Query         010388
Match_columns 512
No_of_seqs    189 out of 1969
Neff          11.3
Searched_HMMs 46136
Date          Thu Mar 28 23:57:05 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010388.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010388hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.7E-84 3.6E-89  616.6  47.3  468   24-505    16-488 (489)
  2 PLN03112 cytochrome P450 famil 100.0 3.2E-80 6.9E-85  611.9  50.0  482   28-511    26-514 (514)
  3 PLN02183 ferulate 5-hydroxylas 100.0 2.9E-80 6.3E-85  610.7  48.3  470   26-505    28-512 (516)
  4 KOG0158 Cytochrome P450 CYP3/C 100.0 7.4E-81 1.6E-85  581.7  41.2  459   30-505    27-499 (499)
  5 PLN03234 cytochrome P450 83B1; 100.0 6.1E-80 1.3E-84  608.2  48.8  482   16-504    10-498 (499)
  6 PLN02687 flavonoid 3'-monooxyg 100.0 9.2E-80   2E-84  607.3  48.3  474   33-510    33-514 (517)
  7 PLN00110 flavonoid 3',5'-hydro 100.0 4.6E-79 9.9E-84  598.4  49.7  472   30-511    27-503 (504)
  8 PLN02971 tryptophan N-hydroxyl 100.0 3.4E-79 7.4E-84  604.8  48.6  475   32-510    55-539 (543)
  9 PLN02966 cytochrome P450 83A1  100.0 9.5E-78 2.1E-82  591.4  47.0  470   29-507    24-500 (502)
 10 PTZ00404 cytochrome P450; Prov 100.0 3.8E-77 8.2E-82  585.8  46.7  473   12-504     7-482 (482)
 11 PLN02394 trans-cinnamate 4-mon 100.0 5.1E-77 1.1E-81  588.0  47.2  476   19-505    15-502 (503)
 12 PLN00168 Cytochrome P450; Prov 100.0 4.8E-77   1E-81  588.2  46.2  466   31-506    32-518 (519)
 13 KOG0157 Cytochrome P450 CYP4/C 100.0 1.1E-76 2.5E-81  576.1  34.9  453   32-506    33-497 (497)
 14 KOG0159 Cytochrome P450 CYP11/ 100.0   4E-76 8.7E-81  536.1  34.7  455   32-505    48-518 (519)
 15 PLN02655 ent-kaurene oxidase   100.0 6.1E-75 1.3E-79  566.1  43.2  457   36-506     1-465 (466)
 16 PLN02290 cytokinin trans-hydro 100.0   4E-75 8.7E-80  575.9  41.9  452   32-506    40-516 (516)
 17 PLN02500 cytochrome P450 90B1  100.0   2E-74 4.4E-79  566.6  40.8  465    2-503     4-488 (490)
 18 PLN03018 homomethionine N-hydr 100.0   7E-73 1.5E-77  555.3  50.9  468   34-506    40-525 (534)
 19 PLN02774 brassinosteroid-6-oxi 100.0 1.7E-73 3.7E-78  555.4  40.0  453    9-503     6-462 (463)
 20 PLN03195 fatty acid omega-hydr 100.0 5.6E-73 1.2E-77  560.1  39.2  454   34-505    30-516 (516)
 21 PF00067 p450:  Cytochrome P450 100.0   1E-73 2.2E-78  564.8  29.3  454   36-501     1-463 (463)
 22 PLN02169 fatty acid (omega-1)- 100.0 5.3E-72 1.1E-76  547.3  40.9  452   31-504    28-499 (500)
 23 PLN02738 carotene beta-ring hy 100.0 7.1E-72 1.5E-76  553.5  40.9  443   46-508   143-598 (633)
 24 PLN02196 abscisic acid 8'-hydr 100.0 5.2E-72 1.1E-76  544.5  39.2  427   31-504    32-462 (463)
 25 KOG0684 Cytochrome P450 [Secon 100.0 5.7E-72 1.2E-76  495.8  34.2  444   34-505    31-485 (486)
 26 PLN02302 ent-kaurenoic acid ox 100.0 1.5E-70 3.3E-75  542.0  44.9  439   31-506    39-489 (490)
 27 PLN03141 3-epi-6-deoxocathaste 100.0 2.5E-70 5.4E-75  532.1  39.8  436   30-506     3-451 (452)
 28 PLN02987 Cytochrome P450, fami 100.0 2.9E-69 6.4E-74  522.8  43.0  445   20-505    16-469 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.1E-69 2.4E-74  531.3  38.4  452   34-508    12-485 (489)
 30 PLN02426 cytochrome P450, fami 100.0 8.3E-68 1.8E-72  516.8  40.8  439   42-505    49-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.7E-60 3.6E-65  457.7  28.3  407   33-475    16-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.7E-55 3.7E-60  418.6  33.2  382   55-504    24-410 (411)
 33 PF12508 DUF3714:  Protein of u  76.5    0.97 2.1E-05   38.0   0.4   44  355-400    51-94  (200)
 34 PF12554 MOZART1:  Mitotic-spin  65.4      23 0.00051   21.9   4.5   44  296-339     5-48  (48)
 35 PF08492 SRP72:  SRP72 RNA-bind  58.8     7.1 0.00015   25.4   1.6    7  419-425    44-50  (59)
 36 PRK06789 flagellar motor switc  56.7      14 0.00031   25.3   2.8   40  362-401    21-62  (74)
 37 PF01102 Glycophorin_A:  Glycop  51.8      23 0.00049   27.2   3.5   18   17-34     79-96  (122)
 38 TIGR03779 Bac_Flav_CT_M Bacter  50.7     4.9 0.00011   38.0  -0.1   44  356-401   255-298 (410)
 39 PF05952 ComX:  Bacillus compet  50.3      16 0.00035   23.5   2.2   24  320-343     5-28  (57)
 40 KOG3653 Transforming growth fa  49.9      58  0.0013   31.6   6.5   46   54-99    210-256 (534)
 41 PF09201 SRX:  SRX;  InterPro:   44.2      21 0.00046   27.6   2.4   23  445-467    18-40  (148)
 42 PHA03049 IMV membrane protein;  41.7      67  0.0015   21.3   3.9   28   11-38      8-35  (68)
 43 PF11138 DUF2911:  Protein of u  40.9      36 0.00079   27.1   3.3   39  382-421    53-98  (145)
 44 PHA02902 putative IMV membrane  39.1 1.1E+02  0.0024   20.1   6.6   21    9-29      7-27  (70)
 45 PHA02681 ORF089 virion membran  38.3 1.4E+02   0.003   20.8   5.9   17   13-29     11-27  (92)
 46 KOG3506 40S ribosomal protein   34.2      18 0.00039   22.7   0.6   11  438-448    12-22  (56)
 47 PF03742 PetN:  PetN ;  InterPr  32.7      57  0.0012   17.5   2.1   22    1-22      1-22  (29)
 48 PRK05933 type III secretion sy  32.2      50  0.0011   30.0   3.1   44  358-401   316-362 (372)
 49 COG1759 5-formaminoimidazole-4  32.2      68  0.0015   29.2   3.9   71  358-461   274-351 (361)
 50 PF05961 Chordopox_A13L:  Chord  31.2 1.3E+02  0.0028   20.1   4.0   16   11-26      8-23  (68)
 51 COG0851 MinE Septum formation   30.0   1E+02  0.0023   21.9   3.7   17  328-344    36-52  (88)
 52 PF04798 Baculo_19:  Baculoviru  28.5      25 0.00054   27.7   0.6   24  433-457    56-79  (146)
 53 PF11227 DUF3025:  Protein of u  27.5      37 0.00079   28.9   1.5   19  404-422   193-211 (212)
 54 PF12444 Sox_N:  Sox developmen  27.0      41  0.0009   23.8   1.4   20  455-474    60-79  (84)
 55 PF14483 Cut8_M:  Cut8 dimerisa  27.0 1.1E+02  0.0024   17.8   3.0   17  320-336    18-35  (38)
 56 TIGR02588 conserved hypothetic  25.9 1.4E+02   0.003   22.9   4.1   17    6-22      3-19  (122)
 57 COG2101 SPT15 TATA-box binding  25.4      21 0.00046   29.0  -0.2   37  416-452    35-71  (185)
 58 PF05568 ASFV_J13L:  African sw  25.0      81  0.0018   24.6   2.7   11    5-15     28-38  (189)
 59 PF15330 SIT:  SHP2-interacting  24.3 1.8E+02   0.004   21.8   4.5   10   42-51     46-55  (107)
 60 PRK04989 psbM photosystem II r  24.2 1.5E+02  0.0032   16.9   3.1   26    1-26      1-26  (35)
 61 PF13893 RRM_5:  RNA recognitio  23.8 1.9E+02  0.0042   18.0   4.9   35   59-93      1-39  (56)
 62 PHA03162 hypothetical protein;  23.0      84  0.0018   24.2   2.5   24  441-464     2-25  (135)
 63 PF14824 Sirohm_synth_M:  Siroh  22.5 1.1E+02  0.0023   16.8   2.1   15  327-341    15-29  (30)
 64 PF05151 PsbM:  Photosystem II   22.3 1.5E+02  0.0033   16.3   3.7   26    1-26      1-26  (31)
 65 COG1886 FliN Flagellar motor s  21.8      97  0.0021   24.5   2.8   41  361-401    84-126 (136)
 66 PF14129 DUF4296:  Domain of un  20.7 3.2E+02   0.007   19.4   6.1   48  295-342    31-78  (87)
 67 PRK13991 cell division topolog  20.0 2.4E+02  0.0051   20.3   4.1   18  327-344    35-52  (87)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.7e-84  Score=616.63  Aligned_cols=468  Identities=46%  Similarity=0.818  Sum_probs=405.9

Q ss_pred             HHHHHhcCCCCCCCCCCCCcccccccccCCC-CcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCC
Q 010388           24 LSVRLRRRKLNLPPGPKPWPIIGNLHLIGSL-PHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGR  102 (512)
Q Consensus        24 ~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~  102 (512)
                      .++.+.+++.+.||||+++|++||++.+... +++.+.++.++|||++.+++|..++|+|++++++++++.+++..|+++
T Consensus        16 ~~~~~~~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~R   95 (489)
T KOG0156|consen   16 LFFKKYRKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADR   95 (489)
T ss_pred             HHHHhccCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCC
Confidence            3334444458899999999999999999776 999999999999999999999999999999999999999999999999


Q ss_pred             CCc-CcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh-cCCCeehHHHHHHHH
Q 010388          103 PKT-AAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL-SGKPIMLKDHLSDLS  180 (512)
Q Consensus       103 ~~~-~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~  180 (512)
                      +.. ........++.+.+++.+|+.|+.+||.....+++...++++...-.++++.+++.+.+. .++++|+...+..++
T Consensus        96 p~~~~~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~  175 (489)
T KOG0156|consen   96 PDPTATLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLV  175 (489)
T ss_pred             CCchhhHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHH
Confidence            872 233555556778889989999999999999999999999998888899999999999862 227899999999999


Q ss_pred             HHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccc-cccccCc-cchHHHHHHHHHHHHHHHHHHH
Q 010388          181 LAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIP-WLGFLDL-QGNIKRMKALAKKFDKFLEHVL  258 (512)
Q Consensus       181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i  258 (512)
                      .++|++++||.++...+    .....++..++.......+.....+++| ++.++.. .+..+.......++..++++++
T Consensus       176 ~nvI~~~~fG~rf~~~~----~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i  251 (489)
T KOG0156|consen  176 GNVICRMLFGRRFEEED----EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERII  251 (489)
T ss_pred             HHHHHHHHhCCccccCC----chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997642    1233568888889888888888888899 6666642 3566667777777999999999


Q ss_pred             HHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHH
Q 010388          259 DEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEEL  338 (512)
Q Consensus       259 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei  338 (512)
                      ++++... . + +...|+++.++...++++.+. +++++|.+.+..+++||+|||++++.|++.+|++||++|+|+++||
T Consensus       252 ~eh~~~~-~-~-~~~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEI  327 (489)
T KOG0156|consen  252 DEHREKI-G-D-EEGRDFVDALLKLMKEEKAEG-LTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEI  327 (489)
T ss_pred             HHHHhhh-c-c-CCCCcHHHHHHHhhcccccCC-CCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence            9998875 2 1 222899999999876543222 9999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCC
Q 010388          339 DRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEF  418 (512)
Q Consensus       339 ~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  418 (512)
                      ++++|.++.++.+|+.+||||+|||+||+|++|++|..+||.+.+|+.++||.|||||.|+++.|++||||++|+||++|
T Consensus       328 d~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF  407 (489)
T KOG0156|consen  328 DEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEF  407 (489)
T ss_pred             HHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCcccc
Confidence            99999988899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCce
Q 010388          419 YPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLE  498 (512)
Q Consensus       419 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (512)
                      +||||++.+ +.+.....++|||.|+|.|||..+|.+++.+++|.|+++|||++.++    .+++... +.+...+.++.
T Consensus       408 ~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~  481 (489)
T KOG0156|consen  408 KPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLK  481 (489)
T ss_pred             ChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC----CCCCccc-ccceecCCcce
Confidence            999999874 22236779999999999999999999999999999999999999865    2344433 35566677888


Q ss_pred             EEeccCC
Q 010388          499 VLAHPRL  505 (512)
Q Consensus       499 ~~~~~r~  505 (512)
                      +...+|.
T Consensus       482 ~~~~~r~  488 (489)
T KOG0156|consen  482 AVPVPRL  488 (489)
T ss_pred             eeeecCC
Confidence            8888775


No 2  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=3.2e-80  Score=611.95  Aligned_cols=482  Identities=39%  Similarity=0.769  Sum_probs=389.5

Q ss_pred             HhcCCCCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCc
Q 010388           28 LRRRKLNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAA  107 (512)
Q Consensus        28 ~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~  107 (512)
                      +.++..+.||||+++|++|++..+..+++..+.++++|||++|++++++.++++++||+++++++.++...|..++....
T Consensus        26 ~~~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~  105 (514)
T PLN03112         26 SMRKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLA  105 (514)
T ss_pred             cccCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccc
Confidence            33445578999999999999988877789999999999999999999999999999999999999877777776655432


Q ss_pred             ccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHH
Q 010388          108 GKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~  185 (512)
                      .....++...++++.+|+.|+++|+.+.++.|+.++++.+.+.+.++++.+++.+.+.  .++++|+.+.++.+++|+++
T Consensus       106 ~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~  185 (514)
T PLN03112        106 AVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVT  185 (514)
T ss_pred             ceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHH
Confidence            2222233344567788999999999976678999999999999999999999987653  46689999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARR  265 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (512)
                      .++||.++...... ......++..+...+...........++|++.++.+....++..+..+.+.+++++.++++++..
T Consensus       186 ~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  264 (514)
T PLN03112        186 RMLLGKQYFGAESA-GPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRAR  264 (514)
T ss_pred             HHHcCCcccccccc-chHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999987432210 00122456666665554433333344567665544334456667778888889999998877654


Q ss_pred             cCCC-CCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 010388          266 KGVE-NYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGK  344 (512)
Q Consensus       266 ~~~~-~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  344 (512)
                      +... .....|+++.++++..+.+ +..++++++.+++..+++||+|||+++++|++++|++||++|+++++||+++++.
T Consensus       265 ~~~~~~~~~~d~l~~ll~~~~~~~-~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~  343 (514)
T PLN03112        265 SGKLPGGKDMDFVDVLLSLPGENG-KEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR  343 (514)
T ss_pred             cccccCCccchHHHHHHHhhcccc-ccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC
Confidence            3211 1234699999998654321 2358999999999999999999999999999999999999999999999999988


Q ss_pred             CCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCccc
Q 010388          345 ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFI  424 (512)
Q Consensus       345 ~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l  424 (512)
                      ++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++++++||||++|+||++||||||+
T Consensus       344 ~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~  423 (514)
T PLN03112        344 NRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHW  423 (514)
T ss_pred             CCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccC
Confidence            77899999999999999999999999999986679999999999999999999999999999999999999999999986


Q ss_pred             CCCCC--c--cCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEE
Q 010388          425 GKSID--V--KGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVL  500 (512)
Q Consensus       425 ~~~~~--~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (512)
                      +....  .  .....+++|||.|+|.|+|++||++|+++++++|+++||+++.++....++......++..+++++++++
T Consensus       424 ~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (514)
T PLN03112        424 PAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAV  503 (514)
T ss_pred             CCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEE
Confidence            53211  1  1234579999999999999999999999999999999999987553222344444556777788899999


Q ss_pred             eccCCCCCCCC
Q 010388          501 AHPRLSPHLYN  511 (512)
Q Consensus       501 ~~~r~~~~~~~  511 (512)
                      ++||..+|+|.
T Consensus       504 ~~~r~~~~~~~  514 (514)
T PLN03112        504 ATPRLAPHLYG  514 (514)
T ss_pred             eecCCcccccC
Confidence            99999999983


No 3  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=2.9e-80  Score=610.70  Aligned_cols=470  Identities=40%  Similarity=0.768  Sum_probs=375.6

Q ss_pred             HHHhcCCCCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCc
Q 010388           26 VRLRRRKLNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKT  105 (512)
Q Consensus        26 ~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~  105 (512)
                      .++.+++.+.||||+++|++|++..+...++..+.+++++||++|++++++.++|+++||+++++++.++...|..++..
T Consensus        28 ~~~~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~  107 (516)
T PLN02183         28 ISRLRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPAN  107 (516)
T ss_pred             HhhccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcc
Confidence            34445567889999999999999877555678899999999999999999999999999999999999877667666543


Q ss_pred             CcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhcCCCeehHHHHHHHHHHHHH
Q 010388          106 AAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELSGKPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~dvi~  185 (512)
                      ........+...++++.+|+.|+++|+.+.+++|+.+.++.+.+. .++++.+++.|....++++|+.++++.+++|+++
T Consensus       108 ~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~  186 (516)
T PLN02183        108 IAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITY  186 (516)
T ss_pred             cchhccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHH
Confidence            222222222245678888999999999965789999999988886 5789999999975457789999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARR  265 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (512)
                      +++||.+++...        .++.+....+............+|++.++.+....++..+..+.+.+++.++++++.+..
T Consensus       187 ~~~fG~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (516)
T PLN02183        187 RAAFGSSSNEGQ--------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKR  258 (516)
T ss_pred             hHhhcCcccchH--------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999775422        445555555544333333344566665543333345666777888888888888876543


Q ss_pred             cCCC-----CCCcCcHHHHHHhhcCCCC---------cccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHH
Q 010388          266 KGVE-----NYVAKDMVDVLLQLADDPS---------LEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIF  331 (512)
Q Consensus       266 ~~~~-----~~~~~dll~~ll~~~~~~~---------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  331 (512)
                      +..+     .....|+++.++++..+..         .+..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       259 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq  338 (516)
T PLN02183        259 KNQNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDL  338 (516)
T ss_pred             cccccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHH
Confidence            2210     1134689999998643211         1235899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCC
Q 010388          332 EKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSL  411 (512)
Q Consensus       332 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      +|+++|++++++.++.++.+++++||||+|||+|||||+|++++.. |.+.+|++++||.|||||.|.++.+++||||++
T Consensus       339 ~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~-r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~  417 (516)
T PLN02183        339 KRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLL-HETAEDAEVAGYFIPKRSRVMINAWAIGRDKNS  417 (516)
T ss_pred             HHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCcccee-eeccCceeECCEEECCCCEEEEehhhhcCCccc
Confidence            9999999999986677899999999999999999999999999975 999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccCCCCC-ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCcc
Q 010388          412 WEKPNEFYPERFIGKSID-VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLS  490 (512)
Q Consensus       412 ~~dp~~F~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  490 (512)
                      |+||++|+||||++++.+ ...+..+|+|||.|+|.|+|++||++|+++++|+|+++|++++.++....+......++.+
T Consensus       418 ~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~  497 (516)
T PLN02183        418 WEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFGLT  497 (516)
T ss_pred             cCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccccc
Confidence            999999999999964431 1234568999999999999999999999999999999999999776322223333344555


Q ss_pred             ccCCCCceEEeccCC
Q 010388          491 TPRKFPLEVLAHPRL  505 (512)
Q Consensus       491 ~~~~~~~~~~~~~r~  505 (512)
                      .+...++++.+++|-
T Consensus       498 ~~~~~~~~~~~~~r~  512 (516)
T PLN02183        498 APRATRLVAVPTYRL  512 (516)
T ss_pred             cccCCCcEEEeecCC
Confidence            556668889888883


No 4  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.4e-81  Score=581.69  Aligned_cols=459  Identities=25%  Similarity=0.372  Sum_probs=362.7

