFLTSILQNFNLK 440
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 192/454 (42%), Gaps = 42/454 (9%)
Query: 36 PPGPKPWPIIGNLHLIG-SLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKT 94
PPGP P P+IGN+ I +S+ LS+ YGP+ L E+ K L
Sbjct: 13 PPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALID 72
Query: 95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFS---AKRLESFEYIR 151
F+GR + + I +S G W++ R+ LM L + KR S E
Sbjct: 73 LGEEFSGRGHFPLAERANRGFG-IVFS-NGKRWKEIRRFSLMTLRNFGMGKR--SIEDRV 128
Query: 152 VQXXXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAM 211
+ P L VI ++ K + K Q+
Sbjct: 129 QEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQKRFDYKDQQ-----------F 177
Query: 212 LDELFLLNGVLDIGDSIPWLGFLDLQGNI---------KRMKALAKKFDKFLEH-VLDEH 261
L+ + LN + I S PW+ + I K +K LA F+E +L++
Sbjct: 178 LNLMEKLNENIRIV-STPWIQICNNFPTIIDYFPGTHNKLLKNLA-----FMESDILEKV 231
Query: 262 NARRKGVENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTV 317
++ ++ +D +D L + + E IE + A DL+ GTE+++ T+
Sbjct: 232 KEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITA--ADLLGAGTETTSTTL 289
Query: 318 EWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLV 377
+A+ L+K PE+ K EE++RV+G+ R +D ++P+ DA+V E R + P +
Sbjct: 290 RYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTSL 349
Query: 378 PRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFEL 437
P A D Y IPKGT +L S+ ++ + P F P F+ + + K ++
Sbjct: 350 PHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-F 408
Query: 438 LPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+PF AG+R+C G L + L +L F K
Sbjct: 409 MPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 191/460 (41%), Gaps = 32/460 (6%)
Query: 62 LSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVLFAGRPKTAAGKYTTFN--YSDIT 119
L ++G + L+ + L TH A RP + F +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 120 WSPYGPYWRQARKMCLMELFS-AKRLESFEYIRVQXXXXXXXXXXXXXGKPIMLKDHLSD 178
+ YGP WR+ R+ + L + +S E + G+P L
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 179 LSLAVISRMVLGKN--YTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFL-D 235
VI+ + G+ Y D + + QE + +E L VL+ ++P L +
Sbjct: 159 AVSNVIASLTCGRRFEYDDPRFLRLLDLAQE--GLKEESGFLREVLN---AVPVLLHIPA 213
Query: 236 LQGNIKRM-KALAKKFDKFL-EHVL--DEHNARRKGVENYVAKDMVDVLLQLADDPSLEV 291
L G + R KA + D+ L EH + D R E ++A+ + + +P E
Sbjct: 214 LAGKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAE-----MEKAKGNP--ES 266
Query: 292 KIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEK 351
++ DL + G +++ T+ W + +I P++ + +E+D VIG+ R E
Sbjct: 267 SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMG 326
Query: 352 DIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSL 411
D ++P+ A++ E R + P V D V G+ IPKGT ++ ++ ++ + ++
Sbjct: 327 DQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAV 386
Query: 412 WEKPNEFYPERFIGKSIDVKGHDFE---LLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
WEKP F+PE F +D +GH + LPF AGRR C G L + +LL F
Sbjct: 387 WEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHF 442
Query: 469 AWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 508
++ +P + F +S P E+ A PR H
Sbjct: 443 SFSVPTGQPRPSHHGVFAFLVSPS---PYELCAVPRHHHH 479
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 189/462 (40%), Gaps = 36/462 (7%)
Query: 62 LSEKYGPIMQLKXXXXXXXXXXXXEMAKVVLKTHDVLFAGRPKTAAGKYTTFN--YSDIT 119
L ++G + L+ + L TH A RP + F +
Sbjct: 39 LRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98
Query: 120 WSPYGPYWRQARKMCLMELFS-AKRLESFEYIRVQXXXXXXXXXXXXXGKPIMLKDHLSD 178
+ YGP WR+ R+ + L + +S E + G+P L
Sbjct: 99 LARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDK 158
Query: 179 LSLAVISRMVLGKN--YTDKQQENEIVTPQEFKAMLDELFLLNGVLD---IGDSIPWLGF 233
VI+ + G+ Y D + + QE + +E L VL+ + IP L
Sbjct: 159 AVSNVIASLTCGRRFEYDDPRFLRLLDLAQE--GLKEESGFLREVLNAVPVDRHIPALA- 215
Query: 234 LDLQGNIKRM-KALAKKFDKFL-EHVL--DEHNARRKGVENYVAKDMVDVLLQLADDPSL 289
G + R KA + D+ L EH + D R E ++A+ + + +P
Sbjct: 216 ----GKVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAE-----MEKAKGNP-- 264
Query: 290 EVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVE 349
E ++ DL + G +++ T+ W + +I P++ + +E+D VIG+ R E
Sbjct: 265 ESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE 324
Query: 350 EKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHP 409
D ++P+ A++ E R + P + D V G+ IPKGT ++ ++ ++ +
Sbjct: 325 MGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDE 384
Query: 410 SLWEKPNEFYPERFIGKSIDVKGHDFE---LLPFGAGRRMCPGYSLGLKVIQASLANLLH 466
++WEKP F+PE F +D +GH + LPF AGRR C G L + +LL
Sbjct: 385 AVWEKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 467 GFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH 508
F++ +P + F +S P E+ A PR H
Sbjct: 441 HFSFSVPTGQPRPSHHGVFAFLVSPS---PYELCAVPRHHHH 479
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 192/462 (41%), Gaps = 61/462 (13%)
Query: 37 PGPKPWPIIGNL---HLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL- 92
PGP P P +GN+ H + H +KYG + +M K VL
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFDMECH---KKYGKVWGFYDGQQPVLAITDPDMIKTVLV 75
Query: 93 -KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIR 151
+ + V RP G F S I+ + W++ R + L F++ +L+ I
Sbjct: 76 KECYSVFTNRRPFGPVG----FMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPII 129
Query: 152 VQX--XXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFK 209
Q GKP+ LKD S+ VI+ G N + K
Sbjct: 130 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 189
Query: 210 AM----LDELFLLNGVLDIGDSIPWLGFLD-----------LQGNIKRMKA-----LAKK 249
+ LD FL V IP L L+ L+ ++KRMK K
Sbjct: 190 LLRFDFLDPFFLSITVFPF--LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKH 247
Query: 250 FDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGG 309
FL+ ++D N+ K E++ A ++++ Q + I G
Sbjct: 248 RVDFLQLMIDSQNS--KETESHKALSDLELVAQ-------------------SIIFIFAG 286
Query: 310 TESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRL 369
E+++ + + + EL P++ +K EE+D V+ + ++ + ++D +V ET+RL
Sbjct: 287 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 346
Query: 370 HPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSID 429
P+A + R ++D + G IPKG V++ +A+ R P W +P +F PERF K+ D
Sbjct: 347 FPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 405
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+ PFG+G R C G L ++ +L +L F++K
Sbjct: 406 -NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 192/462 (41%), Gaps = 61/462 (13%)
Query: 37 PGPKPWPIIGNL---HLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL- 92
PGP P P +GN+ H + H +KYG + +M K VL
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFDMECH---KKYGKVWGFYDGQQPVLAITDPDMIKTVLV 74
Query: 93 -KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIR 151
+ + V RP G F S I+ + W++ R + L F++ +L+ I
Sbjct: 75 KECYSVFTNRRPFGPVG----FMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPII 128
Query: 152 VQX--XXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFK 209
Q GKP+ LKD S+ VI+ G N + K
Sbjct: 129 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 188
Query: 210 AM----LDELFLLNGVLDIGDSIPWLGFLD-----------LQGNIKRMKA-----LAKK 249
+ LD FL V IP L L+ L+ ++KRMK K
Sbjct: 189 LLRFDFLDPFFLSITVFPF--LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKH 246
Query: 250 FDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGG 309
FL+ ++D N+ K E++ A ++++ Q + I G
Sbjct: 247 RVDFLQLMIDSQNS--KETESHKALSDLELVAQ-------------------SIIFIFAG 285
Query: 310 TESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRL 369
E+++ + + + EL P++ +K EE+D V+ + ++ + ++D +V ET+RL
Sbjct: 286 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 345
Query: 370 HPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSID 429
P+A + R ++D + G IPKG V++ +A+ R P W +P +F PERF K+ D
Sbjct: 346 FPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 404
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+ PFG+G R C G L ++ +L +L F++K
Sbjct: 405 -NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 192/462 (41%), Gaps = 61/462 (13%)
Query: 37 PGPKPWPIIGNL---HLIGSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL- 92
PGP P P +GN+ H + H +KYG + +M K VL
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFDMECH---KKYGKVWGFYDGQQPVLAITDPDMIKTVLV 73
Query: 93 -KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIR 151
+ + V RP G F S I+ + W++ R + L F++ +L+ I
Sbjct: 74 KECYSVFTNRRPFGPVG----FMKSAISIAE-DEEWKRLRSL-LSPTFTSGKLKEMVPII 127
Query: 152 VQX--XXXXXXXXXXXXGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFK 209
Q GKP+ LKD S+ VI+ G N + K
Sbjct: 128 AQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKK 187
Query: 210 AM----LDELFLLNGVLDIGDSIPWLGFLD-----------LQGNIKRMKA-----LAKK 249
+ LD FL V IP L L+ L+ ++KRMK K
Sbjct: 188 LLRFDFLDPFFLSITVFPF--LIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKH 245
Query: 250 FDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGG 309
FL+ ++D N+ K E++ A ++++ Q + I G
Sbjct: 246 RVDFLQLMIDSQNS--KETESHKALSDLELVAQ-------------------SIIFIFAG 284
Query: 310 TESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRL 369
E+++ + + + EL P++ +K EE+D V+ + ++ + ++D +V ET+RL
Sbjct: 285 YETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRL 344
Query: 370 HPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSID 429
P+A + R ++D + G IPKG V++ +A+ R P W +P +F PERF K+ D
Sbjct: 345 FPIA-MRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKD 403
