Citrus Sinensis ID: 010389

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510--
Protein Sequence
MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQEPRQYSQPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWSERSFESDNVSLPGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccEEEcccccccccccccccccccccccEEccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccHccccccccccccccEEEEEcHHHHHHcccEEEHHHccccccccHcHHHccccccccEEEEccccccEEEEEEccccccccccHHHHHccHHHHHHHHccccccccEEEccccccEEEEccHHHHHcccccccEEcccccEEEccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccHHHHHcccccccccccccccHHHccccccccHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mpvdlensstasgeasvsstgnqnappkstnkkkrslpgtpdpdaevialspktllATNRFVCEICNkgfqrdqnlqlhrrghnlpwklrqrsnkevkkrvyvcpekscvhhdptralgdltgikkhfcrkhgekkwkcdkcskkyavqsdykahskvcgtkeykcncgavfsrrdsfiTHRAFCDMLTKEsakvqseepnliegmvkpntesdpkvqpvdsststpptavlapaltkstaavsssvspgqssempenspqvveeaplsaalngscsssssssstgtksSSVFASLFASstasatlqpsqtpvLTDLmramapperptdvgsssstdpialclstnpgssifgsggqeprqysqpaMSATALLQKAAQMGAAASNATLLRGFGivsssssasahedsvrwsersfesdnvslpglglglpcegssglkelmmgtpsvfgpnkptldflglgmaaggatpgvgrsalvppaggalDVAAGaaslggggggggeiagkdigtss
Flexible Loop (DISEMBL)
mpvdlensstasgeasvsstgnqnappkstnkkkrslpgtpdpdAEVIALSPKTLLATNRFVCEICNKGfqrdqnlqlhrrghnlpwklrqrsnkevKKRVYVcpekscvhhdptralgdltgikkhfcrkhgekkwkcdkcskkYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKesakvqseepnLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASLFASstasatlqpsqTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQEPRQYSQPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWSERSFESDNVSLPGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASlggggggggeiagkdigtss
Low Complexity Region (SEG)
MPVDLENsstasgeasvsstgNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEkkwkcdkcskkYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALtkstaavsssvspgqssEMPENSPQVVEEAPLSAALNgscsssssssstgtksssvfaslfasstasatlQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQEPRQYSQPAMSATALLQKAAQMGAAASNATLLRGFGIVsssssasaHEDSVRWSERSFESDNVslpglglglpcegssglKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPaggaldvaagaaslggggggggeiagkdigTSS
Disordered region (IsUnstruct)
**********************************************VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLT*****************************************************************************************************************************************************************************************************TLLRGFGI*******************************GLGL*****************VFGPNKPTLDFLGLGMAAGGA*********************************************
Disordered Region (DISOPRED)
**********************************************VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQR***EVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKES**********************************************************************************************************************************************************************************ALLQKAAQMGA**************************************************************************DFLG*****************************************************
Disordered Region (DISEMBL)
****************************************PDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC***********KCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKP*******************TAVLAPAL******************************************************SVFASLFASSTASATLQPSQTPVLTDLMRAMAP************TDPIALCLSTNPGSSIFGS*************SATALLQKAAQMGAAASNATLLRGFGIV***********************NVSLPGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS
Disordered Region (DISPRO)
*************************************PGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESA***********************************************************************************************************TASATLQPSQTPVL**************************************************************AQMGA*********************************************LGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGG***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQEPRQYSQPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWSERSFESDNVSLPGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	512	2.2.26 [Sep-21-2011]
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.324	0.328	0.825	2e-89
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.324	0.356	0.795	8e-86
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.269	0.276	0.357	1e-20
Q943I6	522	Zinc finger protein STOP1	no	no	0.269	0.264	0.34	2e-20
Q2QX40	465	Zinc finger protein STAR3	no	no	0.269	0.296	0.333	4e-19
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.271	0.458	0.328	5e-14
Q6P9S1	818	ATM interactor OS=Mus mus	yes	no	0.171	0.107	0.355	3e-12
O43313	823	ATM interactor OS=Homo sa	yes	no	0.171	0.106	0.344	5e-12
Q6NSZ9	544	Zinc finger protein 498 O	no	no	0.328	0.308	0.279	4e-08
Q8BXX2	756	Zinc finger and BTB domai	no	no	0.302	0.205	0.268	1e-07

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score =  330 bits (845), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 137/166 (82%), Positives = 158/166 (95%)

Query: 32  KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
           KKKR+LPG PDP+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 41  KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100

Query: 92  RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 151
           R++KEV+KRVYVCPEKSCVHH PTRALGDLTGIKKHFCRKHGEKKWKC+KC+K+YAVQSD
Sbjct: 101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 160

Query: 152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQS 197
           +KAHSK CGT+EY+C+CG +FSRRDSFITHRAFCD L +E+A++ +
Sbjct: 161 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNA 206

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score =  318 bits (814), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 132/166 (79%), Positives = 155/166 (93%)

Query: 32  KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
           KKKR+LPG PDP+AEVIALSP TL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 37  KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96

Query: 92  RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 151
           R++KEV+KRVYVCPEK+CVHH  +RALGDLTGIKKHFCRKHGEKKW C+KC+K+YAVQSD
Sbjct: 97  RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSD 156

Query: 152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQS 197
           +KAHSK CGT+EY+C+CG +FSRRDSFITHRAFCD L +E+AK+ +
Sbjct: 157 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINA 202

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score =  101 bits (252), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 16/154 (10%)

Query: 46  EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL---RQRSNKE------ 96
           E++ L  + +LA +   C IC KGF+RD NL++H RGH   +K      + NKE      
Sbjct: 229 EILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSE 288

Query: 97  --VKKRVYVCPEKSC---VHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQS 150
             + KR Y CP   C     H   + L  +  +K H+ R H +K + C +C +KK++V +
Sbjct: 289 PMLIKR-YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIA 347

Query: 151 DYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAF 184
           D K H K CG  ++ C+CG  FSR+D    H A 
Sbjct: 348 DLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score =  100 bits (250), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 12/150 (8%)

Query: 47  VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL--------RQRSNKEVK 98
           V+ L  + +LA +   C IC KGF+RD NL++H RGH   +K         +  S +   
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327

Query: 99  KRVYVCPEKSCV---HHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSDYKA 154
              Y CP   C     H   + L  +  +K H+ R H +K + C +C +KK++V +D K 
Sbjct: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387

Query: 155 HSKVCGTKEYKCNCGAVFSRRDSFITHRAF 184
           H K CG  ++ C+CG  FSR+D    H A 
Sbjct: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score = 96.7 bits (239), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 15/153 (9%)

Query: 47  VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK-----------LRQRSNK 95
           V+ L    +LA +   C IC KGF+RD NL++H RGH   +K                  
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274

Query: 96  EVKKRVYVCPEKSCVH---HDPTRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSD 151
              +R Y CP   C     H   + L  +  +K H+ R H EK+  C +C +K+++V +D
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMAD 334

Query: 152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAF 184
            K H K CG   + C+CG  FSR+D    H A 
Sbjct: 335 LKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVAL 367

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 79.7 bits (195), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 10/149 (6%)

Query: 45  AEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKR---- 100
           A  I    + L+    F C +C K F R  NLQ+H  GH   ++    S K  + R    
Sbjct: 129 AYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLG 188

Query: 101 --VYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHS 156
              Y C E  ++ + H  ++ L D   ++ H+ RKHG K + C  C K  AV+ D++ H 
Sbjct: 189 IPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHE 248

Query: 157 KVCGTKEYKCNCGAVFSRRDSFITH-RAF 184
           K CG K + C CG+ F  + S   H +AF
Sbjct: 249 KNCG-KRWVCVCGSDFKHKRSLKDHVKAF 276

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6P9S1|ATMIN_MOUSE ATM interactor OS=Mus musculus GN=Atmin PE=2 SV=2

 Score = 73.9 bits (180), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 2/90 (2%)

Query: 92  RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 151
           R +     + Y CP K C    P R     + +K+HF + H EKK KC KCS  Y  + D
Sbjct: 117 RKDLTTAPKFYCCPIKGCPR-GPDRPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWD 175

Query: 152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITH 181
            K H + CG K ++C CG  ++ R +  +H
Sbjct: 176 LKRHEEDCG-KTFQCTCGCPYASRTALQSH 204

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Mus musculus (taxid: 10090)

>sp|O43313|ATMIN_HUMAN ATM interactor OS=Homo sapiens GN=ATMIN PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 92  RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 151
           R + +   + Y CP + C    P R     + +K+HF + H EKK KC KCS  Y  + D
Sbjct: 121 RKDLKTGPKFYCCPIEGCPR-GPERPFSQFSLVKQHFMKMHAEKKHKCSKCSNSYGTEWD 179

Query: 152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITH 181
            K H++ CG K ++C CG  ++ R +  +H
Sbjct: 180 LKRHAEDCG-KTFRCTCGCPYASRTALQSH 208

Plays a crucial role in cell survival and RAD51 foci formation in response to methylating DNA damage. Involved in regulating the activity of ATM in the absence of DNA damage. May play a role in stabilizing ATM.

Homo sapiens (taxid: 9606)

>sp|Q6NSZ9|ZN498_HUMAN Zinc finger protein 498 OS=Homo sapiens GN=ZNF498 PE=2 SV=3

 Score = 60.1 bits (144), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 73/193 (37%), Gaps = 25/193 (12%)

Query: 8   SSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR---FVCE 64
           +S   GEAS+   G      +       S PG P P    I L  +    ++    F C 
Sbjct: 292 TSERFGEASLQGPGLGRVCEQEPGGPAGSAPGLPPPQHGAIPLPDEVKTHSSFWKPFQCP 351

Query: 65  ICNKGFQRDQNLQLHRRGHN--------------LPWKLRQRSNKEVKKRVYVCPEKSCV 110
            C KGF R  NL  H+R H               L   L +     + KR YVC E  C 
Sbjct: 352 ECGKGFSRSSNLVRHQRTHEEKSYGCVECGKGFTLREYLMKHQRTHLGKRPYVCSE--C- 408

Query: 111 HHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
                +       ++ H     GEK +KC  C K ++ +   + H +   G K Y C CG
Sbjct: 409 ----WKTFSQRHHLEVHQRSHTGEKPYKCGDCWKSFSRRQHLQVHRRTHTGEKPYTCECG 464

Query: 170 AVFSRRDSFITHR 182
             FSR  +   HR
Sbjct: 465 KSFSRNANLAVHR 477

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BXX2|ZBT49_MOUSE Zinc finger and BTB domain-containing protein 49 OS=Mus musculus GN=Zbtb49 PE=2 SV=1

 Score = 58.9 bits (141), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 50/205 (24%)

Query: 10  TASGEASVSSTGNQNAPPKSTNK------KKRSLPGTP----DPDAEVIALSPKTLLATN 59
           +A+ E +V   G+Q A  K   +      ++  LPG P    DP     AL P+      
Sbjct: 333 SAAKEDAVERAGSQTAEEKGRGELGPESSREEELPGAPASWEDPSQ---ALQPQ-----K 384

Query: 60  RFVCEICNKGFQRDQNLQLHRRGH-------------------NLPWKLRQRSNKEVKKR 100
           ++ CE+C K F+   NL+LH+R H                   NL   LR+ S     ++
Sbjct: 385 QYACELCGKPFKHPSNLELHKRSHTGEKPFECNICGKHFSQAGNLQTHLRRHSG----EK 440

Query: 101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-C 159
            Y+C     +      A GD   +++H     GEK   CD C + ++  S+ K H K   
Sbjct: 441 PYICE----ICGKRFAASGD---VQRHIIIHSGEKPHLCDTCGRGFSNFSNLKEHKKTHT 493

Query: 160 GTKEYKCN-CGAVFSRRDSFITHRA 183
             K + C+ CG  F+ +   + HR 
Sbjct: 494 ADKVFTCDECGKSFNMQRKLVKHRV 518

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	512
427199310	514	zinc finger protein [Morella rubra]	0.982	0.978	0.701	0.0
359476719	506	PREDICTED: uncharacterized protein LOC10	0.964	0.976	0.680	0.0
224133852	505	predicted protein [Populus trichocarpa]	0.949	0.962	0.660	1e-175
302398707	528	C2H2L domain class transcription factor	0.986	0.956	0.654	1e-175
356496771	517	PREDICTED: uncharacterized protein LOC10	0.976	0.967	0.638	1e-171
297735188	492	unnamed protein product [Vitis vinifera]	0.921	0.959	0.643	1e-170
449451507	507	PREDICTED: uncharacterized protein LOC10	0.935	0.944	0.649	1e-164
449531926	507	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.935	0.944	0.647	1e-163
356559410	511	PREDICTED: uncharacterized protein LOC10	0.951	0.953	0.630	1e-163
156070798	524	unknown [Solanum bulbocastanum]	0.951	0.929	0.591	1e-161

>gi|427199310|gb|AFY26885.1| zinc finger protein [Morella rubra]

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/523 (70%), Positives = 419/523 (80%), Gaps = 20/523 (3%)

Query: 1   MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
           MPVDL+NSSTASGEASVSS+GNQ+ PPK T KKKR+LPG PDPDAEVIALSPKTL+ATNR
Sbjct: 1   MPVDLDNSSTASGEASVSSSGNQSQPPKPTAKKKRNLPGMPDPDAEVIALSPKTLMATNR 60

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
           FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KEVKKRVYVCPE SCVHHDP+RALGD
Sbjct: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEPSCVHHDPSRALGD 120

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
           LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRRDSFIT
Sbjct: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFIT 180

Query: 181 HRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKST 240
           HRAFCD L +ESA+ Q++     + +V PN ESDP  Q VDSS   PP A   P      
Sbjct: 181 HRAFCDALAEESARAQTQN----QALVNPNKESDPNNQAVDSSPPAPPPAPAQPQPQAQA 236

Query: 241 -------AAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVF 293
                    V SSV P ++ E+PEN PQ++EEAP +  LNGSCSS++SSS  G+ S SVF
Sbjct: 237 PPAPPRPTGVMSSVLPNKNPELPENPPQILEEAPATTGLNGSCSSTTSSSGNGSTSCSVF 296

Query: 294 ASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFG 353
           ASLFASSTASA++Q  QTP  TDL+RAMAPP+ PTD+   SST+ I+LCLSTNPGSS+FG
Sbjct: 297 ASLFASSTASASMQTPQTPAFTDLIRAMAPPDPPTDLARPSSTESISLCLSTNPGSSMFG 356

Query: 354 SGGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRW 410
           + GQE RQY+   QPAMSATALLQKAAQMGAAA+NA+ LRGFGIVSS+SS S  +D + W
Sbjct: 357 NAGQERRQYTAPPQPAMSATALLQKAAQMGAAATNASFLRGFGIVSSTSS-SGQQDGLHW 415

Query: 411 SERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATP 469
           S+R  E +N S+  GLGLG  C+G SGLKELMMGTPSVFGP + TLDFLGLGMAAGG +P
Sbjct: 416 SQRQVEPENSSVAAGLGLGH-CDGGSGLKELMMGTPSVFGPKQTTLDFLGLGMAAGG-SP 473

Query: 470 GVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS 512
             G SAL+   G  LDVAA AA+      GG E +GKDIG +S
Sbjct: 474 SSGLSALITSIGSGLDVAAAAAA--AASYGGAEFSGKDIGRNS 514

Source: Morella rubra

Species: Morella rubra

Genus: Morella

Family: Myricaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476719|ref|XP_002271958.2| PREDICTED: uncharacterized protein LOC100263342 isoform 2 [Vitis vinifera]

 Score =  640 bits (1650), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/519 (68%), Positives = 409/519 (78%), Gaps = 25/519 (4%)

Query: 1   MPVDLENSS-----TASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTL 55
           MPVDL+NSS     TASGEASVSSTGNQ APPK   KKKR+LPG PDPDAEVIALSPKTL
Sbjct: 1   MPVDLDNSSAMTVSTASGEASVSSTGNQPAPPKPAPKKKRNLPGMPDPDAEVIALSPKTL 60

Query: 56  LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPT 115
           +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KEV+KRVYVCPE SCVHH+P+
Sbjct: 61  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPSCVHHEPS 120

Query: 116 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRR 175
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRR 180

Query: 176 DSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPA 235
           DSFITHRAFCD L +ESAK Q++       +  PN++ DPK   ++S    PP       
Sbjct: 181 DSFITHRAFCDALAEESAKTQTQ-----TAVANPNSDEDPK---IESPPPPPPPPPPPAP 232

Query: 236 LTKSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSA-ALNGSCSSSSSSSSTGTKSSSVFA 294
               + AV S+V P QS E+PEN  Q++EEAP +A  LN SCSSS+SSSS GT SSS FA
Sbjct: 233 AVAPSTAVISAVLPIQSPELPENPTQILEEAPPAATGLNASCSSSTSSSSNGTTSSSAFA 292

Query: 295 SLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGS 354
           SLF SSTASA+LQ  Q    + L R M  P+RPT++  SSST+PI+LCLSTN GSSIFG+
Sbjct: 293 SLFVSSTASASLQQPQATGFSGLSRVMTRPDRPTELTPSSSTEPISLCLSTNHGSSIFGT 352

Query: 355 GGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWS 411
            GQE RQY+   QPAMSATALLQKAAQMGAAA+NA+LLRGFGIVSS+SS S  +++++W+
Sbjct: 353 AGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSTSS-SGQQENLQWN 411

Query: 412 ERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPG 470
            +  E ++ S+  GLGLGLPC+  SGLKELMMGTPS+FGP + TLD LGLGMAA G +P 
Sbjct: 412 RQQMEPESTSVAAGLGLGLPCDEGSGLKELMMGTPSLFGPKQTTLDLLGLGMAASG-SPS 470

Query: 471 VGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIG 509
            G SAL+   GG LDVAA AA+       GGE AGKD+G
Sbjct: 471 GGLSALITSIGGGLDVAAAAATY-----RGGEFAGKDMG 504

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133852|ref|XP_002327696.1| predicted protein [Populus trichocarpa] gi|222836781|gb|EEE75174.1| predicted protein [Populus trichocarpa]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 350/530 (66%), Positives = 398/530 (75%), Gaps = 44/530 (8%)

Query: 1   MPVDLENSSTASGEASVSSTG----NQNAPPKSTN--KKKRSLPGTP-DPDAEVIALSPK 53
           MPVDL+NS  ASGEASVSS+G     Q  P K+    KKKR+LPG P DP+AEVIALSPK
Sbjct: 1   MPVDLDNSPAASGEASVSSSGYQPSQQQTPSKTVAIAKKKRNLPGMPVDPEAEVIALSPK 60

Query: 54  TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHD 113
           TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+ EVKKRVYVCPE +CVHHD
Sbjct: 61  TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKRVYVCPETTCVHHD 120

Query: 114 PTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFS 173
           P+RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FS
Sbjct: 121 PSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFS 180

Query: 174 RRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLA 233
           RRDSFITHRAFCD L  ESA+ Q++           N ESDPKVQ              +
Sbjct: 181 RRDSFITHRAFCDALADESARAQTQT---PNPNPNHNPESDPKVQ-----------VDSS 226

Query: 234 PALTKSTAAVSSSVSPGQSSEMPENSPQVVEEAP--------LSAALNGSCSSSSSSSST 285
           P        V+  + P    E+P+N  Q++EEAP        ++A  NGSCSSS+SSSS 
Sbjct: 227 PPPAPLPPPVAPDLGP----ELPDNPTQIIEEAPARAPMPATVTAGFNGSCSSSTSSSSN 282

Query: 286 GTKSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLST 345
           G+ +SSVFASLFASSTAS +LQ  QTP  TDL+ AMA P+RPTD+  SSS +PI+LCLST
Sbjct: 283 GSSTSSVFASLFASSTASGSLQTPQTPAFTDLIHAMAHPDRPTDLAPSSSAEPISLCLST 342

Query: 346 NPGSSIFGSGGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSAS 402
           N GSSIFG+ GQE RQY+   QPA+SATALLQKAAQMGAAA+NA+LLRG GIVSSS S S
Sbjct: 343 NHGSSIFGTAGQERRQYAPPPQPAISATALLQKAAQMGAAATNASLLRGLGIVSSSPS-S 401

Query: 403 AHEDSVRWSERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLG 461
             +D+ +W  R  E +N SL  GLGLGLPC+G SGL ELMMGTPS+FGP   TLDFL LG
Sbjct: 402 TQQDNTQWGHRQMEPENASLAAGLGLGLPCDGGSGLNELMMGTPSIFGPKHATLDFLELG 461

Query: 462 MAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTS 511
           MAAGG  P  G SAL+   GG LDVAA AAS      GGGE +GKD+G S
Sbjct: 462 MAAGG-NPSGGLSALITSIGGGLDVAAAAASF-----GGGEFSGKDMGRS 505

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398707|gb|ADL36648.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 350/535 (65%), Positives = 405/535 (75%), Gaps = 30/535 (5%)

Query: 1   MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
           MP D++NS TASGEASVSS+GNQ APPK   KKKR+LPG PDPDAEVIALSPKTLLATNR
Sbjct: 1   MPTDVDNSPTASGEASVSSSGNQTAPPKPATKKKRNLPGMPDPDAEVIALSPKTLLATNR 60

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
           FVCEIC+KGFQRDQNLQLHRRGHNLPWKLRQRS+KEVKKRVYVCPE SCVHHDP+RALGD
Sbjct: 61  FVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVKKRVYVCPEASCVHHDPSRALGD 120

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
           LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRRDSFIT
Sbjct: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFIT 180

Query: 181 HRAFCDMLTKESAKV------QSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAP 234
           HRAFCD L +ESA+V       +         V  N+ESDP+ Q V+S     P+     
Sbjct: 181 HRAFCDALAEESARVPTTTSATAAATTAAATAVNLNSESDPRAQSVNSPPQPLPSPPPPA 240