Q ss_pred             cCCCCCCCCCCCCcccccccccC--CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCc
Q 010388           30 RRKLNLPPGPKPWPIIGNLHLIG--SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAA  107 (512)
Q Consensus        30 ~~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~  107 (512)
                      .+.++.+|+|+++|++|++..+.  +.+.....+...+||+++.+..+.++.++|+||+.+++|+.++..+|.++.....
T Consensus        27 yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~  106 (499)
T KOG0158|consen   27 YWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIY  106 (499)
T ss_pred             hhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCc
Confidence            56777999999999999998883  3335555555666699999999999999999999999999999888888542111


Q ss_pred             ccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhcC--CCeehHHHHHHHHHHHHH
Q 010388          108 GKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELSG--KPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~vdl~~~~~~~~~dvi~  185 (512)
                      .+.........++..+|++|+++|..+ +|.|+...++.+.+++++.++++++.+.++..  ..+++.+.+..++.|+|+
T Consensus       107 ~d~~~~l~~~~Lf~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~  185 (499)
T KOG0158|consen  107 GDPEDPLSALNLFFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIG  185 (499)
T ss_pred             CCCCCcccccCchhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHh
Confidence            111111122457778899999999997 89999999999999999999999999998633  479999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHh-hccCCC----ccccccccccCccchHHHHHHHHHHHHHHHHHHHHH
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLL-NGVLDI----GDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDE  260 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  260 (512)
                      +++||.+.++..+     ....+..+....... .....+    ...+|.+....  ..........+.+.+.+...++.
T Consensus       186 ~~AfG~~~~s~~d-----~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l--~~~~~~~~~~~~~~~~v~~~v~~  258 (499)
T KOG0158|consen  186 SCAFGLDANSLRD-----PKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPL--RVKLFPEDVTDFFRKLVNSRVEQ  258 (499)
T ss_pred             HhhcccchhhhcC-----chHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhh--hcccChHHHHHHHHHHHHHHHHH
Confidence            9999999987662     224555555555444 221111    11122221110  00111223334444555555555


Q ss_pred             HHHHhcCCCCCCcCcHHHHHHhhcCC---CCccc-ccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHH
Q 010388          261 HNARRKGVENYVAKDMVDVLLQLADD---PSLEV-KIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIE  336 (512)
Q Consensus       261 ~~~~~~~~~~~~~~dll~~ll~~~~~---~~~~~-~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  336 (512)
                      |    +. .+..+.|+++.++++..+   +.... .++.+||+++++.+++||.||||++++.++|+||+||++|+|||+
T Consensus       259 R----~~-~~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLre  333 (499)
T KOG0158|consen  259 R----EK-ENIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLRE  333 (499)
T ss_pred             H----Hh-cCCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHH
Confidence            5    11 246788999999998753   11122 599999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeec-CeeeCCCCEEEeehhhcccCCCCCCCC
Q 010388          337 ELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVA-GYDIPKGTRVLVSVWAIGRHPSLWEKP  415 (512)
Q Consensus       337 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~-g~~ip~G~~v~~~~~~~~~d~~~~~dp  415 (512)
                      ||++++.++..+|+|.+.+|+||++||+||||+||+++.. .|++++|++++ ++.||||+.|.++++++||||++||||
T Consensus       334 EI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~-~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~P  412 (499)
T KOG0158|consen  334 EIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL-NRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEP  412 (499)
T ss_pred             HHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc-cceecCceecCCCeEeCCCCEEEeecccccCCcccCCCc
Confidence            9999976655599999999999999999999999999995 59999999999 999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCC
Q 010388          416 NEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKF  495 (512)
Q Consensus       416 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (512)
                      ++|+||||.+.+.+ ..++.+|+|||.|||.|+|.+||++|+|++|++||++|+++..+..  .+.......++++.|++
T Consensus       413 e~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t--~~~~~~~~~~~~l~pk~  489 (499)
T KOG0158|consen  413 EKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT--IIPLEGDPKGFTLSPKG  489 (499)
T ss_pred             ccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc--cCcccCCccceeeecCC
Confidence            99999999976644 4477899999999999999999999999999999999999987632  22211112267788999


Q ss_pred             CceEEeccCC
Q 010388          496 PLEVLAHPRL  505 (512)
Q Consensus       496 ~~~~~~~~r~  505 (512)
                      ++++++++|+
T Consensus       490 gi~Lkl~~r~  499 (499)
T KOG0158|consen  490 GIWLKLEPRD  499 (499)
T ss_pred             ceEEEEEeCC
Confidence            9999999985


No 5  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=6.1e-80  Score=608.24  Aligned_cols=482  Identities=37%  Similarity=0.690  Sum_probs=384.3

Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCcccccccccCC-CCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHh
Q 010388           16 LATLALVLLSVRLRRRKLNLPPGPKPWPIIGNLHLIGS-LPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKT   94 (512)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~   94 (512)
                      ++++++++..++.++++.+.||||+++|++|++..+.. +++.++.+++++||++|++++++.++|+++||+++++++.+
T Consensus        10 l~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~   89 (499)
T PLN03234         10 LVAAAAFFFLRSTTKKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKT   89 (499)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHh
Confidence            33344444555556667788999999999999988854 68899999999999999999999999999999999999998


Q ss_pred             CCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeeh
Q 010388           95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIML  172 (512)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl  172 (512)
                      +...|..++...........+....+...++.|+++|+.+..+.|++++++.+.+.+.+.++++++.|.+.  .++++|+
T Consensus        90 ~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~  169 (499)
T PLN03234         90 QDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDL  169 (499)
T ss_pred             CCccccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEH
Confidence            77777766543222221211223335566889999999865789999999999999999999999999753  4678999


Q ss_pred             HHHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccC-ccchHHHHHHHHHHHH
Q 010388          173 KDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFD  251 (512)
Q Consensus       173 ~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~  251 (512)
                      .+.+..+++|++++++||.+++...     ....++...................+|++.++. ..+..++..++.+.+.
T Consensus       170 ~~~~~~~t~dvi~~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~  244 (499)
T PLN03234        170 SELLLSFTNCVVCRQAFGKRYNEYG-----TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELD  244 (499)
T ss_pred             HHHHHHHHHHHHHHHHhCCcccccc-----hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHH
Confidence            9999999999999999999886433     122445554444433222222333445443321 1223456778888999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHH
Q 010388          252 KFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIF  331 (512)
Q Consensus       252 ~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~  331 (512)
                      +++.++++++++....  .....|+++.+++..++...+..+++++|++++.++++||+|||+++++|++++|++||++|
T Consensus       245 ~~~~~~i~~~~~~~~~--~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~  322 (499)
T PLN03234        245 TYLQELLDETLDPNRP--KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAM  322 (499)
T ss_pred             HHHHHHHHHHHhhccc--CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHH
Confidence            9999999887654321  22356899999876543221236899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCC
Q 010388          332 EKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSL  411 (512)
Q Consensus       332 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~  411 (512)
                      +++++|+++++++++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++++.+||||++
T Consensus       323 ~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~  402 (499)
T PLN03234        323 KKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAA  402 (499)
T ss_pred             HHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCccc
Confidence            99999999999877778999999999999999999999999998767999999999999999999999999999999999


Q ss_pred             C-CCCCCCCCCcccCCCCC--ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccC
Q 010388          412 W-EKPNEFYPERFIGKSID--VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFG  488 (512)
Q Consensus       412 ~-~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  488 (512)
                      | +||++||||||+++...  ....+.+++|||.|+|+|+|+++|++|+++++|+|+++|++++.++.++..+......+
T Consensus       403 ~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~  482 (499)
T PLN03234        403 WGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTG  482 (499)
T ss_pred             ccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccc
Confidence            9 89999999999965432  12346689999999999999999999999999999999999998764333445555667


Q ss_pred             ccccCCCCceEEeccC
Q 010388          489 LSTPRKFPLEVLAHPR  504 (512)
Q Consensus       489 ~~~~~~~~~~~~~~~r  504 (512)
                      +...++..+.+++++|
T Consensus       483 ~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        483 LAMHKKEHLVLAPTKH  498 (499)
T ss_pred             cccccCCCeEEEeecC
Confidence            7777888888888776


No 6  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=9.2e-80  Score=607.29  Aligned_cols=474  Identities=42%  Similarity=0.807  Sum_probs=383.2

Q ss_pred             CCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccc
Q 010388           33 LNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTT  112 (512)
Q Consensus        33 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~  112 (512)
                      .+.||||+++|++|++..+..+++..+.+++++||++|++++|+.++++++||+++++++.++...|.+++.........
T Consensus        33 ~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~  112 (517)
T PLN02687         33 RPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMA  112 (517)
T ss_pred             CCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhhc
Confidence            35789999999999998887778999999999999999999999999999999999999998777777665433222222


Q ss_pred             cCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh-cCCCeehHHHHHHHHHHHHHHHHhCc
Q 010388          113 FNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL-SGKPIMLKDHLSDLSLAVISRMVLGK  191 (512)
Q Consensus       113 ~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~vdl~~~~~~~~~dvi~~~~fG~  191 (512)
                      ..+.+++++.+|+.|+++|+.+.++.|+.++++.+.+.+.++++++++.|.+. +++++|+.++++.+++|+++.++||.
T Consensus       113 ~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~  192 (517)
T PLN02687        113 YNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVGR  192 (517)
T ss_pred             cCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhCc
Confidence            22345678888999999999984478999999999999999999999999764 46689999999999999999999999


Q ss_pred             cccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010388          192 NYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENY  271 (512)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  271 (512)
                      ++...+.   ......+..++..+............+|++.|+......++..+..+.+.+++.++++++++..+.. ..
T Consensus       193 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~-~~  268 (517)
T PLN02687        193 RVFAGDG---DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTG-SE  268 (517)
T ss_pred             cccccCC---cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-Cc
Confidence            8754221   1122456666666555433322334566555543333345566677888889999999887664221 23


Q ss_pred             CcCcHHHHHHhhcCCC---CcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCcc
Q 010388          272 VAKDMVDVLLQLADDP---SLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWV  348 (512)
Q Consensus       272 ~~~dll~~ll~~~~~~---~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~  348 (512)
                      ...|+++.++++.++.   ..+..++++++++++..+++||+|||+++++|++++|++||++|+|+++|++++++.++.+
T Consensus       269 ~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~  348 (517)
T PLN02687        269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLV  348 (517)
T ss_pred             ccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCC
Confidence            4569999999875432   1134699999999999999999999999999999999999999999999999998877778


Q ss_pred             cccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCC
Q 010388          349 EEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSI  428 (512)
Q Consensus       349 ~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~  428 (512)
                      +.+++++||||+|||+||||++|+++...+|++.+|++++|+.|||||.|.++.+++||||++|+||++|+||||++.+.
T Consensus       349 ~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~  428 (517)
T PLN02687        349 SESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGE  428 (517)
T ss_pred             CHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCC
Confidence            99999999999999999999999999877799999999999999999999999999999999999999999999996432


Q ss_pred             C----ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccC
Q 010388          429 D----VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR  504 (512)
Q Consensus       429 ~----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (512)
                      .    ....+.+++|||+|+|.|+|++||++|+++++|+|+++|++++.++..+.+.+....++....++.++++++++|
T Consensus       429 ~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R  508 (517)
T PLN02687        429 HAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPRPR  508 (517)
T ss_pred             ccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeeccC
Confidence            1    122456899999999999999999999999999999999999986532222333334555666677899999999


Q ss_pred             CCCCCC
Q 010388          505 LSPHLY  510 (512)
Q Consensus       505 ~~~~~~  510 (512)
                      .=+.-|
T Consensus       509 ~~~~~~  514 (517)
T PLN02687        509 LLPSAY  514 (517)
T ss_pred             CChhhc
Confidence            634444


No 7  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=4.6e-79  Score=598.43  Aligned_cols=472  Identities=38%  Similarity=0.772  Sum_probs=384.4

Q ss_pred             cCCCCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCccc
Q 010388           30 RRKLNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGK  109 (512)
Q Consensus        30 ~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~  109 (512)
                      .++.+.||||+++|++|+++.+...++.++.+++++||+||++++|+.++|+++||+++++++.++...|..++......
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~~  106 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGAT  106 (504)
T ss_pred             cccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccchh
Confidence            34567899999999999988777668899999999999999999999999999999999999998777777766543222


Q ss_pred             ccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHHHH
Q 010388          110 YTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVISRM  187 (512)
Q Consensus       110 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~~~  187 (512)
                      ....+..+++++.+|+.|+++|+.+..+.|+.+.++.+.+.+.+++..+++.+.+.  +|+++|+.+++..+++|+++++
T Consensus       107 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~~  186 (504)
T PLN00110        107 HLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQV  186 (504)
T ss_pred             hhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHHH
Confidence            22233345678888999999999985468999999999999999999999998753  5678999999999999999999


Q ss_pred             HhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010388          188 VLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKG  267 (512)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (512)
                      +||.++....    .....++..++...............+|++.|+......+...+..+.+.+++.+.++++++..+.
T Consensus       187 ~fg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  262 (504)
T PLN00110        187 ILSRRVFETK----GSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHE  262 (504)
T ss_pred             HhCCcccccC----chhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999872111    012255666666665443333334556766554333334556667788888888888887664321


Q ss_pred             CCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCc
Q 010388          268 VENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERW  347 (512)
Q Consensus       268 ~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  347 (512)
                        .....|+++.++++.++. .+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|++++++.+..
T Consensus       263 --~~~~~d~l~~ll~~~~~~-~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~  339 (504)
T PLN00110        263 --RKGNPDFLDVVMANQENS-TGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRR  339 (504)
T ss_pred             --cccCCChhhHHhhccccc-CCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC
Confidence              123469999999764322 13469999999999999999999999999999999999999999999999999987777


Q ss_pred             ccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCC
Q 010388          348 VEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS  427 (512)
Q Consensus       348 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~  427 (512)
                      ++.+++++||||+|||+||||++|++++..+|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||++++
T Consensus       340 ~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~  419 (504)
T PLN00110        340 LVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEK  419 (504)
T ss_pred             CCHHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCC
Confidence            89999999999999999999999999987779999999999999999999999999999999999999999999999643


Q ss_pred             CCcc---CCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccC
Q 010388          428 IDVK---GHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR  504 (512)
Q Consensus       428 ~~~~---~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (512)
                      ....   .....++|||.|+|.|+|++||++|+++++|+|+++||+++.++.   +.+.....+++..|+.++++++++|
T Consensus       420 ~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        420 NAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             CcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCC---ccCcccccccccccCCCceEeeccC
Confidence            2211   123579999999999999999999999999999999999997652   3333334567788889999999999


Q ss_pred             CCCCCCC
Q 010388          505 LSPHLYN  511 (512)
Q Consensus       505 ~~~~~~~  511 (512)
                      ..+..|.
T Consensus       497 ~~~~~~~  503 (504)
T PLN00110        497 LHQSAYA  503 (504)
T ss_pred             CCchhcc
Confidence            8766663


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=3.4e-79  Score=604.84  Aligned_cols=475  Identities=32%  Similarity=0.568  Sum_probs=371.8

Q ss_pred             CCCCCCCCCCCcccccccccCCC-C-cHHHHHHHHhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcc
Q 010388           32 KLNLPPGPKPWPIIGNLHLIGSL-P-HRSVHALSEKYG-PIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAG  108 (512)
Q Consensus        32 ~~~~ppgp~~~p~~G~~~~~~~~-~-~~~~~~~~~kyG-~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~  108 (512)
                      +.+.||||+++|++|+++.+..+ + +.++.++.++|| +++++++|+.++|+++||+++++++.+++..|..++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            44689999999999999887432 3 577889999999 89999999999999999999999999888778877654333


Q ss_pred             cccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHHH
Q 010388          109 KYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVISR  186 (512)
Q Consensus       109 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~~  186 (512)
                      ...+.+..+++++.+|+.|+++|+.+.+++++....+.+.+.+.++++.+++.+.+.  +++++|+.+.++.+++|++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            333333234678888999999999986677777777788888888899998887653  456899999999999999999


Q ss_pred             HHhCccccccccccccCChHHHHHHHHHHHHhhc---cCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          187 MVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNG---VLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNA  263 (512)
Q Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (512)
                      ++||.++........+....+....+...+....   ......++|++.+++..+..+...+..+.+.+++.++++++++
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999987432100000001122223333332111   1122345666554422233444555677788888999988776


Q ss_pred             HhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhc
Q 010388          264 RRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIG  343 (512)
Q Consensus       264 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~  343 (512)
                      ..+..+.....|+++.|++..++.+ ...++++++++++.++++||+|||+++++|++++|+.||++|+|+++||+++++
T Consensus       295 ~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g  373 (543)
T PLN02971        295 MWREGKRTQIEDFLDIFISIKDEAG-QPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVG  373 (543)
T ss_pred             HHhccCCCCCcCHHHHHHhhhcccC-CCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence            4422112234699999998654321 224899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcc
Q 010388          344 KERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERF  423 (512)
Q Consensus       344 ~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~  423 (512)
                      .++.++.+++.+||||+|||+|+||++|+++...+|.+.+|++++||.||||+.|+++++++||||++|+||++|+||||
T Consensus       374 ~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRf  453 (543)
T PLN02971        374 KERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERH  453 (543)
T ss_pred             CCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccC
Confidence            87889999999999999999999999999998778999999999999999999999999999999999999999999999


Q ss_pred             cCCCCC--ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEe
Q 010388          424 IGKSID--VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLA  501 (512)
Q Consensus       424 l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (512)
                      ++++.+  ...++.+++|||.|+|.|+|++||++|+++++|+|+++|++++.++.  .+.++...++ +...++++.+.+
T Consensus       454 l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~  530 (543)
T PLN02971        454 LNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSE--TRVELMESSH-DMFLSKPLVMVG  530 (543)
T ss_pred             CCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCC--CCcchhhhcC-cccccccceeee
Confidence            964322  12245689999999999999999999999999999999999987653  2355555555 443456999999


Q ss_pred             ccCCCCCCC
Q 010388          502 HPRLSPHLY  510 (512)
Q Consensus       502 ~~r~~~~~~  510 (512)
                      ++|-..-+|
T Consensus       531 ~~~~~~~~~  539 (543)
T PLN02971        531 ELRLSEDLY  539 (543)
T ss_pred             eecCCcccc
Confidence            999776666


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=9.5e-78  Score=591.38  Aligned_cols=470  Identities=35%  Similarity=0.676  Sum_probs=363.6

Q ss_pred             hcCCCCCCCCCCCCccccccccc-CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCc
Q 010388           29 RRRKLNLPPGPKPWPIIGNLHLI-GSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAA  107 (512)
Q Consensus        29 ~~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~  107 (512)
                      .++..+.||||+++|++|++..+ ..+++..+.+++++||++|++++++.++|+++||+++++++.++...+.+++....
T Consensus        24 ~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~  103 (502)
T PLN02966         24 KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRG  103 (502)
T ss_pred             ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCcc
Confidence            34455789999999999999887 44688999999999999999999999999999999999999987666665443322


Q ss_pred             ccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHH
Q 010388          108 GKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~  185 (512)
                      ......+.....+..+|+.|+++|+.+.+++|++++++.+.+.+.+.++++++.|.+.  .++++|+.++++.+++|+++
T Consensus       104 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~  183 (502)
T PLN02966        104 HEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVC  183 (502)
T ss_pred             ceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHH
Confidence            2222223233445667999999999955899999999999999999999999999763  45679999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccC-ccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLD-LQGNIKRMKALAKKFDKFLEHVLDEHNAR  264 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (512)
                      .++||.+++...     .....+.+++..............++|++..+. .....+......+...+++.+.++++...
T Consensus       184 ~~~fG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  258 (502)
T PLN02966        184 RQAFGKKYNEDG-----EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDP  258 (502)
T ss_pred             HHHhCCccCccc-----hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999886433     112344444444333333222233445332211 11112333445566667777777665432


Q ss_pred             hcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC
Q 010388          265 RKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGK  344 (512)
Q Consensus       265 ~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~  344 (512)
                      ..  ......|+++.++++.++...+..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.
T Consensus       259 ~~--~~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~  336 (502)
T PLN02966        259 KR--VKPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKE  336 (502)
T ss_pred             cc--cccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcc
Confidence            21  1123468999999876543223458999999999999999999999999999999999999999999999999874


Q ss_pred             C--CcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCC-CCCCCCCCC
Q 010388          345 E--RWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPE  421 (512)
Q Consensus       345 ~--~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~  421 (512)
                      +  ..++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++++++||||++| +||++|+||
T Consensus       337 ~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~Pe  416 (502)
T PLN02966        337 KGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPE  416 (502)
T ss_pred             cCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChh
Confidence            3  3578999999999999999999999999987679999999999999999999999999999999999 999999999