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWK 471
+ PFG+G R C G L ++ +L +L F++K
Sbjct: 404 -NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFK 444
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 189/450 (42%), Gaps = 30/450 (6%)
Query: 36 PPGPKPWPIIGNLHLI---GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL 92
PPGP P P++GNL + G L RS L EKYG + + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCL--MELFSAKRLESFEYI 150
F+GR K A Y I + G WR R+ L M F + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVQXXXXXXXXXXXXXGKPIMLKDHL--SDLSLAVISRMVLGKNYTDKQQENEIVTPQEF 208
+ + K +L + L ++ +I +V GK + K + F
Sbjct: 128 QEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 209 KAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKG 267
++ + V ++ + GFL G +++ ++ + F+ +++H R
Sbjct: 185 QSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH---RAT 236
Query: 268 VENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
++ +D +DV L + DPS E + + + L A GTE+++ T+ +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS--LFAAGTETTSTTLRYGFLL 294
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
++K P + E+ +E+++VIG R D +P+ DA++ E RL + PF VP +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAG 443
D GY IPK T V + + P +E PN F P F+ + +K ++ +PF G
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLG 413
Query: 444 RRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R+C G + + +L F+ P
Sbjct: 414 KRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 188/450 (41%), Gaps = 30/450 (6%)
Query: 36 PPGPKPWPIIGNLHLI---GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL 92
PPGP P P++GNL + G L RS L EKYG + + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCL--MELFSAKRLESFEYI 150
F+GR K A Y I + G WR R+ L M F + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVQXXXXXXXXXXXXXGKPIMLKDHL--SDLSLAVISRMVLGKNYTDKQQENEIVTPQEF 208
+ + K +L + L ++ +I +V GK + K + F
Sbjct: 128 QEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 209 KAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKG 267
++ + V ++ + GFL G +++ ++ + F+ +++H R
Sbjct: 185 QSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH---RAT 236
Query: 268 VENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
++ +D +DV L + DPS E + + + L GTE+++ T+ +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS--LFFAGTETTSTTLRYGFLL 294
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
++K P + E+ +E+++VIG R D +P+ DA++ E RL + PF VP +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAG 443
D GY IPK T V + + P +E PN F P F+ + +K ++ +PF G
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLG 413
Query: 444 RRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R+C G + + +L F+ P
Sbjct: 414 KRICAGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 188/450 (41%), Gaps = 30/450 (6%)
Query: 36 PPGPKPWPIIGNLHLI---GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL 92
PPGP P P++GNL + G L RS L EKYG + + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCL--MELFSAKRLESFEYI 150
F+GR K A Y I + G WR R+ L M F + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVQXXXXXXXXXXXXXGKPIMLKDHL--SDLSLAVISRMVLGKNYTDKQQENEIVTPQEF 208
+ + K +L + L ++ +I +V GK + K + F
Sbjct: 128 QEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 209 KAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKG 267
++ + V ++ + GFL G +++ ++ + F+ +++H R
Sbjct: 185 QSFSLISSFSSQVFEL-----FSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKH---RAT 236
Query: 268 VENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
++ +D +DV L + DPS E + + + L GTE+++ T+ +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS--LFFAGTETTSTTLRYGFLL 294
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
++K P + E+ +E+++VIG R D +P+ DA++ E RL + PF VP +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAG 443
D GY IPK T V + + P +E PN F P F+ + +K ++ +PF G
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLG 413
Query: 444 RRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R+C G + + +L F+ P
Sbjct: 414 KRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 188/450 (41%), Gaps = 30/450 (6%)
Query: 36 PPGPKPWPIIGNLHLI---GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL 92
PPGP P P++GNL + G L RS L EKYG + + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCL--MELFSAKRLESFEYI 150
F+GR K A Y I + G WR R+ L M F + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVQXXXXXXXXXXXXXGKPIMLKDHL--SDLSLAVISRMVLGKNYTDKQQENEIVTPQEF 208
+ + K +L + L ++ +I +V GK + K + F
Sbjct: 128 QEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 209 KAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKG 267
++ + V ++ + GFL G +++ ++ + F+ +++H R
Sbjct: 185 QSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH---RAT 236
Query: 268 VENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
++ +D +DV L + DPS E + + + L GTE+++ T+ +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS--LFFAGTETTSTTLRYGFLL 294
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
++K P + E+ +E+++VIG R D +P+ DA++ E RL + PF VP +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAG 443
D GY IPK T V + + P +E PN F P F+ + +K ++ +PF G
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLG 413
Query: 444 RRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R+C G + + +L F+ P
Sbjct: 414 KRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 188/450 (41%), Gaps = 30/450 (6%)
Query: 36 PPGPKPWPIIGNLHLI---GSLPHRSVHALSEKYGPIMQLKXXXXXXXXXXXXEMAKVVL 92
PPGP P P++GNL + G L RS L EKYG + + + + L
Sbjct: 12 PPGPSPLPVLGNLLQMDRKGLL--RSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREAL 69
Query: 93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCL--MELFSAKRLESFEYI 150
F+GR K A Y I + G WR R+ L M F + E I
Sbjct: 70 VDQAEAFSGRGKIAVVDPIFQGYGVIFAN--GERWRALRRFSLATMRDFGMGKRSVEERI 127
Query: 151 RVQXXXXXXXXXXXXXGKPIMLKDHL--SDLSLAVISRMVLGKNYTDKQQENEIVTPQEF 208
+ + K +L + L ++ +I +V GK + K + F
Sbjct: 128 QEEARCLVEELRK---SKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFF 184
Query: 209 KAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKG 267
++ + V ++ + GFL G +++ ++ + F+ +++H R
Sbjct: 185 QSFSLISSFSSQVFEL-----FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKH---RAT 236
Query: 268 VENYVAKDMVDVLL----QLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
++ +D +DV L + DPS E + + + L GTE+++ T+ +
Sbjct: 237 LDPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLS--LFFAGTETTSTTLRYGFLL 294
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
++K P + E+ +E+++VIG R D +P+ DA++ E RL + PF VP +
Sbjct: 295 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTK 354
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAG 443
D GY IPK T V + + P +E PN F P F+ + +K ++ +PF G
Sbjct: 355 DTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE-GFMPFSLG 413
Query: 444 RRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R+C G + + +L F+ P
Sbjct: 414 KRICLGEGIARTELFLFFTTILQNFSIASP 443
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 139/305 (45%), Gaps = 20/305 (6%)
Query: 176 LSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELF----LLNGVLDIGDSIPWL 231
++ +I +V GK + + QE F ML+ + L++ V + +
Sbjct: 152 FQSITANIICSIVFGKRFHYQDQE--------FLKMLNLFYQTFSLISSVFGQLFEL-FS 202
Query: 232 GFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDV-LLQLADDPS- 288
GFL G +++ ++ + ++ H +++H R+ ++ +D++D LL + + S
Sbjct: 203 GFLKHFPGAHRQVYKNLQEINAYIGHSVEKH---RETLDPSAPRDLIDTYLLHMEKEKSN 259
Query: 289 LEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWV 348
+ + T L GTE+++ T+ + ++K P + E+ E+++VIG R
Sbjct: 260 AHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPP 319
Query: 349 EEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRH 408
E D +P+ +A++ E R + P VP + + GY IPK T V + +
Sbjct: 320 ELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHD 379
Query: 409 PSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
P +EKP+ F P+ F+ + +K + +PF G+R+C G + + +L F
Sbjct: 380 PHYFEKPDAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNF 438
Query: 469 AWKLP 473
+ P
Sbjct: 439 SMASP 443
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 9/174 (5%)
Query: 298 VKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVE---EKDIV 354
VKA +++AGG ++++T++W + E+ + + E EE V+ R E K +
Sbjct: 277 VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREE---VLNARRQAEGDISKMLQ 333
Query: 355 NLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEK 414
+P + A +KET+RLHP++ L R D + Y IP T V V+++A+GR P+ +
Sbjct: 334 MVPLLKASIKETLRLHPISVTL-QRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSS 392
Query: 415 PNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
P++F P R++ K D+ F L FG G R C G + + L ++L F
Sbjct: 393 PDKFDPTRWLSKDKDLI--HFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENF 444
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 274 KDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAG--------GTESSAVTVEWAISELI 325
+DM+DVL+ VK E G F+ D I G G +S+ T W + EL+
Sbjct: 223 RDMLDVLIA--------VKAET-GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM 273
Query: 326 KKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDC 385
+ + + I+ELD + G R V + +P ++ ++KET+RLHP L+ R A+ +
Sbjct: 274 RHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEF 332
Query: 386 NVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRR 445