Query: 235 ---------ALTKSTAAVSSSVSPGQS--SEMPENSPQVVEEAPLSAALN--GSCSSSSS 281
                    ++   +A V SS  P QS   E+PEN  QVVE  P  A      S  SS+S
Sbjct: 241 AAPPQPTTSSVPSQSAGVLSSSPPTQSPVRELPENPTQVVEAVPAVAGRKGNCSSRSSNS 300

Query: 282 SSSTGTKSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIAL 341
           SSS G+ SS VFASLFASST SA+LQP Q P  TDL+RAM  P++ T++  SSS +PI+L
Sbjct: 301 SSSNGSTSSGVFASLFASSTTSASLQPPQQPAFTDLIRAMGHPDQSTNLAPSSSMEPISL 360

Query: 342 CLSTNPGSSIFGSGGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSS 398
            LST+ GSSIF S GQE RQY+   QPAMSATALLQKAAQMGAAA+NA+LLRGFGI+SSS
Sbjct: 361 GLSTSHGSSIFESAGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGFGIMSSS 420

Query: 399 SSASAHEDSVRWSERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDF 457
           +S++  ++S++W++R  E DNVS+  GLGLGLPC+G SG KELMMG+P +FGP + TLD 
Sbjct: 421 TSSTQ-QESMQWNQRPAEPDNVSVAAGLGLGLPCDGGSGWKELMMGSPPMFGPKQTTLDL 479

Query: 458 LGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS 512
           LGLGMAAG   P  G SAL+   GG LDVAA AAS      GGGE +GKD+  SS
Sbjct: 480 LGLGMAAGN-NPSSGLSALITSIGGGLDVAAAAASY-----GGGEYSGKDLARSS 528

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496771|ref|XP_003517239.1| PREDICTED: uncharacterized protein LOC100806404 [Glycine max]

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 337/528 (63%), Positives = 399/528 (75%), Gaps = 28/528 (5%)

Query: 1   MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
           MPVDL+N STASGEASVSS+GN   PPK T KKKR+LPG PDPDAEVIALSPKTL+ATNR
Sbjct: 1   MPVDLDNVSTASGEASVSSSGNLTVPPKPTTKKKRNLPGMPDPDAEVIALSPKTLMATNR 60

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
           FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KEV+KRVYVCPE +CVHHDP+RALGD
Sbjct: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGD 120

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
           LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRRDSFIT
Sbjct: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFIT 180

Query: 181 HRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKST 240
           HRAFCD L +ESA+ Q +       + K ++ESD K    DSS      A        S+
Sbjct: 181 HRAFCDALAEESARSQPQT------VAKASSESDSKAVTGDSSPPVAVEAPPPLVPPVSS 234

Query: 241 AAVSSSVSPG----QSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASL 296
            + S  V       Q  E+PENSPQ++EE  ++ A+NGSCSS+S+S+++ T +S+  AS 
Sbjct: 235 QSNSVVVPSSSLQTQKPELPENSPQIIEEPKVNTAMNGSCSSTSTSTTSSTSNSNSGASS 294

Query: 297 FA-------SSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGS 349
                    SS ++     SQTP  TDL+RAM  P+ P D+   SS++PI+LCL+TN GS
Sbjct: 295 SVFASLFASSSASATASLHSQTPAFTDLIRAMGHPDHPADLSRPSSSEPISLCLATNHGS 354

Query: 350 SIFGSGGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIV-SSSSSASAHE 405
           SIFG+G QE RQY+   QPAMSATALLQKAAQMGAAA+NA+ LRG GIV SS+S++S  +
Sbjct: 355 SIFGTGRQERRQYAPPPQPAMSATALLQKAAQMGAAATNASFLRGLGIVSSSASTSSVQQ 414

Query: 406 DSVRWSERSFESDNVSLP-GLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAA 464
           D+++W  +  E ++ S+P GLGLGLPC+ SSGLKELMMGTPS+FGP + TLDFLGLGMAA
Sbjct: 415 DNLQWGHQPVEPESASVPAGLGLGLPCDSSSGLKELMMGTPSMFGPKQTTLDFLGLGMAA 474

Query: 465 GGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS 512
           GG TPG G SAL+   GG LDV   AAS        GE  GKDIG  S
Sbjct: 475 GG-TPGGGLSALITSIGGGLDVTTAAASF-----ASGEFPGKDIGRRS 516

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735188|emb|CBI17550.3| unnamed protein product [Vitis vinifera]

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 336/522 (64%), Positives = 391/522 (74%), Gaps = 50/522 (9%)

Query: 1   MPVDLENSS-----TASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTL 55
           MPVDL+NSS     TASGEASVSSTGNQ APPK   KKKR+LPG PDPDAEVIALSPKTL
Sbjct: 1   MPVDLDNSSAMTVSTASGEASVSSTGNQPAPPKPAPKKKRNLPGMPDPDAEVIALSPKTL 60

Query: 56  LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPT 115
           +ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KEV+KRVYVCPE SCVHH+P+
Sbjct: 61  MATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPSCVHHEPS 120

Query: 116 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRR 175
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRR 180

Query: 176 DSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPA 235
           DSFITHRAFCD L +ESAK Q++       +  PN++ DPK   ++S    PP       
Sbjct: 181 DSFITHRAFCDALAEESAKTQTQ-----TAVANPNSDEDPK---IESPPPPPPPPPPPAP 232

Query: 236 LTKSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSA-ALNGSCSSSSSSSSTGTKSSSVFA 294
               + AV S+V P QS E+PEN  Q++EEAP +A  LN SCSSS+SSSS  T       
Sbjct: 233 AVAPSTAVISAVLPIQSPELPENPTQILEEAPPAATGLNASCSSSTSSSSNATG------ 286

Query: 295 SLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGS 354
                               + L R M  P+RPT++  SSST+PI+LCLSTN GSSIFG+
Sbjct: 287 -------------------FSGLSRVMTRPDRPTELTPSSSTEPISLCLSTNHGSSIFGT 327

Query: 355 GGQEPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWS 411
            GQE RQY+   QPAMSATALLQKAAQMGAAA+NA+LLRGFGIVSS+SS S  +++++W+
Sbjct: 328 AGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSTSS-SGQQENLQWN 386

Query: 412 ERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPG 470
            +  E ++ S+  GLGLGLPC+  SGLKELMMGTPS+FGP + TLD LGLGMAA G +P 
Sbjct: 387 RQQMEPESTSVAAGLGLGLPCDEGSGLKELMMGTPSLFGPKQTTLDLLGLGMAASG-SPS 445

Query: 471 VGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS 512
            G SAL+   GG LDVAA AA+       GGE AGKD+G  S
Sbjct: 446 GGLSALITSIGGGLDVAAAAATY-----RGGEFAGKDMGRVS 482

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451507|ref|XP_004143503.1| PREDICTED: uncharacterized protein LOC101217597 [Cucumis sativus]

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 320/493 (64%), Positives = 380/493 (77%), Gaps = 14/493 (2%)

Query: 1   MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
           MP DLENS + SGE +VSS GN + PPKST KKKR+LPG PDPDAEVIALSPKTLLATNR
Sbjct: 1   MPADLENSPSVSGEPTVSSLGNTDPPPKSTVKKKRNLPGMPDPDAEVIALSPKTLLATNR 60

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
           FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+ EVKK+VYVCPE SCVHHDP+RALGD
Sbjct: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKKVYVCPETSCVHHDPSRALGD 120

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
           LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRRDSFIT
Sbjct: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFIT 180

Query: 181 HRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPK-VQPVDSS--TSTPPTAVLAPALT 237
           HRAFCD L +ESAK Q +  +L++   KP + S  K V+PV+ +   S PP+   A +  
Sbjct: 181 HRAFCDALAEESAKAQPQ--SLVD---KPVSNSSQKAVEPVEPNPKLSPPPSPPAAASPP 235

Query: 238 KSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASLF 297
           +S   +S  V P QS +  EN  Q  EEAP++  ++GS  SSS S S+ + SSS FASLF
Sbjct: 236 QSACVLSPPVLPIQSQDQSENPSQYNEEAPVTTGMSGS-CSSSKSPSSNSSSSSRFASLF 294

Query: 298 ASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQ 357
           AS+T S +LQP Q P  TD++  MA  +  +D   ++ST+PI+LCLST  G+SIFG+  Q
Sbjct: 295 ASTTTSISLQPPQPPAFTDMIHVMACSDPSSDYAPTTSTEPISLCLSTTHGASIFGAASQ 354

Query: 358 EPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWSERS 414
           + RQY+   QPAMSATALLQKAAQMGAAASNA+ LRG G+V SSSSA+  E S  W++R 
Sbjct: 355 DLRQYTPAPQPAMSATALLQKAAQMGAAASNASFLRGLGLVPSSSSATPQESSP-WNQRQ 413

Query: 415 FESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGR 473
            E D +S+  GLGLGLPC+G+SGLKELM G  S+F P   TLDFLGLGMAAGG+    G 
Sbjct: 414 VEPDGISIAAGLGLGLPCDGNSGLKELMRGNHSLFAPKHTTLDFLGLGMAAGGSPNNRGL 473

Query: 474 SALVPPAGGALDV 486
           +AL+   GG +DV
Sbjct: 474 AALITSIGGGMDV 486

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531926|ref|XP_004172936.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228313 [Cucumis sativus]

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/493 (64%), Positives = 379/493 (76%), Gaps = 14/493 (2%)

Query: 1   MPVDLENSSTASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
           MP DLENS + SGE +VSS GN + PPKST K KR+LPG PDPDAEVIALSPKTLLATNR
Sbjct: 1   MPADLENSPSVSGEPTVSSLGNTDPPPKSTVKXKRNLPGMPDPDAEVIALSPKTLLATNR 60

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
           FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+ EVKK+VYVCPE SCVHHDP+RALGD
Sbjct: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKKVYVCPETSCVHHDPSRALGD 120

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
           LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSK+CGT+EYKC+CG +FSRRDSFIT
Sbjct: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFIT 180

Query: 181 HRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPK-VQPVDSS--TSTPPTAVLAPALT 237
           HRAFCD L +ESAK Q +  +L++   KP + S  K V+PV+ +   S PP+   A +  
Sbjct: 181 HRAFCDALAEESAKAQPQ--SLVD---KPVSNSSQKAVEPVEPNPKLSPPPSPPAAASPP 235

Query: 238 KSTAAVSSSVSPGQSSEMPENSPQVVEEAPLSAALNGSCSSSSSSSSTGTKSSSVFASLF 297
           +S   +S  V P QS +  EN  Q  EEAP++  ++GS  SSS S S+ + SSS FASLF
Sbjct: 236 QSACVLSPPVLPIQSQDQSENPSQYNEEAPVTTGMSGS-CSSSKSPSSNSSSSSRFASLF 294

Query: 298 ASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGSGGQ 357
           AS+T S +LQP Q P  TD++  MA  +  +D   ++ST+PI+LCLST  G+SIFG+  Q
Sbjct: 295 ASTTTSISLQPPQPPAFTDMIHVMACSDPSSDYAPTTSTEPISLCLSTTHGASIFGAASQ 354

Query: 358 EPRQYS---QPAMSATALLQKAAQMGAAASNATLLRGFGIVSSSSSASAHEDSVRWSERS 414
           + RQY+   QPAMSATALLQKAAQMGAAASNA+ LRG G+V SSSSA+  E S  W++R 
Sbjct: 355 DLRQYTPAPQPAMSATALLQKAAQMGAAASNASFLRGLGLVPSSSSATPQESSP-WNQRQ 413

Query: 415 FESDNVSL-PGLGLGLPCEGSSGLKELMMGTPSVFGPNKPTLDFLGLGMAAGGATPGVGR 473
            E D +S+  GLGLGLPC+G+SGLKELM G  S+F P   TLDFLGLGMAAGG+    G 
Sbjct: 414 VEPDGISIAAGLGLGLPCDGNSGLKELMRGNHSLFAPKHTTLDFLGLGMAAGGSPNNRGL 473

Query: 474 SALVPPAGGALDV 486
           +AL+   GG +DV
Sbjct: 474 AALITSIGGGMDV 486

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559410|ref|XP_003547992.1| PREDICTED: uncharacterized protein LOC100783947 [Glycine max]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 338/536 (63%), Positives = 405/536 (75%), Gaps = 49/536 (9%)

Query: 1   MPVDLENSSTASGEA-SVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATN 59
           MPVDL+N+STASGEA SVSS+G+Q  P  +  KKKR+LPG PDP+AEVIALSP  LLATN
Sbjct: 1   MPVDLDNASTASGEAASVSSSGHQTKP--AVPKKKRNLPGMPDPEAEVIALSPTALLATN 58

Query: 60  RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALG 119
           RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS+KEV+KRVYVCPE +CVHHDP RALG
Sbjct: 59  RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPARALG 118

Query: 120 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFI 179
           DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD+KAHSKVCGT+EYKC+CG VFSRRDSFI
Sbjct: 119 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKVCGTREYKCDCGTVFSRRDSFI 178

Query: 180 THRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALTKS 239
           THRAFCD+L +E+ +  +        +VK N+E+D KV  +  +  +PP   ++  +  +
Sbjct: 179 THRAFCDVLAEENVRSHA--------VVKDNSENDSKV--LTLTGDSPPLQPVSATVATT 228

Query: 240 TAAVSSSVSPG---QSSEMPE-NSPQVVEEAPLSA-ALNGSCSSSSSSSSTG-------T 287
           T   +S++S G   Q+ E+PE N PQV+EE P  A A++GSC S+S+ S++         
Sbjct: 229 TTQTNSAMSCGLQTQNLELPETNPPQVIEEEPQGATAVSGSCGSNSTCSTSNGGATSNSN 288

Query: 288 KSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPTDVGSS-SSTDPIALCLSTN 346
            SSSVFA LFASSTAS +LQ SQTP  +DL+RAM PPE P D+ S+ SS++ I+LCLST 
Sbjct: 289 SSSSVFAGLFASSTASGSLQ-SQTPAFSDLIRAMGPPEHPADLISAPSSSEAISLCLSTT 347

Query: 347 PGSSIFGSGGQEPRQYS----QPAMSATALLQKAAQMGAAASNATLLRGFGIV---SSSS 399
             S IF +GGQ   QY     QPAMSATALLQKAAQMGAAA+NA+LLRGFGIV   S +S
Sbjct: 348 SASPIFATGGQ---QYVSSPPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSSSLAS 404

Query: 400 SASAHEDSVRWSERSFESDNVSLP--GLGLGLPCE-GSSGLKELMMGTPSVFGPNKPTLD 456
           ++S  ++ ++W ++  ES++ S+P  GLGLGLPCE G SGLKELMMGTPS+FGP   TLD
Sbjct: 405 TSSGQQNGLQWGQQQLESESGSVPAAGLGLGLPCEDGGSGLKELMMGTPSMFGPKHTTLD 464

Query: 457 FLGLGMAAGGATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEIAGKDIGTSS 512
           FLGLGMAAGG   G G SAL+   GG LDV A          G G+ +GKDIG SS
Sbjct: 465 FLGLGMAAGGTA-GGGLSALITSIGGGLDVTAAF--------GNGDFSGKDIGGSS 511

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156070798|gb|ABU45210.1| unknown [Solanum bulbocastanum]

 Score =  576 bits (1484), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 325/549 (59%), Positives = 385/549 (70%), Gaps = 62/549 (11%)

Query: 1   MPVDLENSS-----TASGEASVSSTGNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTL 55
           MP D +NSS     T SGEASVSS+GNQ  P K + KKKR+LPG PDPDAEVIALSP TL
Sbjct: 1   MPADPDNSSAMNDSTGSGEASVSSSGNQAVPLKESAKKKRNLPGMPDPDAEVIALSPTTL 60

Query: 56  LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPT 115
           +ATNRFVCEIC+KGFQRDQNLQLHRRGHNLPWKLRQRS+ EVKKRVYVCPE SCVHHDP+
Sbjct: 61  MATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRSSNEVKKRVYVCPESSCVHHDPS 120

Query: 116 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNCGAVFSRR 175
           RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD KAHSK+CGT+EYKC+CG +FSRR
Sbjct: 121 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDLKAHSKICGTREYKCDCGTLFSRR 180

Query: 176 DSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPV--------------- 220
           DSFITHRAFCD L +ESAK   E+         P+T  +PK Q V               
Sbjct: 181 DSFITHRAFCDALAQESAKALPEK--------LPSTNEEPKTQAVASSSPPSTPPAPPPA 232

Query: 221 ---DSSTSTPPTAVLAPALTKSTAAVSSSVSPGQSSEMPENS---------PQVVEEAPL 268
                     P  ++ P +  ST  V S  S  Q+ E+ ENS          QV+EEA  
Sbjct: 233 TESQPPPPAAPKPLMTPTVPPST--VMSFASSVQNRELRENSITNSAGTSTKQVLEEAAA 290

Query: 269 SAALNGSCSSSSSSSSTGTKSSSVFASLFASSTASATLQPSQTPVLTDLMRAMAPPERPT 328
            A+L     + SSS S G+ SSSVF SLFASSTAS  L PSQ PV +D+ RAM+ PER  
Sbjct: 291 VASLT---GNCSSSCSNGSSSSSVFGSLFASSTASGNL-PSQAPVYSDMFRAMS-PERTL 345

Query: 329 DVGSSSSTDPIALCLSTNPGSSIFGSGGQEPRQYS---QPAMSATALLQKAAQMGAAASN 385
           ++ S SST+PI+L L+ +  SSIF   GQE RQY+   QPAMSATALLQKAAQMGAAA++
Sbjct: 346 EMASPSSTEPISLGLAMSHSSSIFRPAGQERRQYAPAPQPAMSATALLQKAAQMGAAATS 405

Query: 386 ATLLRGFGIVSSSSSASAHEDSVRWSERSFESDNVSL-PGLGLGLPCEGSSGLKELMMGT 444
           ++ LRGFG++SS+SS++ H++   WS R  +++  S   GLGLGLPC+  SGLKELM+GT
Sbjct: 406 SSFLRGFGVMSSTSSSNRHQE---WSGRPIDANGASYAAGLGLGLPCDAGSGLKELMLGT 462

Query: 445 PSVFGPNKPTLDFLGLGMAAG-GATPGVGRSALVPPAGGALDVAAGAASLGGGGGGGGEI 503
           PS+FGP  PTLD LGLGMAA  G +PG+  SAL+   G  LD+   A S      G  + 
Sbjct: 463 PSMFGPKHPTLDLLGLGMAASVGPSPGL--SALITSMGSNLDMVTSAGSF-----GTADF 515

Query: 504 AGKDIGTSS 512
           +GKD+G +S
Sbjct: 516 SGKDLGRNS 524

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	512
TAIR|locus:2101739	452	IDD2 "AT3G50700" [Arabidopsis	0.507	0.575	0.596	5.2e-102
TAIR|locus:2173624	500	IDD1 "AT5G66730" [Arabidopsis	0.753	0.772	0.514	5.2e-97
TAIR|locus:2024193	506	MGP "AT1G03840" [Arabidopsis t	0.324	0.328	0.777	2.2e-78
TAIR|locus:2143543	503	JKD "AT5G03150" [Arabidopsis t	0.351	0.357	0.719	4.6e-78
TAIR|locus:2051698	602	IDD5 "AT2G02070" [Arabidopsis	0.326	0.277	0.741	7.5e-78
TAIR|locus:2078262	446	AT3G45260 "AT3G45260" [Arabido	0.349	0.401	0.714	9.5e-78
TAIR|locus:2205672	455	IDD7 "AT1G55110" [Arabidopsis	0.388	0.437	0.651	1.5e-77
TAIR|locus:2167608	466	NUC "AT5G44160" [Arabidopsis t	0.324	0.356	0.753	2.2e-76
TAIR|locus:2051688	516	IDD4 "indeterminate(ID)-domain	0.332	0.329	0.705	5.9e-76
TAIR|locus:2132397	402	IDD12 "AT4G02670" [Arabidopsis	0.343	0.437	0.705	1.3e-74

TAIR|locus:2101739 IDD2 "AT3G50700" [Arabidopsis thaliana (taxid:3702)]

 Score = 832 (297.9 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
 Identities = 164/275 (59%), Positives = 185/275 (67%)

Query:     1 MPVDLENXXXXX--XXXXXXXXXNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLAT 58
             MPVDL+N                NQN  P ST KKKR+LPG PDP++EVIALSPKTLLAT
Sbjct:     1 MPVDLDNSSTVSGEASVSISSTGNQNPLPNSTGKKKRNLPGMPDPESEVIALSPKTLLAT 60

Query:    59 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRAL 118
             NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ+SNKEVKK+VYVCPE SCVHHDP+RAL
Sbjct:    61 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRAL 120

Query:   119 GDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSF 178
             GDLTGIKKHFCRKHGE           YAVQSD+KAHSK+CGTKEYKC+CG +FSRRDSF
Sbjct:   121 GDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSF 180

Query:   179 ITHRAFCDMLTKESAKVQSEEPNLIEGMVKPNTESDPKVQPVDSSTSTPPTAVLAPALXX 238
             ITHRAFCD L +E+A+    +        K N E   +  PV       P  V AP    
Sbjct:   181 ITHRAFCDALAEENARSHHSQSK------KQNPEILTRKNPV-------PNPVPAPVDTE 227

Query:   239 XXXXXXXXXXXXXXXEMPENSPQVVEEAPLSAALN 273
                            E P+  P++V+EAP   +LN
Sbjct:   228 SAKIKSSSTLTIKQSESPKTPPEIVQEAPKPTSLN 262

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2173624 IDD1 "AT5G66730" [Arabidopsis thaliana (taxid:3702)]

 Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
 Identities = 209/406 (51%), Positives = 244/406 (60%)