Q ss_pred             cccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEe
Q 010388          422 RFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLA  501 (512)
Q Consensus       422 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (512)
                      ||++++.+....+..++|||.|+|+|+|++||++|+++++|.||++|++++.++..+++++.....++...++..+  ++
T Consensus       417 Rwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  494 (502)
T PLN02966        417 RFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHL--KL  494 (502)
T ss_pred             hhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCe--EE
Confidence            9996543222345689999999999999999999999999999999999998764343444445556655444445  45


Q ss_pred             ccCCCC
Q 010388          502 HPRLSP  507 (512)
Q Consensus       502 ~~r~~~  507 (512)
                      ++|+-+
T Consensus       495 ~~~~~~  500 (502)
T PLN02966        495 VPEKVN  500 (502)
T ss_pred             EEEeCC
Confidence            555433


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=3.8e-77  Score=585.80  Aligned_cols=473  Identities=24%  Similarity=0.404  Sum_probs=366.1

Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHH
Q 010388           12 LTAWLATLALVLLSVRLRRRKLNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVV   91 (512)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i   91 (512)
                      ++.+.+.+++...+.++.+.+.+.+|||+++|++|++..+..+++..+.+++++||++|++++++.++|+++||++++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~i   86 (482)
T PTZ00404          7 ILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREM   86 (482)
T ss_pred             HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHH
Confidence            33333334444444445566678899999999999998887788999999999999999999999999999999999999


Q ss_pred             HHhCCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCC
Q 010388           92 LKTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKP  169 (512)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~  169 (512)
                      +.++...|..++.........+  ...+++.+|+.|+++|+.+ ++.|+.+.++.+.+.+.+.++.+++.|.+.  .++.
T Consensus        87 l~~~~~~~~~r~~~~~~~~~~~--~~~l~~~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~  163 (482)
T PTZ00404         87 FVDNFDNFSDRPKIPSIKHGTF--YHGIVTSSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGET  163 (482)
T ss_pred             HHhcchhhcCCCCcceeeeecc--CCceeccChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9876655655544332211111  2346677899999999997 799999999999999999999999999753  4667


Q ss_pred             eehHHHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHH
Q 010388          170 IMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKK  249 (512)
Q Consensus       170 vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  249 (512)
                      +|+.+++..+++|+++.++||.+++..+.. .......+...+..++...........++++.... ........+..+.
T Consensus       164 vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  241 (482)
T PTZ00404        164 FEPRYYLTKFTMSAMFKYIFNEDISFDEDI-HNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLY-YQYLEHTDKNFKK  241 (482)
T ss_pred             cCHHHHHHHHHHHHHHHHHhcccccccccc-chhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhh-HHHHHHHHHHHHH
Confidence            999999999999999999999988643210 00112345555555544332211112222221110 1112233445667


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChH
Q 010388          250 FDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPE  329 (512)
Q Consensus       250 ~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  329 (512)
                      +.+++++.++++++..+   .....|+++.++++..+.   .....+++++++..+++||+|||+++++|++++|++||+
T Consensus       242 ~~~~~~~~i~~~~~~~~---~~~~~dll~~ll~~~~~~---~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  315 (482)
T PTZ00404        242 IKKFIKEKYHEHLKTID---PEVPRDLLDLLIKEYGTN---TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPE  315 (482)
T ss_pred             HHHHHHHHHHHHHHccC---CCCcccHHHHHHHHhccC---CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcH
Confidence            77777777766554431   223569999999864321   122234588999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceee-cCeeeCCCCEEEeehhhcccC
Q 010388          330 IFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV-AGYDIPKGTRVLVSVWAIGRH  408 (512)
Q Consensus       330 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d  408 (512)
                      +|+|+++||+++++++..++.+++++||||+|||+|||||+|+++...+|.+.+|+++ +||.||||+.|.++.+++|||
T Consensus       316 vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrd  395 (482)
T PTZ00404        316 IQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRN  395 (482)
T ss_pred             HHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCC
Confidence            9999999999999876678999999999999999999999999997667999999999 999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccC
Q 010388          409 PSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFG  488 (512)
Q Consensus       409 ~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~  488 (512)
                      |++|+||++||||||++..     .+.+++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +.+.....+
T Consensus       396 p~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~  467 (482)
T PTZ00404        396 EKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGK---KIDETEEYG  467 (482)
T ss_pred             ccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCC---CCCcccccc
Confidence            9999999999999998642     35689999999999999999999999999999999999987552   232333345


Q ss_pred             ccccCCCCceEEeccC
Q 010388          489 LSTPRKFPLEVLAHPR  504 (512)
Q Consensus       489 ~~~~~~~~~~~~~~~r  504 (512)
                      ++.. +.++++.+++|
T Consensus       468 ~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        468 LTLK-PNKFKVLLEKR  482 (482)
T ss_pred             eeec-CCCceeeeecC
Confidence            5565 56899999987


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=5.1e-77  Score=588.05  Aligned_cols=476  Identities=31%  Similarity=0.546  Sum_probs=362.0

Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCcccccccccCCC-CcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCc
Q 010388           19 LALVLLSVRLRRRKLNLPPGPKPWPIIGNLHLIGSL-PHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDV   97 (512)
Q Consensus        19 ~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~-~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~   97 (512)
                      +.+.++.++...++.+.||||+++|++|++..+..+ .+..+.+++++||+||++++++.++|+++||+.+++++.++..
T Consensus        15 ~~~~~~~~~~~~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~   94 (503)
T PLN02394         15 IVLALLVSKLRGKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGV   94 (503)
T ss_pred             HHHHHHHHHHhcCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCc
Confidence            333344455566778899999999999999888544 4678899999999999999999999999999999999987766


Q ss_pred             cccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh---cCCCeehHH
Q 010388           98 LFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL---SGKPIMLKD  174 (512)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~---~~~~vdl~~  174 (512)
                      .+..++...........+.+.+++.+|+.|+++||.+..+.|+++.++.+.+.++++++++++.|.+.   .++.+|+.+
T Consensus        95 ~~~~r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~  174 (503)
T PLN02394         95 EFGSRTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRR  174 (503)
T ss_pred             cccCCCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHH
Confidence            66655433322222222335677888999999999975589999999999999999999999999764   244699999


Q ss_pred             HHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhcc--CCCccccccccccCccchHHHHHHHHHHHHH
Q 010388          175 HLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGV--LDIGDSIPWLGFLDLQGNIKRMKALAKKFDK  252 (512)
Q Consensus       175 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~  252 (512)
                      .++.+++|++++++||.+++..+.    .....+.............  ......+|++.... ....+...........
T Consensus       175 ~~~~~~~dvi~~~~fG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  249 (503)
T PLN02394        175 RLQLMMYNIMYRMMFDRRFESEDD----PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLA  249 (503)
T ss_pred             HHHHHHHHHHHHHHhCCCcccccc----hhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHH
Confidence            999999999999999999865331    1122222332222222111  11122344332211 1111222222222222


Q ss_pred             -HHHHHHHHHHHHhcCC--CCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChH
Q 010388          253 -FLEHVLDEHNARRKGV--ENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPE  329 (512)
Q Consensus       253 -~~~~~i~~~~~~~~~~--~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~  329 (512)
                       +.+..++++++..+..  +.....|+++.|+++.++    ..++++++..++..+++||+|||+++++|++++|++||+
T Consensus       250 ~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~  325 (503)
T PLN02394        250 LFKDYFVDERKKLMSAKGMDKEGLKCAIDHILEAQKK----GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPE  325 (503)
T ss_pred             HHHHHHHHHHHHHhhhccCCcchhhhHHHHHHhcccc----CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHH
Confidence             3344566655432110  122346899999987543    258899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCC
Q 010388          330 IFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHP  409 (512)
Q Consensus       330 ~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~  409 (512)
                      +|+||++||+++++.++.++.+++++||||+|||+||||++|+++...+|.+.+|++++||.|||||.|.++++++||||
T Consensus       326 vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~  405 (503)
T PLN02394        326 IQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNP  405 (503)
T ss_pred             HHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCc
Confidence            99999999999998766789999999999999999999999999998889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCcccCCCCC--ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCccccc
Q 010388          410 SLWEKPNEFYPERFIGKSID--VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIF  487 (512)
Q Consensus       410 ~~~~dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~  487 (512)
                      ++|+||++||||||++.+.+  ......+++|||.|+|.|+|++||++|+++++|+|+++|++++.++. + +++.....
T Consensus       406 ~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~-~-~~~~~~~~  483 (503)
T PLN02394        406 ELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQ-S-KIDVSEKG  483 (503)
T ss_pred             ccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCC-C-cCcccccc
Confidence            99999999999999965332  12245689999999999999999999999999999999999987663 1 23333223


Q ss_pred             -CccccCCCCceEEeccCC
Q 010388          488 -GLSTPRKFPLEVLAHPRL  505 (512)
Q Consensus       488 -~~~~~~~~~~~~~~~~r~  505 (512)
                       ++....+.+++++++||+
T Consensus       484 ~~~~~~~~~~~~~~~~~r~  502 (503)
T PLN02394        484 GQFSLHIAKHSTVVFKPRS  502 (503)
T ss_pred             CceeeccCCCceEEeecCC
Confidence             244534559999999996


No 12 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=4.8e-77  Score=588.22  Aligned_cols=466  Identities=25%  Similarity=0.460  Sum_probs=364.2

Q ss_pred             CCCCCCCCCCCCcccccccccC---CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCc
Q 010388           31 RKLNLPPGPKPWPIIGNLHLIG---SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAA  107 (512)
Q Consensus        31 ~~~~~ppgp~~~p~~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~  107 (512)
                      ++.+.||||+++|++|++..+.   ..++..+.+++++||++|++++|+.++|+++||+++++++.++...|..++....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3456889999999999987653   3467889999999999999999999999999999999999987777776655332


Q ss_pred             ccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHH
Q 010388          108 GKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       108 ~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~  185 (512)
                      ....+.+.....+..+|+.|+++||.+.+++|+.++++.+.+.+.++++.+++.|.+.  .++.+|+.+.++.+++++++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence            2222222112222467999999998656899999999999999999999999999764  23468999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHhh-ccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLN-GVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNAR  264 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (512)
                      .++||.+++...       ...+........... ........+|++.+.......++..+..+.+.+++..+++++++.
T Consensus       192 ~~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  264 (519)
T PLN00168        192 LMCFGERLDEPA-------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREY  264 (519)
T ss_pred             HHHcCCCcChhh-------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999885321       123333333322211 122233445544322112223455567788888999999887664


Q ss_pred             hcC----C-CC----CCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHH
Q 010388          265 RKG----V-EN----YVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAI  335 (512)
Q Consensus       265 ~~~----~-~~----~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~  335 (512)
                      .+.    . +.    ....|+++.|++.......+..++++++++++.++++||+|||+++++|++++|++||++|+|++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~  344 (519)
T PLN00168        265 KNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLH  344 (519)
T ss_pred             hhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            311    0 00    11458999999765322223469999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCC-CcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCC
Q 010388          336 EELDRVIGKE-RWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEK  414 (512)
Q Consensus       336 ~Ei~~~~~~~-~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~d  414 (512)
                      +||+++++.+ +.++.+++++||||+|||+||||++|+++..++|.+.+|++++||.||||+.|.++++++||||++|+|
T Consensus       345 ~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~  424 (519)
T PLN00168        345 DEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWER  424 (519)
T ss_pred             HHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCC
Confidence            9999998753 568999999999999999999999999998878999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCC-----ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCc
Q 010388          415 PNEFYPERFIGKSID-----VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGL  489 (512)
Q Consensus       415 p~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~  489 (512)
                      |++|+||||++....     ...+...++|||.|+|.|+|++||++|+++++++|+++|+|++.++.   +++.....++
T Consensus       425 p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~~~~~~~~~~  501 (519)
T PLN00168        425 PMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGD---EVDFAEKREF  501 (519)
T ss_pred             ccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCC---cCChhhhcee
Confidence            999999999964211     11234579999999999999999999999999999999999997652   2333322344


Q ss_pred             cccCCCCceEEeccCCC
Q 010388          490 STPRKFPLEVLAHPRLS  506 (512)
Q Consensus       490 ~~~~~~~~~~~~~~r~~  506 (512)
                      +..++.++++++++|+.
T Consensus       502 ~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        502 TTVMAKPLRARLVPRRT  518 (519)
T ss_pred             EEeecCCcEEEEEeccC
Confidence            55567789999999974


No 13 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.1e-76  Score=576.07  Aligned_cols=453  Identities=29%  Similarity=0.484  Sum_probs=360.1

Q ss_pred             CCCCCCCCCCCcccccccccCC---CCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcc
Q 010388           32 KLNLPPGPKPWPIIGNLHLIGS---LPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAG  108 (512)
Q Consensus        32 ~~~~ppgp~~~p~~G~~~~~~~---~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~  108 (512)
                      +...||||+++|++|++..+.+   ....++.++..+||++|+.++++.++++++||+.+++|+.++.......+.....
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            5678999999999999988832   4566788999999999999999999999999999999997554444333332212


Q ss_pred             cccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhc-CCCeehHHHHHHHHHHHHHHH
Q 010388          109 KYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELS-GKPIMLKDHLSDLSLAVISRM  187 (512)
Q Consensus       109 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~vdl~~~~~~~~~dvi~~~  187 (512)
                      .....| .+++++. |+.|+++||.+ .++|+.+.++.+.+.+.+.+..++..+.... ++.+|+.+.++.+++|+++.+
T Consensus       113 ~~~~lG-~gll~~~-g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~  189 (497)
T KOG0157|consen  113 LKPWLG-DGLLFSD-GEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKT  189 (497)
T ss_pred             HHHHhc-CccccCC-chHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHH
Confidence            112222 3445554 99999999997 7999999999999999999999888887753 333999999999999999999


Q ss_pred             HhCccc-cccccccccCChHHHHHHHHHHHHhhccCCCccccc-cccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010388          188 VLGKNY-TDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIP-WLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARR  265 (512)
Q Consensus       188 ~fG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (512)
                      +||... +...     ....++..++..+......   ....| +..++......++..++.+.++++++++|+++++..
T Consensus       190 ~~G~~~~~~~~-----~~~~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~  261 (497)
T KOG0157|consen  190 AMGPESLDAEG-----PELFEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREEL  261 (497)
T ss_pred             hcCCccccccC-----CcccHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999222 1121     2224555555544333221   22234 333333333577888999999999999999998765


Q ss_pred             cCCCC---CCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 010388          266 KGVEN---YVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVI  342 (512)
Q Consensus       266 ~~~~~---~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      +..+.   ....|+++.+....+     ..+++++|.+++.++++||+|||+++++|+++.|+.||++|+++++|+++++
T Consensus       262 ~~~~~~~~~~~~d~L~~~~~~~~-----~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~  336 (497)
T KOG0157|consen  262 EKEGSGEEKKRLDFLDTLLLEED-----KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEIL  336 (497)
T ss_pred             HhcCCcccchhhhHHHHHHHhcc-----CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence            43221   345688886333221     4789999999999999999999999999999999999999999999999999


Q ss_pred             cCCCc-ccccccCCCchhHHHHHhhhcCCCCCccccccccccceee-cCeeeCCCCEEEeehhhcccCCCCCC-CCCCCC
Q 010388          343 GKERW-VEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV-AGYDIPKGTRVLVSVWAIGRHPSLWE-KPNEFY  419 (512)
Q Consensus       343 ~~~~~-~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d~~~~~-dp~~F~  419 (512)
                      +.... ++....++|+||++||+||||||||+|... |.+.+|+++ +||.||||+.|.++++.+|||+.+|+ ||++||
T Consensus       337 ~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~-R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~  415 (497)
T KOG0157|consen  337 GNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVA-RKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFD  415 (497)
T ss_pred             CCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhh-cccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcC
Confidence            75332 233333369999999999999999999986 999999999 58999999999999999999999995 999999


Q ss_pred             CCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceE
Q 010388          420 PERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEV  499 (512)
Q Consensus       420 P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (512)
                      ||||+++......++++|+|||+|+|.|+|++||++|||+++++|+++|+++++.+.   .  .......+..++++++|
T Consensus       416 PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~---~--~~~~~~~~l~~~~gl~v  490 (497)
T KOG0157|consen  416 PERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGD---K--PKPVPELTLRPKNGLKV  490 (497)
T ss_pred             ccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCC---C--ceeeeEEEEEecCCeEE
Confidence            999997554434567899999999999999999999999999999999999988662   1  33446788899999999


Q ss_pred             EeccCCC
Q 010388          500 LAHPRLS  506 (512)
Q Consensus       500 ~~~~r~~  506 (512)
                      +++||.+
T Consensus       491 ~~~~r~~  497 (497)
T KOG0157|consen  491 KLRPRGS  497 (497)
T ss_pred             EEEeCCC
Confidence            9999974


No 14 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4e-76  Score=536.13  Aligned_cols=455  Identities=24%  Similarity=0.341  Sum_probs=384.6

Q ss_pred             CCCCCCCCCCCccccccccc----CCCCcHHHHHHHHhhCCeEEEe-ecCccEEEecCHHHHHHHHHhCCccccCCC-Cc
Q 010388           32 KLNLPPGPKPWPIIGNLHLI----GSLPHRSVHALSEKYGPIMQLK-FGSFPVVVGSSVEMAKVVLKTHDVLFAGRP-KT  105 (512)
Q Consensus        32 ~~~~ppgp~~~p~~G~~~~~----~~~~~~~~~~~~~kyG~v~~~~-~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~-~~  105 (512)
                      +...+|||+++|++|.....    ..+.++.....+++||+||+.. +|+...|.+.+|++++.++++++. .+.++ ..
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~  126 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI  126 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence            34578999999999998733    3556888889999999999999 899999999999999999997753 34453 11


Q ss_pred             Ccc--cccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhc-----CCCeehHHHHHH
Q 010388          106 AAG--KYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELS-----GKPIMLKDHLSD  178 (512)
Q Consensus       106 ~~~--~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-----~~~vdl~~~~~~  178 (512)
                      ...  ..-.++...+++..+|+.|.+.|..+....++++.++.|.|.+++.+++++..+....     ..+.|+.+.+..
T Consensus       127 ~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  127 EPWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             chhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence            111  1123445667888899999999999988889999999999999999999999998762     237899999999


Q ss_pred             HHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHH
Q 010388          179 LSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVL  258 (512)
Q Consensus       179 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i  258 (512)
                      ++++.||.++||.+++..... ..++.+.+.+++..++.....+.   +.|-++.+..++.++++.++.+.+.+++.+.|
T Consensus       207 wslEsi~~V~l~~rlG~L~~~-~~~~a~~fi~ai~~~F~~s~~l~---~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~I  282 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGES-PPSEAQQFIDAIKKMFESSAQLM---LMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYI  282 (519)
T ss_pred             HHHHHHHHHHHhcccccccCC-CCHHHHHHHHHHHHHHHhHHHHH---hcchHHHhCCChHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987643 44566888899998888766543   34544444556778999999999999999999


Q ss_pred             HHHHHHhcCCCCC--CcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHH
Q 010388          259 DEHNARRKGVENY--VAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIE  336 (512)
Q Consensus       259 ~~~~~~~~~~~~~--~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~  336 (512)
                      ++..++.+..+..  +..+.+-.++.       ...++.+++..++++++.||.|||+.+++|+||+|++||++|++|++
T Consensus       283 d~~l~~l~~~~~~~~~~~~~l~~~L~-------~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~  355 (519)
T KOG0159|consen  283 DNALEELEKQDSAGSEYTGSLLELLL-------RKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLRE  355 (519)
T ss_pred             HHHHHHHHhccccccchhHHHHHHHH-------HccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHH
Confidence            9998887643321  22333333333       23577899999999999999999999999999999999999999999


Q ss_pred             HHHHHhcC-CCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCC
Q 010388          337 ELDRVIGK-ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKP  415 (512)
Q Consensus       337 Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp  415 (512)
                      |+.+++.+ +..++.+++.+||||.||||||+||||.+++.. |+..+|.+++||.|||||.|.++++.+.+||++|++|
T Consensus       356 Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~-R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p  434 (519)
T KOG0159|consen  356 EILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNG-RVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDP  434 (519)
T ss_pred             HHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccc-cccchhceeccceecCCCeEEEeehhhccChhhCCCc
Confidence            99999987 678999999999999999999999999999987 9999999999999999999999999999999999999


Q ss_pred             CCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCC
Q 010388          416 NEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKF  495 (512)
Q Consensus       416 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (512)
                      ++|+|||||+++. ...+++.++|||.|+|+|+||+||.+||.++||.++++|+++..++   .  +......+.+.|..
T Consensus       435 ~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~---~--pv~~~~~~il~P~~  508 (519)
T KOG0159|consen  435 EEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHE---E--PVEYVYRFILVPNR  508 (519)
T ss_pred             cccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCC---C--CccceeEEEEcCCC
Confidence            9999999998763 3458999999999999999999999999999999999999999865   2  44444667888999