V G+ I +G V S R P + P++F P R+ + + + +PFGAGR
Sbjct: 333 EVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRH 392
Query: 446 MCPGYSLGLKVIQASLANLLHGFAWKL---PGNMSNEELNM 483
C G + + I+A + LL + +++ P + N+ M
Sbjct: 393 RCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 274 KDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAG--------GTESSAVTVEWAISELI 325
+DM+DVL+ VK E G F+ D I G G +S+ T W + EL+
Sbjct: 223 RDMLDVLIA--------VKAET-GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM 273
Query: 326 KKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDC 385
+ + + I+ELD + G R V + +P ++ ++KET+RLHP L+ R A+ +
Sbjct: 274 RHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEF 332
Query: 386 NVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRR 445
V G+ I +G V S R P + P++F P R+ + + + +PFGAGR
Sbjct: 333 EVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRH 392
Query: 446 MCPGYSLGLKVIQASLANLLHGFAWKL---PGNMSNEELNM 483
C G + + I+A + LL + +++ P + N+ M
Sbjct: 393 RCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 289 LEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWV 348
L+ ++ +KA + +L AG +++A + + EL + P++ + +E
Sbjct: 269 LKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEH 328
Query: 349 EEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRH 408
+K LP + A +KET+RL+PV FL R D + Y IP GT V V ++++GR+
Sbjct: 329 PQKATTELPLLRAALKETLRLYPVGLFL-ERVVSSDLVLQNYHIPAGTLVQVFLYSLGRN 387
Query: 409 PSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPG 449
+L+ +P + P+R++ I G +F +PFG G R C G
Sbjct: 388 AALFPRPERYNPQRWL--DIRGSGRNFHHVPFGFGMRQCLG 426
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 274 KDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAG--------GTESSAVTVEWAISELI 325
+DM+DVL+ VK E G F+ D I G G +S+ T W + EL+
Sbjct: 223 RDMLDVLIA--------VKAET-GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM 273
Query: 326 KKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDC 385
+ + + I+ELD + G R V + +P ++ ++KET+RLHP L+ R A+ +
Sbjct: 274 RHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEF 332
Query: 386 NVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRR 445
V G+ I +G V S R P + P++F P R+ + + + +PFGAGR
Sbjct: 333 EVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRH 392
Query: 446 MCPGYSLGLKVIQASLANLLHGFAWKL---PGNMSNEELNM 483
C G + + I+A + LL + +++ P + N+ M
Sbjct: 393 RCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 274 KDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAG--------GTESSAVTVEWAISELI 325
+DM+DVL+ VK E G F+ D I G G +S+ T W + EL+
Sbjct: 223 RDMLDVLIA--------VKAET-GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELM 273
Query: 326 KKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDC 385
+ + + I+ELD + G R V + +P ++ ++KET+RLHP L+ R A+ +
Sbjct: 274 RHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEF 332
Query: 386 NVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRR 445
V G+ I +G V S R P + P++F P R+ + + + +PFGAGR
Sbjct: 333 EVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRH 392
Query: 446 MCPGYSLGLKVIQASLANLLHGFAWKL---PGNMSNEELNM 483
C G + + I+A + LL + +++ P + N+ M
Sbjct: 393 RCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKM 433
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 308 GGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETM 367
G E+SA + + + EL ++PEI + E+D VIG +R+++ +D+ L ++ ++KE++
Sbjct: 254 AGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESL 313
Query: 368 RLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS 427
RL+P A + R E+ + G +P T +L S + +GR + +E P F P+RF +
Sbjct: 314 RLYPPA-WGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGA 372
Query: 428 IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKL-PGN 475
+ F PF G R C G ++ +A LL ++L PG
Sbjct: 373 PKPR---FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQ 418
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 300 AFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFI 359
A +L E++A ++ W + L + P+ + ++E+ V+ + +D+ N+P++
Sbjct: 286 AAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYL 345
Query: 360 DAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFY 419
A +KE+MRL P PF R + + Y +PKGT + ++ +G +E ++F
Sbjct: 346 KACLKESMRLTPSVPFTT-RTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFR 404
Query: 420 PERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
PER++ K + K + F LPFG G+RMC G L + +L ++ +
Sbjct: 405 PERWLQK--EKKINPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKY 451
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 37 PGPKPWPIIGNLHLI---GSLP--HRSVHALSEKYGPIMQLK 73
PGP WP++G+L I G L H ++ +KYG I ++K
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMK 68
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 264 RRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
R+KG V D +L +L D K+ +KA +++AGG +++++T++W + E
Sbjct: 249 RQKGS---VHHDYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYE 301
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNL----PFIDAIVKETMRLHPVAPFLVPR 379
+ + ++ + E + R + D+ + P + A +KET+RLHP++ L R
Sbjct: 302 MARNLKVQDMLRAE----VLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTL-QR 356
Query: 380 AAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLP 439
D + Y IP T V V+++A+GR P+ + P F P R++ K ++ F L
Sbjct: 357 YLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY--FRNLG 414
Query: 440 FGAGRRMCPGYSLGLKVIQASLANLLHGF 468
FG G R C G + + L N+L F
Sbjct: 415 FGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 18/209 (8%)
Query: 264 RRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISE 323
R+KG V D +L +L D K+ +KA +++AGG +++++T++W + E
Sbjct: 246 RQKGS---VHHDYRGILYRLLGDS----KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYE 298
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNL----PFIDAIVKETMRLHPVAPFLVPR 379
+ + ++ + E + R + D+ + P + A +KET+RLHP++ L R
Sbjct: 299 MARNLKVQDMLRAE----VLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTL-QR 353
Query: 380 AAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLP 439
D + Y IP T V V+++A+GR P+ + P F P R++ K ++ F L
Sbjct: 354 YLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY--FRNLG 411
Query: 440 FGAGRRMCPGYSLGLKVIQASLANLLHGF 468
FG G R C G + + L N+L F
Sbjct: 412 FGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 32/305 (10%)
Query: 167 GKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVT-PQEFKAMLDELFLLNGVLDIG 225
GK + +++ V +R +L Y D++ E V F+ M + + G L
Sbjct: 149 GKTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATVFRGMYRRMVVPLGPL--- 205
Query: 226 DSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLAD 285
L L N + ALA L ++DE A R+ D++ LL+ D
Sbjct: 206 ------YRLPLPANRRFNDALAD-----LHLLVDEIIAERRA-SGQKPDDLLTALLEAKD 253
Query: 286 D---PSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVI 342
D P E +I V T G+E+ A T+ W + L PE ++ +E++ V
Sbjct: 254 DNGDPIGEQEIHDQVVAILTP-----GSETIASTIMWLLQALADHPEHADRIRDEVEAVT 308
Query: 343 GKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSV 402
G R V +D+ L ++ E MRL P L RA E + GY IP G ++ S
Sbjct: 309 GG-RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAE-SELGGYRIPAGADIIYSP 366
Query: 403 WAIGRHPSLWEKPNEFYPERFI-GKSIDVKGHDFELLPFGAGRRMCPG--YSLG-LKVIQ 458
+AI R P ++ EF P+R++ ++ +V + + PF AG+R CP +S+ L +I
Sbjct: 367 YAIQRDPKSYDDNLEFDPDRWLPERAANVP--KYAMKPFSAGKRKCPSDHFSMAQLTLIT 424
Query: 459 ASLAN 463
A+LA
Sbjct: 425 AALAT 429
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 116/240 (48%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R CPG L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACPGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 440
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 293 IERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKD 352
+ R V +++ ++ +V++ + + + K P + E I+E+ VIG ER ++ D
Sbjct: 291 LTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDD 349
Query: 353 IVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLW 412
I L ++ + E+MR PV LV R A ED + GY + KGT +++++ + R +
Sbjct: 350 IQKLKVMENFIYESMRYQPVVD-LVMRKALEDDVIDGYPVKKGTNIILNIGRMHR-LEFF 407
Query: 413 EKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKL 472
KPNEF E F + +V F+ PFG G R C G + + +++A L LL F K
Sbjct: 408 PKPNEFTLENF---AKNVPYRYFQ--PFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKT 462
Query: 473 PGNMSNEELNMEEIFGLS---TPRKFPLEVLAHPRLS 506
E ++++I LS K LE++ PR S
Sbjct: 463 LQGQCVE--SIQKIHDLSLHPDETKNMLEMIFTPRNS 497
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 13/246 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLH-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +R+ P
Sbjct: 269 TTSGLLTFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRIWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL++EE L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIEETLTL 440
Query: 490 STPRKF 495
P+ F
Sbjct: 441 K-PKGF 445
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACEGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
S++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 STSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLLL 440
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 440
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ +A G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 ATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSHKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 440