Query:     1 MPVDLENXXXXXXXXXXXXXXNQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNR 60
             MPVDL+N              NQN  PKS  KKKR+LPG PDPDAEVIALSPKTL+ATNR
Sbjct:     1 MPVDLDNSSTVSGDASVSSTGNQNLTPKSVGKKKRNLPGMPDPDAEVIALSPKTLMATNR 60

Query:    61 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
             FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRS KEV+K+VYVCP   CVHHDP+RALGD
Sbjct:    61 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALGD 120

Query:   121 LTGIKKHFCRKHGEXXXXXXXXXXXYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFIT 180
             LTGIKKHFCRKHGE           YAVQSD+KAHSK+CGTKEYKC+CG +FSRRDSFIT
Sbjct:   121 LTGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKEYKCDCGTLFSRRDSFIT 180

Query:   181 HRAFCDMLTKESAKVQSEEPNLI-EGMVKPNTESDPKVQP-VDSSTS----TPPTAVLAP 234
             HRAFCD L +ESAK  ++   L  E + + N E + K    V+SS S    +PP+  +AP
Sbjct:   181 HRAFCDALAEESAKNHTQSKKLYPETVTRKNPEIEQKSPAAVESSPSLPPSSPPSVAIAP 240

Query:   235 ALXXXXXXXXXXXXXXXXXEMPENSPQVVEEAPLSAALNXXXXXXXXXXXXXXXXXXXXX 294
             A                   + +NSP+  E       +                      
Sbjct:   241 APAISVETESVKIISSSVLPI-QNSPESQENNNHPEVI-IEEASRTIGFNVSSSDLSNDH 298

Query:   295 XXXXXXXXXXXXQPSQTPVLTDLMRAMAPPERPTDVGSSSSTDPIALCLSTNPGSSIFGS 354
                           + +P L     A      P+    SSS +PI+LCLSTNP  S+FG 
Sbjct:   299 SNNNGGYAGLFVSSTASPSLYASSTAS-----PSLFAPSSSMEPISLCLSTNP--SLFGP 351

Query:   355 GGQEPRQY-----SQPAMSATALLQKAAQMGAAASNATLLRGFGIV 395
               ++P  +      QPAMSATALLQKAAQMG+  S  +LLRG GIV
Sbjct:   352 TIRDPPHFLTPLPPQPAMSATALLQKAAQMGSTGSGGSLLRGLGIV 397

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009937 "regulation of gibberellic acid mediated signaling pathway" evidence=IMP

GO:0010029 "regulation of seed germination" evidence=IMP

GO:0010431 "seed maturation" evidence=IMP

TAIR|locus:2024193 MGP "AT1G03840" [Arabidopsis thaliana (taxid:3702)]

 Score = 733 (263.1 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
 Identities = 129/166 (77%), Positives = 147/166 (88%)

Query:    32 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
             KKKR+LPG PDP+AEVIALSPKTL+ATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct:    41 KKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQ 100

Query:    92 RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSD 151
             R++KEV+KRVYVCPEKSCVHH PTRALGDLTGIKKHFCRKHGE           YAVQSD
Sbjct:   101 RTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQSD 160

Query:   152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQS 197
             +KAHSK CGT+EY+C+CG +FSRRDSFITHRAFCD L +E+A++ +
Sbjct:   161 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNA 206

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2143543 JKD "AT5G03150" [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
 Identities = 131/182 (71%), Positives = 152/182 (83%)

Query:    22 NQNAPPKSTN-KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHR 80
             N NA P S++ KKKR+ PGTPDPDA+VIALSP TL+ATNRFVCEICNKGFQRDQNLQLHR
Sbjct:    42 NPNAKPNSSSAKKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHR 101

Query:    81 RGHNLPWKLRQRSNKEV-KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXX 139
             RGHNLPWKL+QRS +EV KK+VY+CP K+CVHHD +RALGDLTGIKKH+ RKHGE     
Sbjct:   102 RGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKC 161

Query:   140 XXXXXXYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEE 199
                   YAVQSD+KAH+K CGT+EYKC+CG +FSR+DSFITHRAFCD LT+E A++ S  
Sbjct:   162 EKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLS 221

Query:   200 PN 201
              N
Sbjct:   222 NN 223

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0010075 "regulation of meristem growth" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0048364 "root development" evidence=IMP

GO:0051302 "regulation of cell division" evidence=IMP

GO:0045604 "regulation of epidermal cell differentiation" evidence=IMP

GO:0048527 "lateral root development" evidence=RCA

GO:0048589 "developmental growth" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2051698 IDD5 "AT2G02070" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
 Identities = 126/170 (74%), Positives = 146/170 (85%)

Query:    25 APPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN 84
             APP+   KKKR+ P TP+ DAEVIALSPKTL+ATNRF+CE+CNKGFQR+QNLQLHRRGHN
Sbjct:    48 APPQ---KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHN 104

Query:    85 LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXX 144
             LPWKL+Q+S KEVK++VY+CPE SCVHHDP+RALGDLTGIKKH+ RKHGE          
Sbjct:   105 LPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSK 164

Query:   145 XYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAK 194
              YAVQSD+KAHSK CGTKEY+C+CG +FSRRDSFITHRAFCD L +ESA+
Sbjct:   165 RYAVQSDWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESAR 214

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0006417 "regulation of translation" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2078262 AT3G45260 "AT3G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 724 (259.9 bits), Expect = 9.5e-78, Sum P(2) = 9.5e-78
 Identities = 130/182 (71%), Positives = 151/182 (82%)

Query:    22 NQNAPPKSTN--KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLH 79
             N N  P S+N  K+KR+LPG PDPDAEVIALSP +L+ TNRF+CE+CNKGF+RDQNLQLH
Sbjct:    27 NPNPNPTSSNSAKRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLH 86

Query:    80 RRGHNLPWKLRQRSNKE-VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXX 138
             RRGHNLPWKL+QR+NKE VKK+VY+CPEK+CVHHDP RALGDLTGIKKHF RKHGE    
Sbjct:    87 RRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWK 146

Query:   139 XXXXXXXYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSE 198
                    YAV SD+KAHSK+CGTKEY+C+CG +FSR+DSFITHRAFCD L +ESA+  S 
Sbjct:   147 CDKCSKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESARFVSV 206

Query:   199 EP 200
              P
Sbjct:   207 PP 208

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2205672 IDD7 "AT1G55110" [Arabidopsis thaliana (taxid:3702)]

 Score = 716 (257.1 bits), Expect = 1.5e-77, Sum P(2) = 1.5e-77
 Identities = 131/201 (65%), Positives = 158/201 (78%)

Query:    27 PKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLP 86
             P+S+ K+KR+ PG PDP+AEV+ALSPKTL+ATNRF+CE+CNKGFQRDQNLQLH+RGHNLP
Sbjct:    58 PQSSLKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLP 117

Query:    87 WKLRQRSNKEV-KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXX 145
             WKL+QRSNK+V +K+VYVCPE  CVHH P+RALGDLTGIKKHF RKHGE           
Sbjct:   118 WKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKK 177

Query:   146 YAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEG 205
             YAVQSD+KAH+K CGTKEYKC+CG +FSRRDSFITHRAFCD L +ESA+     P +I+ 
Sbjct:   178 YAVQSDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARAMPN-PIMIQA 236

Query:   206 MVKPNTESDPKVQPVDSSTST 226
                P+       Q +  S+S+
Sbjct:   237 SNSPHHHHHQTQQNIGFSSSS 257

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2167608 NUC "AT5G44160" [Arabidopsis thaliana (taxid:3702)]

 Score = 717 (257.5 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
 Identities = 125/166 (75%), Positives = 145/166 (87%)

Query:    32 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
             KKKR+LPG PDP+AEVIALSP TL+ATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct:    37 KKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQ 96

Query:    92 RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQSD 151
             R++KEV+KRVYVCPEK+CVHH  +RALGDLTGIKKHFCRKHGE           YAVQSD
Sbjct:    97 RTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQSD 156

Query:   152 YKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQS 197
             +KAHSK CGT+EY+C+CG +FSRRDSFITHRAFCD L +E+AK+ +
Sbjct:   157 WKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINA 202

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0010260 "organ senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0048510 "regulation of timing of transition from vegetative to reproductive phase" evidence=IMP

GO:0048573 "photoperiodism, flowering" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2051688 IDD4 "indeterminate(ID)-domain 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 703 (252.5 bits), Expect = 5.9e-76, Sum P(2) = 5.9e-76
 Identities = 122/173 (70%), Positives = 148/173 (85%)

Query:    22 NQNAPPKSTNKKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRR 81
             N +APP    KK+R+ PG P+PDAEV+ALSPKTL+ATNRF+C++CNKGFQR+QNLQLHRR
Sbjct:    47 NSSAPPP---KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRR 103

Query:    82 GHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXX 141
             GHNLPWKL+Q+S KEVK++VY+CPE +CVHHDP+RALGDLTGIKKH+ RKHGE       
Sbjct:   104 GHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEK 163

Query:   142 XXXXYAVQSDYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAK 194
                 YAVQSD+KAHSK CGTKEY+C+CG +FSRRDS+ITHRAFCD L +E+A+
Sbjct:   164 CSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQETAR 216

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2132397 IDD12 "AT4G02670" [Arabidopsis thaliana (taxid:3702)]

 Score = 707 (253.9 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
 Identities = 127/180 (70%), Positives = 148/180 (82%)

Query:    32 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
             KKKR LPG PDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct:    53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112

Query:    92 RSNKEV-KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEXXXXXXXXXXXYAVQS 150
             ++ KE  KK+VYVCPE +C HH P+RALGDLTGIKKHFCRKHGE           YAVQS
Sbjct:   113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172

Query:   151 DYKAHSKVCGTKEYKCNCGAVFSRRDSFITHRAFCDMLTKESAKVQSEEPNLIEGMVKPN 210
             D+KAH+K+CGT++Y+C+CG +FSR+D+FITHRAFCD L +ESA++ S   +    +  PN
Sbjct:   173 DWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHSTSSS---NLTNPN 229

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	512
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.88
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.82
KOG3576	267	consensus Ovo and related transcription factors [T	99.74
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.49
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.49
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.48
KOG3608	467	consensus Zn finger proteins [General function pre	99.47
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.44
KOG3608	467	consensus Zn finger proteins [General function pre	99.35
KOG3576	267	consensus Ovo and related transcription factors [T	99.35
PLN03086	567	PRLI-interacting factor K; Provisional	99.26
PHA00733	128	hypothetical protein	98.99
PHA00733	128	hypothetical protein	98.98
KOG3993	500	consensus Transcription factor (contains Zn finger	98.66
PLN03086	567	PRLI-interacting factor K; Provisional	98.66
PHA02768	55	hypothetical protein; Provisional	98.49
KOG3993	500	consensus Transcription factor (contains Zn finger	98.42
PHA02768	55	hypothetical protein; Provisional	98.42
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.38
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.96
PHA00732	79	hypothetical protein	97.88
PHA00616	44	hypothetical protein	97.79
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.77
PHA00616	44	hypothetical protein	97.76
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.76
PHA00732	79	hypothetical protein	97.69
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.67
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.61
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.36
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.35
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	97.3
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.12
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.1
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.87
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	96.72
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.5
smart00355	26	ZnF_C2H2 zinc finger.	96.41
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.28
KOG1146	1406	consensus Homeobox protein [General function predi	96.27
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.17
COG5048	467	FOG: Zn-finger [General function prediction only]	96.08
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.93
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.86
PRK04860	160	hypothetical protein; Provisional	95.75
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	95.62
COG5048	467	FOG: Zn-finger [General function prediction only]	95.57
KOG1146	1406	consensus Homeobox protein [General function predi	95.38
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.76
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.54
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	94.39
PRK04860	160	hypothetical protein; Provisional	93.94
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	93.93
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	93.66
smart00355	26	ZnF_C2H2 zinc finger.	93.63
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.24
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	92.73
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	91.85
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	91.57
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.88
KOG4377	480	consensus Zn-finger protein [General function pred	90.77
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.08
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	90.06
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.55
KOG4173	253	consensus Alpha-SNAP protein [Intracellular traffi	88.53
KOG2785	390	consensus C2H2-type Zn-finger protein [General fun	87.03
KOG2071	579	consensus mRNA cleavage and polyadenylation factor	86.96
KOG2893	341	consensus Zn finger protein [General function pred	86.27
KOG2893	341	consensus Zn finger protein [General function pred	86.23
KOG2186	276	consensus Cell growth-regulating nucleolar protein	85.27
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	84.87
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	84.47

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.88  E-value=4.3e-23  Score=199.96  Aligned_cols=133  Identities=23%  Similarity=0.403  Sum_probs=110.3

Q ss_pred             CCCCCCCCCCCCCchhhhhcCccccC---CCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           31 NKKKRSLPGTPDPDAEVIALSPKTLL---ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        31 ~kkk~~~~~~~~~~~~~~~~~~~~~~---~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      .+-++.++++.-.....+..|++.|.   +.+-|.|++|+|.|.....|+.|+|+|+               -+++|.+|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~---------------l~c~C~iC  193 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT---------------LPCECGIC  193 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC---------------CCcccccc
Confidence            33445555565555566666666665   4667888888888888888888888886               46778887


Q ss_pred             CCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHh
Q 010389          108 SCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFC  185 (512)
Q Consensus       108 ~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~h  185 (512)
                             ||.|.+..-|+.|+|+|+|||||.|..|+|.|+.+++|+.||++ .+.|+|+|. |+|.|.++..|.+|....
T Consensus       194 -------GKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  194 -------GKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             -------cccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence                   99999999999999999999999999999999999999999999 567999999 999999999999997553

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.82  E-value=8.2e-21  Score=184.16  Aligned_cols=126  Identities=20%  Similarity=0.428  Sum_probs=114.3

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      .....+|+|..|+|.|.+..+|-+|..+|.          ....++.+.|++|       +|.|.....|+.|+++|+  
T Consensus       125 ~~~~~r~~c~eCgk~ysT~snLsrHkQ~H~----------~~~s~ka~~C~~C-------~K~YvSmpALkMHirTH~--  185 (279)
T KOG2462|consen  125 AAKHPRYKCPECGKSYSTSSNLSRHKQTHR----------SLDSKKAFSCKYC-------GKVYVSMPALKMHIRTHT--  185 (279)
T ss_pred             cccCCceeccccccccccccccchhhcccc----------cccccccccCCCC-------CceeeehHHHhhHhhccC--
Confidence            335568999999999999999999999996          2234788999999       999999999999999997  


Q ss_pred             ccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcCcchhhhhhhcCC
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDMLTKESAKVQSEE  199 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~~~~~~~~~~~  199 (512)
                      -+++|.+|||.|.+.+.|+.|+|+ +|||||.|. |+|.|..+.+|+.|+++|-...+.........
T Consensus       186 l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~Ks  252 (279)
T KOG2462|consen  186 LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKS  252 (279)
T ss_pred             CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhH
Confidence            789999999999999999999999 899999999 99999999999999999998888877666554

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.74  E-value=9.3e-19  Score=162.07  Aligned_cols=119  Identities=24%  Similarity=0.499  Sum_probs=109.0

Q ss_pred             CCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           56 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        56 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .+...|.|.+|+|.|..+.-|.+|++.|.             ..+.|.|..|       +|.|.+...|++|+|+|+|.|
T Consensus       113 sd~d~ftCrvCgK~F~lQRmlnrh~kch~-------------~vkr~lct~c-------gkgfndtfdlkrh~rthtgvr  172 (267)
T KOG3576|consen  113 SDQDSFTCRVCGKKFGLQRMLNRHLKCHS-------------DVKRHLCTFC-------GKGFNDTFDLKRHTRTHTGVR  172 (267)
T ss_pred             CCCCeeeeehhhhhhhHHHHHHHHhhhcc-------------HHHHHHHhhc-------cCcccchhhhhhhhccccCcc
Confidence            35668999999999999999999999998             8899999999       999999999999999999999


Q ss_pred             cccccCCCCcccChHHHhhhhhh-cC-----------Ccceecc-CCCccCChhHHHHHHHHhcCcchhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV-CG-----------TKEYKCN-CGAVFSRRDSFITHRAFCDMLTKESAK  194 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~-h~-----------~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~~~~~~  194 (512)
                      ||+|..|+|.|..+..|..|++. |+           +|.|.|+ ||.+-.+...+..|++.||.......+
T Consensus       173 pykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~SpallK  244 (267)
T KOG3576|consen  173 PYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPALLK  244 (267)
T ss_pred             ccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCCCHHHHH
Confidence            99999999999999999999988 85           4779999 999999999999999999985544433

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.49  E-value=1.5e-14  Score=157.13  Aligned_cols=49  Identities=22%  Similarity=0.623  Sum_probs=34.0

Q ss_pred             cccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhc
Q 010389          138 KCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       138 ~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      +|-+|-|....+..|+.|.|+ +|||||+|. |++.|.++.+|+.|+-.|.
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHk  657 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHK  657 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccc
Confidence            477777777777777777777 566777777 7777777777777765554

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.49  E-value=1.1e-14  Score=158.29  Aligned_cols=51  Identities=22%  Similarity=0.559  Sum_probs=48.2

Q ss_pred             ccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcC
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      +.|.+|+|.|.....|..|+|+ .++|+|.|. |++.|..+.+|+.||.+|+-
T Consensus       880 h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  880 HVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccc
Confidence            5699999999999999999999 789999999 99999999999999998874

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.48  E-value=6.5e-15  Score=157.34  Aligned_cols=107  Identities=23%  Similarity=0.547  Sum_probs=95.9

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccC------
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG------  133 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g------  133 (512)
                      ...|++|.+.|++...|+.|++..+           +..+..|.|..|       ...|.++..|.+||.+|.-      
T Consensus       210 lltcpycdrgykrltslkeHikyrh-----------ekne~nfsC~lC-------sytFAyRtQLErhm~~hkpg~dqa~  271 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRH-----------EKNEPNFSCMLC-------SYTFAYRTQLERHMQLHKPGGDQAI  271 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHH-----------hhCCCCCcchhh-------hhhhhhHHHHHHHHHhhcCCCcccc
Confidence            3689999999999999999998654           225567889999       9999999999999999842      


Q ss_pred             -------CccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHH
Q 010389          134 -------EKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAF  184 (512)
Q Consensus       134 -------ekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~  184 (512)
                             .|.|+|..|+|.|+.+.+|+.|+|+ .|||||.|. |.|+|.....+..|+..
T Consensus       272 sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  272 SLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence                   4789999999999999999999999 699999999 99999999999999743

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.47  E-value=2.4e-14  Score=142.46  Aligned_cols=131  Identities=21%  Similarity=0.328  Sum_probs=78.6

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhh--------------cccccccCCcceeCCCCCCCCCCCCCccCC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLR--------------QRSNKEVKKRVYVCPEKSCVHHDPTRALGD  120 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~--------------~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~  120 (512)
                      ...+++|.|.+|.|.|.++..|+.|++.|..-++|-              .-+-.+...|+|+|+.|       .+.|.+
T Consensus       232 ~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C-------d~~c~~  304 (467)
T KOG3608|consen  232 ELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC-------DTRCVR  304 (467)
T ss_pred             hhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCccccch-------hhhhcc
Confidence            334455666666666666666666666665333321              11123344566666666       666666


Q ss_pred             hhhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhh-c---CCcceecc-CCCccCChhHHHHHHHHhcCcchhhh
Q 010389          121 LTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKV-C---GTKEYKCN-CGAVFSRRDSFITHRAFCDMLTKESA  193 (512)
Q Consensus       121 ~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~-h---~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~~~~~  193 (512)
                      ...|.+|...|. +-.|.|..  |...|....++++|++. |   .+-+|.|. |++.|.+-.+|.+|+++.|.......
T Consensus       305 esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~PsG  383 (467)
T KOG3608|consen  305 ESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHGFRLPSG  383 (467)
T ss_pred             HHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhcccCCCC
Confidence            666666666655 45566666  66666666666666666 3   23457777 77777777777777766666554443

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.44  E-value=2.9e-14  Score=152.47  Aligned_cols=81  Identities=28%  Similarity=0.626  Sum_probs=71.4

Q ss_pred             CCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcc
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKK  136 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp  136 (512)
                      +...|.|++|+|.|.....|.||.-.|.             +++||+|.+|       .|.|+.+..|..|+|.|.||||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHs-------------GqRPyqC~iC-------kKAFKHKHHLtEHkRLHSGEKP  950 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHS-------------GQRPYQCIIC-------KKAFKHKHHLTEHKRLHSGEKP  950 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhc-------------CCCCcccchh-------hHhhhhhhhhhhhhhhccCCCc
Confidence            4567999999999999999999998887             8899999998       8999999999999999999999


Q ss_pred             ccccCCCCcccChHHHhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~  157 (512)
                      |+|+.|+|+|.....+-.||.
T Consensus       951 fQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  951 FQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             chhhhhhhhcccccchHhhhc
Confidence            999999999988888888875

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.35  E-value=2.2e-13  Score=135.62  Aligned_cols=141  Identities=18%  Similarity=0.288  Sum_probs=115.4

Q ss_pred             CCCCchhhhhcCccccCCCCCeeccccCcccCChHHHHHHHHhcC----CCchhhccccc-----------ccCCcceeC
Q 010389           40 TPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN----LPWKLRQRSNK-----------EVKKRVYVC  104 (512)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~----~p~~~~~~~~~-----------~~~~k~~~C  104 (512)
                      ....+...++.|.+.|..+|...|+.|+.-|.++..|-.|+|.-+    .++.|+...+.           ......|+|
T Consensus       187 ~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykC  266 (467)
T KOG3608|consen  187 KHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKC  266 (467)
T ss_pred             hhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccc
Confidence            334445567788899999999999999999999999999988765    34554433221           123356889