Q ss_pred             CceEEeccCC
Q 010388          496 PLEVLAHPRL  505 (512)
Q Consensus       496 ~~~~~~~~r~  505 (512)
                      ++.+++++|+
T Consensus       509 ~l~f~f~~r~  518 (519)
T KOG0159|consen  509 PLRFKFRPRN  518 (519)
T ss_pred             CcceeeeeCC
Confidence            9999999986


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.1e-75  Score=566.10  Aligned_cols=457  Identities=27%  Similarity=0.463  Sum_probs=362.6

Q ss_pred             CCCCCCCcccccccccC-CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccccC
Q 010388           36 PPGPKPWPIIGNLHLIG-SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTTFN  114 (512)
Q Consensus        36 ppgp~~~p~~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  114 (512)
                      ||||+++|++|+++.+. .+++..+.+|+++||++|++++++.++|+|+||+++++++.++...|..++..........+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            78999999999998884 45889999999999999999999999999999999999999887777766543222222211


Q ss_pred             CcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh----cCCCeehHHHHHHHHHHHHHHHHhC
Q 010388          115 YSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL----SGKPIMLKDHLSDLSLAVISRMVLG  190 (512)
Q Consensus       115 ~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~----~~~~vdl~~~~~~~~~dvi~~~~fG  190 (512)
                      .....+..+|+.|+++||.+.+++++...++.+.+.+.+.++.+++.+.+.    .++++|+.+.++.+++|+++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            222334446999999999877788988888888898888888888887643    3678999999999999999999999


Q ss_pred             ccccccccccccCC---hHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010388          191 KNYTDKQQENEIVT---PQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKG  267 (512)
Q Consensus       191 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (512)
                      .+++..........   ...+...............+...+|++.+++.....+...+....+.++++.++++++++...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            98765431111100   122333444444433333334466766655433333334444455667888888877765422


Q ss_pred             CCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCc
Q 010388          268 VENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERW  347 (512)
Q Consensus       268 ~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~  347 (512)
                        .....|+++.++...      ..++++++.+++.++++||+|||+++++|++++|++||++|+++++||+.+++.+. 
T Consensus       241 --~~~~~d~l~~ll~~~------~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-  311 (466)
T PLN02655        241 --GEERDCYLDFLLSEA------THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-  311 (466)
T ss_pred             --CCCcccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-
Confidence              123468999999753      25889999999999999999999999999999999999999999999999988754 


Q ss_pred             ccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCC
Q 010388          348 VEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKS  427 (512)
Q Consensus       348 ~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~  427 (512)
                      ++.+++++||||+|||+||||++|+++...+|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++..
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999988789999999999999999999999999999999999999999999999654


Q ss_pred             CCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccCCC
Q 010388          428 IDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLS  506 (512)
Q Consensus       428 ~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~  506 (512)
                      ... .....++|||+|+|.|+|++||++|+++++++||++|++++.++.. ..   ....+++..+++++++++++|.+
T Consensus       392 ~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~r~~  465 (466)
T PLN02655        392 YES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EK---EDTVQLTTQKLHPLHAHLKPRGS  465 (466)
T ss_pred             ccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cc---cchhheeEeecCCcEEEEeecCC
Confidence            221 2346899999999999999999999999999999999999976531 11   22346667788899999999975


No 16 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=4e-75  Score=575.88  Aligned_cols=452  Identities=22%  Similarity=0.357  Sum_probs=354.6

Q ss_pred             CCCCCCCCCCCcccccccccC-------------------CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHH
Q 010388           32 KLNLPPGPKPWPIIGNLHLIG-------------------SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVL   92 (512)
Q Consensus        32 ~~~~ppgp~~~p~~G~~~~~~-------------------~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~   92 (512)
                      +.+.||||+++|++||++.+.                   ......+.+|+++||++|++++|+.++|+++||+++++++
T Consensus        40 ~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il  119 (516)
T PLN02290         40 ERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELL  119 (516)
T ss_pred             HHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHH
Confidence            456899999999999987763                   1233356889999999999999999999999999999999


Q ss_pred             HhCCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cC-CC
Q 010388           93 KTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SG-KP  169 (512)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~-~~  169 (512)
                      .++.. +..++...........+ ..++..+|+.|+++|+.+ .+.|+.++++.+.+.+.++++++++.|.+.  .+ ++
T Consensus       120 ~~~~~-~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~  196 (516)
T PLN02290        120 TKYNT-VTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTE  196 (516)
T ss_pred             hcCCC-CCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence            87632 33333221111111111 235667899999999997 799999999999999999999999999763  23 47


Q ss_pred             eehHHHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHH
Q 010388          170 IMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKK  249 (512)
Q Consensus       170 vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~  249 (512)
                      +|+.++++.+++|++++++||.+++..         +++...+..+............+|++.+++ ....+...+..+.
T Consensus       197 vd~~~~~~~~~~~vi~~~~fG~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~~~~~~~  266 (516)
T PLN02290        197 VEIGEYMTRLTADIISRTEFDSSYEKG---------KQIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREIKSLKGE  266 (516)
T ss_pred             EEhHHHHHHHHHHHHHHHHcCCccccc---------hHHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHHHHHHHH
Confidence            999999999999999999999987532         223333333322211111112244443332 2334456667788


Q ss_pred             HHHHHHHHHHHHHHHhcCC-CCCCcCcHHHHHHhhcCCCC-cccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhC
Q 010388          250 FDKFLEHVLDEHNARRKGV-ENYVAKDMVDVLLQLADDPS-LEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKK  327 (512)
Q Consensus       250 ~~~~~~~~i~~~~~~~~~~-~~~~~~dll~~ll~~~~~~~-~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  327 (512)
                      +.+++.+.++++++..+.. ++....|+++.++++..+.. .+..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       267 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        267 VERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            8899999998887654321 11235799999998654221 123578999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhccc
Q 010388          328 PEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGR  407 (512)
Q Consensus       328 p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~  407 (512)
                      |++|+|+++||+++++.+ .++.+++++||||+|||+||||++|+++. .+|.+.+|++++||.|||||.|+++.+++||
T Consensus       347 P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~r  424 (516)
T PLN02290        347 PTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKLGDLHIPKGLSIWIPVLAIHH  424 (516)
T ss_pred             HHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeECCEEECCCCEEEecHHHhcC
Confidence            999999999999999864 78999999999999999999999999986 4799999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccc
Q 010388          408 HPSLW-EKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEI  486 (512)
Q Consensus       408 d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~  486 (512)
                      ||++| +||++||||||++.+.   .....++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +  ....
T Consensus       425 dp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~---~--~~~~  496 (516)
T PLN02290        425 SEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNY---R--HAPV  496 (516)
T ss_pred             ChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCc---c--cCcc
Confidence            99999 8999999999995321   133579999999999999999999999999999999999987652   1  1112


Q ss_pred             cCccccCCCCceEEeccCCC
Q 010388          487 FGLSTPRKFPLEVLAHPRLS  506 (512)
Q Consensus       487 ~~~~~~~~~~~~~~~~~r~~  506 (512)
                      .+++..|++++++++++|+.
T Consensus       497 ~~~~~~p~~~~~~~~~~~~~  516 (516)
T PLN02290        497 VVLTIKPKYGVQVCLKPLNP  516 (516)
T ss_pred             ceeeecCCCCCeEEEEeCCC
Confidence            35678889999999999974


No 17 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2e-74  Score=566.59  Aligned_cols=465  Identities=20%  Similarity=0.325  Sum_probs=349.5

Q ss_pred             CcccchHHHHHHHHHHHH-HHHHHHHH-HhcCCCCCCCCCCCCcccccccccC-----CCCcHHHHHHHHhhCCeEEEee
Q 010388            2 ELIHPSWVSYLTAWLATL-ALVLLSVR-LRRRKLNLPPGPKPWPIIGNLHLIG-----SLPHRSVHALSEKYGPIMQLKF   74 (512)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~   74 (512)
                      -+++.+...+++.++++. ++++++++ ..+++.+.||||+++|++|++..+.     +.++.++.+++++||++|++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~   83 (490)
T PLN02500          4 MMSHTELLLFLLPSILSLLLVFILTKRRPKQKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNL   83 (490)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhCccccccCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccc
Confidence            344444444444433322 23323333 2345567899999999999976541     3456778999999999999999


Q ss_pred             cCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhh-hHHHHHH
Q 010388           75 GSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLES-FEYIRVQ  153 (512)
Q Consensus        75 ~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~  153 (512)
                      ++.++|+++||+++++++.+++..|..+.........  + ...++..+|+.|+++|+.+ .+.|+...++. +.+.+.+
T Consensus        84 g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~~~~~--g-~~~~~~~~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~  159 (490)
T PLN02500         84 FGEPTIVSADAGLNRFILQNEGRLFECSYPRSIGGIL--G-KWSMLVLVGDMHRDMRSIS-LNFLSHARLRTHLLKEVER  159 (490)
T ss_pred             cCCCeEEecCHHHHHHHHhCCCCeEEeeCchHHHHHh--C-cccccccCCHHHHHHHHHH-HHhcChHHHHHHHHHHHHH
Confidence            9999999999999999998776655433211111111  2 1234555799999999998 68999988887 5678888


Q ss_pred             HHHHHHHHHHhhcCCCeehHHHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccc
Q 010388          154 ELKLLLSRLYELSGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGF  233 (512)
Q Consensus       154 ~~~~~~~~l~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~  233 (512)
                      .+..+++.|..  ++++|+.+.++.+++|++++++||.+.+..+       ..++............  .....+|..  
T Consensus       160 ~~~~~~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fg~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~p~~--  226 (490)
T PLN02500        160 HTLLVLDSWKE--NSTFSAQDEAKKFTFNLMAKHIMSMDPGEEE-------TEQLKKEYVTFMKGVV--SAPLNFPGT--  226 (490)
T ss_pred             HHHHHHHHhCC--CCCEEehHHHHHHHHHHHHHHHhCCCCCchH-------HHHHHHHHHHHHhhhh--cchhcCCCc--
Confidence            88888887754  5679999999999999999999998764321       1222222222221110  001112211  


Q ss_pred             cCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccc
Q 010388          234 LDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVE-NYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTES  312 (512)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~t  312 (512)
                           ..++..+..+.+.+++.+.++++++..+..+ .....|+++.+++.       ..++++++++++.++++||+||
T Consensus       227 -----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~~~ll~AG~dT  294 (490)
T PLN02500        227 -----AYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLILSLLFAGHET  294 (490)
T ss_pred             -----ccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhH
Confidence                 1234556678888889999988776542211 12346999999873       2488999999999999999999


Q ss_pred             hHHHHHHHHHHHhhChHHHHHHHHHHHHHhc-----CCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceee
Q 010388          313 SAVTVEWAISELIKKPEIFEKAIEELDRVIG-----KERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV  387 (512)
Q Consensus       313 t~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l  387 (512)
                      |+++++|++++|++||++|+|+++|++++++     ++..++.+++++||||+|||+||||++|+++.. +|.+.+|+++
T Consensus       295 ta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~-~R~~~~d~~~  373 (490)
T PLN02500        295 SSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL-HRKALKDVRY  373 (490)
T ss_pred             HHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe-eeEeCCCcee
Confidence            9999999999999999999999999999863     234589999999999999999999999999986 5999999999


Q ss_pred             cCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCcc------CCccceecccCCCCCCCChhhHHHHHHHHH
Q 010388          388 AGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVK------GHDFELLPFGAGRRMCPGYSLGLKVIQASL  461 (512)
Q Consensus       388 ~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  461 (512)
                      +||.|||||.|+++.+++||||++|+||++||||||++++.+..      .++.+++|||.|+|.|+|++||++|+++++
T Consensus       374 ~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~l  453 (490)
T PLN02500        374 KGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFI  453 (490)
T ss_pred             CCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999996432211      245689999999999999999999999999


Q ss_pred             HHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEecc
Q 010388          462 ANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHP  503 (512)
Q Consensus       462 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (512)
                      ++|+++|++++.++.   + ...  .... .++.++.+++++
T Consensus       454 a~ll~~f~~~~~~~~---~-~~~--~~~~-~~~~~l~~~~~~  488 (490)
T PLN02500        454 HHLVLNFNWELAEAD---Q-AFA--FPFV-DFPKGLPIRVRR  488 (490)
T ss_pred             HHHHhccEEEEcCCC---c-cee--cccc-cCCCCceEEEEe
Confidence            999999999987652   1 111  1222 334688888875


No 18 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=7e-73  Score=555.25  Aligned_cols=468  Identities=28%  Similarity=0.479  Sum_probs=352.2

Q ss_pred             CCCCCCCCCcccccccccC-CCCc-HHHHHHHHhh-CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccc
Q 010388           34 NLPPGPKPWPIIGNLHLIG-SLPH-RSVHALSEKY-GPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKY  110 (512)
Q Consensus        34 ~~ppgp~~~p~~G~~~~~~-~~~~-~~~~~~~~ky-G~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~  110 (512)
                      +.||||+++|++|+++.+. ..+. .++.++.++| |+||++++|+.++|+|+||+++++++.+++..|..++.......
T Consensus        40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~  119 (534)
T PLN03018         40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET  119 (534)
T ss_pred             CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence            3689999999999998873 2333 4566777776 79999999999999999999999999987777877765433332


Q ss_pred             cccCCcceEeCCCChhHHHHHHHHHhhhc-chhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHHHH
Q 010388          111 TTFNYSDITWSPYGPYWRQARKMCLMELF-SAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVISRM  187 (512)
Q Consensus       111 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~~~  187 (512)
                      .+.+..++.+..+|+.|+++|+.+ ++.| +......+.+....+++++++.+.+.  .++++|+.+.++.+++|+++++
T Consensus       120 l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        120 IGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            333323456666799999999998 4554 55555556666667788999998753  4567999999999999999999


Q ss_pred             HhCccccccccc--cccCChHHHHHHHHHHHHhhc---cCCCccccc-cccccCccchHHHHHHHHHHHHHHHHHHHHHH
Q 010388          188 VLGKNYTDKQQE--NEIVTPQEFKAMLDELFLLNG---VLDIGDSIP-WLGFLDLQGNIKRMKALAKKFDKFLEHVLDEH  261 (512)
Q Consensus       188 ~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  261 (512)
                      +||.+++.....  ........+............   .....+.+| |+.++...+...+.....+.+.++++++++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998542210  000111112222222222111   111112233 44322112223445555677888889999888


Q ss_pred             HHHhcCCCC-CCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 010388          262 NARRKGVEN-YVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDR  340 (512)
Q Consensus       262 ~~~~~~~~~-~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  340 (512)
                      ++..+...+ ....|+++.++++.++.+ ...++++++++++..+++||+|||+++++|++++|+.||++|+++++||++
T Consensus       279 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~-~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~  357 (534)
T PLN03018        279 VELWREKGGKAAVEDWLDTFITLKDQNG-KYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDE  357 (534)
T ss_pred             HHHhhhccCCCCcccHHHHHHHhhcccC-CCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence            764321111 224699999998654321 114899999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCC
Q 010388          341 VIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYP  420 (512)
Q Consensus       341 ~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P  420 (512)
                      +++.++.++.+++.+||||+|||+||||++|+++...+|++.+|++++||.||||+.|+++.+++||||++|+||++|+|
T Consensus       358 v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~P  437 (534)
T PLN03018        358 VVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEP  437 (534)
T ss_pred             HhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccccCC
Confidence            99877778999999999999999999999999998767999999999999999999999999999999999999999999


Q ss_pred             CcccCCCCCc-----cCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCC
Q 010388          421 ERFIGKSIDV-----KGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKF  495 (512)
Q Consensus       421 ~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (512)
                      |||++.+++.     ...+..++|||+|+|.|+|++||++|+++++++|+++|++++.++.  .+++.....+.+.. +.
T Consensus       438 eRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~-p~  514 (534)
T PLN03018        438 ERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM-AK  514 (534)
T ss_pred             ccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCC--CCCCccccccceec-CC
Confidence            9999643221     1245689999999999999999999999999999999999987542  13333223344443 46


Q ss_pred             CceEEeccCCC
Q 010388          496 PLEVLAHPRLS  506 (512)
Q Consensus       496 ~~~~~~~~r~~  506 (512)
                      ++++++++|..
T Consensus       515 ~~~v~~~~R~~  525 (534)
T PLN03018        515 PLLLSVEPRLA  525 (534)
T ss_pred             CeEEEEEeccc
Confidence            99999999943


No 19 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.7e-73  Score=555.41  Aligned_cols=453  Identities=22%  Similarity=0.308  Sum_probs=352.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHH
Q 010388            9 VSYLTAWLATLALVLLSVRLRRRKLNLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMA   88 (512)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~   88 (512)
                      .++++..+..+.+++++..+++++.+.||||+++|++|++..+.+++..++.+++++||++|++++++.++++++||+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~   85 (463)
T PLN02774          6 LGVLVIIVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELN   85 (463)
T ss_pred             hhHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHH
Confidence            34444444444455554555556667889999999999998886678889999999999999999999999999999999


Q ss_pred             HHHHHhCCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhh-hHHHHHHHHHHHHHHHHhhcC
Q 010388           89 KVVLKTHDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLES-FEYIRVQELKLLLSRLYELSG  167 (512)
Q Consensus        89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~  167 (512)
                      ++++.++...+..+........  .+ .+.+++.+|+.|+++|+.+ .+.|++..++. +.+.+.+.++++++.|..  +
T Consensus        86 ~~il~~~~~~~~~~~~~~~~~~--lg-~~~~~~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  159 (463)
T PLN02774         86 RYILMNEGKGLVPGYPQSMLDI--LG-TCNIAAVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWDG--L  159 (463)
T ss_pred             HHHHcCCCCeEEecCCHHHHHH--hC-ccchhhcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhCC--C
Confidence            9999876655533221111111  22 2345566899999999998 68999998886 789999989999888764  5


Q ss_pred             CCeehHHHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHH
Q 010388          168 KPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALA  247 (512)
Q Consensus       168 ~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~  247 (512)
                      +++|+.+.+..+++++++.++||...+...        .++...+..+..  ...    .+|.  +++ ....++..++.
T Consensus       160 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~--------~~~~~~~~~~~~--~~~----~~~~--~lp-~~~~~~~~~~~  222 (463)
T PLN02774        160 KTIDIQEKTKEMALLSALKQIAGTLSKPIS--------EEFKTEFFKLVL--GTL----SLPI--DLP-GTNYRSGVQAR  222 (463)
T ss_pred             CCEEeeHHHHHHHHHHHHHHHcCCCChHHH--------HHHHHHHHHHhc--ccc----cCCc--CCC-ChhhhHHHHHH
Confidence            679999999999999999999997653211        222222222111  111    1121  111 11234555677


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhC
Q 010388          248 KKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKK  327 (512)
Q Consensus       248 ~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~  327 (512)
                      +.+.+++.+.++++++..     ....|+++.++....+   +..++++++.+++.++++||+|||+++++|++++|++|
T Consensus       223 ~~~~~~~~~~i~~r~~~~-----~~~~d~l~~ll~~~~~---~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~  294 (463)
T PLN02774        223 KNIVRMLRQLIQERRASG-----ETHTDMLGYLMRKEGN---RYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDH  294 (463)
T ss_pred             HHHHHHHHHHHHHHHhcC-----CCcccHHHHHHhCccC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC
Confidence            888888888888876432     2347999999974322   23589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcC---CCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhh
Q 010388          328 PEIFEKAIEELDRVIGK---ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWA  404 (512)
Q Consensus       328 p~~~~~l~~Ei~~~~~~---~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~  404 (512)
                      |++|+|+++|++++++.   +..++++++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|+++++.
T Consensus       295 P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~-~R~~~~d~~l~g~~IpkGt~v~~~~~~  373 (463)
T PLN02774        295 PKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV-LRKTTQDMELNGYVIPKGWRIYVYTRE  373 (463)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc-ccccCCCeeECCEEECCCCEEEEehHH
Confidence            99999999999999863   35688999999999999999999999999876 499999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcc
Q 010388          405 IGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNME  484 (512)
Q Consensus       405 ~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~  484 (512)
                      +||||++|+||++|+||||++++.  .. ...++|||+|+|.|+|++||++|++++++.|+++|++++.++.   +..  
T Consensus       374 ~~rdp~~~~dP~~F~PeRfl~~~~--~~-~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~---~~~--  445 (463)
T PLN02774        374 INYDPFLYPDPMTFNPWRWLDKSL--ES-HNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGD---KLM--  445 (463)
T ss_pred             hcCCcccCCChhccCchhcCCCCc--CC-CccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCC---ccc--
Confidence            999999999999999999996432  11 2368999999999999999999999999999999999997653   211  