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 440
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
S++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 STSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLLL 439
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 12/236 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
S++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 STSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEE 485
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKE 435
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 213 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 270
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 271 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 330 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 387
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 388 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 442
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ +A G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 ATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
P A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TGPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLVL 440
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 ATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 ATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ +A G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 ATSGLLSFALYFLVKNPHELQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 ATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ +A G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLAAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 ATSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
P A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TGPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLVL 439
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 216 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLH-GKDPETGEPLDDENIRYQIVTFLIAGHE 273
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + + + L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 274 TTSGLLSFTLYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 332
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 333 TAPAF-SLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 390
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 391 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 445
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 278 DVLLQLAD--DPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAI 335
D+L Q+ + DP ++ + + G E+++ + +A+ L+K P + +K
Sbjct: 232 DLLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVA 291
Query: 336 EELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAG-YDIPK 394
EE RV+ + K + L ++ ++ E +RL P AP A+ED + G Y + K
Sbjct: 292 EEATRVL-VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEK 349
Query: 395 GTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
G V+V + + R ++W + EF PERF S + H F+ PFG G+R C G
Sbjct: 350 GDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSA-IPQHAFK--PFGNGQRACIGQQFA 406
Query: 454 LKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
L L +L F ++ + +N EL+++E L
Sbjct: 407 LHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGKQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 NTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLICGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIQGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 11/188 (5%)
Query: 304 DLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIV 363
+LIAG +S + + +A+ L+K P + +KA EE RV+ + K + L ++ ++
Sbjct: 261 ELIAGHETTSGL-LSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVL 318
Query: 364 KETMRLHPVAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPE 421
E +RL P AP A+ED + G Y + KG ++V + + R ++W + EF PE
Sbjct: 319 NEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 422 RFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEEL 481
RF S + H F+ PFG G+R C G L L +L F ++ + +N EL
Sbjct: 378 RFENPSA-IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYEL 431
Query: 482 NMEEIFGL 489
+++E L
Sbjct: 432 DIKETLTL 439
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIKGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIHGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 211 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 268
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 269 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 327
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 328 TAPPF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 385
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 386 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 440
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIMGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 213 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 270
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 271 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
+P A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 330 TSPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 387
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 388 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 442
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIEGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ P+G G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PYGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 213 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 270
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 271 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 329
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
P A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 330 TVPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 387
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ PFG G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 388 IPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 442
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 115/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ P+G G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PWGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ P G G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PHGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 12/240 (5%)
Query: 252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
K + ++D+ A RK + D++ +L DP ++ ++ + G E
Sbjct: 210 KVMNDLVDKIIADRKA-SGEQSDDLLTHMLN-GKDPETGEPLDDENIRYQIITFLIAGHE 267
Query: 312 SSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
+++ + +A+ L+K P + +KA EE RV+ + K + L ++ ++ E +RL P
Sbjct: 268 TTSGLLSFALYFLVKNPHVLQKAAEEAARVL-VDPVPSYKQVKQLKYVGMVLNEALRLWP 326
Query: 372 VAPFLVPRAAREDCNVAG-YDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSID 429
AP A+ED + G Y + KG ++V + + R ++W + EF PERF S
Sbjct: 327 TAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSA- 384
Query: 430 VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL 489
+ H F+ P G G+R C G L L +L F ++ + +N EL+++E L
Sbjct: 385 IPQHAFK--PAGNGQRACIGQQFALHEATLVLGMMLKHFDFE---DHTNYELDIKETLTL 439
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 305 LIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKD-IVNLPFIDAIV 363
L+ G +S+ T W L + + +K E V G+ D + +L +D +
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 364 KETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERF 423
KET+RL P ++ R AR VAGY IP G +V VS R W + +F P+R+
Sbjct: 320 KETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRY 378
Query: 424 IGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKL 472
+ + G F +PFGAGR C G + I+ + +L + + L
Sbjct: 379 LQDN-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDL 426
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 360 DAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFY 419
+ V+E R +P PFL ++D + KGT VL+ ++ P LW+ P+EF
Sbjct: 277 EMFVQEVRRYYPFGPFLGA-LVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFR 335
Query: 420 PERFIGKSIDVKGHDFELLPFGAGR----RMCPGYSLGLKVIQASLANLLHGFAWKLP 473
PERF + ++ F+++P G G CPG + ++V++ASL L+H + +P
Sbjct: 336 PERFAEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 5/203 (2%)
Query: 274 KDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEK 333
+D + +LL DD + + + +K L+ G E+ + L + +I E+
Sbjct: 222 EDALGILLAARDDNNQPLSLPE--LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRER 279
Query: 334 AIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIP 393
+E +++ + E + +P++D +++E +RL P R +DC G+ P
Sbjct: 280 VRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVLRLIPPVGGGF-RELIQDCQFQGFHFP 337
Query: 394 KGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
KG V + P L+ P +F PERF F +PFG G R C G
Sbjct: 338 KGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFA 397
Query: 454 LKVIQASLANLLHGFAWK-LPGN 475
++ L+ F W LPG
Sbjct: 398 RLEMKLFATRLIQQFDWTLLPGQ 420
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 261 HNARRKGVENY---------VAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
HNAR K E+ +++ + + L D S +E KA T ++ ++
Sbjct: 215 HNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLE----KAKTHLVVLWASQ 270
Query: 312 SSAVTVE-WAISELIKKPEIFEKAIEELDRVI----------GKERWVEEKDIVNLPFID 360