Q ss_pred             CCCCCCCCCCCCccCChhhHHhhhhh-ccCCccccccCCCCcccChHHHhhhhhhcCCcceecc---CCCccCChhHHHH
Q 010389          105 PEKSCVHHDPTRALGDLTGIKKHFCR-KHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN---CGAVFSRRDSFIT  180 (512)
Q Consensus       105 ~~C~C~~~~~~k~F~~~~~Lk~H~~~-H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~---Cgk~F~~~~~L~~  180 (512)
                      +.|       .......+.|.+||+. |..+|||+|+.|++.|.+...|.+|..+|.+-.|+|+   |...|++...+++
T Consensus       267 plC-------dmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~  339 (467)
T KOG3608|consen  267 PLC-------DMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRR  339 (467)
T ss_pred             ccc-------ccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHH
Confidence            988       8888889999999884 6678999999999999999999999999888889997   9999999999999


Q ss_pred             HHHHhcC
Q 010389          181 HRAFCDM  187 (512)
Q Consensus       181 H~~~hh~  187 (512)
                      |++.+|.
T Consensus       340 H~~evhE  346 (467)
T KOG3608|consen  340 HFLEVHE  346 (467)
T ss_pred             HHHHhcc
Confidence            9988884

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.35  E-value=2e-13  Score=126.82  Aligned_cols=89  Identities=22%  Similarity=0.451  Sum_probs=83.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCCh
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRR  175 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~  175 (512)
                      ....|.|.+|       +|.|.-..-|.+||+-|...|.|.|..|||.|...-+|++|+|+ ++.|||+|. |+|.|..+
T Consensus       114 d~d~ftCrvC-------gK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqr  186 (267)
T KOG3576|consen  114 DQDSFTCRVC-------GKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQR  186 (267)
T ss_pred             CCCeeeeehh-------hhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhh
Confidence            4678999999       99999999999999999999999999999999999999999999 789999999 99999999


Q ss_pred             hHHHHHHHHhcCcchhhh
Q 010389          176 DSFITHRAFCDMLTKESA  193 (512)
Q Consensus       176 ~~L~~H~~~hh~~~~~~~  193 (512)
                      -.|..|.++.|.......
T Consensus       187 csleshl~kvhgv~~~ya  204 (267)
T KOG3576|consen  187 CSLESHLKKVHGVQHQYA  204 (267)
T ss_pred             ccHHHHHHHHcCchHHHH
Confidence            999999999888655544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.26  E-value=9.8e-12  Score=134.28  Aligned_cols=104  Identities=19%  Similarity=0.437  Sum_probs=90.2

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      ++.+.|++|++.|. ...|+.|+++||               ++|.|+ |       ++.+ .+..|..|+.+|..+|++
T Consensus       451 ~~H~~C~~Cgk~f~-~s~LekH~~~~H---------------kpv~Cp-C-------g~~~-~R~~L~~H~~thCp~Kpi  505 (567)
T PLN03086        451 KNHVHCEKCGQAFQ-QGEMEKHMKVFH---------------EPLQCP-C-------GVVL-EKEQMVQHQASTCPLRLI  505 (567)
T ss_pred             ccCccCCCCCCccc-hHHHHHHHHhcC---------------CCccCC-C-------CCCc-chhHHHhhhhccCCCCce
Confidence            45679999999996 688999999885               679998 8       8655 679999999999999999


Q ss_pred             cccCCCCccc----------ChHHHhhhhhhcCCcceecc-CCCccCChhHHHHHHHHhcC
Q 010389          138 KCDKCSKKYA----------VQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       138 ~C~~C~k~F~----------~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      .|.+|++.|.          ....|..|+..++.+++.|. |++.|..++ |..|+..+|.
T Consensus       506 ~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlrd-m~~H~~~~h~  565 (567)
T PLN03086        506 TCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLKE-MDIHQIAVHQ  565 (567)
T ss_pred             eCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeehh-HHHHHHHhhc
Confidence            9999999995          24589999999999999999 999998775 8899888775

>PHA00733 hypothetical protein

Probab=98.99  E-value=3.6e-10  Score=100.88  Aligned_cols=84  Identities=13%  Similarity=0.262  Sum_probs=69.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhh--h---hhccCCccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKH--F---CRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAV  171 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H--~---~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~  171 (512)
                      ..+++.|.+|       .+.|.+...|..|  +   ..++++++|.|..|++.|.....|+.|++.+ +.+|.|. |++.
T Consensus        37 ~~~~~~~~~~-------~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~  108 (128)
T PHA00733         37 EQKRLIRAVV-------KTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKE  108 (128)
T ss_pred             hhhhHHHHHH-------hhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCc
Confidence            5688999998       7777766555554  1   1334589999999999999999999999976 5679999 9999


Q ss_pred             cCChhHHHHHHHHhcCcc
Q 010389          172 FSRRDSFITHRAFCDMLT  189 (512)
Q Consensus       172 F~~~~~L~~H~~~hh~~~  189 (512)
                      |.+...|.+|+...|.+.
T Consensus       109 F~~~~sL~~H~~~~h~~~  126 (128)
T PHA00733        109 FRNTDSTLDHVCKKHNIC  126 (128)
T ss_pred             cCCHHHHHHHHHHhcCcc
Confidence            999999999999988764

>PHA00733 hypothetical protein

Probab=98.98  E-value=4e-10  Score=100.59  Aligned_cols=96  Identities=16%  Similarity=0.155  Sum_probs=78.0

Q ss_pred             hhhhcCccccCCCCCeeccccCcccCChHHHHHH--HHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhh
Q 010389           46 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLH--RRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTG  123 (512)
Q Consensus        46 ~~~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H--~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~  123 (512)
                      +.+........+++++.|.+|.+.|.....|..|  ++.|.          .....++|+|+.|       ++.|.+...
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~----------~~~~~kPy~C~~C-------gk~Fss~s~   88 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLL----------TSKAVSPYVCPLC-------LMPFSSSVS   88 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhc----------ccCCCCCccCCCC-------CCcCCCHHH
Confidence            4444444445568899999999999998888877  33332          1125789999999       999999999


Q ss_pred             HHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cC
Q 010389          124 IKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CG  160 (512)
Q Consensus       124 Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~  160 (512)
                      |..|++.|  +++|.|.+|++.|.....|++|+.. |+
T Consensus        89 L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         89 LKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            99999987  4679999999999999999999988 64

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.66  E-value=5.7e-09  Score=106.79  Aligned_cols=136  Identities=17%  Similarity=0.241  Sum_probs=98.8

Q ss_pred             hcCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhh--------------------cccccccCCcceeCCCCC
Q 010389           49 ALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLR--------------------QRSNKEVKKRVYVCPEKS  108 (512)
Q Consensus        49 ~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~--------------------~~~~~~~~~k~~~C~~C~  108 (512)
                      +-|+=.....-.|+|+.|+|+|....||--|+|+|.-.....                    .+.........|.|.+| 
T Consensus       284 AQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C-  362 (500)
T KOG3993|consen  284 AQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTC-  362 (500)
T ss_pred             hhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHh-
Confidence            333333334456999999999999999999999997211111                    11222234458999999 


Q ss_pred             CCCCCCCCccCChhhHHhhhhhccCC---c-------------------------------------------cccccCC
Q 010389          109 CVHHDPTRALGDLTGIKKHFCRKHGE---K-------------------------------------------KWKCDKC  142 (512)
Q Consensus       109 C~~~~~~k~F~~~~~Lk~H~~~H~ge---k-------------------------------------------p~~C~~C  142 (512)
                            +|.|.++..|++|..+|+..   |                                           -..|.+|
T Consensus       363 ------~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~~  436 (500)
T KOG3993|consen  363 ------GKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPYD  436 (500)
T ss_pred             ------hhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCCC
Confidence                  99999999999998888531   0                                           0236667


Q ss_pred             CCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcCcchh
Q 010389          143 SKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDMLTKE  191 (512)
Q Consensus       143 ~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~~~  191 (512)
                      +-.+..+..--.|.+. +.+..|.|. |..+|.....|.+|+.++|.-+..
T Consensus       437 ~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hpse~r  487 (500)
T KOG3993|consen  437 GSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHPSELR  487 (500)
T ss_pred             CCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcChHHhh
Confidence            7666666666666666 667789999 999999999999999999964433

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.66  E-value=6.1e-08  Score=105.22  Aligned_cols=115  Identities=18%  Similarity=0.356  Sum_probs=87.3

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC-----CC-chhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN-----LP-WKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~-----~p-~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      ..-.|..|.+... ..+|..|.....     +| ..|...-.....++.+.|++|       ++.|. ...|++|+++||
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~r~el~~H~~C~~C-------gk~f~-~s~LekH~~~~H  476 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLRVEEAKNHVHCEKC-------GQAFQ-QGEMEKHMKVFH  476 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceeeccccccCccCCCC-------CCccc-hHHHHHHHHhcC
Confidence            3457999998765 456888975442     11 123333344455677899998       89885 688999999986


Q ss_pred             CCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC----------hhHHHHHHHHhc
Q 010389          133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR----------RDSFITHRAFCD  186 (512)
Q Consensus       133 gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~----------~~~L~~H~~~hh  186 (512)
                        ++|.|. |++.+ .+..|..|+++ +.++++.|. |++.|..          ...|..|...+.
T Consensus       477 --kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG  538 (567)
T PLN03086        477 --EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICG  538 (567)
T ss_pred             --CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcC
Confidence              899999 99865 67899999988 789999999 9999952          347889988764

>PHA02768 hypothetical protein; Provisional

Probab=98.49  E-value=5.2e-08  Score=73.16  Aligned_cols=44  Identities=16%  Similarity=0.296  Sum_probs=34.4

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHh
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYK  153 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~  153 (512)
                      -|.|++|       ++.|....+|.+||++|+  ++|+|..|+|.|.+...|.
T Consensus         5 ~y~C~~C-------GK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPIC-------GEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchh-------CCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            3678887       888888888888888887  6788888888887666554

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.42  E-value=5.2e-08  Score=99.88  Aligned_cols=87  Identities=17%  Similarity=0.442  Sum_probs=73.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcC-------------------
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCG-------------------  160 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~-------------------  160 (512)
                      .-|.|..|       ...|.+...|.+|..--...-.|+|..|+|.|....+|..|.|+|.                   
T Consensus       266 GdyiCqLC-------K~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~  338 (500)
T KOG3993|consen  266 GDYICQLC-------KEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVET  338 (500)
T ss_pred             HHHHHHHH-------HHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhh
Confidence            46899999       8999999999999875544456999999999999999999999972                   


Q ss_pred             ---------------Ccceecc-CCCccCChhHHHHHHHHhcCcchhhh
Q 010389          161 ---------------TKEYKCN-CGAVFSRRDSFITHRAFCDMLTKESA  193 (512)
Q Consensus       161 ---------------~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~~~~~  193 (512)
                                     +..|.|. |+|.|.+...|+.|+..||.......
T Consensus       339 rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~  387 (500)
T KOG3993|consen  339 RAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKE  387 (500)
T ss_pred             hhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchh
Confidence                           1248999 99999999999999999987555443

>PHA02768 hypothetical protein; Provisional

Probab=98.42  E-value=1.2e-07  Score=71.29  Aligned_cols=44  Identities=18%  Similarity=0.264  Sum_probs=39.2

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHH
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIK  125 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk  125 (512)
                      .|+|+.|||.|.+..+|.+|+++|+               ++|+|..|       ++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~---------------k~~kc~~C-------~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN---------------TNLKLSNC-------KRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC---------------CcccCCcc-------cceecccceeE
Confidence            5899999999999999999999995               58899999       99998777654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.38  E-value=1.2e-07  Score=60.69  Aligned_cols=26  Identities=31%  Similarity=0.796  Sum_probs=23.8

Q ss_pred             hHHhhhhhccCCccccccCCCCcccC
Q 010389          123 GIKKHFCRKHGEKKWKCDKCSKKYAV  148 (512)
Q Consensus       123 ~Lk~H~~~H~gekp~~C~~C~k~F~~  148 (512)
                      +|++||++|+++|||.|.+|++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            58999999999999999999999863

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.96  E-value=2.7e-06  Score=84.51  Aligned_cols=56  Identities=29%  Similarity=0.688  Sum_probs=40.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc-------------------CCccccccCCCCcccChHHHhhhhhh
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-------------------GEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~-------------------gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      .+|||+|++-+|     .|.|++...|+.||..-|                   ..|||+|.+|+|+|+....|+.|+..
T Consensus       346 d~KpykCpV~gC-----~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~H  420 (423)
T COG5189         346 DGKPYKCPVEGC-----NKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKH  420 (423)
T ss_pred             cCceecCCCCCc-----hhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecccc
Confidence            458999998877     899999999999987533                   13666676677666666666666543

>PHA00732 hypothetical protein

Probab=97.88  E-value=9.7e-06  Score=66.24  Aligned_cols=23  Identities=30%  Similarity=0.411  Sum_probs=16.2

Q ss_pred             CeeccccCcccCChHHHHHHHHh
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRG   82 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~   82 (512)
                      +|.|.+|++.|.+..+|+.|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc
Confidence            46677777777777777777764

>PHA00616 hypothetical protein

Probab=97.79  E-value=9.1e-06  Score=58.29  Aligned_cols=34  Identities=15%  Similarity=0.252  Sum_probs=30.7

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      +|+|..||+.|..+.+|.+|++.|+             +++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~h-------------g~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVH-------------KQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhc-------------CCCccceeE
Confidence            6899999999999999999999999             778887754

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.77  E-value=2.4e-05  Score=77.99  Aligned_cols=67  Identities=22%  Similarity=0.417  Sum_probs=50.0

Q ss_pred             CCCCeeccc--cCcccCChHHHHHHHHhcCCCchhh-----ccc-ccccCCcceeCCCCCCCCCCCCCccCChhhHHhhh
Q 010389           57 ATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLR-----QRS-NKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHF  128 (512)
Q Consensus        57 ~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~-----~~~-~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~  128 (512)
                      ++|+|+|++  |+|.|+.+.-|+.|+..-|...++-     ... .-....|||+|++|       +|+|++...|+.|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC-------~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVC-------DKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceecccc-------chhhccCccceecc
Confidence            359999998  9999999999999986433111110     001 11346799999999       99999999999997


Q ss_pred             hh
Q 010389          129 CR  130 (512)
Q Consensus       129 ~~  130 (512)
                      ..
T Consensus       419 ~H  420 (423)
T COG5189         419 KH  420 (423)
T ss_pred             cc
Confidence            64

>PHA00616 hypothetical protein

Probab=97.76  E-value=7.9e-06  Score=58.61  Aligned_cols=35  Identities=14%  Similarity=0.246  Sum_probs=29.3

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      +|+|+.|       ++.|..+..|.+|++.||++++|.|++-
T Consensus         1 pYqC~~C-------G~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRC-------GGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCccchh-------hHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            5788888       8888888888888888888888888753

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.76  E-value=3e-05  Score=58.68  Aligned_cols=52  Identities=23%  Similarity=0.505  Sum_probs=35.2

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      .|.|++|++. .+...|..|....|.           ...+.++||+|       ...+.  .+|.+||+.+|
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~-----------~~~~~v~CPiC-------~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHR-----------SESKNVVCPIC-------SSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCc-----------CCCCCccCCCc-------hhhhh--hHHHHHHHHhc
Confidence            4888889884 556788888766551           13456888888       55433  37777777665

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=97.69  E-value=2.7e-05  Score=63.61  Aligned_cols=45  Identities=27%  Similarity=0.420  Sum_probs=37.9

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhh-ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCR-KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~-H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +|.|++|       ++.|.+...|++|++. |.   ++.|.+|++.|.   .|..|.+.
T Consensus         1 py~C~~C-------gk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPIC-------GFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCC-------CCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhcc
Confidence            5788888       9999999999999985 54   368999999997   57888876

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.67  E-value=2.8e-05  Score=47.98  Aligned_cols=23  Identities=43%  Similarity=0.908  Sum_probs=21.8

Q ss_pred             eeccccCcccCChHHHHHHHHhc
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      |+|++|++.|.++.+|++|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999975

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.61  E-value=3.4e-05  Score=49.32  Aligned_cols=26  Identities=31%  Similarity=0.635  Sum_probs=23.3

Q ss_pred             HHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCC
Q 010389           75 NLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD  120 (512)
Q Consensus        75 ~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~  120 (512)
                      +|++|+++|+             ++++|.|++|       ++.|.+
T Consensus         1 ~l~~H~~~H~-------------~~k~~~C~~C-------~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHT-------------GEKPYKCPYC-------GKSFSN   26 (26)
T ss_dssp             HHHHHHHHHS-------------SSSSEEESSS-------SEEESS
T ss_pred             CHHHHhhhcC-------------CCCCCCCCCC-------cCeeCc
Confidence            5899999998             9999999999       888853

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.36  E-value=0.00014  Score=44.71  Aligned_cols=24  Identities=42%  Similarity=0.901  Sum_probs=20.7

Q ss_pred             eeccccCcccCChHHHHHHHHhcC
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |.|++|++.|.++..|+.|++.|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999875

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.35  E-value=0.00019  Score=54.30  Aligned_cols=47  Identities=19%  Similarity=0.349  Sum_probs=25.9

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHHhhhhhccC--CccccccCCCCcccChHHHhhhhhh
Q 010389          102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG--EKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       102 ~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g--ekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |.||+|       ++ ..+...|..|....|.  .+.+.|++|...+.  .+|.+|++.
T Consensus         3 f~CP~C-------~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~   51 (54)
T PF05605_consen    3 FTCPYC-------GK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNS   51 (54)
T ss_pred             cCCCCC-------CC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHH
Confidence            566666       66 4455666666554332  23466666665433  255555554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=97.30  E-value=0.00023  Score=78.67  Aligned_cols=46  Identities=20%  Similarity=0.362  Sum_probs=27.9

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCC------CcccChHHHhhhhhhcCCcceecc
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCS------KKYAVQSDYKAHSKVCGTKEYKCN  167 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~------k~F~~~~~L~~H~~~h~~kpy~C~  167 (512)
                      ...|.+...|.+|++.+|    |.|.+|.      .-|.....|+.|.|.   ..|.|+
T Consensus       189 ~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~---~HflCE  240 (669)
T KOG2231|consen  189 HERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK---GHFLCE  240 (669)
T ss_pred             hhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh---cCcccc
Confidence            677777777777776654    5566663      234455666666665   125665

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.12  E-value=0.00025  Score=59.51  Aligned_cols=23  Identities=22%  Similarity=0.569  Sum_probs=0.0

Q ss_pred             eccccCcccCChHHHHHHHHhcC
Q 010389           62 VCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        62 ~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|..|+..|.....|..|+...|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H   23 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKH   23 (100)
T ss_dssp             -----------------------
T ss_pred             Ccccccccccccccccccccccc
Confidence            47788888888888888876554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.10  E-value=0.00033  Score=44.86  Aligned_cols=25  Identities=36%  Similarity=0.711  Sum_probs=23.6

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|+|.+|++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5899999999999999999999885

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.87  E-value=0.00077  Score=56.49  Aligned_cols=74  Identities=15%  Similarity=0.226  Sum_probs=22.0

Q ss_pred             eCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCChhHHHHH
Q 010389          103 VCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITH  181 (512)
Q Consensus       103 ~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H  181 (512)
                      +|.+|       +..|.+...|..||...|+...-    ....+.....+..+.+..-...+.|. |++.|.....|..|
T Consensus         1 ~C~~C-------~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~H   69 (100)
T PF12756_consen    1 QCLFC-------DESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEH   69 (100)
T ss_dssp             -----------------------------------------------------------SSEEBSSSS-EESSHHHHHHH
T ss_pred             Ccccc-------ccccccccccccccccccccccc----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHH
Confidence            36667       99999999999999877753211    11222234444445444333479999 99999999999999


Q ss_pred             HHHhcC
Q 010389          182 RAFCDM  187 (512)
Q Consensus       182 ~~~hh~  187 (512)
                      ++.++.
T Consensus        70 m~~~~H   75 (100)
T PF12756_consen   70 MRSKHH   75 (100)
T ss_dssp             HHHTTT
T ss_pred             HcCccC
Confidence            987643

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.72  E-value=0.00076  Score=41.43  Aligned_cols=16  Identities=19%  Similarity=0.505  Sum_probs=9.8

Q ss_pred             CCccCChhhHHhhhhh
Q 010389          115 TRALGDLTGIKKHFCR  130 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~  130 (512)
                      ++.|.++..|++||+.
T Consensus         7 ~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    7 GKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             TEEESSHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHhH
Confidence            6666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.50  E-value=0.0023  Score=39.09  Aligned_cols=23  Identities=22%  Similarity=0.639  Sum_probs=11.0

Q ss_pred             eecc-CCCccCChhHHHHHHHHhc
Q 010389          164 YKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       164 y~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      |.|+ |++.|.+...|+.|++.||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            4455 5555555555555555443

...