Q ss_pred             cccCccccCCCCceEEecc
Q 010388          485 EIFGLSTPRKFPLEVLAHP  503 (512)
Q Consensus       485 ~~~~~~~~~~~~~~~~~~~  503 (512)
                      . +. ...|++++++++++
T Consensus       446 ~-~~-~~~p~~g~~~~~~~  462 (463)
T PLN02774        446 K-FP-RVEAPNGLHIRVSP  462 (463)
T ss_pred             c-CC-CCCCCCCceEEeee
Confidence            1 11 23367899999874


No 20 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=5.6e-73  Score=560.05  Aligned_cols=454  Identities=20%  Similarity=0.282  Sum_probs=341.3

Q ss_pred             CCCCCCCCCcccccccccCCCCcHHHHHHHHhh---CCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccc
Q 010388           34 NLPPGPKPWPIIGNLHLIGSLPHRSVHALSEKY---GPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKY  110 (512)
Q Consensus        34 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~ky---G~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~  110 (512)
                      +.+|||+++|++|+++.+..+ +..+.++.++|   |++|++++++.++++++||+++++|+.++...+...........
T Consensus        30 ~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~  108 (516)
T PLN03195         30 RNRKGPKSWPIIGAALEQLKN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME  108 (516)
T ss_pred             cccCCCCCCCeecchHHHHhc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence            357899999999998765333 44567777777   89999999999999999999999999865444443321110000


Q ss_pred             cccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHH-HHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHHHH
Q 010388          111 TTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIR-VQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVISRM  187 (512)
Q Consensus       111 ~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~~~  187 (512)
                      ...+  ..+++.+|+.|+++||.+ ++.|+.++++.+.+.+ .+.++.+++.+.+.  .++++|+.++++.+++|+++.+
T Consensus       109 ~~~g--~~l~~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        109 VLLG--DGIFNVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHhc--CeeeccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            1112  235667899999999997 7999999999999876 56677777777642  4667999999999999999999


Q ss_pred             HhCccccccccccccCChHHHHHHHHHHHHhhccCCCcccccc--ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010388          188 VLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPW--LGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARR  265 (512)
Q Consensus       188 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (512)
                      +||.+++..+.+.   ....+...++........   ....|+  +.........+...+..+.+.+++.+.++++++..
T Consensus       186 ~fG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (516)
T PLN03195        186 GFGVEIGTLSPSL---PENPFAQAFDTANIIVTL---RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEM  259 (516)
T ss_pred             HhCCCccccccCC---CccHHHHHHHHHHHHHHH---HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999886543110   112333333332211100   001121  11111112233445667788888999998887653


Q ss_pred             cCC---CCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 010388          266 KGV---ENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVI  342 (512)
Q Consensus       266 ~~~---~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      ...   ......|+++.++++.++.  +..++++++++++..+++||+|||+++++|++++|++||++|+||++|+++++
T Consensus       260 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~  337 (516)
T PLN03195        260 DEARKSGKKVKHDILSRFIELGEDP--DSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALE  337 (516)
T ss_pred             hccccccccccccHHHHHHhccCCC--CCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhh
Confidence            211   0123569999999765432  34689999999999999999999999999999999999999999999999876


Q ss_pred             cC--------------------CCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceee-cCeeeCCCCEEEee
Q 010388          343 GK--------------------ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV-AGYDIPKGTRVLVS  401 (512)
Q Consensus       343 ~~--------------------~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~  401 (512)
                      +.                    ++.++.+++++||||+|||+||||++|+++... |.+.+|.++ +|+.|||||.|+++
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~  416 (516)
T PLN03195        338 KERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYV  416 (516)
T ss_pred             hcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEe
Confidence            43                    235788999999999999999999999999985 767666555 99999999999999


Q ss_pred             hhhcccCCCCC-CCCCCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcC
Q 010388          402 VWAIGRHPSLW-EKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEE  480 (512)
Q Consensus       402 ~~~~~~d~~~~-~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~  480 (512)
                      ++++||||++| +||++|+||||++++......+..++|||.|+|.|+|++||++|++++++.|+++|++++.++.   +
T Consensus       417 ~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~  493 (516)
T PLN03195        417 PYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---P  493 (516)
T ss_pred             hHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---c
Confidence            99999999999 9999999999996432122345679999999999999999999999999999999999987542   2


Q ss_pred             CCcccccCccccCCCCceEEeccCC
Q 010388          481 LNMEEIFGLSTPRKFPLEVLAHPRL  505 (512)
Q Consensus       481 ~~~~~~~~~~~~~~~~~~~~~~~r~  505 (512)
                      ...  ....+..|+.+++|++++|.
T Consensus       494 ~~~--~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        494 VKY--RMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             cee--eeeeEEecCCCEEEEEEeCC
Confidence            222  23345668889999999984


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1e-73  Score=564.84  Aligned_cols=454  Identities=34%  Similarity=0.574  Sum_probs=363.9

Q ss_pred             CCCCCCCcccccccccC--CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccc-cc
Q 010388           36 PPGPKPWPIIGNLHLIG--SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKY-TT  112 (512)
Q Consensus        36 ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~-~~  112 (512)
                      ||||+++|++|++..+.  +++++.+.+++++||+||+++++++++++|+||+++++|+..+...+..++....... ..
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            79999999999999985  6788889999999999999999999999999999999999987666655433222221 11


Q ss_pred             cCCcceEeCCCChhHHHHHHHHHhhhcchh-HhhhhHHHHHHHHHHHHHHHHhhcCC--CeehHHHHHHHHHHHHHHHHh
Q 010388          113 FNYSDITWSPYGPYWRQARKMCLMELFSAK-RLESFEYIRVQELKLLLSRLYELSGK--PIMLKDHLSDLSLAVISRMVL  189 (512)
Q Consensus       113 ~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~--~vdl~~~~~~~~~dvi~~~~f  189 (512)
                      ......++..+|+.|+.+|+.+ .+.|+.. .+ .+.+.+.+.++.+++.|.+..+.  .+|+.++++.+++|+++.++|
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~f  158 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLF  158 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeecccccccccccccccc
Confidence            1122345566689999999998 6778877 66 89999999999999999986333  599999999999999999999


Q ss_pred             CccccccccccccCChHHHHHHHHHHHHhhcc--CCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010388          190 GKNYTDKQQENEIVTPQEFKAMLDELFLLNGV--LDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKG  267 (512)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  267 (512)
                      |.+++..+.    ....++..+...+......  ......+|++.+++ ....+...+..+.+.+++.+.++++++..+.
T Consensus       159 G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  233 (463)
T PF00067_consen  159 GKDFGSLDD----EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLP-TPLFRRFKRARDRLRKYIKEIIEERREELDD  233 (463)
T ss_dssp             SSHHHGTTH----HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHS
T ss_pred             cceeeeccc----ccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence            999874331    1113455555555433211  12233456554443 3456667777889999999999998887753


Q ss_pred             CCCCCcCcHHHHHHhhc-CCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCC
Q 010388          268 VENYVAKDMVDVLLQLA-DDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKER  346 (512)
Q Consensus       268 ~~~~~~~dll~~ll~~~-~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~  346 (512)
                      . .....|+++.++.+. +.++ +..++++++++++..+++||+|||+.+++|++++|++||++|++|++||+++.+++.
T Consensus       234 ~-~~~~~d~l~~ll~~~~~~~~-~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~  311 (463)
T PF00067_consen  234 G-DESRRDLLDSLLQASSDSDG-PSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGR  311 (463)
T ss_dssp             S-SSSCSSHHHHHHHHHHTTTT-TSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSS
T ss_pred             c-cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            2 245789999999986 3321 247999999999999999999999999999999999999999999999999998777


Q ss_pred             cccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCC
Q 010388          347 WVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGK  426 (512)
Q Consensus       347 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  426 (512)
                      .++.+++++||||+|||+||||++|+++..++|++.+|++++||.||||+.|+++.+.+|+||++|+||++|+||||++.
T Consensus       312 ~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~  391 (463)
T PF00067_consen  312 EITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDE  391 (463)
T ss_dssp             SHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999996667999999999999999999999999999999999999999999999987


Q ss_pred             CCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEe
Q 010388          427 SIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLA  501 (512)
Q Consensus       427 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (512)
                      +........+++|||.|+|.|+|++||++|+++++|+||++||++++++..  +.+.....++.. |+.+++|++
T Consensus       392 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~  463 (463)
T PF00067_consen  392 RGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSE--PEPQEQQNGFLL-PPKPLKVKF  463 (463)
T ss_dssp             TSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSS--GGEEECSCSSSE-EESSSEEEE
T ss_pred             ccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCC--CCCccccCceEe-eCCCcEEeC
Confidence            653335678999999999999999999999999999999999999976531  122222224444 455777764


No 22 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=5.3e-72  Score=547.33  Aligned_cols=452  Identities=17%  Similarity=0.246  Sum_probs=338.8

Q ss_pred             CCCCCCCCCCCCcccccccccCCCCcH---HHHHHHHhhCCeEE---EeecCccEEEecCHHHHHHHHHhCCccccCCCC
Q 010388           31 RKLNLPPGPKPWPIIGNLHLIGSLPHR---SVHALSEKYGPIMQ---LKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPK  104 (512)
Q Consensus        31 ~~~~~ppgp~~~p~~G~~~~~~~~~~~---~~~~~~~kyG~v~~---~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~  104 (512)
                      ++.+..|||+++|++|++..+.++...   ++.+...+||..++   .++|+.++++|+||+++++|+.++...+.+++.
T Consensus        28 ~~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~  107 (500)
T PLN02169         28 KKPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE  107 (500)
T ss_pred             hccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence            344468899999999999776333333   33333344786655   577899999999999999999876655555432


Q ss_pred             cCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhh--hHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHH
Q 010388          105 TAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLES--FEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLS  180 (512)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~  180 (512)
                      ....  ....+ .+++..+|+.|+++||.+ ++.|+...+..  +.+.+.+.++.+++.+.+.  +++++|+.+.+..++
T Consensus       108 ~~~~--~~~~g-~gl~~~~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t  183 (500)
T PLN02169        108 FKKI--FDVLG-EGILTVDFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFM  183 (500)
T ss_pred             HHHH--HHhhc-CcccccCcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHH
Confidence            2111  11112 346666799999999998 79999887764  3466677788888888653  467899999999999


Q ss_pred             HHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccc----cCccchHHHHHHHHHHHHHHHHH
Q 010388          181 LAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGF----LDLQGNIKRMKALAKKFDKFLEH  256 (512)
Q Consensus       181 ~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~----~~~~~~~~~~~~~~~~~~~~~~~  256 (512)
                      +|++++++||.+.+..+..   ....++..+.........   ...+.|++.+    +...+..++..+..+.+.+++.+
T Consensus       184 ~dvi~~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (500)
T PLN02169        184 FDTSSILMTGYDPMSLSIE---MLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAK  257 (500)
T ss_pred             HHHHHhheeCCCccccCCC---CCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence            9999999999987543311   111234444333322111   1112232111    11223456677888999999999


Q ss_pred             HHHHHHHHhcCC-C-CCCcCcHHHHHHhhcCCC-CcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHH
Q 010388          257 VLDEHNARRKGV-E-NYVAKDMVDVLLQLADDP-SLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEK  333 (512)
Q Consensus       257 ~i~~~~~~~~~~-~-~~~~~dll~~ll~~~~~~-~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  333 (512)
                      +|+++++..... + .+...|+++.++++..+. ..+..++++++.+++.++++||+|||+++++|++++|++||++|+|
T Consensus       258 ~I~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~k  337 (500)
T PLN02169        258 IISSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAK  337 (500)
T ss_pred             HHHHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHH
Confidence            999887642211 1 112468999999864321 1122478889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCcccccccccccee-ecCeeeCCCCEEEeehhhcccCCCCC
Q 010388          334 AIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCN-VAGYDIPKGTRVLVSVWAIGRHPSLW  412 (512)
Q Consensus       334 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~-l~g~~ip~G~~v~~~~~~~~~d~~~~  412 (512)
                      +++||++++      +.+++.+||||+|||+|||||||++|... |.+.+|.+ ++|+.||||+.|++++|++||||++|
T Consensus       338 l~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~-r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w  410 (500)
T PLN02169        338 IRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNH-KAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVW  410 (500)
T ss_pred             HHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCc-eecCCCCCccCCEEECCCCEEEEcHHHhhCCcccc
Confidence            999999864      57899999999999999999999999987 77666655 59999999999999999999999999


Q ss_pred             -CCCCCCCCCcccCCCCCcc-CCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCcc
Q 010388          413 -EKPNEFYPERFIGKSIDVK-GHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLS  490 (512)
Q Consensus       413 -~dp~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  490 (512)
                       +||++||||||++++.+.. ..+.+|+|||+|+|.|+|++||++|+|+++++|+++|++++.++.   ++  ....+.+
T Consensus       411 ~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~---~~--~~~~~~~  485 (500)
T PLN02169        411 GEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGH---KI--EAIPSIL  485 (500)
T ss_pred             CCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCC---Cc--ccccceE
Confidence             8999999999996543322 236789999999999999999999999999999999999987542   22  2234567


Q ss_pred             ccCCCCceEEeccC
Q 010388          491 TPRKFPLEVLAHPR  504 (512)
Q Consensus       491 ~~~~~~~~~~~~~r  504 (512)
                      +.|++++++++++|
T Consensus       486 l~~~~gl~l~l~~~  499 (500)
T PLN02169        486 LRMKHGLKVTVTKK  499 (500)
T ss_pred             EecCCCEEEEEEeC
Confidence            78899999999987


No 23 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=7.1e-72  Score=553.50  Aligned_cols=443  Identities=21%  Similarity=0.333  Sum_probs=337.2

Q ss_pred             cccccc-CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccccCCcceEeCCCC
Q 010388           46 GNLHLI-GSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTTFNYSDITWSPYG  124 (512)
Q Consensus        46 G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  124 (512)
                      |++..+ ++..+..+.++|+||||||++++|+.++++++||+.+++|+..+...+.+++...... .. .+ ..+++.+|
T Consensus       143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~-~~-~g-~~l~~~dg  219 (633)
T PLN02738        143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILE-FV-MG-KGLIPADG  219 (633)
T ss_pred             CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHh-hc-cC-CceecCCc
Confidence            343344 4556788999999999999999999999999999999999987655555442211111 11 11 24556789


Q ss_pred             hhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHHHHHhCcccccccccccc
Q 010388          125 PYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEI  202 (512)
Q Consensus       125 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~  202 (512)
                      +.|+.+|+.+ .+.|+.+.++.+++.+.+.++.+++.|.+.  .++++|+.+.++.+++|+|+.++||.+++....+  .
T Consensus       220 e~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~--~  296 (633)
T PLN02738        220 EIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSND--T  296 (633)
T ss_pred             HHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccc--h
Confidence            9999999997 799999999999999999999999999764  5778999999999999999999999998753311  0


Q ss_pred             CChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCCcC
Q 010388          203 VTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGV--------ENYVAK  274 (512)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~~~~  274 (512)
                      .....+...+...............+|.+..++  ...++..+..+.+..+.+.+++.++...++.        ......
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~  374 (633)
T PLN02738        297 GIVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDP  374 (633)
T ss_pred             HHHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccc
Confidence            111222233322211100000001122221111  1123444455666666666666544321110        012345


Q ss_pred             cHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCcccccccC
Q 010388          275 DMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIV  354 (512)
Q Consensus       275 dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~  354 (512)
                      |+++.|++..      ..++++++.+++..+++||+|||+++++|++++|++||++|+||++|+++++++ ..++.++++
T Consensus       375 dil~~Ll~~~------~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~  447 (633)
T PLN02738        375 SILHFLLASG------DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMK  447 (633)
T ss_pred             hHHHHHHHcC------CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHc
Confidence            8999998742      258899999999999999999999999999999999999999999999999874 568999999


Q ss_pred             CCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCC--CccC
Q 010388          355 NLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSI--DVKG  432 (512)
Q Consensus       355 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~--~~~~  432 (512)
                      +||||+|||+|+|||||+++... |.+.+|.+++||.|||||.|+++.+.+||||++|+||++|+||||++++.  +...
T Consensus       448 kLPYL~AVIkEtLRL~p~~p~~~-R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~  526 (633)
T PLN02738        448 KLKYTTRVINESLRLYPQPPVLI-RRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETN  526 (633)
T ss_pred             cCHHHHHHHHHHHhcCCCccccc-eeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccC
Confidence            99999999999999999999865 99999999999999999999999999999999999999999999984321  1223


Q ss_pred             CccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccCCCCC
Q 010388          433 HDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRLSPH  508 (512)
Q Consensus       433 ~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~  508 (512)
                      ...+++|||.|+|.|+|++||++|+++++|+|+++|++++.++.  .++..  ..+.+..++.++++++++|+++-
T Consensus       527 ~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~--~~~~~--~~~~~~~p~~~l~v~l~~R~~~~  598 (633)
T PLN02738        527 QNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGA--PPVKM--TTGATIHTTEGLKMTVTRRTKPP  598 (633)
T ss_pred             CCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCC--CCccc--ccceEEeeCCCcEEEEEECCCCC
Confidence            45689999999999999999999999999999999999997653  22222  23556767889999999997753


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=5.2e-72  Score=544.47  Aligned_cols=427  Identities=22%  Similarity=0.356  Sum_probs=342.2

Q ss_pred             CCCCCCCCCCCCccccccccc-CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCccc
Q 010388           31 RKLNLPPGPKPWPIIGNLHLI-GSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGK  109 (512)
Q Consensus        31 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~  109 (512)
                      ++.+.||||+++|++|++..+ .++++.++.+++++||+++++++++.++|+++||+++++++.++...+.  +......
T Consensus        32 ~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~--~~~~~~~  109 (463)
T PLN02196         32 TKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFK--PTFPASK  109 (463)
T ss_pred             CCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccc--ccCchHH
Confidence            345678888889999998765 5788999999999999999999999999999999999999987655442  2111111


Q ss_pred             ccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhcCCCeehHHHHHHHHHHHHHHHHh
Q 010388          110 YTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELSGKPIMLKDHLSDLSLAVISRMVL  189 (512)
Q Consensus       110 ~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~dvi~~~~f  189 (512)
                      ....+ ...++..+|+.|+++|+.+ .+.|++++++.+.+.+.+.++++++.|.   ++++|+.++++.+++|+++.++|
T Consensus       110 ~~~~g-~~~l~~~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~f  184 (463)
T PLN02196        110 ERMLG-KQAIFFHQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIF  184 (463)
T ss_pred             HHHcC-cccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHc
Confidence            11122 2345667899999999998 6899999999999999999999998874   46799999999999999999999


Q ss_pred             CccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010388          190 GKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVE  269 (512)
Q Consensus       190 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (512)
                      |.+.....        ..+......+.   ...   ..+|+.  + +....++..++.+.+.+++.+.++++++..    
T Consensus       185 G~~~~~~~--------~~~~~~~~~~~---~~~---~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~----  243 (463)
T PLN02196        185 GKDEVLYR--------EDLKRCYYILE---KGY---NSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQNG----  243 (463)
T ss_pred             CCCCchHH--------HHHHHHHHHHh---cch---hccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhhcC----
Confidence            98753211        22222221111   110   112221  1 111134556677888888888888776532    


Q ss_pred             CCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcC---CC
Q 010388          270 NYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGK---ER  346 (512)
Q Consensus       270 ~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~---~~  346 (512)
                       ....|+++.+++.      +.+++++++.++++.+++||+|||+++++|++++|++||++|+++++|++++.+.   ++
T Consensus       244 -~~~~d~l~~ll~~------~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~  316 (463)
T PLN02196        244 -SSHNDLLGSFMGD------KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGE  316 (463)
T ss_pred             -CCcccHHHHHHhc------CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCC
Confidence             2356899998853      2368899999999999999999999999999999999999999999999998763   35


Q ss_pred             cccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCC
Q 010388          347 WVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGK  426 (512)
Q Consensus       347 ~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  426 (512)
                      .++.+++++||||+|||+||||++|+++... |.+.+|++++||.||||+.|+++++++||||++|+||++|+||||++.
T Consensus       317 ~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~-R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~  395 (463)
T PLN02196        317 SLTWEDTKKMPLTSRVIQETLRVASILSFTF-REAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVA  395 (463)
T ss_pred             CCCHHHHhcChHHHHHHHHHHhcCCCccccc-eeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCC
Confidence            6889999999999999999999999999876 999999999999999999999999999999999999999999999963


Q ss_pred             CCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccC
Q 010388          427 SIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR  504 (512)
Q Consensus       427 ~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (512)
                      .     .+.+++|||.|+|.|+|++||++|+++++++|+++|++++.++.    .+..  ...+..|+.++.|++++.
T Consensus       396 ~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        396 P-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS----NGIQ--YGPFALPQNGLPIALSRK  462 (463)
T ss_pred             C-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC----CceE--EcccccCCCCceEEEecC
Confidence            2     34689999999999999999999999999999999999987541    2232  233445888999998875