++ + W++ ++I+ PE + A EE+ R + G + + ++ +LP +D
Sbjct: 271 ANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNV----AGYDIPKGTRVLVSVWAIGRHPSLWEKPN 416
+I+KE++RL + L R A+ED + Y+I K + + + P ++ P
Sbjct: 331 SIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL 388
Query: 417 EFYPERFIGKSIDVKGH--------DFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
F +R++ ++ K + +PFG+G +CPG + I+ L +L F
Sbjct: 389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF 448
Query: 469 AWKL 472
+L
Sbjct: 449 ELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 38/244 (15%)
Query: 261 HNARRKGVENY---------VAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTE 311
HNAR K E+ +++ + + L D S +E KA T ++ ++
Sbjct: 215 HNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTFDDLE----KAKTHLVVLWASQ 270
Query: 312 SSAVTVE-WAISELIKKPEIFEKAIEELDRVI----------GKERWVEEKDIVNLPFID 360
++ + W++ ++I+ PE + A EE+ R + G + + ++ +LP +D
Sbjct: 271 ANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLD 330
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNV----AGYDIPKGTRVLVSVWAIGRHPSLWEKPN 416
+I+KE++RL + L R A+ED + Y+I K + + + P ++ P
Sbjct: 331 SIIKESLRLSSAS--LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPL 388
Query: 417 EFYPERFIGKSIDVKGH--------DFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
F +R++ ++ K + +PFG+G +CPG + I+ L +L F
Sbjct: 389 TFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYF 448
Query: 469 AWKL 472
+L
Sbjct: 449 ELEL 452
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 273 YAELFVQEVRRFYPFGPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 253 FLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTES 312
L VLDE RR +EN D++ +LLQ D S ++ + A +IA GT++
Sbjct: 208 LLHGVLDER--RRNPLEN----DVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDT 258
Query: 313 SAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPV 372
+ + +A+ L++ PE E E + + E +R +
Sbjct: 259 TIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFENI 300
Query: 373 APFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKG 432
R AR+D G I KG V + + + R +++ +P+ F DV+
Sbjct: 301 LRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRR 350
Query: 433 HDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
L +G G +CPG SL + ++ + F
Sbjct: 351 DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 87/216 (40%), Gaps = 37/216 (17%)
Query: 253 FLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTES 312
L VLDE RR +EN D++ +LLQ D S ++ + A +IA GT++
Sbjct: 208 LLHGVLDER--RRNPLEN----DVLTMLLQAEADGS---RLSTKELVALVGAIIAAGTDT 258
Query: 313 SAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPV 372
+ + +A+ L++ PE E E + + E +R +
Sbjct: 259 TIYLIAFAVLNLLRSPEALELVKAEPG------------------LMRNALDEVLRFDNI 300
Query: 373 APFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKG 432
R AR+D G I KG V + + + R +++ +P+ F DV+
Sbjct: 301 LRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVF----------DVRR 350
Query: 433 HDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
L +G G +CPG SL + ++ + F
Sbjct: 351 DTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 273 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ + V+E R +P P +V RA+ +D G P+G +V++ ++ + W P E
Sbjct: 265 YAELFVQEVRRFYPFFPAVVARAS-QDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRM----CPGYSLGLKVIQASLANLLHGFAWKLP 473
F PERF D F +P G G CPG + L +++ + L++ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 104/250 (41%), Gaps = 17/250 (6%)
Query: 228 IPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDP 287
+PW+ L L + + A A+ L+ +L E R+ E + D+L L
Sbjct: 187 LPWILKLPLPQSYRCRDARAE-----LQDILSEIIIAREKEEAQKDTNTSDLLAGLLGAV 241
Query: 288 SLE-VKIERHGVKAFTQDLIAGGTESSAVTVEWAISELI--KKPEIFEKAIEELDRVIGK 344
+ ++ +H V + G +S +T W++ L+ + K +E+D +
Sbjct: 242 YRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQ 301
Query: 345 ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWA 404
+ + + +PF + +E++R P L+ R + V Y +P+G + S
Sbjct: 302 LNY--DNVMEEMPFAEQCARESIRRDPPLVMLM-RKVLKPVQVGKYVVPEGDIIACSPLL 358
Query: 405 IGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANL 464
+ + P E+ PER ++K D FGAG C G GL ++ LA +
Sbjct: 359 SHQDEEAFPNPREWNPER------NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATV 412
Query: 465 LHGFAWKLPG 474
L + ++L G
Sbjct: 413 LRDYDFELLG 422
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 265 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 324
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 325 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 379 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 471 KL 472
+L
Sbjct: 432 QL 433
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 252 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 311
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 312 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 365
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 366 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
Query: 471 KL 472
+L
Sbjct: 419 QL 420
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 253 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 312
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 313 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 366
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 367 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 419
Query: 471 KL 472
+L
Sbjct: 420 QL 421
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 265 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 324
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 325 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 378
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 379 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 431
Query: 471 KL 472
+L
Sbjct: 432 QL 433
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 252 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 311
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 312 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 365
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 366 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 418
Query: 471 KL 472
+L
Sbjct: 419 QL 420
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 18/182 (9%)
Query: 296 HGVKAFTQDLIAGGTESSAVTVEWAISEL-----IKKPEIFEKAIEELDRVIGKERWVEE 350
H V + G +S++T W++ L +K E K IEE + ++E
Sbjct: 251 HEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE 310
Query: 351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS 410
+PF + +E++R P L+ R D V Y +PKG + S
Sbjct: 311 -----MPFAERCARESIRRDPPLLMLM-RKVMADVKVGSYVVPKGDIIACSPLLSHHDEE 364
Query: 411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAW 470
+ +P + PER V+G + FGAG C G GL ++ LA + +
Sbjct: 365 AFPEPRRWDPER----DEKVEG---AFIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDF 417
Query: 471 KL 472
+L
Sbjct: 418 QL 419
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 18/248 (7%)
Query: 228 IPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDP 287
+PWL L L + + +A A+ K L ++ +N + + +L + D
Sbjct: 186 MPWLLRLPLPQSARCREARAE-LQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 244
Query: 288 SLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELI--KKPEIFEKAIEELDRVIGKE 345
+ ++ H V + G +S +T W++ L+ K + +K +E+D +
Sbjct: 245 T---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQL 301
Query: 346 RWVEEKDIVNLPFIDAIVKETMRLHPVAPFL-VPRAAREDCNVAGYDIPKGTRVLVSVWA 404
+ D +PF + V+E++R P P L V R + + V Y +PKG + S
Sbjct: 302 NYDNVMD--EMPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLL 357
Query: 405 IGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANL 464
+ P + PER D K D + FGAG C G L ++ LA
Sbjct: 358 SHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATA 410
Query: 465 LHGFAWKL 472
+ ++L
Sbjct: 411 FREYDFQL 418
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 18/248 (7%)
Query: 228 IPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDP 287
+PWL L L + + +A A+ K L ++ +N + + +L + D
Sbjct: 201 MPWLLRLPLPQSARCREARAE-LQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 259
Query: 288 SLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELI--KKPEIFEKAIEELDRVIGKE 345
+ ++ H V + G +S +T W++ L+ K + +K +E+D +
Sbjct: 260 T---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQL 316
Query: 346 RWVEEKDIVNLPFIDAIVKETMRLHPVAPFL-VPRAAREDCNVAGYDIPKGTRVLVSVWA 404
+ D +PF + V+E++R P P L V R + + V Y +PKG + S
Sbjct: 317 NYDNVMD--EMPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLL 372
Query: 405 IGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANL 464
+ P + PER D K D + FGAG C G L ++ LA
Sbjct: 373 SHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATA 425
Query: 465 LHGFAWKL 472
+ ++L
Sbjct: 426 FREYDFQL 433
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 18/248 (7%)
Query: 228 IPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDP 287
+PWL L L + + +A A+ K L ++ +N + + +L + D
Sbjct: 192 MPWLLRLPLPQSARCREARAE-LQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDG 250
Query: 288 SLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELI--KKPEIFEKAIEELDRVIGKE 345
+ ++ H V + G +S +T W++ L+ K + +K +E+D +
Sbjct: 251 T---RMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQL 307
Query: 346 RWVEEKDIVNLPFIDAIVKETMRLHPVAPFL-VPRAAREDCNVAGYDIPKGTRVLVSVWA 404