>smart00355 ZnF_C2H2 zinc finger

Probab=96.41  E-value=0.0021  Score=39.82  Aligned_cols=24  Identities=33%  Similarity=0.670  Sum_probs=22.3

Q ss_pred             eeccccCcccCChHHHHHHHHhcC
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999874

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.28  E-value=0.013  Score=59.40  Aligned_cols=114  Identities=21%  Similarity=0.339  Sum_probs=70.5

Q ss_pred             Ceeccc--cCcccCChHHHHHHHHhcCCCchhh----------------------ccccc---ccC-CcceeCCCCCCCC
Q 010389           60 RFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLR----------------------QRSNK---EVK-KRVYVCPEKSCVH  111 (512)
Q Consensus        60 ~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~----------------------~~~~~---~~~-~k~~~C~~C~C~~  111 (512)
                      .|.|+.  |..+......|+.|.+..|..+-|.                      .+...   +.+ +.--.|.+|    
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC----  226 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFC----  226 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhc----
Confidence            378876  7766666778999987655221111                      00000   001 112357777    


Q ss_pred             CCCCCccCChhhHHhhhhhccCCccccccCCCC-------cccChHHHhhhhhhcCCcceecc---CC----CccCChhH
Q 010389          112 HDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSK-------KYAVQSDYKAHSKVCGTKEYKCN---CG----AVFSRRDS  177 (512)
Q Consensus       112 ~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k-------~F~~~~~L~~H~~~h~~kpy~C~---Cg----k~F~~~~~  177 (512)
                         ...|.+-..|.+|+|..| |   +|.+|++       -|+.-..|.+|.+.   ..|.|.   |-    ..|.....
T Consensus       227 ---~~~FYdDDEL~~HcR~~H-E---~ChICD~v~p~~~QYFK~Y~~Le~HF~~---~hy~ct~qtc~~~k~~vf~~~~e  296 (493)
T COG5236         227 ---KIYFYDDDELRRHCRLRH-E---ACHICDMVGPIRYQYFKSYEDLEAHFRN---AHYCCTFQTCRVGKCYVFPYHTE  296 (493)
T ss_pred             ---cceecChHHHHHHHHhhh-h---hhhhhhccCccchhhhhCHHHHHHHhhc---CceEEEEEEEecCcEEEeccHHH
Confidence               888888888888888655 3   4555554       36667777788765   227775   52    46788888


Q ss_pred             HHHHHHHhcC
Q 010389          178 FITHRAFCDM  187 (512)
Q Consensus       178 L~~H~~~hh~  187 (512)
                      |..|+...|.
T Consensus       297 l~~h~~~~h~  306 (493)
T COG5236         297 LLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHhh
Confidence            8889766554

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=96.27  E-value=0.0025  Score=74.45  Aligned_cols=121  Identities=13%  Similarity=0.217  Sum_probs=85.6

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcCCCch---hhc---------ccccccCCcceeCCCCCCCCCCCCCccCChhhHH
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWK---LRQ---------RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIK  125 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~---~~~---------~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk  125 (512)
                      .|.|+|+.|+..|+....|..|||..|-...   |..         ........++|.|..|       ...+..+.+|-
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C-------~~stttng~Ls  535 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRAC-------NYSTTTNGNLS  535 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceee-------eeeeecchHHH
Confidence            4789999999999999999999998541111   110         0112335577888877       99999999999


Q ss_pred             hhhhh--ccC-----------------------------------------CccccccCCCCcccChHHHhhhhhh-cCC
Q 010389          126 KHFCR--KHG-----------------------------------------EKKWKCDKCSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       126 ~H~~~--H~g-----------------------------------------ekp~~C~~C~k~F~~~~~L~~H~~~-h~~  161 (512)
                      +|++.  |..                                         +-.|.|.+|++...-..+|+.|+.. +..
T Consensus       536 ihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s  615 (1406)
T KOG1146|consen  536 IHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSS  615 (1406)
T ss_pred             HHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCC
Confidence            99864  200                                         1138899999988888899999887 444


Q ss_pred             cc-eecc-CCCccCChhHHHHHHHHh
Q 010389          162 KE-YKCN-CGAVFSRRDSFITHRAFC  185 (512)
Q Consensus       162 kp-y~C~-Cgk~F~~~~~L~~H~~~h  185 (512)
                      .+ ..|. |.-.+.....+..|.+.+
T Consensus       616 ~~p~~~Lq~~it~~l~~~~~~~~~lp  641 (1406)
T KOG1146|consen  616 SPPSLVLQQNITSSLASLLGGQGRLP  641 (1406)
T ss_pred             CChHHHhhhcchhhccccccCcCCCC
Confidence            43 7776 777776666666555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.17  E-value=0.0029  Score=46.60  Aligned_cols=29  Identities=17%  Similarity=0.300  Sum_probs=11.5

Q ss_pred             CccccccCCCCcccChHHHhhhhhh-cCCc
Q 010389          134 EKKWKCDKCSKKYAVQSDYKAHSKV-CGTK  162 (512)
Q Consensus       134 ekp~~C~~C~k~F~~~~~L~~H~~~-h~~k  162 (512)
                      +.|..|.+|+..+.+..+|++|+.+ |+.|
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3444455555555555555555544 4433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.08  E-value=0.0075  Score=63.06  Aligned_cols=139  Identities=14%  Similarity=0.139  Sum_probs=87.1

Q ss_pred             CCCCCCCchhhhhcCcc--ccCCC--CCeecc--ccCcccCChHHHHHHHHhcCCCc--hhh--c---------------
Q 010389           37 LPGTPDPDAEVIALSPK--TLLAT--NRFVCE--ICNKGFQRDQNLQLHRRGHNLPW--KLR--Q---------------   91 (512)
Q Consensus        37 ~~~~~~~~~~~~~~~~~--~~~~~--k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~--~~~--~---------------   91 (512)
                      ...........+..+.+  .|..+  ++|.|+  .|++.|.+...+.+|...|....  .+.  .               
T Consensus       294 ~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (467)
T COG5048         294 QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNNEPPQ  373 (467)
T ss_pred             cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCCCCcc
Confidence            33344444445555566  68888  999999  79999999999999999987211  110  0               


Q ss_pred             ---ccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc--cccccCCCCcccChHHHhhhhhhcCCcceec
Q 010389           92 ---RSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK--KWKCDKCSKKYAVQSDYKAHSKVCGTKEYKC  166 (512)
Q Consensus        92 ---~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek--p~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C  166 (512)
                         ........+.+.|..-     .|.+.+.....+..|...|-..+  .+.|..|.+.|.....+..|++.|....+.|
T Consensus       374 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         374 SLQQYKDLKNDKKSETLSN-----SCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             chhhccCccCCcccccccc-----chhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence               0001112233344332     23677777777888877777655  4566778888888888888888854444444


Q ss_pred             c-CCCccCChhHHHH
Q 010389          167 N-CGAVFSRRDSFIT  180 (512)
Q Consensus       167 ~-Cgk~F~~~~~L~~  180 (512)
                      . +-+.|.....+..
T Consensus       449 ~~~~~~~~~~~~~~~  463 (467)
T COG5048         449 CSILKSFRRDLDLSN  463 (467)
T ss_pred             eccccccchhhhhhc
Confidence            3 5555555444433

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.93  E-value=0.005  Score=38.54  Aligned_cols=23  Identities=43%  Similarity=0.980  Sum_probs=21.6

Q ss_pred             eeccccCcccCChHHHHHHHHhc
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      |.|.+|++.|.++..|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999875

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.86  E-value=0.0048  Score=45.48  Aligned_cols=33  Identities=15%  Similarity=0.286  Sum_probs=18.3

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcc
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKK  136 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp  136 (512)
                      ..+.|..|++|       +..+....+|++|+.++|+.||
T Consensus        20 ~S~~PatCP~C-------~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPIC-------GAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT---------EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcc-------hhhccchhhHHHHHHHHhcccC
Confidence            34566677777       6777777777777776666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=95.75  E-value=0.0047  Score=57.34  Aligned_cols=29  Identities=17%  Similarity=0.515  Sum_probs=18.6

Q ss_pred             ChhhHHhhhhhccCCccccccCCCCcccC
Q 010389          120 DLTGIKKHFCRKHGEKKWKCDKCSKKYAV  148 (512)
Q Consensus       120 ~~~~Lk~H~~~H~gekp~~C~~C~k~F~~  148 (512)
                      ....+++|.++|+++++|+|..|++.|..
T Consensus       127 ~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        127 HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            45566666666666666666666666553

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=95.62  E-value=0.007  Score=38.61  Aligned_cols=25  Identities=16%  Similarity=0.406  Sum_probs=15.0

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      +|+|.+|       ++.|.+...|..|++.|+
T Consensus         1 ~~~C~~C-------~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDEC-------GKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTT-------TEEESSHHHHHHHHCTTT
T ss_pred             CCCCCcc-------CCccCChhHHHHHhHHhc
Confidence            3556665       666666666666665554

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.57  E-value=0.0072  Score=63.17  Aligned_cols=107  Identities=20%  Similarity=0.257  Sum_probs=74.8

Q ss_pred             CCeeccccCcccCChHHHHHHHH--hcCCCchhhcccccccCC--cceeCC--CCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRR--GHNLPWKLRQRSNKEVKK--RVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r--~H~~p~~~~~~~~~~~~~--k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      .++.|..|.+.|.+...|.+|.+  .|.             .+  +++.|+  .|       ++.|.....+++|...|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~-------------~~~~~~~~~p~~~~-------~~~~~~~~~~~~~~~~~~  347 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHS-------------GESLKPFSCPYSLC-------GKLFSRNDALKRHILLHT  347 (467)
T ss_pred             cCCCCccccCCccccccccccccccccc-------------cccCCceeeeccCC-------CccccccccccCCccccc
Confidence            47899999999999999999999  676             66  899999  67       999999999999999999


Q ss_pred             CCccccccC--CCCcccChHHHhhhh-----hh-cCCcceecc---CCCccCChhHHHHHHHHh
Q 010389          133 GEKKWKCDK--CSKKYAVQSDYKAHS-----KV-CGTKEYKCN---CGAVFSRRDSFITHRAFC  185 (512)
Q Consensus       133 gekp~~C~~--C~k~F~~~~~L~~H~-----~~-h~~kpy~C~---Cgk~F~~~~~L~~H~~~h  185 (512)
                      +.+++.|..  |.+.+.....-..+.     .. +..+.+.|.   |...+.+...+..|...|
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (467)
T COG5048         348 SISPAKEKLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITH  411 (467)
T ss_pred             CCCccccccccCccccccccCCCCccchhhccCccCCccccccccchhhhhccccccccccccc
Confidence            888777755  555544333311111     11 334455554   555555555555554333

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.38  E-value=0.01  Score=69.49  Aligned_cols=104  Identities=13%  Similarity=0.136  Sum_probs=66.7

Q ss_pred             ccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           63 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        63 C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      |.-|+..|.++..+.-|+..-+            ...+.|+|+.|       +..|+....|..|||..|-+-.-  .+|
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~------------S~~kt~~cpkc-------~~~yk~a~~L~vhmRskhp~~~~--~~c  497 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLH------------SFFKTLKCPKC-------NWHYKLAQTLGVHMRSKHPESQS--AYC  497 (1406)
T ss_pred             ccchhhhhhhhcccccceeeee------------cccccccCCcc-------chhhhhHHHhhhcccccccccch--hHh
Confidence            4445555555555555543322            35588999999       99999999999999985533211  444


Q ss_pred             CCcccChHHHhh-hhhhcCCcceecc-CCCccCChhHHHHHHHHhcCc
Q 010389          143 SKKYAVQSDYKA-HSKVCGTKEYKCN-CGAVFSRRDSFITHRAFCDML  188 (512)
Q Consensus       143 ~k~F~~~~~L~~-H~~~h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~  188 (512)
                      ... .....+.+ -....+.++|.|. |...|..+.+|.+|++.....
T Consensus       498 ~~g-q~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~~h~  544 (1406)
T KOG1146|consen  498 KAG-QNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSDLHR  544 (1406)
T ss_pred             Hhc-cccccccccccccCCCCcccceeeeeeeecchHHHHHHHHHhhH
Confidence            222 11111111 1111566899999 999999999999998765443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.76  E-value=0.009  Score=38.32  Aligned_cols=23  Identities=30%  Similarity=0.800  Sum_probs=21.2

Q ss_pred             eeccccCcccCChHHHHHHHHhc
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      |.|..|++.|.+...|+.|++.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998754

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.54  E-value=0.024  Score=35.10  Aligned_cols=23  Identities=26%  Similarity=0.600  Sum_probs=19.2

Q ss_pred             eeccccCcccCChHHHHHHHHhcC
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |+|+.|+.... +.+|++|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999999998 999999999875

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=94.39  E-value=0.015  Score=55.14  Aligned_cols=82  Identities=20%  Similarity=0.437  Sum_probs=68.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-c----------CCcceec
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-C----------GTKEYKC  166 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h----------~~kpy~C  166 (512)
                      ....|.|++-+|     ...|.....+..|..+-|+   -.|.+|.+.|.+...|..|+.- |          |.-.|.|
T Consensus        76 ~~~~~~cqvagc-----~~~~d~lD~~E~hY~~~h~---~sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~C  147 (253)
T KOG4173|consen   76 RVPAFACQVAGC-----CQVFDALDDYEHHYHTLHG---NSCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQC  147 (253)
T ss_pred             ccccccccccch-----HHHHhhhhhHHHhhhhccc---chhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHH
Confidence            446788999877     8889888888888766554   3799999999999999999876 6          4567999


Q ss_pred             c---CCCccCChhHHHHHHHHhcC
Q 010389          167 N---CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       167 ~---Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      -   |+..|.+...-++|+-..|.
T Consensus       148 lvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  148 LVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             HHHhhhhhhhhhhhhhhHHHHhcc
Confidence            6   99999999999999866665

>PRK04860 hypothetical protein; Provisional

Probab=93.94  E-value=0.033  Score=51.78  Aligned_cols=39  Identities=21%  Similarity=0.374  Sum_probs=32.8

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCCh
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDL  121 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~  121 (512)
                      -+|.|. |++   ....+++|.++|.             ++++|+|..|       +..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~-------------g~~~YrC~~C-------~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVR-------------GEAVYRCRRC-------GETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhc-------------CCccEECCCC-------CceeEEe
Confidence            479998 998   6778999999998             8999999999       6666543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=93.93  E-value=0.034  Score=34.47  Aligned_cols=23  Identities=30%  Similarity=0.691  Sum_probs=12.5

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389          102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       102 ~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      |+|++|       ..... +..|++|+++|+
T Consensus         1 y~C~~C-------~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHC-------SYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSS-------S-EES-HHHHHHHHHHHH
T ss_pred             CCCCCC-------CCcCC-HHHHHHHHHhhC
Confidence            456666       55555 566666666654

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=93.66  E-value=0.052  Score=60.52  Aligned_cols=83  Identities=28%  Similarity=0.569  Sum_probs=53.0

Q ss_pred             eccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc-
Q 010389           62 VCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD-  140 (512)
Q Consensus        62 ~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~-  140 (512)
                      .|..|...|.....|.+|++.+|                 |.|.+|.- -..+..-|.+...|..|.+.+|    |.|. 
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h-----------------~~chfC~~-~~~~neyy~~~~dLe~HfR~~H----flCE~  241 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDH-----------------EFCHFCDY-KTGQNEYYNDYDDLEEHFRKGH----FLCEE  241 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccce-----------------eheeecCc-ccccchhcccchHHHHHhhhcC----ccccc
Confidence            47777777777777777776665                 67777732 2334778888999999999887    6776 


Q ss_pred             -CCC-CcccC----hHHHhhhhhh-cCCcceec
Q 010389          141 -KCS-KKYAV----QSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       141 -~C~-k~F~~----~~~L~~H~~~-h~~kpy~C  166 (512)
                       .|- +.|..    ...|++|.+. ..++-|.|
T Consensus       242 ~~C~~~~f~~~~~~ei~lk~~~~~~~~e~~~~~  274 (669)
T KOG2231|consen  242 EFCRTKKFYVAFELEIELKAHNRFIQHEKCYIC  274 (669)
T ss_pred             cccccceeeehhHHHHHHHhhccccchheeccC
Confidence             443 23333    3344444433 34555666

>smart00355 ZnF_C2H2 zinc finger

Probab=93.63  E-value=0.045  Score=33.58  Aligned_cols=17  Identities=12%  Similarity=0.315  Sum_probs=8.9

Q ss_pred             CCccCChhhHHhhhhhc
Q 010389          115 TRALGDLTGIKKHFCRK  131 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H  131 (512)
                      ++.|.....|..|++.|
T Consensus         7 ~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        7 GKVFKSKSALKEHMRTH   23 (26)
T ss_pred             cchhCCHHHHHHHHHHh
Confidence            55555555555555543

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.24  E-value=0.051  Score=34.78  Aligned_cols=22  Identities=32%  Similarity=0.741  Sum_probs=13.2

Q ss_pred             ccccCCCCcccChHHHhhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |.|.+|++.|.....|+.|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666553

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=92.73  E-value=0.05  Score=33.88  Aligned_cols=20  Identities=25%  Similarity=0.752  Sum_probs=8.7

Q ss_pred             cccCCCCcccChHHHhhhhh
Q 010389          138 KCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       138 ~C~~C~k~F~~~~~L~~H~~  157 (512)
                      .|.+|++.|.....|+.|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444443

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=91.85  E-value=0.24  Score=50.60  Aligned_cols=87  Identities=17%  Similarity=0.326  Sum_probs=63.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccC----------------------CccccccCCCCcccChHHHhhh
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG----------------------EKKWKCDKCSKKYAVQSDYKAH  155 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g----------------------ekp~~C~~C~k~F~~~~~L~~H  155 (512)
                      .....+|-+|-      ......++.+-.|+-..|+                      -..++|-+|.|.|..+..|+.|
T Consensus       141 t~fslqClFCn------~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdkntLkeH  214 (423)
T KOG2482|consen  141 TIFSLQCLFCN------NEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDKNTLKEH  214 (423)
T ss_pred             CeeeeEEEEec------chhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCcHHHHHH
Confidence            34556788872      3455667778888765443                      1237899999999999999999


Q ss_pred             hhh--cC-----------------------------------------------------Ccc--eecc-CCCccCChhH
Q 010389          156 SKV--CG-----------------------------------------------------TKE--YKCN-CGAVFSRRDS  177 (512)
Q Consensus       156 ~~~--h~-----------------------------------------------------~kp--y~C~-Cgk~F~~~~~  177 (512)
                      ||.  |.                                                     ..+  .+|- |...+-....
T Consensus       215 MrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~  294 (423)
T KOG2482|consen  215 MRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVF  294 (423)
T ss_pred             HHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHH
Confidence            987  50                                                     111  4788 9998888999


Q ss_pred             HHHHHHHhcCcch
Q 010389          178 FITHRAFCDMLTK  190 (512)
Q Consensus       178 L~~H~~~hh~~~~  190 (512)
                      |..||+..|...-
T Consensus       295 l~eHmk~vHe~Dl  307 (423)
T KOG2482|consen  295 LFEHMKIVHEFDL  307 (423)
T ss_pred             HHHHHHHHHHhhH
Confidence            9999999886433

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=91.57  E-value=0.16  Score=51.77  Aligned_cols=25  Identities=32%  Similarity=0.611  Sum_probs=22.5

Q ss_pred             CCeeccccCcccCChHHHHHHHHhc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      .++.|-.|.|.|+.+..|+.|||..
T Consensus       194 ~r~~CLyCekifrdkntLkeHMrkK  218 (423)
T KOG2482|consen  194 ERLRCLYCEKIFRDKNTLKEHMRKK  218 (423)
T ss_pred             hhheeeeeccccCCcHHHHHHHHhc
Confidence            4689999999999999999999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.88  E-value=0.21  Score=31.56  Aligned_cols=21  Identities=29%  Similarity=0.680  Sum_probs=18.1

Q ss_pred             eeccccCcccCChHHHHHHHHh
Q 010389           61 FVCEICNKGFQRDQNLQLHRRG   82 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~   82 (512)
                      ..|++|++.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67789999864

>KOG4377 consensus Zn-finger protein [General function prediction only]

Probab=90.77  E-value=0.22  Score=52.03  Aligned_cols=121  Identities=13%  Similarity=0.232  Sum_probs=71.2

Q ss_pred             CCeec--cccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC--
Q 010389           59 NRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE--  134 (512)
Q Consensus        59 k~f~C--~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge--  134 (512)
                      .-|.|  +.|+..+-.+.++.+|.++|.+..........+ -...|.|-.-     +|.+   +-.....|-.-|+..  
T Consensus       270 Ehyhcl~e~C~ykr~~k~DvirH~~~hkkrdnsL~dgf~r-fs~syhC~~~-----~C~k---sTsdV~~h~nFht~~~n  340 (480)
T KOG4377|consen  270 EHYHCLNEYCFYKRGQKNDVIRHVEIHKKRDNSLIDGFHR-FSNSYHCTGQ-----ICEK---STSDVLLHDNFHTDKRN  340 (480)
T ss_pred             hhhcccCccccccccchhhhHHHHHHHhhcccccccchhh-cCccchhhhc-----ccCc---ccccccccCcccccccc
Confidence            34777  459888888999999999996211100000000 0112455433     4466   556667776666532  


Q ss_pred             -----ccccccCCC--CcccChHHHhhhhhhc-----C--------------------Ccceecc---CCCccCChhHHH
Q 010389          135 -----KKWKCDKCS--KKYAVQSDYKAHSKVC-----G--------------------TKEYKCN---CGAVFSRRDSFI  179 (512)
Q Consensus       135 -----kp~~C~~C~--k~F~~~~~L~~H~~~h-----~--------------------~kpy~C~---Cgk~F~~~~~L~  179 (512)
                           ..|.|..|+  ..|+...+-..|.+-+     |                    -..|.|.   |+.+|.....+.
T Consensus       341 ~GfrrthfhC~r~gCTdtfK~~khk~yh~kdda~~~dGfkkf~k~e~cay~gCkys~~cnhfhc~r~Gc~~tl~s~sqm~  420 (480)
T KOG4377|consen  341 NGFRRTHFHCQRIGCTDTFKDSKHKPYHYKDDAGEIDGFKKFFKDENCAYTGCKYSGICNHFHCDRLGCEATLYSVSQMA  420 (480)
T ss_pred             CceecceeEEeccCCccccccccccccccCcchhhhhhhhhhhccccCCccCcccccceeeeeecccCCceEEEehhhhh
Confidence                 237788877  5555333333333221     0                    0235676   999999999999