No 25 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=5.7e-72  Score=495.79  Aligned_cols=444  Identities=23%  Similarity=0.346  Sum_probs=359.1

Q ss_pred             CCCCCCCCC-cccccccccCCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccc
Q 010388           34 NLPPGPKPW-PIIGNLHLIGSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTT  112 (512)
Q Consensus        34 ~~ppgp~~~-p~~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~  112 (512)
                      ..||.-++| |++|++..|+++|.++++++++|||+||++.++|+.+.++.+|+....+++.+...++............
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v  110 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV  110 (486)
T ss_pred             CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence            588888775 9999999999999999999999999999999999999999999999999987643333222222222333


Q ss_pred             cCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHH-HHhhcCCCeehHHHHHHHHHHHHHHHHhCc
Q 010388          113 FNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSR-LYELSGKPIMLKDHLSDLSLAVISRMVLGK  191 (512)
Q Consensus       113 ~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~vdl~~~~~~~~~dvi~~~~fG~  191 (512)
                      ++ .+.+....+....++.+++ ...+...+++++++.|.+++++.+.. |.+ +|....+.+.+..+.+.+.-.++||+
T Consensus       111 Fg-~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~e  187 (486)
T KOG0684|consen  111 FG-KGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGGE  187 (486)
T ss_pred             cC-CCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhhh
Confidence            33 3345555677778888886 68889999999999999999999988 555 67778889999999999988888888


Q ss_pred             cccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010388          192 NYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENY  271 (512)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  271 (512)
                      .....+        ++......++...  +......+|.  +++... .++..++++.+.+.+...+.++++..    ..
T Consensus       188 ~r~~~d--------~~~a~l~~dLd~~--F~~~d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~----s~  250 (486)
T KOG0684|consen  188 VRDQLD--------ADVAKLYHDLDQG--FQPFDFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASI----SK  250 (486)
T ss_pred             hhhhhc--------chHHHHHHHHhcc--ccchHhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhcc----cc
Confidence            776544        2222223332221  1122334553  332233 34555888999999999999988876    24


Q ss_pred             CcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCc-ccc
Q 010388          272 VAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERW-VEE  350 (512)
Q Consensus       272 ~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~-~~~  350 (512)
                      ...|+++.+++-..+   +.+.+++|+.+..+.++|||+.||+.+.+|++++|++|||+++.+++|+.+++|.+.. ++.
T Consensus       251 ~~~dmlq~l~~~y~d---g~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~  327 (486)
T KOG0684|consen  251 WDNDMLQSLMEKYKD---GRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTY  327 (486)
T ss_pred             ccHHHHHHHHHHhhc---CCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCH
Confidence            456899999982222   5688999999999999999999999999999999999999999999999999987655 999


Q ss_pred             cccCCCchhHHHHHhhhcCCCCCccccccccccceeecC----eeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCC
Q 010388          351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAG----YDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGK  426 (512)
Q Consensus       351 ~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g----~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~  426 (512)
                      +.|++||.|++||+|||||+||.+..+ |.+.+|.++.+    |.||+|.+|.+++..+||||++|+||++|+|+||+++
T Consensus       328 d~L~~lplL~~~IkEtLRL~~p~~~~~-R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~  406 (486)
T KOG0684|consen  328 DQLKDLPLLDSCIKETLRLHPPAHSLM-RKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKD  406 (486)
T ss_pred             HHHhcchHHHHHHHHHHhcCCchhhHH-HhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCC
Confidence            999999999999999999999998887 99999999955    9999999999999999999999999999999999965


Q ss_pred             CCCc--cC--CccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEec
Q 010388          427 SIDV--KG--HDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAH  502 (512)
Q Consensus       427 ~~~~--~~--~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (512)
                      +++.  .+  -.++++|||+|.|.|||+.||.+|+|.++..+|++||+|+.++ ..+++++   ......|.++++|+.+
T Consensus       407 ~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~-~~P~~d~---s~~v~~P~g~v~irYK  482 (486)
T KOG0684|consen  407 NGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDG-PFPEVDY---SRMVMQPEGDVRIRYK  482 (486)
T ss_pred             CcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCC-CCCCCCH---HHhhcCCCCCceEEEe
Confidence            5433  11  2345799999999999999999999999999999999999986 2222333   3447779999999999


Q ss_pred             cCC
Q 010388          503 PRL  505 (512)
Q Consensus       503 ~r~  505 (512)
                      +|+
T Consensus       483 ~R~  485 (486)
T KOG0684|consen  483 RRP  485 (486)
T ss_pred             ecC
Confidence            996


No 26 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.5e-70  Score=541.98  Aligned_cols=439  Identities=23%  Similarity=0.327  Sum_probs=345.9

Q ss_pred             CCCCCCCCCCCCccccccccc-----CCCCcHHHHHHHHhhCC--eEEEeecCccEEEecCHHHHHHHHHhCCccccCCC
Q 010388           31 RKLNLPPGPKPWPIIGNLHLI-----GSLPHRSVHALSEKYGP--IMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRP  103 (512)
Q Consensus        31 ~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~--v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~  103 (512)
                      ...+.||||+++|++|+++.+     ..+++.++.++++|||+  ++++++++.++|+++||+++++++.++ ..|..+.
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence            345689999999999998776     34688899999999997  789999999999999999999999865 3343322


Q ss_pred             CcCcccccccCCcceEeCCCChhHHHHHHHHHhhhc-chhHhhhhHHHHHHHHHHHHHHHHhhcCCCeehHHHHHHHHHH
Q 010388          104 KTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELF-SAKRLESFEYIRVQELKLLLSRLYELSGKPIMLKDHLSDLSLA  182 (512)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~d  182 (512)
                      ......  ..+ ...+...+|+.|+++|+.+ .+.| +.+.++.+.+.+.+.++++++.|..  ++.+|+.+.++.++++
T Consensus       118 ~~~~~~--~~g-~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~~  191 (490)
T PLN02302        118 PESTVE--LIG-RKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTFK  191 (490)
T ss_pred             chhHHH--Hhc-cccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHHH
Confidence            111111  122 2334556799999999998 5777 5788999999999999999999865  4569999999999999


Q ss_pred             HHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          183 VISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHN  262 (512)
Q Consensus       183 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (512)
                      ++++++||.+++...        ..+.............  ....+|..       ..++..+..+.+.+++.+.+++++
T Consensus       192 vi~~~~~G~~~~~~~--------~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~~  254 (490)
T PLN02302        192 IIMYIFLSSESELVM--------EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDERR  254 (490)
T ss_pred             HHHHHHcCCCChHHH--------HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998764322        2222222211111101  11111211       123344566778888888888887


Q ss_pred             HHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 010388          263 ARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVI  342 (512)
Q Consensus       263 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      +..+........|+++.++++.+++  +..++++++++++..+++||+|||+++++|++++|++||++|+|+++|+++++
T Consensus       255 ~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~  332 (490)
T PLN02302        255 NSRKQNISPRKKDMLDLLLDAEDEN--GRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIA  332 (490)
T ss_pred             HhhhccCCCCcCCHHHHHHhhhccC--CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            6543222234579999999875443  34588999999999999999999999999999999999999999999999988


Q ss_pred             cCC----CcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCC
Q 010388          343 GKE----RWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEF  418 (512)
Q Consensus       343 ~~~----~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F  418 (512)
                      +..    ..++.+++++||||+|||+|+||++|+++.. +|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       333 ~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F  411 (490)
T PLN02302        333 KKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV-FREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEF  411 (490)
T ss_pred             hcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc-hhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCcccc
Confidence            642    1378899999999999999999999999886 49999999999999999999999999999999999999999


Q ss_pred             CCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCce
Q 010388          419 YPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLE  498 (512)
Q Consensus       419 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (512)
                      +||||++..    ..+..++|||+|+|.|+|++||.+|+++++++|+++|++++.++.    .+..  ......|..++.
T Consensus       412 ~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~  481 (490)
T PLN02302        412 DPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG----CKVM--YLPHPRPKDNCL  481 (490)
T ss_pred             ChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC----Ccce--eCCCCCCCCCce
Confidence            999999643    245688999999999999999999999999999999999987541    1222  122367788999


Q ss_pred             EEeccCCC
Q 010388          499 VLAHPRLS  506 (512)
Q Consensus       499 ~~~~~r~~  506 (512)
                      +++++|.+
T Consensus       482 ~~~~~~~~  489 (490)
T PLN02302        482 ARITKVAS  489 (490)
T ss_pred             EEEEeccC
Confidence            99999986


No 27 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.5e-70  Score=532.08  Aligned_cols=436  Identities=21%  Similarity=0.320  Sum_probs=343.6

Q ss_pred             cCCCCCCCCCCCCccccccccc-----CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCC
Q 010388           30 RRKLNLPPGPKPWPIIGNLHLI-----GSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPK  104 (512)
Q Consensus        30 ~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~  104 (512)
                      +++.+.||||.++|++|+++.+     ..+++.++.+++++||+||++++++.++|+++||+++++++.+++..+..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            3556788999999999999877     24688899999999999999999999999999999999999987666654321


Q ss_pred             cCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhh-hHHHHHHHHHHHHHHHHhhcCCCeehHHHHHHHHHHH
Q 010388          105 TAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLES-FEYIRVQELKLLLSRLYELSGKPIMLKDHLSDLSLAV  183 (512)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~dv  183 (512)
                      ......  .+ ...++..+|+.|+++|+.+ ++.|+...+.. ..+.+.+.++++++.|..  ++++|+.+.+..+++++
T Consensus        83 ~~~~~l--~g-~~~~~~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v  156 (452)
T PLN03141         83 KSLTEL--MG-KSSILLINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEV  156 (452)
T ss_pred             hhHHHH--hC-cccccccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHH
Confidence            111111  22 2346667899999999997 67888777766 456777777777776643  67899999999999999


Q ss_pred             HHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          184 ISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNA  263 (512)
Q Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  263 (512)
                      +++++||.+.+...        .++...+........      .+|+  +++ .....+..++.+.+.+++..++++++.
T Consensus       157 i~~~~~G~~~~~~~--------~~~~~~~~~~~~~~~------~~~~--~~p-~~~~~~~~~~~~~l~~~~~~~i~~~~~  219 (452)
T PLN03141        157 LVKALISLEPGEEM--------EFLKKEFQEFIKGLM------SLPI--KLP-GTRLYRSLQAKKRMVKLVKKIIEEKRR  219 (452)
T ss_pred             HHHHHcCCCchHHH--------HHHHHHHHHHhhhHH------hCcc--CCC-chHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998663211        222222222221111      1121  111 111234456788899999999988876


Q ss_pred             HhcCCCC---CCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 010388          264 RRKGVEN---YVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDR  340 (512)
Q Consensus       264 ~~~~~~~---~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~  340 (512)
                      ..+....   ....|+++.++++.     +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+++
T Consensus       220 ~~~~~~~~~~~~~~d~l~~ll~~~-----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~  294 (452)
T PLN03141        220 AMKNKEEDETGIPKDVVDVLLRDG-----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMK  294 (452)
T ss_pred             HHhccCccccCChhhHHHHHHhcC-----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            5432111   12468999998753     235889999999999999999999999999999999999999999999998


Q ss_pred             Hhc----CCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCC
Q 010388          341 VIG----KERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPN  416 (512)
Q Consensus       341 ~~~----~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~  416 (512)
                      +++    .+..++.+++.+||||+|||+|+||++|+++.+ +|.+.+|++++||.||||+.|+++.+++||||++|+||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~-~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~  373 (452)
T PLN03141        295 LKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV-MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPY  373 (452)
T ss_pred             HHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc-ceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCcc
Confidence            763    234578899999999999999999999999865 699999999999999999999999999999999999999


Q ss_pred             CCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCC
Q 010388          417 EFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFP  496 (512)
Q Consensus       417 ~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  496 (512)
                      +|+||||++.+.    .+.+|+|||+|+|.|+|++||++|+++++|+|+++|++++.++.   ..     ...+..|+.+
T Consensus       374 ~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~---~~-----~~~~~~~~~~  441 (452)
T PLN03141        374 QFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDT---IV-----NFPTVRMKRK  441 (452)
T ss_pred             ccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCC---ee-----ecccccCCCC
Confidence            999999996532    35689999999999999999999999999999999999986541   11     1246778899


Q ss_pred             ceEEeccCCC
Q 010388          497 LEVLAHPRLS  506 (512)
Q Consensus       497 ~~~~~~~r~~  506 (512)
                      +.|.+++|+-
T Consensus       442 ~~~~~~~~~~  451 (452)
T PLN03141        442 LPIWVTRIDD  451 (452)
T ss_pred             ceEEEEeCCC
Confidence            9999999963


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.9e-69  Score=522.85  Aligned_cols=445  Identities=19%  Similarity=0.291  Sum_probs=340.0

Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCcccccccccC-----CCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHh
Q 010388           20 ALVLLSVRLRRRKLNLPPGPKPWPIIGNLHLIG-----SLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKT   94 (512)
Q Consensus        20 ~~~~~~~~~~~~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~   94 (512)
                      ++.++..+....+.+.||||.++|++|+++.+.     .++..++.+++++||+++++++++.++++++||+++++++.+
T Consensus        16 ~~~~~~~~~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~   95 (472)
T PLN02987         16 IFFLLLRRTRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQN   95 (472)
T ss_pred             HHHHHHHhhccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhC
Confidence            333333333334456788999999999998762     458888999999999999999999999999999999999998


Q ss_pred             CCccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHH-HHHHHHHHHHHHHHhhcCCCeehH
Q 010388           95 HDVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY-IRVQELKLLLSRLYELSGKPIMLK  173 (512)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~vdl~  173 (512)
                      +...|..++.......  .+. ..++..+|+.|+++|+.+ .+.++.+.++.+.. .+.+.++..++.|.    +++++.
T Consensus        96 ~~~~f~~~~~~~~~~~--lg~-~~l~~~~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~~v~~~  167 (472)
T PLN02987         96 EGKLFECSYPGSISNL--LGK-HSLLLMKGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSWS----SRVLLM  167 (472)
T ss_pred             CCceEEecCcHHHHHH--hCc-ccccccCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhhc----cceehH
Confidence            7666644322111111  222 234555799999999996 45555555555432 23333444444442    469999


Q ss_pred             HHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHH
Q 010388          174 DHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKF  253 (512)
Q Consensus       174 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  253 (512)
                      +.++.++++++++++||.+.+...        +.+...+.......    ....+|++     ....++..+..+.+.++
T Consensus       168 ~~~~~~t~~vi~~~~fg~~~~~~~--------~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~  230 (472)
T PLN02987        168 EEAKKITFELTVKQLMSFDPGEWT--------ESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEA  230 (472)
T ss_pred             HHHHHHHHHHHHHHHcCCCChHHH--------HHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHH
Confidence            999999999999999998764221        22222222221111    11223432     12345677788899999


Q ss_pred             HHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHH
Q 010388          254 LEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEK  333 (512)
Q Consensus       254 ~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  333 (512)
                      +.+.++++++..... .....|+++.+++..      .++++++++++++.+++||+|||+++++|++++|++||++|++
T Consensus       231 ~~~~i~~r~~~~~~~-~~~~~d~l~~ll~~~------~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~  303 (472)
T PLN02987        231 LTLVVMKRRKEEEEG-AEKKKDMLAALLASD------DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQ  303 (472)
T ss_pred             HHHHHHHHHhhhhcc-CcccccHHHHHHhcC------CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHH
Confidence            999999987654221 123579999999752      2588999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhc---CCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCC
Q 010388          334 AIEELDRVIG---KERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPS  410 (512)
Q Consensus       334 l~~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~  410 (512)
                      +++|++.+.+   .+..++.+++.+|||++|||+||||++|+++.. +|.+.+|++++||.||||+.|+++.+.+||||+
T Consensus       304 l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~-~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~  382 (472)
T PLN02987        304 LKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI-FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHE  382 (472)
T ss_pred             HHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc-cccCCCCeeECCEEECCCCEEEEehHHhhCCcc
Confidence            9999999874   234578899999999999999999999999865 599999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccCCCCCccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCcc
Q 010388          411 LWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLS  490 (512)
Q Consensus       411 ~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~  490 (512)
                      +|+||++||||||++.+.. ......++|||+|+|.|+|++||++|++++++.|+++|++++.++.   +  ..  ...+
T Consensus       383 ~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~--~~~~  454 (472)
T PLN02987        383 YFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQD---K--LV--FFPT  454 (472)
T ss_pred             cCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCC---c--ee--eccc
Confidence            9999999999999965332 1234679999999999999999999999999999999999987552   2  11  2347


Q ss_pred             ccCCCCceEEeccCC
Q 010388          491 TPRKFPLEVLAHPRL  505 (512)
Q Consensus       491 ~~~~~~~~~~~~~r~  505 (512)
                      ..|..++.+++++|+
T Consensus       455 ~~p~~~~~~~~~~r~  469 (472)
T PLN02987        455 TRTQKRYPINVKRRD  469 (472)
T ss_pred             ccCCCCceEEEEecc
Confidence            778889999999995


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.1e-69  Score=531.27  Aligned_cols=452  Identities=23%  Similarity=0.346  Sum_probs=352.3

Q ss_pred             CCCCCCCCCccccccccc-----CCCCcHHHHHHHHhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcc
Q 010388           34 NLPPGPKPWPIIGNLHLI-----GSLPHRSVHALSEKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAG  108 (512)
Q Consensus        34 ~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~  108 (512)
                      +.-.|-.+||.+|..+.+     .+.++..+.+|+++||+++++++++.++++++||+++++|+...+..|.+++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            344578899999998776     466889999999999999999999999999999999999998765566554322111


Q ss_pred             cccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHH-HHHHHHHHHHHHHHhh--cCCCeehHHHHHHHHHHHHH
Q 010388          109 KYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEY-IRVQELKLLLSRLYEL--SGKPIMLKDHLSDLSLAVIS  185 (512)
Q Consensus       109 ~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~l~~~--~~~~vdl~~~~~~~~~dvi~  185 (512)
                      .. ..+  ..++..+|+.|+++|+.+ ++.|+.+.+..+.+ .+.++++.+++.+.+.  .++++|+.++++.+++|+++
T Consensus        92 ~~-~~~--~~i~~~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~  167 (489)
T PLN02936         92 EF-LFG--SGFAIAEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG  167 (489)
T ss_pred             HH-Hhc--CccccCCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence            11 112  345567799999999997 79999888888654 7788899999999765  46789999999999999999


Q ss_pred             HHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccccccc--cC-ccchHHHHHHHHHHHHHHHHHHHHHHH
Q 010388          186 RMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGF--LD-LQGNIKRMKALAKKFDKFLEHVLDEHN  262 (512)
Q Consensus       186 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  262 (512)
                      .++||.+++....+      .++...+...+..... .....+|++.+  +. .....++..++.+.+.+++.+.+++++
T Consensus       168 ~~~fG~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~  240 (489)
T PLN02936        168 LSVFNYNFDSLTTD------SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCK  240 (489)
T ss_pred             HHHcCCCccccccC------cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998754311      1233333322221111 11112332211  00 011234566777888888888888776


Q ss_pred             HHhcCCC---------CCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHH
Q 010388          263 ARRKGVE---------NYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEK  333 (512)
Q Consensus       263 ~~~~~~~---------~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~  333 (512)
                      +..++..         .....|+++.|+.+.      .+++.+++.++++.+++||+|||+++++|++++|++||++|++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~------~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~k  314 (489)
T PLN02936        241 EIVEAEGEVIEGEEYVNDSDPSVLRFLLASR------EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRK  314 (489)
T ss_pred             HHHhhcccccccccccccCchHHHHHHHhcc------ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            5432110         123468999998653      2478999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCC
Q 010388          334 AIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWE  413 (512)
Q Consensus       334 l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~  413 (512)
                      +++|++++++. +.++.+++++||||+|||+||||++|+++...+|.+..|+.++||.||||+.|+++.+.+||||++|+
T Consensus       315 l~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~  393 (489)
T PLN02936        315 AQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWE  393 (489)
T ss_pred             HHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCC
Confidence            99999999875 45788999999999999999999999999888677788888899999999999999999999999999


Q ss_pred             CCCCCCCCcccCCCCC--ccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccc
Q 010388          414 KPNEFYPERFIGKSID--VKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLST  491 (512)
Q Consensus       414 dp~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~  491 (512)
                      ||++|+||||++++..  ....+..++|||.|+|.|+|++||++|+++++++|+++|+++++++.   +...  ..+++.
T Consensus       394 dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~---~~~~--~~~~~~  468 (489)
T PLN02936        394 RAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQ---DIVM--TTGATI  468 (489)
T ss_pred             CccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCC---ccce--ecceEE
Confidence            9999999999964321  12234589999999999999999999999999999999999998652   2222  234556