+ D +PF + V+E++R P P L V R + + V Y +PKG + S
Sbjct: 308 NYDNVMD--EMPFAERCVRESIRRDP--PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLL 363
Query: 405 IGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANL 464
+ P + PER D K D + FGAG C G L ++ LA
Sbjct: 364 SHHDEEAFPNPRLWDPER------DEKV-DGAFIGFGAGVHKCIGQKFALLQVKTILATA 416
Query: 465 LHGFAWKL 472
+ ++L
Sbjct: 417 FREYDFQL 424
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 58/218 (26%)
Query: 270 NYVAKDMVDVLLQLADDPSLEVKIERHGV-----------KAFTQD--------LIAGGT 310
NYV MV LL++ K + HG+ + T D LI GG
Sbjct: 138 NYVNNRMVSRLLEI-------FKSDSHGIINVLAGSSLKNRKLTMDEKIKYIMLLIIGGN 190
Query: 311 ESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLH 370
E++ + I + + P+I + A+ K R V+ET+R +
Sbjct: 191 ETTTNLIGNMIRVIDENPDIIDDAL--------KNR-------------SGFVEETLRYY 229
Query: 371 PVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDV 430
FL R A ED + I KG +V+V + + R + +++P+ F IG+
Sbjct: 230 SPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFK----IGRR--- 282
Query: 431 KGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+ H L FG G MC G L +L ++L+ F
Sbjct: 283 EMH----LAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 47/262 (17%)
Query: 232 GFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEV 291
G LD + KR AL KF ++L ++ R++ E + V+ + DD + E
Sbjct: 172 GHLDASLSQKRRAALGDKFSRYLLAMI--ARERKEPGEGMIGA----VVAEYGDDATDEE 225
Query: 292 KIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEK 351
++ F ++ G ++ + + + +++ PE ++D G E+ +
Sbjct: 226 ------LRGFCVQVMLAGDDNISGMIGLGVLAMLRHPE-------QIDAFRGDEQSAQRA 272
Query: 352 DIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSL 411
V E +R V PR ARED +AG +I KG V+ S+ A R P+L
Sbjct: 273 -----------VDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPAL 321
Query: 412 WEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF-AW 470
+ +DV + FG G C G +L ++ L F A
Sbjct: 322 APDVDR----------LDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPAL 371
Query: 471 KLPGNMSNEELNMEEIFGLSTP 492
+L + E F L+TP
Sbjct: 372 RLADPAQDTE------FRLTTP 387
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 19/155 (12%)
Query: 355 NLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEK 414
N I V+E +R + R A ED ++ G I +G +V + + A R PS++
Sbjct: 263 NPDLIGTAVEECLRYESPTQ-MTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTN 321
Query: 415 PNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
P+ F D+ L FG G +C G SL Q ++ LL ++P
Sbjct: 322 PDVF----------DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQ----RMPS 367
Query: 475 -NMSNEELNMEEIFGLSTPRKFPLEVLA---HPRL 505
N+++ E +FG + P+ A HP+
Sbjct: 368 LNLADFEWRYRPLFGFRALEELPVTFEASWSHPQF 402
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 305 LIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVK 364
L+ G E++ + LI+ PE + + + V G +V+
Sbjct: 240 LLVAGHETTVNAIALGALTLIQHPEQIDVLLRDPGAVSG------------------VVE 281
Query: 365 ETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI 424
E +R V+ +V R A+ED V G I G VLVS+ + R +E P+ F R
Sbjct: 282 ELLRFTSVSDHIV-RMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR-- 338
Query: 425 GKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
+ + H + FG G C LG + +A L L G ++PG
Sbjct: 339 ----NARHH----VGFGHGIHQC----LGQNLARAELEIALGGLFARIPG 376
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 107/263 (40%), Gaps = 53/263 (20%)
Query: 211 MLDELFLLNGVLDIGDS----IPWLGFLDLQG----NIKRMKALAKKFDKF--------- 253
+LDEL GV+D+ + +P DL G + R+K L +KF
Sbjct: 130 LLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARLPRLKVLFEKFFSTQTPPEEVVA 189
Query: 254 ----LEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGG 309
L ++ + A ++ D+ L+Q +++ E + + Q ++A G
Sbjct: 190 TLTELASIMTDTVAAKRAAPG---DDLTSALIQASENGDHLTDAE---IVSTLQLMVAAG 243
Query: 310 TESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRL 369
E++ + A+ L PE ++A+ + G+ W A+V+ET+R
Sbjct: 244 HETTISLIVNAVVNLSTHPE--QRALV----LSGEAEW------------SAVVEETLRF 285
Query: 370 HPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSID 429
++ R A ED V IP G ++VS A+GR E+ + +RF
Sbjct: 286 STPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRD----ERAHGPTADRFDLTRTS 341
Query: 430 VKGHDFELLPFGAGRRMCPGYSL 452
H + FG G +CPG +L
Sbjct: 342 GNRH----ISFGHGPHVCPGAAL 360
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYP 420
A+++ETMR P LV R A +D + + +PKG +L+ + A R P++ P+ F P
Sbjct: 291 AVIEETMRYDPPVQ-LVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 421 ERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLP 473
+R L FG G C G L ++A++A L A + P
Sbjct: 350 DR----------AQIRHLGFGKGAHFCLGAPLAR--LEATVA--LPALAARFP 388
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R P P R A ED V G IP GT V + R P ++ + F
Sbjct: 280 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF---- 335
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELN 482
I VK + + FG G P + LG + + L + A +L E+
Sbjct: 336 ----DITVK-REAPSIAFGGG----PHFCLGTALARLELTEAVAALATRLDPPQIAGEIT 386
Query: 483 MEEIFGLSTPRKFPL 497
G++ P PL
Sbjct: 387 WRHELGVAGPDALPL 401
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 319 WAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVP 378
W + L+ PE EE+ GK +EE+ N P D+++ ET+RL A L+
Sbjct: 275 WVMGYLLTHPEALRAVREEIQG--GKHLRLEERQ-KNTPVFDSVLWETLRLTAAA--LIT 329
Query: 379 RAARED-----CNVAGYDIPKGTRVLVSVW-AIGRHPSLWEKPNEFYPERFIGKSIDVKG 432
R +D N Y + +G R+ V + + P + ++P F +RF+ K
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 433 HDFE--------LLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
F+ +P+G +CPG + I+ + +L F
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRF 433
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 13/135 (9%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R P P R A ED V G IP GT V + R P ++ + F
Sbjct: 290 VEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRF---- 345
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELN 482
I VK + + FG G P + LG + + L + A +L E+
Sbjct: 346 ----DITVK-REAPSIAFGGG----PHFCLGTALARLELTEAVAALATRLDPPQIAGEIT 396
Query: 483 MEEIFGLSTPRKFPL 497
G++ P PL
Sbjct: 397 WRHELGVAGPDALPL 411
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 22/169 (13%)
Query: 298 VKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLP 357
+ A +++ TE + T+ I L+ PE +++ V+ V
Sbjct: 259 ILALILNVLLAATEPADKTLALMIYHLLNNPE-------QMNDVLADRSLVPRA------ 305
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
+ ET+R P L+PR +D V G +I K T V + A R P +E+P+
Sbjct: 306 -----IAETLRYKPPVQ-LIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDV 359
Query: 418 FYPER-FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLL 465
F R +G G L FG+G C G + I+ +AN++
Sbjct: 360 FNIHREDLGIKSAFSGAARH-LAFGSGIHNCVGTAFAKNEIEI-VANIV 406
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 359 IDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEF 418
I AIV+E +R P P + R + VAG IP V V + R + P+ F
Sbjct: 274 IPAIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 332
Query: 419 YPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSN 478
P R G + L FG G C G L + +L ++ F +L + +
Sbjct: 333 DPSRKSGGAAQ--------LSFGHGVHFCLGAPLARLENRVALEEIIARFG-RLTVDRDD 383
Query: 479 EELNMEEIFGLSTPRKFPLEVLAHPRLS 506
E L E L T R P+ + PR S
Sbjct: 384 ERLRHFEQIVLGT-RHLPVLAGSSPRQS 410
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 59/148 (39%), Gaps = 11/148 (7%)
Query: 359 IDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEF 418
I AIV+E +R P P + R + VAG IP V V + R + P+ F
Sbjct: 294 IPAIVEEVLRYRPPFPQM-QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRF 352
Query: 419 YPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSN 478
P R G + L FG G C G L + +L ++ F +L + +
Sbjct: 353 DPSRKSGGAAQ--------LSFGHGVHFCLGAPLARLENRVALEEIIARFG-RLTVDRDD 403
Query: 479 EELNMEEIFGLSTPRKFPLEVLAHPRLS 506
E L E L T R P+ + PR S
Sbjct: 404 ERLRHFEQIVLGT-RHLPVLAGSSPRQS 430
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 359 IDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEF 418
+D +V+E +R A V R D + G D+P GT V+ + A R P+ ++ P+ F
Sbjct: 287 VDTVVEEVLRWTSPA-MHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTF 345
Query: 419 YPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
P R + I FG G C G +L
Sbjct: 346 LPGRKPNRHI----------TFGHGMHHCLGSALA 370
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R PS + P+ F R
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR 335
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
D +GH L FG G C G L
Sbjct: 336 ------DTRGH----LSFGQGIHFCMGRPLA 356
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYP 420
A V+E MR P V R A ED + +DIP+G+RV+ + + R P+ + P+
Sbjct: 289 AAVEELMRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPD---- 343
Query: 421 ERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+DV + FG G C G +L + L LL G
Sbjct: 344 ------VLDVHRAAERQVGFGLGIHYCLGATLARAEAEIGLRALLDGI 385
>pdb|3CXV|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 A233g
Mutant From Mycobacterium Tuberculosis
Length = 396
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 35/170 (20%)
Query: 307 AGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKET 366
GG S+ + A+ LI++P++ E+ + + VEE +NL F D +
Sbjct: 232 GGGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAG---VEELLRINLSFADGL---- 284
Query: 367 MRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG- 425
PR A D V + KG VLV L E N F PE F