Q ss_pred             HHHHHhcCc
Q 010389          180 THRAFCDML  188 (512)
Q Consensus       180 ~H~~~hh~~  188 (512)
                      .|.++|...
T Consensus       421 shkrkheRq  429 (480)
T KOG4377|consen  421 SHKRKHERQ  429 (480)
T ss_pred             hhhhhhhhh
Confidence            999998754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.08  E-value=0.23  Score=33.43  Aligned_cols=24  Identities=29%  Similarity=0.796  Sum_probs=21.7

Q ss_pred             CeeccccCcccCChHHHHHHHHhc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      +|.|++|++.|.....+..|++..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHChH
Confidence            689999999999999999998754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=90.06  E-value=0.47  Score=49.31  Aligned_cols=118  Identities=24%  Similarity=0.418  Sum_probs=84.4

Q ss_pred             CeeccccCcccCChHHHHHHHHh--cC---------CC-ch---hhcc---------cccccCCcceeCCCCCCCCCCCC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRG--HN---------LP-WK---LRQR---------SNKEVKKRVYVCPEKSCVHHDPT  115 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~--H~---------~p-~~---~~~~---------~~~~~~~k~~~C~~C~C~~~~~~  115 (512)
                      -|.|.-|...|.....-+.|+++  |.         .| ..   +..+         ...+...-++.|..|       .
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c-------~   75 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEAC-------N   75 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHh-------h
Confidence            48999999999999888889764  43         11 00   0000         012445678999999       9


Q ss_pred             CccCChhhHHhhhhhcc---------------------------------C--C--------------------------
Q 010389          116 RALGDLTGIKKHFCRKH---------------------------------G--E--------------------------  134 (512)
Q Consensus       116 k~F~~~~~Lk~H~~~H~---------------------------------g--e--------------------------  134 (512)
                      |.|........|++...                                 +  +                          
T Consensus        76 k~~~s~~a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~  155 (390)
T KOG2785|consen   76 KSFASPKAHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIE  155 (390)
T ss_pred             ccccChhhHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhh
Confidence            99999888877765310                                 0  0                          


Q ss_pred             ---------ccccccCCCCcccChHHHhhhhhh-cC-----------------------Ccceecc-CC---CccCChhH
Q 010389          135 ---------KKWKCDKCSKKYAVQSDYKAHSKV-CG-----------------------TKEYKCN-CG---AVFSRRDS  177 (512)
Q Consensus       135 ---------kp~~C~~C~k~F~~~~~L~~H~~~-h~-----------------------~kpy~C~-Cg---k~F~~~~~  177 (512)
                               -|-.|-+|++.|........||.. |+                       ..-|.|- |+   +.|..-..
T Consensus       156 ~d~~~e~e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~slea  235 (390)
T KOG2785|consen  156 EDGDDEDELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEA  235 (390)
T ss_pred             hccchhcccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHH
Confidence                     013489999999999999999988 74                       2347888 88   89999999


Q ss_pred             HHHHHHH
Q 010389          178 FITHRAF  184 (512)
Q Consensus       178 L~~H~~~  184 (512)
                      .+.||..
T Consensus       236 vr~HM~~  242 (390)
T KOG2785|consen  236 VRAHMRD  242 (390)
T ss_pred             HHHHHhh
Confidence            9999854

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.55  E-value=0.29  Score=50.02  Aligned_cols=79  Identities=18%  Similarity=0.336  Sum_probs=56.1

Q ss_pred             eeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      -.|..|.+.|.....|.+|+|..|              ++.|.|+.-   -..-..-|++...|.+|++.-|    |.|.
T Consensus       221 P~C~FC~~~FYdDDEL~~HcR~~H--------------E~ChICD~v---~p~~~QYFK~Y~~Le~HF~~~h----y~ct  279 (493)
T COG5236         221 PLCIFCKIYFYDDDELRRHCRLRH--------------EACHICDMV---GPIRYQYFKSYEDLEAHFRNAH----YCCT  279 (493)
T ss_pred             chhhhccceecChHHHHHHHHhhh--------------hhhhhhhcc---CccchhhhhCHHHHHHHhhcCc----eEEE
Confidence            369999999999999999998764              444444332   2222345888899999997654    7776


Q ss_pred             C--CC----CcccChHHHhhhhhh-cC
Q 010389          141 K--CS----KKYAVQSDYKAHSKV-CG  160 (512)
Q Consensus       141 ~--C~----k~F~~~~~L~~H~~~-h~  160 (512)
                      +  |-    ..|...-.|..|+.. |+
T Consensus       280 ~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         280 FQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             EEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            5  32    357777788888766 64

>KOG4173 consensus Alpha-SNAP protein [Intracellular trafficking, secretion, and vesicular transport]

Probab=88.53  E-value=0.15  Score=48.60  Aligned_cols=81  Identities=21%  Similarity=0.377  Sum_probs=65.1

Q ss_pred             CCCCCeeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc-
Q 010389           56 LATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-  132 (512)
Q Consensus        56 ~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~-  132 (512)
                      .....|.|.+  |-..|....++..|..+-|                --.|.+|       .+.|.+..-|..|+..-| 
T Consensus        75 ~~~~~~~cqvagc~~~~d~lD~~E~hY~~~h----------------~~sCs~C-------~r~~Pt~hLLd~HI~E~HD  131 (253)
T KOG4173|consen   75 PRVPAFACQVAGCCQVFDALDDYEHHYHTLH----------------GNSCSFC-------KRAFPTGHLLDAHILEWHD  131 (253)
T ss_pred             cccccccccccchHHHHhhhhhHHHhhhhcc----------------cchhHHH-------HHhCCchhhhhHHHHHHHH
Confidence            3456789998  8899998888888876544                2368888       999999999999987644 


Q ss_pred             ---------CCccccccC--CCCcccChHHHhhhhhh-c
Q 010389          133 ---------GEKKWKCDK--CSKKYAVQSDYKAHSKV-C  159 (512)
Q Consensus       133 ---------gekp~~C~~--C~k~F~~~~~L~~H~~~-h  159 (512)
                               |...|.|-+  |+..|.+....++|+-. |
T Consensus       132 s~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  132 SLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence                     344699966  99999999999999877 5

>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]

Probab=87.03  E-value=0.94  Score=47.15  Aligned_cols=51  Identities=20%  Similarity=0.297  Sum_probs=43.2

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC-----------------------ccccccCCC---CcccChHHHhh
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE-----------------------KKWKCDKCS---KKYAVQSDYKA  154 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge-----------------------kp~~C~~C~---k~F~~~~~L~~  154 (512)
                      |-.|-+|       .+.|.+...-.+||..||+-                       +-|.|-+|.   +.|......+.
T Consensus       166 Pt~CLfC-------~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~  238 (390)
T KOG2785|consen  166 PTDCLFC-------DKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRA  238 (390)
T ss_pred             Ccceeec-------CCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHH
Confidence            3456666       99999999999999999871                       337899999   99999999999


Q ss_pred             hhhh
Q 010389          155 HSKV  158 (512)
Q Consensus       155 H~~~  158 (512)
                      ||..
T Consensus       239 HM~~  242 (390)
T KOG2785|consen  239 HMRD  242 (390)
T ss_pred             HHhh
Confidence            9987

>KOG2071 consensus mRNA cleavage and polyadenylation factor I/II complex, subunit Pcf11 [RNA processing and modification]

Probab=86.96  E-value=1.4  Score=48.54  Aligned_cols=30  Identities=20%  Similarity=0.368  Sum_probs=25.9

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ....++-+|..||+.|.+.....+||..|-
T Consensus       413 Ly~~~pnqC~~CG~R~~~~ee~sk~md~H~  442 (579)
T KOG2071|consen  413 LYKDSPNQCKSCGLRFDDSEERSKHMDIHD  442 (579)
T ss_pred             hccCCcchhcccccccccchhhhhHhhhhh
Confidence            345667899999999999999999999884

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=86.27  E-value=0.23  Score=48.26  Aligned_cols=22  Identities=27%  Similarity=0.693  Sum_probs=15.6

Q ss_pred             ccccCcccCChHHHHHHHHhcC
Q 010389           63 CEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        63 C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |=.|++.|..+.-|..|++..|
T Consensus        13 cwycnrefddekiliqhqkakh   34 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKAKH   34 (341)
T ss_pred             eeecccccchhhhhhhhhhhcc
Confidence            6777777777777777766543

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=86.23  E-value=0.25  Score=47.99  Aligned_cols=38  Identities=26%  Similarity=0.411  Sum_probs=28.2

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhh
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHS  156 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~  156 (512)
                      ++.|.+..-|.+|.+..    .|+|.+|.|....--.|..|-
T Consensus        17 nrefddekiliqhqkak----hfkchichkkl~sgpglsihc   54 (341)
T KOG2893|consen   17 NREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHC   54 (341)
T ss_pred             ccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeeh
Confidence            88888888888887653    488888888766655666653

>KOG2186 consensus Cell growth-regulating nucleolar protein [Cell cycle control, cell division, chromosome partitioning]

Probab=85.27  E-value=0.49  Score=46.53  Aligned_cols=44  Identities=25%  Similarity=0.677  Sum_probs=23.8

Q ss_pred             ccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCChhHHHHHH
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITHR  182 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H~  182 (512)
                      |.|.+||-.... ..+.+|+..+...-|.|. |++.|-+ ..++.|.
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCCeeEEeeccccccc-chhhhhh
Confidence            556666655433 244556666333556666 6666655 4455553

>smart00451 ZnF_U1 U1-like zinc finger

Probab=84.87  E-value=0.61  Score=31.30  Aligned_cols=23  Identities=22%  Similarity=0.445  Sum_probs=16.8

Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +|.|.+|++.|.....++.|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            46777777777777777777664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=84.47  E-value=0.66  Score=29.26  Aligned_cols=19  Identities=26%  Similarity=0.684  Sum_probs=9.5

Q ss_pred             cccCCCCcccChHHHhhhhh
Q 010389          138 KCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       138 ~C~~C~k~F~~~~~L~~H~~  157 (512)
                      .|.+|++.| ....|.+|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4444555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	512
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-10
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-06
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	7e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-06
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-06
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-05
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-04
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	7e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 30/130 (23%)

Query: 61  FVCE--ICNKGFQRDQNLQLHRRGHN--LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTR 116
           F+C    CNK + +  +LQ+H R H    P               Y C  K C      R
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKP---------------YQCDFKDC-----ER 46

Query: 117 ALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAV 171
                  +K+H  R+H G K ++C  C +K++     K H++   G K + C    C   
Sbjct: 47  RFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105

Query: 172 FSRRDSFITH 181
           F+R D  + H
Sbjct: 106 FARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 46.7 bits (112), Expect = 1e-06
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 11/86 (12%)

Query: 102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKCDK--CSKKYAVQSDYKAHSKV 158
           ++C    C      +    L+ ++ H  RKH GEK ++CD   C ++++     K H + 
Sbjct: 7   FMCAYPGC-----NKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

Query: 159 -CGTKEYKCN-CGAVFSRRDSFITHR 182
             G K ++C  C   FSR D   TH 
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHT 86

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.1 bits (131), Expect = 1e-08
 Identities = 28/149 (18%), Positives = 40/149 (26%), Gaps = 32/149 (21%)

Query: 60  RFVCEI--CNKGFQRDQNLQLHRRGHN--LPWK---------LRQRSNKEVKKRV----- 101
           R++C    C   + ++  LQ H   H    P+               +            
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71

Query: 102 -YVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW--KCDK--CSKKYAVQSDYKAHS 156
            + C    C              +KKHF R H  K     C    C K +   +  K H 
Sbjct: 72  NFTCDSDGC-----DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQ 126

Query: 157 KV-CGTKEYKCN---CGAVFSRRDSFITH 181
                   Y+C    C   FS       H
Sbjct: 127 FSHTQQLPYECPHEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 7/60 (11%)

Query: 130 RKH-GEKKWKCD--KCSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAVFSRRDSFITHR 182
            KH GEK + C    C K +        HS    G K + C+   C   F+ + +   H 
Sbjct: 35  CKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHF 94

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 30/150 (20%), Positives = 49/150 (32%), Gaps = 37/150 (24%)

Query: 63  CEICNKGFQRDQNLQLHRR----------------GHNLPWKL-RQRSNKEVKKRV---- 101
            + C++ F   + L  H                  G +   +  + +    V  R     
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65

Query: 102 --YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKC--DKCSKKYAVQSDYKAHS 156
             + C  + C      ++   L  +K H  R H GEK + C  + CSK ++  SD   H 
Sbjct: 66  KPHKCTFEGC-----RKSYSRLENLKTHL-RSHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119

Query: 157 KVC--GTKEYKCN---CGAVFSRRDSFITH 181
                  K Y C    C   ++   S   H
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 27/105 (25%)

Query: 61  FVCEI--CNKGFQRDQNLQLHRRGHN--LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTR 116
             C    C K + R +NL+ H R H    P               Y+C  + C     ++
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKP---------------YMCEHEGC-----SK 107

Query: 117 ALGDLTGIKKHFCRKH-GEKKWKCDK--CSKKYAVQSDYKAHSKV 158
           A  + +   KH  R H  EK + C    C+K+Y   S  + H K 
Sbjct: 108 AFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 10/58 (17%)

Query: 134 EKKWKCDKCSKKYAVQSDYKAHSKVC----GTKEYKCN-CGAV-----FSRRDSFITH 181
           E   + D CS+++  Q     H          KE+ C+  G       F  +   + H
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 51.0 bits (123), Expect = 3e-08
 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CG 160
             CP K C     T+   D + ++KH    HG +   C +C K +   S  K H  V  G
Sbjct: 6   IACPHKGC-----TKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTG 59

Query: 161 TKEYKCN---CGAVFSRRDSFITH 181
            K ++C    CG  FS   +  TH
Sbjct: 60  EKPFQCTFEGCGKRFSLDFNLRTH 83

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.8 bits (107), Expect = 5e-06
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 33/128 (25%)

Query: 63  CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDPTRALGD 120
            + C K F+ +  ++ H   H                RV+VC E  K+ V          
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHG--------------PRVHVCAECGKAFVE------SSK 49

Query: 121 LTGIKKHFCRKH-GEKKWKC--DKCSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAVFS 173
           L   K+H    H GEK ++C  + C K++++  + + H ++  G + Y C    C   F+
Sbjct: 50  L---KRHQ-LVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 105

Query: 174 RRDSFITH 181
           +  +  +H
Sbjct: 106 QSTNLKSH 113

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKVC---GTKEYKCN-CGAVFSRRDSFITHR 182
               GE  ++C  CS+ Y   S++  H         K Y C  C   F+R+D+   H 
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.1 bits (126), Expect = 5e-08
 Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 30/142 (21%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHN--LPWK-------LRQRSNKEVKKRV------YVCP 105
           + C  C K F R  +L  H+R H    P+K          + +    +R       Y CP
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 106 E--KSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGT 161
           E  KS           +L     H  R H GEK + C +C K ++  +  +AH +   G 
Sbjct: 82  ECGKSFSQR------ANLR---AHQ-RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

Query: 162 KEYKCN-CGAVFSRRDSFITHR 182
           K YKC  CG  FSR D+  TH+
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQ 153

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 45/141 (31%), Positives = 60/141 (42%), Gaps = 30/141 (21%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHN--LPWK-------LRQRSNKEVKKRV------YVCP 105
           + C  C K F   ++L  H+R H    P+K         QR+N    +R       Y CP
Sbjct: 50  YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP 109

Query: 106 E--KSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGT 161
           E  KS            L     H  R H GEK +KC +C K ++ + +   H +   G 
Sbjct: 110 ECGKSFSQL------AHLR---AH-QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

Query: 162 KEYKCN-CGAVFSRRDSFITH 181
           K YKC  CG  FSRRD+   H
Sbjct: 160 KPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 40.9 bits (97), Expect = 3e-04
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
               GEK + C +C K ++       H +   G K YKC  CG  FS +     H+
Sbjct: 14  ALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQ 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 48.6 bits (117), Expect = 8e-08
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
                +K +KCD+C   +  + +  +H  V  G K Y+CN CGA F+R  +  TH 
Sbjct: 10  HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-C 159
           Y CP +SC      R       + +H  R H G+K ++C  C + ++       H +   
Sbjct: 5   YACPVESC-----DRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

Query: 160 GTKEYKCN-CGAVFSRRDSFITHR 182
           G K + C+ CG  F+R D    H 
Sbjct: 59  GEKPFACDICGRKFARSDERKRHT 82

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 46.7 bits (112), Expect = 3e-07
 Identities = 11/57 (19%), Positives = 22/57 (38%), Gaps = 3/57 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRA 183
                    KC +CS   + ++  + H ++ C  + +KCN C     +  +   H  
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 123 GIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFI 179
           G        H GEK + C +C K ++  S    H +V  G K YKC  CG  FS+    I
Sbjct: 1   GSSGS-SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

Query: 180 THR 182
            H+
Sbjct: 60  NHQ 62

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 91  QRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKC--DKCSKKYA 147
                  K+R++ C    C     T+     + +K H  R H GEK +KC  + C  ++A
Sbjct: 5   SSGPDLEKRRIHYCDYPGC-----TKVYTKSSHLKAHL-RTHTGEKPYKCTWEGCDWRFA 58

Query: 148 VQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
              +   H +   G K ++C  C   FSR D    H 
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 30/105 (28%)

Query: 61  FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRA- 117
             C+   C K + +  +L+ H R H               ++ Y C  + C         
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHT-------------GEKPYKCTWEGC-----DWRF 57

Query: 118 --LGDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDY-KAHSKV 158
               +LT   +H+ RKH G K ++C  C++ ++ +SD+   H K 
Sbjct: 58  ARSDELT---RHY-RKHTGAKPFQCGVCNRSFS-RSDHLALHMKR 97

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 6e-07
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITH 181
            +    +++KCD+C K ++  SD   H +   G K YKC+ CG  F +R   I H
Sbjct: 11  WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 22/100 (22%)

Query: 61  FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRAL 118
           +VC    C K F++   L++H+  H              ++  Y CP + C      +  
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-----DKRF 43

Query: 119 GDLTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSK 157
              + +K+H  + H G    K D CS      + Y  H  
Sbjct: 44  SLPSRLKRHE-KVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 48.1 bits (115), Expect = 7e-07
 Identities = 27/135 (20%), Positives = 42/135 (31%), Gaps = 34/135 (25%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGH----------NLPWKL--------RQRSNKEVKKRV- 101
              + C++ F     L  H                 W+         + +       RV 
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 102 -----YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKC--DKCSKKYAVQSDYK 153
                + CP   C      +       +K H  R H GEK +KC  + C +++A  SD K
Sbjct: 86  TGEKPFPCPFPGC-----GKIFARSENLKIHK-RTHTGEKPFKCEFEGCDRRFANSSDRK 139

Query: 154 AHSKV-CGTKEYKCN 167
            H  V    K    +
Sbjct: 140 KHMHVHTSDKSGPSS 154

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 14/62 (22%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 125 KKHFCRKH-GEKKWKCDKCSKKYAVQSDYKAHSKV---CGTKEYKCN-CGAVFSRRDSFI 179
                R H GEK ++C  C  ++      K H          ++ C  C  V +R+    
Sbjct: 4   GSSG-RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 180 TH 181
            H
Sbjct: 63  VH 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 5/55 (9%)

Query: 133 GEKKWKCDKCSKKYAVQSDYKAH----SKVCGTKEYKCN-CGAVFSRRDSFITHR 182
           G    +C+ C      ++    H    ++      + C  CG  F + DS   HR
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR 58

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.1 bits (94), Expect = 9e-05
 Identities = 13/108 (12%), Positives = 22/108 (20%), Gaps = 45/108 (41%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
             CEIC    ++  +L  H+R H                                     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHA------------------------------------ 31

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCNC 168
                          ++ C+ C K++       AH             
Sbjct: 32  ---------ETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ 70

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKVCGT----KEYKCN-CGAVFSRRDSFITH 181
           RKH GEK ++C KC K Y  + +   H          + + C+ C   F RR     H
Sbjct: 28  RKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 28/138 (20%), Positives = 45/138 (32%), Gaps = 49/138 (35%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHN--LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRAL 118
             C  C+K F     L++H R H    P               + CP+  C         
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKP---------------FECPK--C--------- 41

Query: 119 GDLTGIKKHFCRK-----H--------GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEY 164
               G  K + RK     H         E+ + C  C + +  + + + H     G   Y
Sbjct: 42  ----G--KCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPY 95

Query: 165 KCN-CGAVFSRRDSFITH 181
           KC+ C   F ++    +H
Sbjct: 96  KCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 43.6 bits (104), Expect = 1e-05
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDMLTK 190
           G    +C  C KK+  +   K H++   G K ++C  CG  + R+++ + H A   M   
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63

Query: 191 E 191
           E
Sbjct: 64  E 64

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 44.7 bits (107), Expect = 2e-06
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITH 181
             H   + + C  C K++  +SD K H+ +  G K +KC  CG  FS+  + ITH
Sbjct: 22  LIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.7 bits (107), Expect = 3e-06
 Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 3/56 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
           R H G K +KC  C    A  S    H ++    + +KC  C            H 
Sbjct: 29  RCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHL 84

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 44.0 bits (105), Expect = 5e-06
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
                KC+ C K ++ +   K H +   G K YKC  C    +   S   H 
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-----CGTKEYKCN-CGAVFSRRDSFITH 181
           R H GEK + C  C K +  +     H K           + C+ CG  F+RR++   H
Sbjct: 8   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 44.0 bits (105), Expect = 6e-06
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
           R H  E+ + CD C K +  Q   + H  +    K +KC  CG  F +  +   H+
Sbjct: 38  RTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 93

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 43.6 bits (104), Expect = 9e-06
 Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHR 182
                +K++ C  C + +    +   H +     + Y C+ C   F R+D    HR
Sbjct: 10  LPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 18/97 (18%), Positives = 25/97 (25%), Gaps = 25/97 (25%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHN--LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRAL 118
           F C IC + F R  +L  H R H    P               + C    C      R  
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKP---------------FACDI--C-----GRKF 41