Q ss_pred             cCCCCceEEeccCCCCC
Q 010388          492 PRKFPLEVLAHPRLSPH  508 (512)
Q Consensus       492 ~~~~~~~~~~~~r~~~~  508 (512)
                      .|+.+++|++++|..+.
T Consensus       469 ~~~~~~~v~~~~R~~~~  485 (489)
T PLN02936        469 HTTNGLYMTVSRRRVPD  485 (489)
T ss_pred             eeCCCeEEEEEeeeCCC
Confidence            67889999999998774


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=8.3e-68  Score=516.77  Aligned_cols=439  Identities=20%  Similarity=0.238  Sum_probs=335.5

Q ss_pred             CcccccccccCCCCcHHHHHHHHhhC-CeEEEeecCccEEEecCHHHHHHHHHhCCccccCCCCcCcccccccCCcceEe
Q 010388           42 WPIIGNLHLIGSLPHRSVHALSEKYG-PIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLFAGRPKTAAGKYTTFNYSDITW  120 (512)
Q Consensus        42 ~p~~G~~~~~~~~~~~~~~~~~~kyG-~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (512)
                      .++.|++.....+...++..+.++++ .+++++.++.  ++++||+.+++++..+...|.+............+  .+++
T Consensus        49 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--~gi~  124 (502)
T PLN02426         49 AYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--RGIF  124 (502)
T ss_pred             CCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--Ccee
Confidence            46888876654556777777888887 5777766554  89999999999998765555543222111101112  3467


Q ss_pred             CCCChhHHHHHHHHHhhhcchhHhhhhH--HHHHHHHHHHHHHHHhh----cCCCeehHHHHHHHHHHHHHHHHhCcccc
Q 010388          121 SPYGPYWRQARKMCLMELFSAKRLESFE--YIRVQELKLLLSRLYEL----SGKPIMLKDHLSDLSLAVISRMVLGKNYT  194 (512)
Q Consensus       121 ~~~g~~~~~~R~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~~~----~~~~vdl~~~~~~~~~dvi~~~~fG~~~~  194 (512)
                      +.+|+.|+++||.+ ++.|+.++++.+.  +.+.+.++.+++.+.+.    .++++|+.++++.+++|+++.++||.+++
T Consensus       125 ~~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        125 NVDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             ecCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            78899999999997 7999999998864  67777778888887653    23579999999999999999999999987


Q ss_pred             ccccccccCChHHHHHHHHHHHHhhccCCCccccccccc---cCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010388          195 DKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIPWLGF---LDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENY  271 (512)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  271 (512)
                      ..+..   ....++...++.+...... ......|++++   +.+.+..++..+..+.+.+++.++|+++++..    ..
T Consensus       204 ~l~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~----~~  275 (502)
T PLN02426        204 CLELS---LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG----FS  275 (502)
T ss_pred             ccCCC---CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc----cC
Confidence            64421   1113444444443321110 00111232211   11123345667788889999999998887542    12


Q ss_pred             CcCcHHHHHHhhcCCCCcccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCC-Ccccc
Q 010388          272 VAKDMVDVLLQLADDPSLEVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKE-RWVEE  350 (512)
Q Consensus       272 ~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~  350 (512)
                      ...|+++.++++.        .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++||+++++.+ ..++.
T Consensus       276 ~~~dll~~ll~~~--------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~  347 (502)
T PLN02426        276 ASKDLLSRFMASI--------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASF  347 (502)
T ss_pred             CcchHHHHHHhcC--------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCH
Confidence            3579999999753        25788999999999999999999999999999999999999999999988753 36899


Q ss_pred             cccCCCchhHHHHHhhhcCCCCCccccccccccceee-cCeeeCCCCEEEeehhhcccCCCCC-CCCCCCCCCcccCCCC
Q 010388          351 KDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNV-AGYDIPKGTRVLVSVWAIGRHPSLW-EKPNEFYPERFIGKSI  428 (512)
Q Consensus       351 ~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l-~g~~ip~G~~v~~~~~~~~~d~~~~-~dp~~F~P~R~l~~~~  428 (512)
                      +++++||||+|||+||||++||++... |.+.+|.++ +|+.|||||.|.++++++||||++| +||++|+||||++++.
T Consensus       348 ~~l~~LpYl~avi~EtLRl~p~v~~~~-r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~  426 (502)
T PLN02426        348 EEMKEMHYLHAALYESMRLFPPVQFDS-KFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGV  426 (502)
T ss_pred             HHHhcChHHHHHHHHHHhCCCCCCCcc-eeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCC
Confidence            999999999999999999999999876 999888887 9999999999999999999999999 9999999999997432


Q ss_pred             CccCCccceecccCCCCCCCChhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccCC
Q 010388          429 DVKGHDFELLPFGAGRRMCPGYSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPRL  505 (512)
Q Consensus       429 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  505 (512)
                      .....+..++|||+|+|.|+|++||++|++++++.|+++|++++.++.  .+ ......+++..|++++++++++|.
T Consensus       427 ~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~--~~-~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        427 FVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRS--NR-APRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCC--CC-CCcccceeEEecCCCEEEEEEEcc
Confidence            112245678999999999999999999999999999999999986432  11 122234567888999999999985


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.7e-60  Score=457.65  Aligned_cols=407  Identities=18%  Similarity=0.237  Sum_probs=293.6

Q ss_pred             CCCCCCCCCCccccccccc-----CCCCcHHHHHHHHhhCC-eEEEeecCccE-------EEecCHHHHHHHHHh----C
Q 010388           33 LNLPPGPKPWPIIGNLHLI-----GSLPHRSVHALSEKYGP-IMQLKFGSFPV-------VVGSSVEMAKVVLKT----H   95 (512)
Q Consensus        33 ~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~kyG~-v~~~~~~~~~~-------v~v~~p~~~~~i~~~----~   95 (512)
                      .+.|||+.++|++|++..+     ..++..++.+.++|||+ ||+++++|.++       |++++|++++.++.+    +
T Consensus        16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~   95 (480)
T PLN02648         16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK   95 (480)
T ss_pred             CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence            4679999999999999764     45568999999999999 99999988655       999999999999975    3


Q ss_pred             CccccCCCCcCcccccccCCcceEeCCCChhHHHHHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhh--cCCCeehH
Q 010388           96 DVLFAGRPKTAAGKYTTFNYSDITWSPYGPYWRQARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYEL--SGKPIMLK  173 (512)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~--~~~~vdl~  173 (512)
                      ...+..... ......+.+....++..+|+.|+++|+.+ .+.|+ ..++.+.+.+.+.++++++.|...  .++++|+.
T Consensus        96 ~~~~~~~~~-~~~~l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~-~~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~  172 (480)
T PLN02648         96 RDVFTGTYM-PSTAFTGGYRVLSYLDPSEPKHAKLKSFL-FELLK-SRHRRFIPEFRAAFAELFDTWEAELAKKGKAEFN  172 (480)
T ss_pred             cccceeeec-cCccccCCceeeeecCCCCchHHHHHHHH-HHHHH-HhhhhhhhHHHHHHHHHHHHHHHHHhhCCCcccc
Confidence            333332211 11222221111256677899999999998 68898 477889999999999999999653  45679999


Q ss_pred             HHHHHHHHHHHHHHHhCccccccccccccCChHHHHHHHHHHHHhhccCCCccccc-cccccCc---cchHHHHHHHHHH
Q 010388          174 DHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFKAMLDELFLLNGVLDIGDSIP-WLGFLDL---QGNIKRMKALAKK  249 (512)
Q Consensus       174 ~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~---~~~~~~~~~~~~~  249 (512)
                      +.++.+++|++++++||.+.+...      ..+.+.............-.....++ ++.....   +.......+..+.
T Consensus       173 ~~~~~lt~~vi~~~lfG~~~~~~~------l~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~  246 (480)
T PLN02648        173 DPLDQMAFNFLCKALTGKDPSETA------LGSDGPALIQKWLALQLAPLASTGLPHVLEELLLHTFPLPFFLVKSDYDK  246 (480)
T ss_pred             chHHHHHHHHHHHHHcCCCcchhh------hccchhHHHHHHHHHHhhHHHHcCchHHHHHHhhcccCCchhhhhccHHH
Confidence            999999999999999998775411      00112222222111000000000001 0000000   0000000011111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCcccccchhhHHHHHHH-HHhhcccchHHHHHHHHHHHhhCh
Q 010388          250 FDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSLEVKIERHGVKAFTQD-LIAGGTESSAVTVEWAISELIKKP  328 (512)
Q Consensus       250 ~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~~~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~p  328 (512)
                      +.+++++                   .++.++....+    .+++++|++++++. +.+++++|++++++|++|+|++||
T Consensus       247 ~~~~~~~-------------------~~~~ll~~~~~----~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p  303 (480)
T PLN02648        247 LYDFFRA-------------------SATEALDLAEK----FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAG  303 (480)
T ss_pred             HHHHHHH-------------------HHHHHHHHHHh----cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCC
Confidence            1111111                   12233332222    24889999999875 446677888899999999999999


Q ss_pred             H-HHHHHHHHHHHHhcC-CCcccccccCCCchhHHHHHhhhcCCCCCccccccccccceeec----CeeeCCCCEEEeeh
Q 010388          329 E-IFEKAIEELDRVIGK-ERWVEEKDIVNLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVA----GYDIPKGTRVLVSV  402 (512)
Q Consensus       329 ~-~~~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~----g~~ip~G~~v~~~~  402 (512)
                      + +|++|++|++.+++. ++.++.+++++||||++||+||||++|+++... |.+.+|++++    ||.||||+.|+++.
T Consensus       304 ~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~-r~a~~d~~l~~~~~g~~IpkG~~V~~~~  382 (480)
T PLN02648        304 EELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQY-GRAREDFVIESHDAAFEIKKGEMLFGYQ  382 (480)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCccccc-ceecCCEEEecCCceEEECCCCEEEECh
Confidence            5 999999999999863 456899999999999999999999999999886 8899999995    79999999999999


Q ss_pred             hhcccCCCCCCCCCCCCCCcccCCCCCccCCccceecc---------cCCCCCCCChhhHHHHHHHHHHHhhhcce-eec
Q 010388          403 WAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPF---------GAGRRMCPGYSLGLKVIQASLANLLHGFA-WKL  472 (512)
Q Consensus       403 ~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A~~~~~~~l~~ll~~~~-~~~  472 (512)
                      +.+||||++|+||++|||+||++++.+.   ...+++|         |+|+|.|+|++||++|+++++++|+++|+ +++
T Consensus       383 ~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l  459 (480)
T PLN02648        383 PLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEI  459 (480)
T ss_pred             HHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEee
Confidence            9999999999999999999998643211   1233444         67789999999999999999999999998 998


Q ss_pred             CCC
Q 010388          473 PGN  475 (512)
Q Consensus       473 ~~~  475 (512)
                      .++
T Consensus       460 ~~~  462 (480)
T PLN02648        460 EVD  462 (480)
T ss_pred             cCC
Confidence            765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=1.7e-55  Score=418.59  Aligned_cols=382  Identities=27%  Similarity=0.420  Sum_probs=304.7

Q ss_pred             CcHHHHHHHHhhCCeEEEeecCcc--EEEecCHHHHHHHHHhCCccccCCCCcCcc---cccccCCcceEeCCCChhHHH
Q 010388           55 PHRSVHALSEKYGPIMQLKFGSFP--VVVGSSVEMAKVVLKTHDVLFAGRPKTAAG---KYTTFNYSDITWSPYGPYWRQ  129 (512)
Q Consensus        55 ~~~~~~~~~~kyG~v~~~~~~~~~--~v~v~~p~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~  129 (512)
                      +......+.+.||.+++.+..+..  ++++++++++++++.++. .++........   .....+ ...++..+|+.|.+
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ll~~dg~~H~r  101 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLG-DGSLLTLDGPEHTR  101 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhcc-ccceeecCCHHHHH
Confidence            445566778889988887765554  799999999999998764 22222211111   112222 23377788999999


Q ss_pred             HHHHHHhhhcchhHhhhhHHHHHHHHHHHHHHHHhhcCCCeehHHHHHHHHHHHHHHHHhCccccccccccccCChHHHH
Q 010388          130 ARKMCLMELFSAKRLESFEYIRVQELKLLLSRLYELSGKPIMLKDHLSDLSLAVISRMVLGKNYTDKQQENEIVTPQEFK  209 (512)
Q Consensus       130 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~vdl~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~  209 (512)
                      +||.+ ++.|+++.++.+.+.+.+.++++++.+ ... +.+++.+.+..+++++|+ .+||.+.+...         .+.
T Consensus       102 ~Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~---------~~~  168 (411)
T COG2124         102 LRKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQG-GADLVLDFAAELTLRVIA-ELLGVPLEDRP---------QLL  168 (411)
T ss_pred             HHHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-ccC-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH---------HHH
Confidence            99997 799999999999999999999999999 433 778899999999999999 99999885432         222


Q ss_pred             HHHHHHHHhhccCCCccccccccccCccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcHHHHHHhhcCCCCc
Q 010388          210 AMLDELFLLNGVLDIGDSIPWLGFLDLQGNIKRMKALAKKFDKFLEHVLDEHNARRKGVENYVAKDMVDVLLQLADDPSL  289 (512)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~  289 (512)
                      .........   .     .|...   ......+..++.+.+.+++.++|++++.       ...+|+++.|+.+.++++ 
T Consensus       169 ~~~~~~~~~---~-----~~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~-------~~~~dlls~l~~a~~~~~-  229 (411)
T COG2124         169 RWSDALLLR---L-----DPDLG---PEEPWRRARAARRELDAYLRALIAERRA-------APRDDLLSLLLSAEDDGG-  229 (411)
T ss_pred             HHHHHHHhc---c-----CcccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc-------CCcccHHHHHHHHhhCCC-
Confidence            222222211   0     01111   1223456788889999999999999883       346899999999887642 


Q ss_pred             ccccchhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHhcCCCcccccccCCCchhHHHHHhhhcC
Q 010388          290 EVKIERHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVIGKERWVEEKDIVNLPFIDAIVKETMRL  369 (512)
Q Consensus       290 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~EtlRl  369 (512)
                       ..+|++||+++++.+++||+|||+++++|+++.|++||++++++++|.+.                ||++++|+|+||+
T Consensus       230 -~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~  292 (411)
T COG2124         230 -GRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRL  292 (411)
T ss_pred             -CcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHh
Confidence             26999999999999999999999999999999999999999999999885                7999999999999


Q ss_pred             CCCCccccccccccceeecCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCccCCccceecccCCCCCCCC
Q 010388          370 HPVAPFLVPRAAREDCNVAGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPG  449 (512)
Q Consensus       370 ~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G  449 (512)
                      +||++. .+|.+++|++++|+.||||+.|+++++++||||++|+||++|||+||.          ..++|||+|+|.|+|
T Consensus       293 ~ppv~~-~~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG  361 (411)
T COG2124         293 YPPVPL-ARRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLG  361 (411)
T ss_pred             CCchhc-cceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccC
Confidence            999999 569999999999999999999999999999999999999999999995          578999999999999


Q ss_pred             hhhHHHHHHHHHHHhhhcceeecCCCCCCcCCCcccccCccccCCCCceEEeccC
Q 010388          450 YSLGLKVIQASLANLLHGFAWKLPGNMSNEELNMEEIFGLSTPRKFPLEVLAHPR  504 (512)
Q Consensus       450 ~~~A~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  504 (512)
                      ..||++|++++++.++++|++....+ . .  ...  .+.+..+.....+.+++|
T Consensus       362 ~~lA~~E~~~~l~~ll~r~~~~~~~~-~-~--~~~--~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         362 AALARLELKVALAELLRRFPLLLLAE-P-P--PLV--RRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             HHHHHHHHHHHHHHHHHhCchhhcCC-C-C--Ccc--ccccccCCCcceeeeecC
Confidence            99999999999999999999988754 1 1  111  233344555666666654


No 33 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=76.48  E-value=0.97  Score=38.03  Aligned_cols=44  Identities=30%  Similarity=0.307  Sum_probs=33.8

Q ss_pred             CCchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEe
Q 010388          355 NLPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLV  400 (512)
Q Consensus       355 ~lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~  400 (512)
                      .-..+.|||.|+.-+......-+ | ..+|+.++|..|||||.|.-
T Consensus        51 ~~n~I~A~V~~~qtv~~Gs~vrl-R-Lle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   51 EKNTIRAVVDGTQTVVDGSRVRL-R-LLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCCeEEEEEecceEEeCCCEEEE-E-EcCceEECCEEeCCCCEEEE
Confidence            34568899999998876554332 2 47889999999999998775


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=65.43  E-value=23  Score=21.87  Aligned_cols=44  Identities=23%  Similarity=0.285  Sum_probs=35.1

Q ss_pred             hhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHH
Q 010388          296 HGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELD  339 (512)
Q Consensus       296 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~  339 (512)
                      -++..++..++-.|.|..+-.++--|...--||+....+..|+.
T Consensus         5 ~d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    5 LDVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            34666777788888888888888888888889999888888763


No 35 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=58.82  E-value=7.1  Score=25.35  Aligned_cols=7  Identities=43%  Similarity=0.852  Sum_probs=5.8

Q ss_pred             CCCcccC
Q 010388          419 YPERFIG  425 (512)
Q Consensus       419 ~P~R~l~  425 (512)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            8899984


No 36 
>PRK06789 flagellar motor switch protein; Validated
Probab=56.74  E-value=14  Score=25.32  Aligned_cols=40  Identities=5%  Similarity=0.191  Sum_probs=32.8

Q ss_pred             HHHhhhcCCCCCccccccccccceee--cCeeeCCCCEEEee
Q 010388          362 IVKETMRLHPVAPFLVPRAAREDCNV--AGYDIPKGTRVLVS  401 (512)
Q Consensus       362 ~i~EtlRl~p~~~~~~~R~~~~~~~l--~g~~ip~G~~v~~~  401 (512)
                      -++|-+.|.+.....+.|.+.+++.+  +|..|.+|..|.++
T Consensus        21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~   62 (74)
T PRK06789         21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN   62 (74)
T ss_pred             EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence            36899999998887777888776554  99999999988764


No 37 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=51.80  E-value=23  Score=27.22  Aligned_cols=18  Identities=22%  Similarity=0.360  Sum_probs=6.1

Q ss_pred             HHHHHHHHHHHHhcCCCC
Q 010388           17 ATLALVLLSVRLRRRKLN   34 (512)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~   34 (512)
                      +++++++++.+|++++.+
T Consensus        79 g~Illi~y~irR~~Kk~~   96 (122)
T PF01102_consen   79 GIILLISYCIRRLRKKSS   96 (122)
T ss_dssp             HHHHHHHHHHHHHS----
T ss_pred             HHHHHHHHHHHHHhccCC
Confidence            333344444445544433


No 38 
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=50.73  E-value=4.9  Score=38.01  Aligned_cols=44  Identities=27%  Similarity=0.222  Sum_probs=33.4

Q ss_pred             CchhHHHHHhhhcCCCCCccccccccccceeecCeeeCCCCEEEee
Q 010388          356 LPFIDAIVKETMRLHPVAPFLVPRAAREDCNVAGYDIPKGTRVLVS  401 (512)
Q Consensus       356 lp~l~a~i~EtlRl~p~~~~~~~R~~~~~~~l~g~~ip~G~~v~~~  401 (512)
                      -..+.|||.|+.-+.-....-+ | ..+|+.++|..|||||.|+-.
T Consensus       255 ~n~I~A~V~~~qtv~~G~~vrl-R-Lle~~~v~~~~ipkgt~l~g~  298 (410)
T TIGR03779       255 RNTIRACVHETQTVVDGSAVKL-R-LLEPIQAGDLVIPKGTVLYGT  298 (410)
T ss_pred             CCceEEEEcCceEEecCCEEEE-E-EcCceeeCCEEecCCCEEEEE
Confidence            4568899999998875443322 2 378999999999999977654


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=50.31  E-value=16  Score=23.47  Aligned_cols=24  Identities=33%  Similarity=0.578  Sum_probs=18.9

Q ss_pred             HHHHHhhChHHHHHHHHHHHHHhc
Q 010388          320 AISELIKKPEIFEKAIEELDRVIG  343 (512)
Q Consensus       320 ~l~~L~~~p~~~~~l~~Ei~~~~~  343 (512)
                      ++.+|.+||++.+++.+.=.+++|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            567899999999999986555544


No 40 
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=49.90  E-value=58  Score=31.57  Aligned_cols=46  Identities=13%  Similarity=0.223  Sum_probs=24.5

Q ss_pred             CCcHHHHHHH-HhhCCeEEEeecCccEEEecCHHHHHHHHHhCCccc
Q 010388           54 LPHRSVHALS-EKYGPIMQLKFGSFPVVVGSSVEMAKVVLKTHDVLF   99 (512)
Q Consensus        54 ~~~~~~~~~~-~kyG~v~~~~~~~~~~v~v~~p~~~~~i~~~~~~~~   99 (512)
                      ++.+.+.-.. =+||.|++-.+-++.+-|=.-|..-++-+.+....|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy  256 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIY  256 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHH
Confidence            3444443333 368899888777766544344444444444443333