Sbjct: 285 -----------PRLATADIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNP 322
Query: 426 KSIDV-KGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
SI++ + + L FG G+ CPG +LG + Q + LL K+PG
Sbjct: 323 GSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3CXZ|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 R386l Mutant
From M. Tuberculosis
Length = 396
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 71/179 (39%), Gaps = 48/179 (26%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 259 LHEKPELIPAGVEELLRI-------------NLSFADGL---------------PRLATA 290
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L FG
Sbjct: 291 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAFG 339
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG---NMSNEELNMEEIFGLSTPRKFPL 497
G+ CPG +LG + Q + LL K+PG + ++L F L P + P+
Sbjct: 340 RGQHFCPGSALGRRHAQIGIEALLK----KMPGVDLAVPIDQLVWRTRFQLRIPERLPV 394
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 364 KETMRLHPVAPFLVPRAAREDCNVAGYD-IPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
+E +RL+P A L R E + G D +P+GT +++S + R + + F PER
Sbjct: 259 QEALRLYPPAWILTRRL--ERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPER 314
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGL 454
F+ + G F PFG G+R+C G L
Sbjct: 315 FLAERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R P + P+ F R
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
D +GH L FG G C G L + +L L F
Sbjct: 337 ------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R P + P+ F R
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
D +GH L FG G C G L + +L L F
Sbjct: 337 ------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R P + P+ F R
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 335
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
D +GH L FG G C G L + +L L F
Sbjct: 336 ------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R P + P+ F R
Sbjct: 278 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
D +GH L FG G C G L + +L L F
Sbjct: 337 ------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E +R + P R A E+ + G IP+ + VLV+ A R P + P+ F R
Sbjct: 277 VEEILR-YIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 335
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
D +GH L FG G C G L + +L L F
Sbjct: 336 ------DTRGH----LSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3CY0|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 S237a Mutant
From Mycobacterium Tuberculosis
Length = 396
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 71/185 (38%), Gaps = 50/185 (27%)
Query: 297 GVKAFTQDLIAGGTESSAVTVEWAISELIK-----KPEIFEKAIEELDRVIGKERWVEEK 351
GV F +IA G+ + + ++ KPE+ +EEL R+
Sbjct: 227 GVTFFGAGVIATGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRI---------- 276
Query: 352 DIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSL 411
NL F D + PR A D V + KG VLV L
Sbjct: 277 ---NLSFADGL---------------PRLATADIQVGDVLVRKGELVLV----------L 308
Query: 412 WEKPNEFYPERFIG-KSIDV-KGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFA 469
E N F PE F SI++ + + L FG G+ CPG +LG + Q + LL
Sbjct: 309 LEGAN-FDPEHFPNPGSIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLK--- 364
Query: 470 WKLPG 474
K+PG
Sbjct: 365 -KMPG 368
>pdb|4G1X|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4-(1h-1,2,4-Triazol-1-Yl)quinolin-6-Amine
pdb|4G2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp121 In
Complex With 4,4'-(1h-1,2,3-Triazole-1,5-Diyl)diphenol
Length = 395
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 45/153 (29%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 258 LHEKPELIPAGVEELLRI-------------NLSFADGL---------------PRLATA 289
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L FG
Sbjct: 290 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAFG 338
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
G+ CPG +LG + Q + LL K+PG
Sbjct: 339 RGQHFCPGSALGRRHAQIGIEALLK----KMPG 367
>pdb|3CY1|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 S279a
Mutant From M. Tuberculosis
Length = 396
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 45/153 (29%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 259 LHEKPELIPAGVEELLRI-------------NLAFADGL---------------PRLATA 290
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L FG
Sbjct: 291 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAFG 339
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
G+ CPG +LG + Q + LL K+PG
Sbjct: 340 RGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|1N40|A Chain A, Atomic Structure Of Cyp121, A Mycobacterial P450
pdb|1N4G|A Chain A, Structure Of Cyp121, A Mycobacterial P450, In Complex With
Iodopyrazole
pdb|2IJ5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|B Chain B, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|C Chain C, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|D Chain D, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|E Chain E, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ5|F Chain F, Crystal Structure Of Cytochrome P450 Cyp121, P212121 Space
Group
pdb|2IJ7|A Chain A, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|B Chain B, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|C Chain C, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|D Chain D, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|E Chain E, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|2IJ7|F Chain F, Structure Of Mycobacterium Tuberculosis Cyp121 In Complex
With The Antifungal Drug Fluconazole
pdb|3G5F|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|3G5H|A Chain A, Crystallographic Analysis Of Cytochrome P450 Cyp121
pdb|4G44|A Chain A, Structure Of P450 Cyp121 In Complex With Lead Compound
Mb286, 3-((1h- 1,2,4-Triazol-1-Yl)methyl)aniline
pdb|4G45|A Chain A, Structure Of Cytochrome Cyp121 In Complex With
2-Methylquinolin-6- Amine
pdb|4G46|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-Oxo-4,5,6,7- Tetrahydrobenzofuran-3-Carboxylate
pdb|4G47|A Chain A, Structure Of Cytochrome P450 Cyp121 In Complex With
4-(1h-1,2,4- Triazol-1-Yl)phenol
pdb|4G48|A Chain A, Structure Of Cyp121 In Complex With
4-(4-Phenoxy-1h-Pyrazol-3-Yl) Benzene-1,3-Diol
Length = 396
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 45/153 (29%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 259 LHEKPELIPAGVEELLRI-------------NLSFADGL---------------PRLATA 290
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L FG
Sbjct: 291 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAFG 339
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
G+ CPG +LG + Q + LL K+PG
Sbjct: 340 RGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 353 IVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV------AGYDIPKGTRVLVSVWAIG 406
I +P ++V E++R+ P P P+ + N A +++ KG +
Sbjct: 324 IEQMPLTKSVVYESLRIEPPVP---PQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFAT 380
Query: 407 RHPSLWEKPNEFYPERFIG 425
+ P ++++P E+ P+RF+G
Sbjct: 381 KDPKVFDRPEEYVPDRFVG 399
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 319 WAISELIKKPEIFEKAIEELDRV-------IGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
W + L+K PE EL+ + + + + +K + + P +D+++ E++RL
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 330
Query: 372 VAPFL----VPRAAREDCNVAGYDIPKGTRVLV-SVWAIGRHPSLWEKPNEFYPERFIGK 426
APF+ V A + +++ +G R+L+ + R P ++ P F RF+
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 427 SIDVKGHDFE--------LLPFGAGRRMCPGYSLGLKVI-QASLANLLHGFAWKLPGNMS 477
K ++ +P+GAG C G S + I Q L+H + ++
Sbjct: 391 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVE 450
Query: 478 NEELNMEEI-FGLSTPRKFPLEVLAHPRLSPH 508
E ++ FGL P +V R+ PH
Sbjct: 451 IPEFDLSRYGFGLMQPEH---DVPVRYRIRPH 479
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 319 WAISELIKKPEIFEKAIEELDRV-------IGKERWVEEKDIVNLPFIDAIVKETMRLHP 371
W + L+K PE EL+ + + + + +K + + P +D+++ E++RL
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRL-T 342
Query: 372 VAPFL----VPRAAREDCNVAGYDIPKGTRVLV-SVWAIGRHPSLWEKPNEFYPERFIGK 426
APF+ V A + +++ +G R+L+ + R P ++ P F RF+
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 427 SIDVKGHDFE--------LLPFGAGRRMCPGYSLGLKVIQ 458
K ++ +P+GAG C G S + I+
Sbjct: 403 DGSEKKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIK 442
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 301 FTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFID 360
+ L++ G +++ + A+ L + P+ F R + + F +
Sbjct: 244 LVRSLLSAGLDTTVNGIAAAVYCLARFPDEFA-------------RLRADPSLARNAFEE 290
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYP 420
A+ E+ PV F R D +AG I +G +VL+ + + R P W+ P+ +
Sbjct: 291 AVRFES----PVQTFF--RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDI 344
Query: 421 ERFIGKSIDVKGHDFELLPFGAGRRMCPGY---SLGLKVIQASLA 462
R GH + FG+G MC G L +V+ A+LA
Sbjct: 345 TR------KTSGH----VGFGSGVHMCVGQLVARLEGEVVLAALA 379
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 364 KETMRLHPVAPFLVPRAAREDCNVAGYD-IPKGTRVLVSVWAIGR-HPSLWEKPNEFYPE 421
+E +RL+P A L R E + G D +P GT +++S + R H + F PE
Sbjct: 259 QEALRLYPPAWILTRRL--ERPLLLGEDRLPPGTTLVLSPYVTQRLH---FPDGEAFRPE 313
Query: 422 RFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGL 454
RF+ + G F PFG G+R+C G L
Sbjct: 314 RFLEERGTPSGRYF---PFGLGQRLCLGRDFAL 343
>pdb|3CXX|A Chain A, Crystal Structure Of Cytochrome P450 Cyp121 F338h From M.