Query: 119 GDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAH 155
                 K+H            DK  +  +     +  
Sbjct: 42  ARSDERKRHR-DIQHILPILEDKVEELLSKNYHLENE 77

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 130 RKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAVFSRRDSFITHR 182
           ++          C K Y   S  KAH +   G K Y C+   CG  F+R D    H 
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 26/100 (26%)

Query: 63  CEICNKGFQRDQNLQLHRRGHN--LPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
              C K + +  +L+ H R H    P               Y C    C           
Sbjct: 10  YAGCGKTYTKSSHLKAHLRTHTGEKP---------------YHCDWDGC-----GWKFAR 49

Query: 121 LTGIKKHFCRKH-GEKKWKCDKCSKKYAVQSDY-KAHSKV 158
              + +H+ RKH G + ++C KC + ++ +SD+   H K 
Sbjct: 50  SDELTRHY-RKHTGHRPFQCQKCDRAFS-RSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 19/94 (20%)

Query: 98  KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH-GEKKWKCDK--CSKKYAVQSD--- 151
           +   + C    C      +     + +K H  R H GEK + CD   C  K+A +SD   
Sbjct: 2   RTATHTCDYAGC-----GKTYTKSSHLKAHL-RTHTGEKPYHCDWDGCGWKFA-RSDELT 54

Query: 152 --YKAHSKVCGTKEYKCN-CGAVFSRRDSFITHR 182
             Y+ H+   G + ++C  C   FSR D    H 
Sbjct: 55  RHYRKHT---GHRPFQCQKCDRAFSRSDHLALHM 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 4e-05
 Identities = 25/125 (20%), Positives = 34/125 (27%), Gaps = 52/125 (41%)

Query: 61  FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD 120
             CEIC K F+   +L  H+  H+                                    
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHS------------------------------------ 31

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV---CGTKEYKCN-CGAVFSRRD 176
                       GEK + C  C  ++  +     H +       K Y C  CG  FSR D
Sbjct: 32  ------------GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD 79

Query: 177 SFITH 181
               H
Sbjct: 80  HLNGH 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 15/51 (29%), Positives = 18/51 (35%), Gaps = 2/51 (3%)

Query: 133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITH 181
           G     C+ C K +        H     G K Y C  CG  F R+D    H
Sbjct: 4   GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH 54

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 41.3 bits (98), Expect = 6e-05
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITH 181
             H G + + C  C KK+ ++     H K+  G K Y+CN C   F  RDSF  H
Sbjct: 30  SMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 38.6 bits (91), Expect = 6e-04
 Identities = 24/128 (18%), Positives = 35/128 (27%), Gaps = 47/128 (36%)

Query: 63  CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLT 122
           C+ C K F        H   H                R Y C    C         G   
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGV--C---------G--- 44

Query: 123 GIKKHFCRKH----------GEKKWKCDKCSKKYAVQSDY--KAHSKVCGTKEYKCN-CG 169
              K F  KH          G K ++C+ C+K++  +  +     S    TK Y+     
Sbjct: 45  ---KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS---CTKSYEAAKAE 98

Query: 170 AVFSRRDS 177
              +    
Sbjct: 99  QNTTEASG 106

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 75

 Score = 40.4 bits (94), Expect = 7e-05
 Identities = 15/75 (20%), Positives = 22/75 (29%), Gaps = 3/75 (4%)

Query: 121 LTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFI 179
            +G   H   +   +   C  C  +       K H   CG +   C  CG     +D   
Sbjct: 2   SSGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVLVKD-LK 59

Query: 180 THRAFCDMLTKESAK 194
           TH   C       + 
Sbjct: 60  THPEVCGREGSGPSS 74

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KCD C K +  +S    HS V    K    + G
Sbjct: 5   SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 138 KCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITH 181
            C+ C++ +A Q   K H +     K Y C  C   F+RRD  I H
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KC++C K +  + D   H  V  G K    + G
Sbjct: 5   SSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 61 FVCEICNKGFQRDQNLQLHRRGH 83
          FVCE+C + F R ++L+ H R H
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSH 25

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KC++C K +   S   +H +   G K    + G
Sbjct: 5   SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 6e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KCD C K+++  S  + H +V  G K    + G
Sbjct: 5   SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSSG 46

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KC+KC K Y  + +   H KV  G +    + G
Sbjct: 5   SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG 46

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 7e-04
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 3/44 (6%)

Query: 133 GEKKWKCDKCSKKYAVQSDYKAHSKVCGTKE--YKCN-CGAVFS 173
             K + C  C K ++       H K   T E  +KC    +  S
Sbjct: 9   VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 11/42 (26%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK + C++C K +   S  + H ++  G K    + G
Sbjct: 5   SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSSG 46

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.3 bits (88), Expect = 8e-04
 Identities = 17/96 (17%), Positives = 25/96 (26%), Gaps = 23/96 (23%)

Query: 60  RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALG 119
            + C +CN           H R                 +   VCP  S     P     
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHERLC---------------RNAAVCPYCSLRFFSPE---- 56

Query: 120 DLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAH 155
               +K+    K   KK  C +C + +        H
Sbjct: 57  ----LKQEHESKCEYKKLTCLECMRTFKSSFSIWRH 88

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               G+K +KC++C K +   S    H  +  G K    + G
Sbjct: 5   SSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG 46

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 9e-04
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCNCG 169
               GEK +KC++C K +   S    H ++  G K    + G
Sbjct: 5   SSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	512
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.87
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.86
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.86
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.81
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.78
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.78
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.76
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.73
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.72
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.7
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.7
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.7
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.69
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.67
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.66
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.64
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.63
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.59
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.59
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.58
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.58
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.54
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.53
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.52
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.49
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.44
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.44
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.43
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.4
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.37
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.35
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.33
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.31
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.3
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.28
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.25
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.25
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.24
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.24
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.23
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.18
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.17
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.1
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.1
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.99
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.95
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.94
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.93
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.93
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.92
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.92
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.92
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.92
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.92
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.92
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.91
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.91
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.91
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.91
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.9
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.9
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.87
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.86
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.86
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.85
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.84
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.84
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.83
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.83
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.83
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.81
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.81
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.81
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.81
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.8
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.8
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.8
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.79
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.79
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.79
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.78
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.77
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.77
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.76
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.76
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.74
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.74
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.73
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.72
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.72
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.71
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.71
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.7
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.67
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.67
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.67
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.66
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.66
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.66
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.66
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.64
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.64
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.64
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.63
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.63
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.63
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.59
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.58
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.57
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.57
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.56
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.52
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.48
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.46
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.44
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.35
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.35
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.28
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.23
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.19
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.17
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.16
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.13
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.12
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.12
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.05
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.01
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.01
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.99
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.95
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.95
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.94
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.92
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.9
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.9
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.9
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.89
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.87
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.83
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.83
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.81
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.8
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.8
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.8
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.0
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.78
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.78
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.76
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.76
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.73
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.7
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.69
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.68
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.66
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.64
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.63
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.8
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.61
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.76
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.59
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.54
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.54
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.53
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.51
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.51
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.49
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.49
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.48
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.47
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.58
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.54
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.39
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.36
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.34
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.33
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.3
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.2
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.11
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.96
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.94
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	96.82
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.57
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.81
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.7
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.53
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.22
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	92.67
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.42
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	85.55
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	84.89
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	82.15
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.97

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.9e-22  Score=173.09  Aligned_cols=112  Identities=21%  Similarity=0.489  Sum_probs=105.2

Q ss_pred             CCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhh---cc
Q 010389           56 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCR---KH  132 (512)
Q Consensus        56 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~---H~  132 (512)
                      .++++|+|++|++.|.+...|++|++.|+             .+++|.|++|       ++.|.+...|.+|++.   |.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~   62 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHT-------------GEKPFECPKC-------GKCYFRKENLLEHEARNCMNR   62 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHS-------------SCCSCBCTTT-------CCBCSSHHHHHHHHHHCCCCS
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCC-------------CCCCeECCCC-------CchhcCHHHHHHHHhhhhcCC
Confidence            35679999999999999999999999998             7899999999       9999999999999996   56


Q ss_pred             CCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcC
Q 010389          133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       133 gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      ++++|.|.+|++.|.....|++|+++ +++++|+|. |++.|.+...|.+|++.+|.
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~  119 (124)
T 2dlq_A           63 SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS  119 (124)
T ss_dssp             CCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSS
T ss_pred             CCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCC
Confidence            89999999999999999999999999 788999999 99999999999999987764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.87  E-value=9.1e-23  Score=191.26  Aligned_cols=149  Identities=27%  Similarity=0.551  Sum_probs=95.0

Q ss_pred             CCCCCCCCCCCCchhhhhcCccccCCCCCeeccccCcccCChHHHHHHHHhcCC--Cchhh-------------cccccc
Q 010389           32 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL--PWKLR-------------QRSNKE   96 (512)
Q Consensus        32 kkk~~~~~~~~~~~~~~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~--p~~~~-------------~~~~~~   96 (512)
                      .-++..++........+..+.+.|.++++|+|++|++.|.+...|++|++.|+.  ++.|.             .+...+
T Consensus        21 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  100 (190)
T 2i13_A           21 PYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTH  100 (190)
T ss_dssp             ----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHH
T ss_pred             CCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHhc
Confidence            345667777788888888899999999999999999999999999999999972  22221             112223


Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR  174 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~  174 (512)
                      .++++|.|++|       ++.|.+...|.+|+++|+++++|.|.+|++.|.....|+.|+++ +++++|+|. |++.|.+
T Consensus       101 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~  173 (190)
T 2i13_A          101 TGEKPYACPEC-------GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSR  173 (190)
T ss_dssp             HTCCCEECTTT-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CCCCCCcCCCC-------CCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCC
Confidence            34556666666       66666666666666666666666676677766666666666666 566667776 7777776


Q ss_pred             hhHHHHHHHHhcC
Q 010389          175 RDSFITHRAFCDM  187 (512)
Q Consensus       175 ~~~L~~H~~~hh~  187 (512)
                      +..|.+|++.|+.
T Consensus       174 ~~~L~~H~~~H~~  186 (190)
T 2i13_A          174 RDALNVHQRTHTG  186 (190)
T ss_dssp             HHHHHHHHTTC--
T ss_pred             HHHHHHHHHhcCC
Confidence            6667666666653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.86  E-value=3.5e-22  Score=172.29  Aligned_cols=110  Identities=28%  Similarity=0.671  Sum_probs=104.2

Q ss_pred             CCCCCeeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCC--CCCCCCCCCCCccCChhhHHhhhhhc
Q 010389           56 LATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus        56 ~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      .++++|.|.+  |++.|.+...|++|++.|.             ++++|.|+  .|       ++.|.+...|++|+++|
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h   61 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHT-------------GEKPYQCDFKDC-------ERRFSRSDQLKRHQRRH   61 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhC-------------CCCCccCCCCCC-------cCccCCHHHHHHHHHHc
Confidence            3568999997  9999999999999999997             78999999  57       99999999999999999


Q ss_pred             cCCccccccCCCCcccChHHHhhhhhh-cCCcceec--c-CCCccCChhHHHHHHHHh
Q 010389          132 HGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC--N-CGAVFSRRDSFITHRAFC  185 (512)
Q Consensus       132 ~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C--~-Cgk~F~~~~~L~~H~~~h  185 (512)
                      +++++|.|.+|++.|.....|++|+++ +++++|+|  . |++.|.+...|.+|++.|
T Consensus        62 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999999 78999999  7 999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.86  E-value=5.3e-22  Score=186.04  Aligned_cols=133  Identities=28%  Similarity=0.584  Sum_probs=91.8

Q ss_pred             cCccccCCCCCeeccccCcccCChHHHHHHHHhcCC--Cchhh-------------cccccccCCcceeCCCCCCCCCCC
Q 010389           50 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNL--PWKLR-------------QRSNKEVKKRVYVCPEKSCVHHDP  114 (512)
Q Consensus        50 ~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~--p~~~~-------------~~~~~~~~~k~~~C~~C~C~~~~~  114 (512)
                      .+...+.++++|.|++|++.|.+...|..|++.|+.  ++.|.             .+...+.++++|.|++|       
T Consensus        11 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C-------   83 (190)
T 2i13_A           11 AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC-------   83 (190)
T ss_dssp             --------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTT-------
T ss_pred             hhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCccc-------
Confidence            345567778999999999999999999999999972  33322             22233456677888887       


Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcCcc
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDMLT  189 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~  189 (512)
                      ++.|.+...|+.|+++|+++++|.|.+|++.|.....|+.|+++ +++++|+|. |++.|.+...|.+|++.|+...
T Consensus        84 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           84 GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             CCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             CCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            89999999999999999999999999999999999999999988 788899999 9999999999999998887543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.85  E-value=3.2e-22  Score=178.75  Aligned_cols=107  Identities=19%  Similarity=0.338  Sum_probs=98.4

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhh
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCR  130 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~  130 (512)
                      +...+.++++|+|++|++.|.+...|++|+++|.             ++++|.|++|       ++.|.....|.+|+++
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~   72 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHS-------------WEKKYPCRYC-------EKVFPLAEYRTKHEIH   72 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHH-------------CCSCEECSSS-------SCEESSHHHHHHHHHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcC-------------CCCCeeCCcc-------Ceecccccchhhhccc
Confidence            3456778999999999999999999999999997             8899999999       9999999999999999


Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh-cCC------cceecc-CCCccCChhH
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT------KEYKCN-CGAVFSRRDS  177 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~------kpy~C~-Cgk~F~~~~~  177 (512)
                      |+++++|.|.+|++.|.....|+.|+++ |++      ++|+|. |++.|.+...
T Consensus        73 H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           73 HTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             HHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             cCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence            9999999999999999999999999999 765      459999 9999987543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.84  E-value=4.4e-21  Score=166.99  Aligned_cols=111  Identities=24%  Similarity=0.559  Sum_probs=101.5

Q ss_pred             CCCCeecc--ccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           57 ATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        57 ~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +.++|.|+  .|++.|.+...|++|+++|              +.++|.|++|       ++.|.+...|.+|+++|+++
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h--------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   60 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH--------------GPRVHVCAEC-------GKAFVESSKLKRHQLVHTGE   60 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG--------------SCCCEECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc--------------CCCCeECCCC-------CchhCCHHHHHHHHHHcCCC
Confidence            45789999  8999999999999999988              4678999999       99999999999999999999


Q ss_pred             ccccccC--CCCcccChHHHhhhhhh-cCCcceec--c-CCCccCChhHHHHHHHHhcCc
Q 010389          135 KKWKCDK--CSKKYAVQSDYKAHSKV-CGTKEYKC--N-CGAVFSRRDSFITHRAFCDML  188 (512)
Q Consensus       135 kp~~C~~--C~k~F~~~~~L~~H~~~-h~~kpy~C--~-Cgk~F~~~~~L~~H~~~hh~~  188 (512)
                      ++|.|.+  |++.|.....|++|+++ +++++|.|  + |++.|.+...|.+|++.|+..
T Consensus        61 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            9999986  99999999999999999 78999999  5 999999999999999998753

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.81  E-value=2.4e-20  Score=174.65  Aligned_cols=141  Identities=20%  Similarity=0.315  Sum_probs=113.2

Q ss_pred             CCCCCCCCC--CCCCCCCCchhhhhcCccccCCCCCeec--cccCcccCChHHHHHHHHhcCCCchhhcccccccCCcce
Q 010389           27 PKSTNKKKR--SLPGTPDPDAEVIALSPKTLLATNRFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVY  102 (512)
Q Consensus        27 pk~~~kkk~--~~~~~~~~~~~~~~~~~~~~~~~k~f~C--~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~  102 (512)
                      +...+.-++  ...+........+..+.+.|.++++|.|  ++|++.|.+...|++|+++|+             ++++|
T Consensus         7 ~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~   73 (190)
T 1tf6_A            7 PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHT-------------GEKNF   73 (190)
T ss_dssp             ---CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTT-------------TCCCE
T ss_pred             cCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHcc-------------CCCce
Confidence            333444455  4677888888888888889999999999  889999999999999999997             67888


Q ss_pred             eCC--CCCCCCCCCCCccCChhhHHhhh-hhc-cCCccccc--cCCCCcccChHHHhhhhhh-cCCcceec--c-CCCcc
Q 010389          103 VCP--EKSCVHHDPTRALGDLTGIKKHF-CRK-HGEKKWKC--DKCSKKYAVQSDYKAHSKV-CGTKEYKC--N-CGAVF  172 (512)
Q Consensus       103 ~C~--~C~C~~~~~~k~F~~~~~Lk~H~-~~H-~gekp~~C--~~C~k~F~~~~~L~~H~~~-h~~kpy~C--~-Cgk~F  172 (512)
                      .|+  .|       ++.|.+...|++|+ +.| .++++|.|  .+|++.|.....|+.|+++ +++++|.|  . |++.|
T Consensus        74 ~C~~~~C-------~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F  146 (190)
T 1tf6_A           74 TCDSDGC-------DLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF  146 (190)
T ss_dssp             ECCSSSC-------CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBC
T ss_pred             eCCCCCC-------CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchh
Confidence            888  66       88888888888888 455 35778888  7788888888888888888 67788888  3 88888


Q ss_pred             CChhHHHHHHHHhcC
Q 010389          173 SRRDSFITHRAFCDM  187 (512)
Q Consensus       173 ~~~~~L~~H~~~hh~  187 (512)
                      .+...|.+|++.|+.
T Consensus       147 ~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          147 SLPSRLKRHEKVHAG  161 (190)
T ss_dssp             SSHHHHHHHHTSSCS
T ss_pred             cCHHHHHHHHHHhCC
Confidence            888888888887765

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.8e-20  Score=167.99  Aligned_cols=131  Identities=22%  Similarity=0.369  Sum_probs=107.5

Q ss_pred             CCCCCCCchhhhhcCcc---ccCCCCCeecccc-----CcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC--
Q 010389           37 LPGTPDPDAEVIALSPK---TLLATNRFVCEIC-----NKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--  106 (512)
Q Consensus        37 ~~~~~~~~~~~~~~~~~---~~~~~k~f~C~~C-----gk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~--  106 (512)
                      ..+........+..+.+   .+.++++|+|++|     ++.|.+...|++|++.|+             ++++|.|++  
T Consensus         8 ~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~   74 (155)
T 2gli_A            8 GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT-------------GEKPHKCTFEG   74 (155)
T ss_dssp             TCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH-------------CCCCCCCCSTT
T ss_pred             CCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcC-------------CCCCccCCCCC
Confidence            34455555666666665   5777788887753     388888888888888887             778899986  


Q ss_pred             CCCCCCCCCCccCChhhHHhhhhhccCCccccccC--CCCcccChHHHhhhh-hh-cCCcceecc---CCCccCChhHHH
Q 010389          107 KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHS-KV-CGTKEYKCN---CGAVFSRRDSFI  179 (512)
Q Consensus       107 C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~-~~-h~~kpy~C~---Cgk~F~~~~~L~  179 (512)
                      |       ++.|.+...|++|+++|+++++|.|.+  |++.|.....|++|+ ++ .++++|.|.   |++.|.+...|.
T Consensus        75 C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~  147 (155)
T 2gli_A           75 C-------RKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLR  147 (155)
T ss_dssp             C-------CCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHH
T ss_pred             C-------CCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHH
Confidence            6       999999999999999999999999998  999999999999998 56 567889995   999999999999


Q ss_pred             HHHHHhcC
Q 010389          180 THRAFCDM  187 (512)
Q Consensus       180 ~H~~~hh~  187 (512)
                      +|++.||.
T Consensus       148 ~H~~~hhg  155 (155)
T 2gli_A          148 KHVKTVHG  155 (155)
T ss_dssp             HHHHHSCC
T ss_pred             HHHHhhcC
Confidence            99988873

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=4.8e-20  Score=166.85  Aligned_cols=120  Identities=20%  Similarity=0.337  Sum_probs=101.9

Q ss_pred             CCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcc
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKK  136 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp  136 (512)
                      ++..|.|.+|++.|.+..+|++|++.++....    .........|.|++|       ++.|.+...|.+|+++|+++++
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~----~~~~~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   90 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGP----EQNNHVCYWEECPRE-------GKSFKAKYKLVNHIRVHTGEKP   90 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCT----TCSSCCCCBTTCTTS-------SCCCSSHHHHHHHTHHHHCCCS
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCc----ccCCccccccCCCCc-------ccccCCHHHHHHHHHhcCCCCc
Confidence            45689999999999999999999998441100    000001123788888       9999999999999999999999


Q ss_pred             ccccC--CCCcccChHHHhhhhhh-cCCcceecc---CCCccCChhHHHHHHHHhcC
Q 010389          137 WKCDK--CSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       137 ~~C~~--C~k~F~~~~~L~~H~~~-h~~kpy~C~---Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      |.|.+  |++.|.....|++|+++ +++++|.|.   |++.|.+...|.+|++.|+.
T Consensus        91 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A           91 FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             EECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             ccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            99998  99999999999999999 788999998   99999999999999998875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=2.6e-19  Score=161.61  Aligned_cols=118  Identities=24%  Similarity=0.448  Sum_probs=103.8

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      +.+|.|++|++.|.++..|++|++.++          .+.++++|.|++|+|  ..|++.|.+...|++|+++|+++++|
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h----------~h~~~~~~~C~~c~C--~~c~~~f~~~~~l~~H~~~h~~~~~~   68 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEH----------IHGERKEFVCHWGGC--SRELRPFKAQYMLVVHMRRHTGEKPH   68 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHT----------SSSCSSCCCCCBTTC--TTTTCCCSSHHHHHHHTHHHHCCCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhc----------cCCCCcceeCCCCCc--cchhhhhhhHHHHHHHHHhcCCCCCc
Confidence            357999999999999999999998422          112789999998865  45579999999999999999999999