No 41 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=44.17  E-value=21  Score=27.62  Aligned_cols=23  Identities=22%  Similarity=0.354  Sum_probs=16.6

Q ss_pred             CCCCChhhHHHHHHHHHHHhhhc
Q 010388          445 RMCPGYSLGLKVIQASLANLLHG  467 (512)
Q Consensus       445 r~C~G~~~A~~~~~~~l~~ll~~  467 (512)
                      ..|.|++||..++-.++.+++..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            36999999999999999999864


No 42 
>PHA03049 IMV membrane protein; Provisional
Probab=41.68  E-value=67  Score=21.25  Aligned_cols=28  Identities=11%  Similarity=0.056  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 010388           11 YLTAWLATLALVLLSVRLRRRKLNLPPG   38 (512)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~ppg   38 (512)
                      +++|++++.++++.+|.+.+.....||-
T Consensus         8 ~iICVaIi~lIvYgiYnkk~~~q~~~p~   35 (68)
T PHA03049          8 VIICVVIIGLIVYGIYNKKTTTSQNPPS   35 (68)
T ss_pred             HHHHHHHHHHHHHHHHhcccccCCCCCC
Confidence            3444444444444444443333334443


No 43 
>PF11138 DUF2911:  Protein of unknown function (DUF2911);  InterPro: IPR021314  This bacterial family of proteins has no known function. 
Probab=40.88  E-value=36  Score=27.10  Aligned_cols=39  Identities=18%  Similarity=0.445  Sum_probs=25.7

Q ss_pred             ccceeecCeeeCCCCEEEeehh-------hcccCCCCCCCCCCCCCC
Q 010388          382 REDCNVAGYDIPKGTRVLVSVW-------AIGRHPSLWEKPNEFYPE  421 (512)
Q Consensus       382 ~~~~~l~g~~ip~G~~v~~~~~-------~~~~d~~~~~dp~~F~P~  421 (512)
                      .+|++++|..||+|++-+..+.       .+|++...|.. ..+||+
T Consensus        53 ~~dv~igGk~l~AG~Ysl~tiP~~~~WtvI~n~~~~~wG~-~~Y~~~   98 (145)
T PF11138_consen   53 SKDVTIGGKKLKAGTYSLFTIPGEDEWTVIFNKDTDQWGA-YNYDPS   98 (145)
T ss_pred             CCCeEECCEEcCCeeEEEEEecCCCeEEEEEECCCCccCc-cccCch
Confidence            6789999999999997766554       33445555533 344444


No 44 
>PHA02902 putative IMV membrane protein; Provisional
Probab=39.10  E-value=1.1e+02  Score=20.05  Aligned_cols=21  Identities=10%  Similarity=-0.018  Sum_probs=10.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHh
Q 010388            9 VSYLTAWLATLALVLLSVRLR   29 (512)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~   29 (512)
                      +.++++.++.+.+++..|++.
T Consensus         7 vi~~v~v~Ivclliya~YrR~   27 (70)
T PHA02902          7 VILAVIVIIFCLLIYAAYKRY   27 (70)
T ss_pred             HHHHHHHHHHHHHHHHHHHHh
Confidence            344555555555555555554


No 45 
>PHA02681 ORF089 virion membrane protein; Provisional
Probab=38.33  E-value=1.4e+02  Score=20.84  Aligned_cols=17  Identities=12%  Similarity=0.055  Sum_probs=7.1

Q ss_pred             HHHHHHHHHHHHHHHHh
Q 010388           13 TAWLATLALVLLSVRLR   29 (512)
Q Consensus        13 ~~~~~~~~~~~~~~~~~   29 (512)
                      +++++.|.+++..|++.
T Consensus        11 V~V~IVclliya~YRR~   27 (92)
T PHA02681         11 IVISIVCYIVIMMYRRS   27 (92)
T ss_pred             HHHHHHHHHHHHHHHhc
Confidence            33333344444444444


No 46 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=34.23  E-value=18  Score=22.73  Aligned_cols=11  Identities=45%  Similarity=0.936  Sum_probs=9.2

Q ss_pred             ecccCCCCCCC
Q 010388          438 LPFGAGRRMCP  448 (512)
Q Consensus       438 ~~Fg~G~r~C~  448 (512)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            46999999994


No 47 
>PF03742 PetN:  PetN ;  InterPro: IPR005497 PetN is a small hydrophobic protein, crucial for cytochrome b6-f complex assembly and/or stability. It is found in bacteria and plants. Cytochrome b6-f complex is composed of 4 large subunits: cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, as well as 4 small subunits: petG, petL, petM and petN. The complex functions as a dimer. The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI) [].; GO: 0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity, 0017004 cytochrome complex assembly, 0009512 cytochrome b6f complex; PDB: 2ZT9_H 2D2C_H 2E76_H 1VF5_U 2E75_H 2E74_H.
Probab=32.68  E-value=57  Score=17.50  Aligned_cols=22  Identities=27%  Similarity=0.673  Sum_probs=13.6

Q ss_pred             CCcccchHHHHHHHHHHHHHHH
Q 010388            1 MELIHPSWVSYLTAWLATLALV   22 (512)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~   22 (512)
                      |.+.++.|.++.+++.+.+.++
T Consensus         1 mdiv~lgWaal~~~ftfSlalV   22 (29)
T PF03742_consen    1 MDIVSLGWAALMVVFTFSLALV   22 (29)
T ss_dssp             -HHHCHHHHHHHHHHHHHHHHH
T ss_pred             CcchhhhHHHHHHHHhccceeE
Confidence            5666777877776666555443


No 48 
>PRK05933 type III secretion system protein; Validated
Probab=32.19  E-value=50  Score=30.03  Aligned_cols=44  Identities=14%  Similarity=0.141  Sum_probs=34.3

Q ss_pred             hhHHHHHhhhcCCCCCcccccccc-ccc--eeecCeeeCCCCEEEee
Q 010388          358 FIDAIVKETMRLHPVAPFLVPRAA-RED--CNVAGYDIPKGTRVLVS  401 (512)
Q Consensus       358 ~l~a~i~EtlRl~p~~~~~~~R~~-~~~--~~l~g~~ip~G~~v~~~  401 (512)
                      -...-|+|.|+|.+.....+.|.+ .++  +.++|..|.+|..|+++
T Consensus       316 RT~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd  362 (372)
T PRK05933        316 RYSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG  362 (372)
T ss_pred             cccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence            355668999999998877776664 344  55699999999999875


No 49 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=32.19  E-value=68  Score=29.25  Aligned_cols=71  Identities=21%  Similarity=0.263  Sum_probs=42.3

Q ss_pred             hhHHHHHhhhcCCCCCcc---ccccccccceee----cCeeeCCCCEEEeehhhcccCCCCCCCCCCCCCCcccCCCCCc
Q 010388          358 FIDAIVKETMRLHPVAPF---LVPRAAREDCNV----AGYDIPKGTRVLVSVWAIGRHPSLWEKPNEFYPERFIGKSIDV  430 (512)
Q Consensus       358 ~l~a~i~EtlRl~p~~~~---~~~R~~~~~~~l----~g~~ip~G~~v~~~~~~~~~d~~~~~dp~~F~P~R~l~~~~~~  430 (512)
                      +=+.+|+.|..+.||+..   .+.-..+.|.++    =.-.|..||.|.++ .               -|.+|       
T Consensus       274 ~ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~-G---------------spYs~-------  330 (361)
T COG1759         274 MGERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG-G---------------SPYSN-------  330 (361)
T ss_pred             HHHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC-C---------------Ccchh-------
Confidence            346678889999997643   232333444333    13467788877664 1               13333       


Q ss_pred             cCCccceecccCCCCCCCChhhHHHHHHHHH
Q 010388          431 KGHDFELLPFGAGRRMCPGYSLGLKVIQASL  461 (512)
Q Consensus       431 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l  461 (512)
                             +-||.+  +-+|+.+|. |+|.++
T Consensus       331 -------l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         331 -------LYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             -------hhcCCC--cchhhHHHH-HHHHHH
Confidence                   444433  567899998 888765


No 50 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=31.21  E-value=1.3e+02  Score=20.11  Aligned_cols=16  Identities=0%  Similarity=-0.236  Sum_probs=6.4

Q ss_pred             HHHHHHHHHHHHHHHH
Q 010388           11 YLTAWLATLALVLLSV   26 (512)
Q Consensus        11 ~~~~~~~~~~~~~~~~   26 (512)
                      +++|++++.++++.+|
T Consensus         8 i~ICVaii~lIlY~iY   23 (68)
T PF05961_consen    8 IIICVAIIGLILYGIY   23 (68)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3444444333333333


No 51 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=30.05  E-value=1e+02  Score=21.90  Aligned_cols=17  Identities=35%  Similarity=0.552  Sum_probs=15.0

Q ss_pred             hHHHHHHHHHHHHHhcC
Q 010388          328 PEIFEKAIEELDRVIGK  344 (512)
Q Consensus       328 p~~~~~l~~Ei~~~~~~  344 (512)
                      |+..+.+|+||..++..
T Consensus        36 pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851          36 PDYLEQLRKEILEVISK   52 (88)
T ss_pred             cchHHHHHHHHHHHHHH
Confidence            89999999999998754


No 52 
>PF04798 Baculo_19:  Baculovirus 19 kDa protein conserved region;  InterPro: IPR006883 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf96; it is a family of uncharacterised viral proteins.
Probab=28.48  E-value=25  Score=27.71  Aligned_cols=24  Identities=17%  Similarity=0.376  Sum_probs=18.3

Q ss_pred             CccceecccCCCCCCCChhhHHHHH
Q 010388          433 HDFELLPFGAGRRMCPGYSLGLKVI  457 (512)
Q Consensus       433 ~~~~~~~Fg~G~r~C~G~~~A~~~~  457 (512)
                      .-.+++- |.+.|.||++.+|..-+
T Consensus        56 ~lYyYle-gss~~~CP~nE~avVrf   79 (146)
T PF04798_consen   56 TLYYYLE-GSSSVFCPPNEFAVVRF   79 (146)
T ss_pred             eEEEEEe-ccccccCCCCceEEEEE
Confidence            3456788 99999999888875443


No 53 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=27.49  E-value=37  Score=28.90  Aligned_cols=19  Identities=21%  Similarity=0.576  Sum_probs=17.1

Q ss_pred             hcccCCCCCCCCCCCCCCc
Q 010388          404 AIGRHPSLWEKPNEFYPER  422 (512)
Q Consensus       404 ~~~~d~~~~~dp~~F~P~R  422 (512)
                      .-+.|+.+|.|.+.|+|-|
T Consensus       193 ~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  193 PDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCcccccCccccCCCC
Confidence            4578999999999999988


No 54 
>PF12444 Sox_N:  Sox developmental protein N terminal ;  InterPro: IPR022151  This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes. 
Probab=27.04  E-value=41  Score=23.78  Aligned_cols=20  Identities=25%  Similarity=0.682  Sum_probs=17.4

Q ss_pred             HHHHHHHHHhhhcceeecCC
Q 010388          455 KVIQASLANLLHGFAWKLPG  474 (512)
Q Consensus       455 ~~~~~~l~~ll~~~~~~~~~  474 (512)
                      .-|+-++..+|.-|||+|++
T Consensus        60 ~~IrdAVsqVLkGYDWtLVP   79 (84)
T PF12444_consen   60 VCIRDAVSQVLKGYDWTLVP   79 (84)
T ss_pred             HHHHHHHHHHhccCCceeee
Confidence            34788999999999999984


No 55 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=27.00  E-value=1.1e+02  Score=17.82  Aligned_cols=17  Identities=24%  Similarity=0.407  Sum_probs=11.6

Q ss_pred             HHHHHh-hChHHHHHHHH
Q 010388          320 AISELI-KKPEIFEKAIE  336 (512)
Q Consensus       320 ~l~~L~-~~p~~~~~l~~  336 (512)
                      ++..++ +||++++.++.
T Consensus        18 lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   18 LLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHhChhHHHHHHh
Confidence            344444 89999988775


No 56 
>TIGR02588 conserved hypothetical protein TIGR02588. The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.
Probab=25.90  E-value=1.4e+02  Score=22.93  Aligned_cols=17  Identities=24%  Similarity=0.458  Sum_probs=8.7

Q ss_pred             chHHHHHHHHHHHHHHH
Q 010388            6 PSWVSYLTAWLATLALV   22 (512)
Q Consensus         6 ~~~~~~~~~~~~~~~~~   22 (512)
                      ..|+++.++++++++++
T Consensus         3 ~EWvt~~Is~~ill~vi   19 (122)
T TIGR02588         3 AEWVTFGISTLILAAMF   19 (122)
T ss_pred             HHhhhHHHHHHHHHHHH
Confidence            45666655554444433


No 57 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=25.39  E-value=21  Score=28.96  Aligned_cols=37  Identities=27%  Similarity=0.507  Sum_probs=27.1

Q ss_pred             CCCCCCcccCCCCCccCCccceecccCCCCCCCChhh
Q 010388          416 NEFYPERFIGKSIDVKGHDFELLPFGAGRRMCPGYSL  452 (512)
Q Consensus       416 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  452 (512)
                      .+|||++|=+--.+...++.+.+-|..|.-.|-|.+-
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc
Confidence            4699999954222333456789999999999999653


No 58 
>PF05568 ASFV_J13L:  African swine fever virus J13L protein;  InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=24.95  E-value=81  Score=24.59  Aligned_cols=11  Identities=18%  Similarity=0.075  Sum_probs=4.2

Q ss_pred             cchHHHHHHHH
Q 010388            5 HPSWVSYLTAW   15 (512)
Q Consensus         5 ~~~~~~~~~~~   15 (512)
                      +.....+++.+
T Consensus        28 sthm~tILiaI   38 (189)
T PF05568_consen   28 STHMYTILIAI   38 (189)
T ss_pred             HHHHHHHHHHH
Confidence            33333333333


No 59 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=24.31  E-value=1.8e+02  Score=21.79  Aligned_cols=10  Identities=50%  Similarity=0.584  Sum_probs=6.4

Q ss_pred             Cccccccccc
Q 010388           42 WPIIGNLHLI   51 (512)
Q Consensus        42 ~p~~G~~~~~   51 (512)
                      -|+.||+...
T Consensus        46 ~p~YgNL~~~   55 (107)
T PF15330_consen   46 DPCYGNLELQ   55 (107)
T ss_pred             Cccccccccc
Confidence            5777876443


No 60 
>PRK04989 psbM photosystem II reaction center protein M; Provisional
Probab=24.21  E-value=1.5e+02  Score=16.85  Aligned_cols=26  Identities=19%  Similarity=0.240  Sum_probs=13.1

Q ss_pred             CCcccchHHHHHHHHHHHHHHHHHHH
Q 010388            1 MELIHPSWVSYLTAWLATLALVLLSV   26 (512)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~   26 (512)
                      ||--.+.+++.+++.++=.++++.+|
T Consensus         1 MevN~lgfiAt~Lfi~iPt~FLlilY   26 (35)
T PRK04989          1 MEVNDLGFVASLLFVLVPTVFLIILY   26 (35)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHHh
Confidence            55555556655555544444444444


No 61 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=23.80  E-value=1.9e+02  Score=18.02  Aligned_cols=35  Identities=26%  Similarity=0.260  Sum_probs=24.2

Q ss_pred             HHHHHHhhCCeEEEeecCc----cEEEecCHHHHHHHHH
Q 010388           59 VHALSEKYGPIMQLKFGSF----PVVVGSSVEMAKVVLK   93 (512)
Q Consensus        59 ~~~~~~kyG~v~~~~~~~~----~~v~v~~p~~~~~i~~   93 (512)
                      +.++.++||+|-++.+...    -+|-..+.+.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            3567889999988876442    3555668888877775


No 62 
>PHA03162 hypothetical protein; Provisional
Probab=23.00  E-value=84  Score=24.21  Aligned_cols=24  Identities=25%  Similarity=0.523  Sum_probs=20.2

Q ss_pred             cCCCCCCCChhhHHHHHHHHHHHh
Q 010388          441 GAGRRMCPGYSLGLKVIQASLANL  464 (512)
Q Consensus       441 g~G~r~C~G~~~A~~~~~~~l~~l  464 (512)
                      ++|++.|||+...+-|+..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999998887777765


No 63 
>PF14824 Sirohm_synth_M:  Sirohaem biosynthesis protein central; PDB: 1KYQ_B.
Probab=22.54  E-value=1.1e+02  Score=16.84  Aligned_cols=15  Identities=20%  Similarity=0.457  Sum_probs=11.5

Q ss_pred             ChHHHHHHHHHHHHH
Q 010388          327 KPEIFEKAIEELDRV  341 (512)
Q Consensus       327 ~p~~~~~l~~Ei~~~  341 (512)
                      .|.+-.++|+||+..
T Consensus        15 sP~la~~iR~~ie~~   29 (30)
T PF14824_consen   15 SPRLARLIRKEIERL   29 (30)
T ss_dssp             -HHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHh
Confidence            478888899998864


No 64 
>PF05151 PsbM:  Photosystem II reaction centre M protein (PsbM);  InterPro: IPR007826 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].  This family represents the low molecular weight transmembrane protein PsbM found in PSII. PsbM is one of the most hydrophobic proteins in the thylakoid membrane. The function of this protein is unknown.; GO: 0015979 photosynthesis, 0019684 photosynthesis, light reaction, 0009523 photosystem II, 0016021 integral to membrane; PDB: 3A0H_m 3ARC_m 3A0B_M 3PRR_M 3PRQ_M 1S5L_M 4FBY_e 3BZ2_M 3BZ1_M 2AXT_M ....
Probab=22.32  E-value=1.5e+02  Score=16.32  Aligned_cols=26  Identities=15%  Similarity=0.174  Sum_probs=12.8

Q ss_pred             CCcccchHHHHHHHHHHHHHHHHHHH
Q 010388            1 MELIHPSWVSYLTAWLATLALVLLSV   26 (512)
Q Consensus         1 m~~~~~~~~~~~~~~~~~~~~~~~~~   26 (512)
                      ||--...+++.+++.++-.++++.+|
T Consensus         1 Mevn~l~fiAtaLfi~iPt~FLiily   26 (31)
T PF05151_consen    1 MEVNILAFIATALFILIPTAFLIILY   26 (31)
T ss_dssp             B---TTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccchhhHHHHHHHHHHHHHHHhheE
Confidence            55555666666666655444444444


No 65 
>COG1886 FliN Flagellar motor switch/type III secretory pathway protein [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=21.78  E-value=97  Score=24.47  Aligned_cols=41  Identities=22%  Similarity=0.242  Sum_probs=33.7

Q ss_pred             HHHHhhhcCCCCCccccccccccceee--cCeeeCCCCEEEee
Q 010388          361 AIVKETMRLHPVAPFLVPRAAREDCNV--AGYDIPKGTRVLVS  401 (512)
Q Consensus       361 a~i~EtlRl~p~~~~~~~R~~~~~~~l--~g~~ip~G~~v~~~  401 (512)
                      .-+.|-++|.+....-+.+.+.+++.|  +|+.|-+|..|.+.
T Consensus        84 ~~l~ell~l~~Gsvi~Ld~~~~~~VdI~vNg~~Ig~GEvVvvd  126 (136)
T COG1886          84 MPLGELLALGKGSVIELDKLAGEPVDILVNGRLIGRGEVVVVD  126 (136)
T ss_pred             eeHHHHHhcCCCCEEEcCCcCCCceEEEECCEEEEEEeEEEEC
Confidence            447899999988887788888777665  99999999988863


No 66 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=20.66  E-value=3.2e+02  Score=19.41  Aligned_cols=48  Identities=10%  Similarity=0.077  Sum_probs=39.7

Q ss_pred             hhhHHHHHHHHHhhcccchHHHHHHHHHHHhhChHHHHHHHHHHHHHh
Q 010388          295 RHGVKAFTQDLIAGGTESSAVTVEWAISELIKKPEIFEKAIEELDRVI  342 (512)
Q Consensus       295 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~  342 (512)
                      .+.........++--++.++....-.+.+-++||+..+++.+.+..-+
T Consensus        31 ~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   31 SDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            444555566678888999999999999999999999999999887654


No 67 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=20.03  E-value=2.4e+02  Score=20.27  Aligned_cols=18  Identities=33%  Similarity=0.621  Sum_probs=15.2

Q ss_pred             ChHHHHHHHHHHHHHhcC
Q 010388          327 KPEIFEKAIEELDRVIGK  344 (512)
Q Consensus       327 ~p~~~~~l~~Ei~~~~~~  344 (512)
                      .|+..+.+++||-.++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            499999999999987654


Done!