Tuberculosis
Length = 396
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 60/153 (39%), Gaps = 45/153 (29%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 259 LHEKPELIPAGVEELLRI-------------NLSFADGL---------------PRLATA 290
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L G
Sbjct: 291 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAHG 339
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
G+ CPG +LG + Q + LL K+PG
Sbjct: 340 RGQHFCPGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
ID+ +E +R + PR A D +AG DI G + S+ A R P
Sbjct: 291 LIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP-------- 342
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
G D+ + FG G C G L ++ +L ++ F
Sbjct: 343 -------GDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 386
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 15/111 (13%)
Query: 358 FIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNE 417
ID+ +E +R + PR A D +AG DI G + S+ A R P
Sbjct: 258 LIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNRAP-------- 309
Query: 418 FYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
G D+ + FG G C G L ++ +L ++ F
Sbjct: 310 -------GDRFDITREKATHMAFGHGIHHCIGAPLARLQLRVALPAVVGRF 353
>pdb|3CXY|A Chain A, Crystal Structure Of The Cytochrome P450 Cyp121 P346l
Mutant From M. Tuberculosis
Length = 396
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 60/153 (39%), Gaps = 45/153 (29%)
Query: 324 LIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAARE 383
L +KPE+ +EEL R+ NL F D + PR A
Sbjct: 259 LHEKPELIPAGVEELLRI-------------NLSFADGL---------------PRLATA 290
Query: 384 DCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIG-KSIDV-KGHDFELLPFG 441
D V + KG VLV L E N F PE F SI++ + + L FG
Sbjct: 291 DIQVGDVLVRKGELVLV----------LLEGAN-FDPEHFPNPGSIELDRPNPTSHLAFG 339
Query: 442 AGRRMCPGYSLGLKVIQASLANLLHGFAWKLPG 474
G+ C G +LG + Q + LL K+PG
Sbjct: 340 RGQHFCLGSALGRRHAQIGIEALLK----KMPG 368
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 63/178 (35%), Gaps = 44/178 (24%)
Query: 323 ELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAR 382
+L+ +PE+ A+EEL RWV P PR A
Sbjct: 279 QLLDRPELIPSAVEELT------RWV--------PLGVGTA-------------APRYAV 311
Query: 383 EDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGA 442
ED + G I G VL S A R +P+ IDV + L FG
Sbjct: 312 EDVTLRGVTIRAGEPVLASTGAANRD-------QAQFPD---ADRIDVDRTPNQHLGFGH 361
Query: 443 GRRMCPGYSLGLKVIQASLANLLHGFAWKLPG---NMSNEELNMEEIFGLSTPRKFPL 497
G C G L +Q +L LL +LPG + +L E L P + P+
Sbjct: 362 GVHHCLGAPLARVELQVALEVLLQ----RLPGIRLGIPETQLRWSEGMLLRGPLELPV 415
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 353 IVNLPFIDAIVKETMRLHPVAPFLVPRAARE---DCNVAGYDIPKGTRVLVSVWAIGRHP 409
I + ++V E +R P RA ++ + + A + + G + R P
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400
Query: 410 SLWEKPNEFYPERFIGK 426
++++ +EF PERF+G+
Sbjct: 401 KIFDRADEFVPERFVGE 417
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 361 AIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYP 420
A V E +R+ VA + R A ED ++G +P V+ + P ++ P
Sbjct: 284 AAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDP----- 338
Query: 421 ERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLL 465
+ +D D + FG G C G L ++ +L LL
Sbjct: 339 -----ERVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLL 378
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Query: 353 IVNLPFIDAIVKETMRLHPVAPFLVPRAARE---DCNVAGYDIPKGTRVLVSVWAIGRHP 409
I + ++V E +R P RA ++ + + A + + G + R P
Sbjct: 341 IEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDP 400
Query: 410 SLWEKPNEFYPERFIGK 426
++++ +EF PERF+G+
Sbjct: 401 KIFDRADEFVPERFVGE 417
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 30/150 (20%)
Query: 305 LIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVK 364
LI GG +++ ++ + L K P+ F K N ++ +V
Sbjct: 262 LIVGGNDTTRNSMTGGVLALHKNPDQFAKLK------------------ANPALVETMVP 303
Query: 365 ETMRLH-PVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERF 423
E +R P+A + R A D + G I KG +V++ ++ R + ++P EF +R
Sbjct: 304 EIIRWQTPLAH--MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRP 361
Query: 424 IGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
+ + L FG G C G L
Sbjct: 362 RPR---------QHLSFGFGIHRCVGNRLA 382
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 354 VNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWE 413
++ +D V+E +R R E ++ G IP G VLV + R P +
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 414 KPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
P+ F R D GH L FG G C G L
Sbjct: 351 DPHRFDIRR------DTAGH----LAFGHGIHFCIGAPLA 380
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 354 VNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWE 413
++ +D V+E +R R E ++ G IP G VLV + R P +
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 414 KPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
P+ F R D GH L FG G C G L
Sbjct: 351 DPHRFDIRR------DTAGH----LAFGHGIHFCIGAPLA 380
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 354 VNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWE 413
++ +D V+E +R R E ++ G IP G VLV + R P +
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 414 KPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLG 453
P+ F R D GH L FG G C G L
Sbjct: 351 DPHRFDIRR------DTAGH----LAFGHGIHFCIGAPLA 380
>pdb|1F25|A Chain A, Crystal Structure Of No Complex Of Thr243asn Mutants Of
Cytochrome P450nor
Length = 402
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1CL6|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Its Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F24|A Chain A, Crystal Structure Of No Complex Of Thr243ala Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1F26|A Chain A, Crystal Structure Of No Complex Of Thr243val Mutants Of
Cytochrome P450nor
Length = 402
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1JFB|A Chain A, X-Ray Structure Of Nitric Oxide Reductase (Cytochrome
P450nor) In The Ferric Resting State At Atomic
Resolution
pdb|1JFC|A Chain A, X-ray Structure Of Nitric Oxide Reductase (cytochrome
P450nor) In The Ferrous Co State At Atomic Resolution
Length = 404
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 277 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 332
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 333 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 374
>pdb|1ULW|A Chain A, Crystal Structure Of P450nor Ser73gly/ser75gly Mutant
Length = 402
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHE|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
pdb|1GEI|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GED|A Chain A, A Positive Charge Route For The Access Of Nadh To Heme
Formed In The Distal Heme Pocket Of Cytochrome P450nor
pdb|1GEJ|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum
pdb|2ROM|A Chain A, Crystal Structure Of Nitric Reductase From Denitrifying
Fungus Fusarium Oxysporum Complex With Carbon Monoxide
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 331
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 332 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1XQD|A Chain A, Crystal Structure Of P450nor Complexed With 3-
Pyridinealdehyde Adenine Dinucleotide
Length = 403
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + + R A+ED + + ++ S + R ++E P+EF
Sbjct: 276 VEELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 331
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 332 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMJ|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|1EHF|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + R A+ED + + ++ S + R ++E P+EF
Sbjct: 276 VEELCRYHTATALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 331
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 332 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1RIQ|A Chain A, The Crystal Structure Of The Catalytic Fragment Of The
Alanyl-Trna Synthetase
Length = 465
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 267 GVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIK 326
G+EN VD+++ + +P E+++ R VK I G E + A E I+
Sbjct: 311 GIENPFLYKGVDLVVDIXKEPYPELELSREFVKG-----IVKGEEKRFIKTLKAGXEYIQ 365
Query: 327 KPEIFEKAIEELDRVIGKERWVEEKDIVNLP--FIDAIVKE 365
E+ +KA+EE + + + D P ID I +E
Sbjct: 366 --EVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIARE 404
>pdb|1EHG|A Chain A, Crystal Structures Of Cytochrome P450nor And Its Mutants
(Ser286 Val, Thr) In The Ferric Resting State At
Cryogenic Temperature: A Comparative Analysis With
Monooxygenase Cytochrome P450s
Length = 403
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + R A+ED + + ++ S + R ++E P+EF
Sbjct: 276 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 331
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 332 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 373
>pdb|1CMN|A Chain A, Crystal Structures Of Ferric-No Complexes Of Fungal Nitric
Oxide Reductase And Their Ser286 Mutants At Cryogenic
Temperature
Length = 402
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)
Query: 363 VKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPER 422
V+E R H + R A+ED + + ++ S + R ++E P+EF
Sbjct: 275 VEELCRYHTAVALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEF---- 330
Query: 423 FIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGF 468
+++ K + L FG G C L + + L F
Sbjct: 331 ----NMNRKWPPQDPLGFGFGDHRCIAEHLAKAELTTVFSTLYQKF 372
>pdb|3HTZ|A Chain A, Crystal Structure Of The Catalytic Fragment Of Alanyl-Trna
Synthetase In Complex With L-Serine: Re-Refined
Length = 464
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 267 GVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIK 326
G+EN VD+++ + +P E+++ R VK I G E + A E I+
Sbjct: 310 GIENPFLYKGVDLVVDIMKEPYPELELSREFVKG-----IVKGEEKRFIKTLKAGMEYIQ 364
Query: 327 KPEIFEKAIEELDRVIGKERWVEEKDIVNLP--FIDAIVKE 365
E+ +KA+EE + + + D P ID I +E
Sbjct: 365 --EVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIARE 403
>pdb|1YFR|A Chain A, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With Atp And Magnesium
pdb|1YFR|B Chain B, Crystal Structure Of Alanyl-Trna Synthetase In Complex
With Atp And Magnesium
pdb|1YFS|A Chain A, The Crystal Structure Of Alanyl-Trna Synthetase In Complex
With L-Alanine
pdb|1YFS|B Chain B, The Crystal Structure Of Alanyl-Trna Synthetase In Complex
With L-Alanine
pdb|1YFT|A Chain A, The Crystal Structure Of The Catalytic Fragment Of Alanyl-
Trna Synthetase In Complex Wtih Glycine
pdb|1YGB|A Chain A, Crystal Structure Of The Catalytic Fragment Of Alanyl-Trna
Synthetase In Complex With L-Serine
Length = 465
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 267 GVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIK 326
G+EN VD+++ + +P E+++ R VK I G E + A E I+
Sbjct: 311 GIENPFLYKGVDLVVDIMKEPYPELELSREFVKG-----IVKGEEKRFIKTLKAGMEYIQ 365
Query: 327 KPEIFEKAIEELDRVIGKERWVEEKDIVNLP--FIDAIVKE 365
E+ +KA+EE + + + D P ID I +E
Sbjct: 366 --EVIQKALEEGRKTLSGKEVFTAYDTYGFPVDLIDEIARE 404
>pdb|3H0G|C Chain C, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|O Chain O, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 297
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 453 GLKVIQASLANLLHGFAWKLPGNMSNEELNMEE 485
GL+++Q LA L+ + P +S ELNMEE
Sbjct: 248 GLRILQEKLAVLVRDLDEEQPTQLSANELNMEE 280
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,923,145
Number of Sequences: 62578
Number of extensions: 605877
Number of successful extensions: 1771
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1422
Number of HSP's gapped (non-prelim): 202
length of query: 512
length of database: 14,973,337
effective HSP length: 103
effective length of query: 409
effective length of database: 8,527,803
effective search space: 3487871427
effective search space used: 3487871427
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)