Q ss_pred             cccC--CCCcccChHHHhhhhhh-cCCcceecc---CCCccCChhHHHHHH-HHhcC
Q 010389          138 KCDK--CSKKYAVQSDYKAHSKV-CGTKEYKCN---CGAVFSRRDSFITHR-AFCDM  187 (512)
Q Consensus       138 ~C~~--C~k~F~~~~~L~~H~~~-h~~kpy~C~---Cgk~F~~~~~L~~H~-~~hh~  187 (512)
                      .|.+  |++.|.....|++|+++ +++++|.|.   |++.|.+...|.+|+ +.|..
T Consensus        69 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~  125 (155)
T 2gli_A           69 KCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN  125 (155)
T ss_dssp             CCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             cCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            9986  99999999999999999 688999998   999999999999998 55544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.78  E-value=6e-19  Score=165.14  Aligned_cols=131  Identities=25%  Similarity=0.440  Sum_probs=118.3

Q ss_pred             CCCCCCCCchhhhhcCccccCCCCCeecc--ccCcccCChHHHHHHH-HhcCCCchhhcccccccCCcceeC--CCCCCC
Q 010389           36 SLPGTPDPDAEVIALSPKTLLATNRFVCE--ICNKGFQRDQNLQLHR-RGHNLPWKLRQRSNKEVKKRVYVC--PEKSCV  110 (512)
Q Consensus        36 ~~~~~~~~~~~~~~~~~~~~~~~k~f~C~--~Cgk~F~~~~~L~~H~-r~H~~p~~~~~~~~~~~~~k~~~C--~~C~C~  110 (512)
                      ...+........+..+.+.|.++++|.|.  +|++.|.++.+|++|+ +.|.            ..+++|.|  ++|   
T Consensus        48 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~------------~~~~~~~C~~~~C---  112 (190)
T 1tf6_A           48 EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHN------------IKICVYVCHFENC---  112 (190)
T ss_dssp             TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSS------------TTTSCCEECSSSS---
T ss_pred             CCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcC------------CCcceeeCCCCCC---
Confidence            56778888888889999999999999999  8999999999999999 5553            25789999  888   


Q ss_pred             CCCCCCccCChhhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhhcCCcceecc----CCCccCChhHHHHHHHH
Q 010389          111 HHDPTRALGDLTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKVCGTKEYKCN----CGAVFSRRDSFITHRAF  184 (512)
Q Consensus       111 ~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~h~~kpy~C~----Cgk~F~~~~~L~~H~~~  184 (512)
                          ++.|.+...|++|+++|+++++|.|.+  |++.|.....|++|+++|..  |.|.    |++.|.+...|.+|++.
T Consensus       113 ----~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~~~~l~~H~~~  186 (190)
T 1tf6_A          113 ----GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAE  186 (190)
T ss_dssp             ----CEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSCHHHHHHHHTT
T ss_pred             ----ccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCccccHHHHHHHHHh
Confidence                999999999999999999999999988  99999999999999999654  8885    99999999999999998


Q ss_pred             hcC
Q 010389          185 CDM  187 (512)
Q Consensus       185 hh~  187 (512)
                      |+.
T Consensus       187 h~~  189 (190)
T 1tf6_A          187 CHQ  189 (190)
T ss_dssp             CC-
T ss_pred             hcC
Confidence            874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.76  E-value=1.9e-18  Score=146.25  Aligned_cols=90  Identities=24%  Similarity=0.553  Sum_probs=84.3

Q ss_pred             CCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcc
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKK  136 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp  136 (512)
                      .+++|.|.+|++.|.+...|.+|++.|+             .+++|.|++|       ++.|.....|++|+++|+++++
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~   73 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHT-------------DERPYTCDIC-------HKAFRRQDHLRDHRYIHSKEKP   73 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHC-------------CSCCCBCSSS-------CCBCSCHHHHHHHGGGSCCCCT
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcC-------------CCCCcCCCCc-------cchhCCHHHHHHHHHHhCCCCC
Confidence            4578999999999999999999999998             7899999999       9999999999999999999999


Q ss_pred             ccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      |+|.+|++.|.....|++|+++ +++++|.+
T Consensus        74 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           74 FKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             TSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             eECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999999999999999999 67788764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=4.2e-18  Score=141.27  Aligned_cols=89  Identities=26%  Similarity=0.470  Sum_probs=79.1

Q ss_pred             CCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           56 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        56 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ..+++|+|.+|++.|.+...|++|++.|+             .+++|.|++|       ++.|.....|++|+++|++++
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   63 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHT-------------GVKPYKCKTC-------DYAAADSSSLNKHLRIHSDER   63 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCC-------------CCCSEECSSS-------CCEESSHHHHHHHHHHSCCCC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999997             7789999998       999999999999999999999


Q ss_pred             cccccCCCCcccChHHHhhhhhh-cCCcce
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      +|.|.+|++.|.....|.+|+++ ++++..
T Consensus        64 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           64 PFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999988 555543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.73  E-value=7.4e-18  Score=152.38  Aligned_cols=118  Identities=20%  Similarity=0.292  Sum_probs=105.3

Q ss_pred             CCCCCCCCCCCCCCchhhhhcCccc-cCCCCC--------eeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCc
Q 010389           30 TNKKKRSLPGTPDPDAEVIALSPKT-LLATNR--------FVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKR  100 (512)
Q Consensus        30 ~~kkk~~~~~~~~~~~~~~~~~~~~-~~~~k~--------f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k  100 (512)
                      ...-++..++........+..|.+. |...++        |.|.+|++.|.++..|++|+++|+             +++
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~   89 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT-------------GEK   89 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHH-------------CCC
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcC-------------CCC
Confidence            3445667778888888888888776 666554        899999999999999999999998             889


Q ss_pred             ceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhh-cCCcceecc
Q 010389          101 VYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       101 ~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|.|++  |       ++.|.....|++|+++|+++++|.|.+  |++.|.....|++|+++ +++++|.|.
T Consensus        90 ~~~C~~~~C-------~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           90 PFPCPFPGC-------GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             SEECSCTTT-------CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             cccCCcCCC-------CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            999998  8       999999999999999999999999998  99999999999999999 789999984

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.73  E-value=1.7e-18  Score=154.54  Aligned_cols=85  Identities=25%  Similarity=0.452  Sum_probs=81.7

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR  174 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~  174 (512)
                      .++++|+|++|       ++.|.....|++|+++|+++++|.|.+|++.|.....|.+|+++ .++++|.|. |++.|.+
T Consensus        18 ~Gek~y~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~   90 (133)
T 2lt7_A           18 DGRVYYICIVC-------KRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFIN   90 (133)
T ss_dssp             TTEEEEEETTT-------CCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESS
T ss_pred             CCCcCeECCCC-------CCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCC
Confidence            48999999999       99999999999999999999999999999999999999999999 689999999 9999999


Q ss_pred             hhHHHHHHHHhcCc
Q 010389          175 RDSFITHRAFCDML  188 (512)
Q Consensus       175 ~~~L~~H~~~hh~~  188 (512)
                      ...|..|++.||..
T Consensus        91 ~~~L~~H~~~hh~~  104 (133)
T 2lt7_A           91 YQFMSSHIKSVHSQ  104 (133)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHhHHhcCC
Confidence            99999999999853

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.72  E-value=6.5e-18  Score=143.58  Aligned_cols=94  Identities=17%  Similarity=0.217  Sum_probs=85.1

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhh
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCR  130 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~  130 (512)
                      ..+.+.++++|+|.+|++.|.....|++|+++|.               ++|.|++|       ++.|.....|++|++ 
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~---------------~~~~C~~C-------~~~f~~~~~l~~H~~-   63 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR---------------NAAVCPYC-------SLRFFSPELKQEHES-   63 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH---------------HSBCCTTT-------CCCBSSHHHHHHHHH-
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC---------------CCccCCCC-------CCccCCHHHHHHHHH-
Confidence            3456778899999999999999999999999984               58999999       999999999999995 


Q ss_pred             ccCCccccccCCCCcccChHHHhhhhh-h-cCCcceecc
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSK-V-CGTKEYKCN  167 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~-~-h~~kpy~C~  167 (512)
                      |+++++|.|.+|++.|.....|++|++ + .++++|.|.
T Consensus        64 H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           64 KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            999999999999999999999999998 5 467888874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=1.3e-17  Score=143.36  Aligned_cols=97  Identities=13%  Similarity=0.221  Sum_probs=77.9

Q ss_pred             hhcCccccCCCCCeeccccCcccCChHHHHHHHHh--cCCCchhhcccccccCCcc-eeCCCCCCCCCCCCCcc--CChh
Q 010389           48 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRG--HNLPWKLRQRSNKEVKKRV-YVCPEKSCVHHDPTRAL--GDLT  122 (512)
Q Consensus        48 ~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~--H~~p~~~~~~~~~~~~~k~-~~C~~C~C~~~~~~k~F--~~~~  122 (512)
                      +..+.+.|.++++|+|++|++.|.++.+|++|++.  |.             ..++ +.|++|       ++.|  ....
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~-------------~~~~~~~C~~C-------~~~f~f~~~~   66 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHY-------------RDDNHETDNNN-------PKRWSKPRKR   66 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCC-------------BCSCCCCCCCC-------CSCCSSCCCC
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCcc-------------ccCCCccCCCC-------CcccccccHH
Confidence            45566778888899999999999999999999988  54             4444 448888       7777  8888


Q ss_pred             hHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcce
Q 010389          123 GIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus       123 ~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      .|++|+++|+++++|.|.+|++.|.....|++|+++ |.....
T Consensus        67 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~  109 (115)
T 2dmi_A           67 SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV  109 (115)
T ss_dssp             CCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCS
T ss_pred             HHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccC
Confidence            889998888888889999999998888888888888 544443

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.6e-17  Score=136.16  Aligned_cols=85  Identities=24%  Similarity=0.475  Sum_probs=73.9

Q ss_pred             CCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC-
Q 010389           56 LATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE-  134 (512)
Q Consensus        56 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge-  134 (512)
                      .++++|+|.+|++.|.+...|.+|++.|+             .+++|.|++|       ++.|.....|.+|+++|+++ 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   62 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSV   62 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSC-------------SSCSEECSSS-------CCEESCHHHHHHHHHHHCCCC
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcC-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCC
Confidence            35678999999999999999999999887             7788999988       89999999999999999886 


Q ss_pred             -ccccccCCCCcccChHHHhhhhhh-cC
Q 010389          135 -KKWKCDKCSKKYAVQSDYKAHSKV-CG  160 (512)
Q Consensus       135 -kp~~C~~C~k~F~~~~~L~~H~~~-h~  160 (512)
                       ++|.|.+|++.|.....|++|++. |.
T Consensus        63 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           63 GKPYICQSCGKGFSRPDHLNGHIKQVHS   90 (95)
T ss_dssp             CSSBCCSSSCCCBSSHHHHHHHHHHTSC
T ss_pred             CCceECCCccchhCCHHHHHHHHHHhcC
Confidence             889999999999999999999864 64

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.4e-17  Score=142.64  Aligned_cols=113  Identities=17%  Similarity=0.317  Sum_probs=101.3

Q ss_pred             CCCCCCCCCCCCchhhhhcCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCC
Q 010389           32 KKKRSLPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVH  111 (512)
Q Consensus        32 kkk~~~~~~~~~~~~~~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~  111 (512)
                      .-++..++........+..+.+.|..+++|.|++|++.|.++..|.+|++.|+          .+..+++|.|++|    
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~----------~~~~~~~~~C~~C----   72 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNC----------MNRSEQVFTCSVC----   72 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCC----------CCSCCCCEECSSS----
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhh----------cCCCCCCeECCCC----
Confidence            34566777888888888899999999999999999999999999999999763          1237789999999    


Q ss_pred             CCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCC
Q 010389          112 HDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       112 ~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~  161 (512)
                         ++.|.+...|++|+++|+++++|.|.+|++.|.....|++|++. |..
T Consensus        73 ---~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           73 ---QETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             ---CCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             ---CCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence               99999999999999999999999999999999999999999986 643

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.5e-17  Score=141.69  Aligned_cols=83  Identities=19%  Similarity=0.384  Sum_probs=48.6

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      |.++++|.| +|++.|.+...|++|++.|+             .+++|.|++|       ++.|.....|++|+++|+++
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   63 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIHTGI   63 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTTCCC
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcC-------------CCcCccCCCC-------CcccCCHHHHHHHHHHcCCC
Confidence            445566666 66666666666666666665             4555666555       55555555566665555555


Q ss_pred             ccccccCCCCcccChHHHhhhhhh
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ++|.|.+|++.|.....|++|+++
T Consensus        64 ~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A           64 KPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCeeCCCCcchhcCHHHHHHHHHH
Confidence            555555555555555555555444

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.70  E-value=1.7e-17  Score=135.74  Aligned_cols=85  Identities=26%  Similarity=0.560  Sum_probs=72.0

Q ss_pred             CCCeecc--ccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           58 TNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        58 ~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +++|.|+  .|++.|.+...|.+|+++|.             .+++|.|++|       ++.|.....|+.|+++|++++
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   61 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEK   61 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHHHHHCCC
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHcCCCC
Confidence            5689997  59999999999999999887             7788999988       889999999999999998889


Q ss_pred             cccccCCCCcccChHHHhhhhhh-cCCc
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV-CGTK  162 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~-h~~k  162 (512)
                      +|.|.+|++.|.....|++|+++ ++++
T Consensus        62 ~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           62 PFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            99999999999999999999888 4443

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.69  E-value=2.1e-17  Score=132.59  Aligned_cols=80  Identities=33%  Similarity=0.587  Sum_probs=64.7

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      +|.|.+|++.|.+...|.+|++.|.             .+++|.|++|       ++.|.....|.+|+++|+++++|.|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C   60 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHS-------------DTRPYPCQYC-------GKRFHQKSDMKKHTFIHTGEKPHKC   60 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH-------------TCCCEECSSS-------CCEESSHHHHHHHHHHHHTCCCEEC
T ss_pred             CccCCCCcccccCchhHHHHHHHcC-------------CCCCeeCCcC-------ChhhCCHHHHHHHHHHhcCCCCCcC
Confidence            4788888888888888888888876             6777888887       8888888888888888888888888


Q ss_pred             cCCCCcccChHHHhhhhhhc
Q 010389          140 DKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       140 ~~C~k~F~~~~~L~~H~~~h  159 (512)
                      .+|++.|.....|++|+++|
T Consensus        61 ~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A           61 QVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             TTTSCEESSHHHHHHHHHHH
T ss_pred             CCcchhhCChHHHHHHHHhh
Confidence            88888888888888887763

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=6.3e-18  Score=145.28  Aligned_cols=97  Identities=13%  Similarity=0.195  Sum_probs=87.8

Q ss_pred             hHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhh--ccCCcccc-ccCCCCcc--c
Q 010389           73 DQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCR--KHGEKKWK-CDKCSKKY--A  147 (512)
Q Consensus        73 ~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~--H~gekp~~-C~~C~k~F--~  147 (512)
                      ...|++|+++|+             ++++|.|++|       ++.|.....|++|+++  |.++++|. |.+|++.|  .
T Consensus         4 ~~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~   63 (115)
T 2dmi_A            4 GSSGKLYGSIFT-------------GASKFRCKDC-------SAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKP   63 (115)
T ss_dssp             CCCCCCCCCCCC-------------CCCSEEBSSS-------SCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSC
T ss_pred             chhhhhheeeeC-------------CCCCEECCcc-------CchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccc
Confidence            346788888887             8899999999       9999999999999999  88888765 99999999  8


Q ss_pred             ChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhcCcc
Q 010389          148 VQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCDMLT  189 (512)
Q Consensus       148 ~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~  189 (512)
                      ....|++|+++ +++++|.|. |++.|.+...|.+|++.||...
T Consensus        64 ~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           64 RKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             CCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             cHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence            99999999999 678999999 9999999999999999988543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.67  E-value=4.1e-17  Score=141.70  Aligned_cols=107  Identities=20%  Similarity=0.327  Sum_probs=92.5

Q ss_pred             CCCCCCCchhhhhcCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC--CCCCCCCC
Q 010389           37 LPGTPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDP  114 (512)
Q Consensus        37 ~~~~~~~~~~~~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~  114 (512)
                      .++........+..+.+.| ..++|.|.+|++.|.+...|.+|++.|+             ++++|.|++  |       
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------   70 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHT-------------GEKPFQCTFEGC-------   70 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTS-------------CCCCEECCSTTC-------
T ss_pred             CCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcC-------------CCCCeeCCCCCC-------
Confidence            4556666667777788888 7889999999999999999999999998             889999986  7       


Q ss_pred             CCccCChhhHHhhhhhccCCcccccc--CCCCcccChHHHhhhhhh-cCCcce
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCD--KCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      ++.|.....|.+|+++|+++++|.|.  .|++.|.....|.+|+++ ++++++
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           71 GKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             cCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999999999999999996  499999999999999999 666765

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.67  E-value=5.5e-17  Score=139.52  Aligned_cols=102  Identities=21%  Similarity=0.444  Sum_probs=95.4

Q ss_pred             CCCCCCchhhhhcCccccCCCCCeecc--ccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCC
Q 010389           38 PGTPDPDAEVIALSPKTLLATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPT  115 (512)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~  115 (512)
                      .+........+..+.+.|.++++|.|+  .|++.|.+...|.+|++.|+             ++++|.|++|       +
T Consensus        14 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~   73 (119)
T 2jp9_A           14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHT-------------GVKPFQCKTC-------Q   73 (119)
T ss_dssp             SCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------C
T ss_pred             CcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcC-------------CCCCccCCcc-------C
Confidence            667777778888888899999999999  79999999999999999997             8899999999       9


Q ss_pred             CccCChhhHHhhhhhccCCccccc--cCCCCcccChHHHhhhhhhc
Q 010389          116 RALGDLTGIKKHFCRKHGEKKWKC--DKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       116 k~F~~~~~Lk~H~~~H~gekp~~C--~~C~k~F~~~~~L~~H~~~h  159 (512)
                      +.|.+...|++|+++|+++++|.|  .+|++.|.....|++|+++|
T Consensus        74 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             chhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            999999999999999999999999  89999999999999999864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.66  E-value=8.7e-17  Score=133.25  Aligned_cols=84  Identities=18%  Similarity=0.315  Sum_probs=80.3

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR  174 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~  174 (512)
                      ..+++|.|++|       ++.|.+...|.+|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |++.|.+
T Consensus         4 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   76 (96)
T 2dmd_A            4 GSSGPHKCEVC-------GKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRN   76 (96)
T ss_dssp             CCCCCCCBTTT-------TBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESS
T ss_pred             CCCcCeECCCC-------CCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            36789999999       99999999999999999999999999999999999999999999 788999999 9999999


Q ss_pred             hhHHHHHHHHhcC
Q 010389          175 RDSFITHRAFCDM  187 (512)
Q Consensus       175 ~~~L~~H~~~hh~  187 (512)
                      ...|.+|++.|+.
T Consensus        77 ~~~l~~H~~~h~~   89 (96)
T 2dmd_A           77 SSQLTVHLRSHTG   89 (96)
T ss_dssp             HHHHHHHHTTCCS
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.66  E-value=1.5e-16  Score=134.36  Aligned_cols=85  Identities=21%  Similarity=0.469  Sum_probs=80.6

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR  174 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~  174 (512)
                      ..+++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |++.|.+
T Consensus        13 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   85 (106)
T 2ee8_A           13 KTKKEFICKFC-------GRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQ   85 (106)
T ss_dssp             CCCCCCBCSSS-------CCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSS
T ss_pred             CCCcCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccC
Confidence            46789999999       99999999999999999999999999999999999999999999 788999999 9999999


Q ss_pred             hhHHHHHHHHhcCc
Q 010389          175 RDSFITHRAFCDML  188 (512)
Q Consensus       175 ~~~L~~H~~~hh~~  188 (512)
                      ...|.+|++.|+..
T Consensus        86 ~~~L~~H~~~H~~~   99 (106)
T 2ee8_A           86 SRTLAVHKTLHMQT   99 (106)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            99999999998753

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=1e-16  Score=128.54  Aligned_cols=79  Identities=25%  Similarity=0.554  Sum_probs=76.3

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHH
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSF  178 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L  178 (512)
                      +|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.|. |++.|.+...|
T Consensus         1 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   73 (82)
T 2kmk_A            1 SFDCKIC-------GKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNL   73 (82)
T ss_dssp             CEECSSS-------CCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHH
T ss_pred             CccCCCC-------cccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHH
Confidence            5899999       99999999999999999999999999999999999999999999 789999999 99999999999


Q ss_pred             HHHHHHhc
Q 010389          179 ITHRAFCD  186 (512)
Q Consensus       179 ~~H~~~hh  186 (512)
                      .+|++.|+
T Consensus        74 ~~H~~~H~   81 (82)
T 2kmk_A           74 ITHSRKHT   81 (82)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhhC
Confidence            99999986

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.2e-16  Score=136.01  Aligned_cols=88  Identities=26%  Similarity=0.582  Sum_probs=82.0

Q ss_pred             ccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccC
Q 010389           96 EVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFS  173 (512)
Q Consensus        96 ~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~  173 (512)
                      +.++++|.| +|       ++.|.+...|++|++.|+++++|.|.+|++.|.....|++|+++ +++++|+|. |++.|.
T Consensus         5 h~~~k~~~C-~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   76 (110)
T 2csh_A            5 SSGDKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFM   76 (110)
T ss_dssp             CCCCCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEES
T ss_pred             CCCCCCEec-cC-------CCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhc
Confidence            348899999 88       99999999999999999999999999999999999999999999 788999999 999999


Q ss_pred             ChhHHHHHHHHhcCcchh
Q 010389          174 RRDSFITHRAFCDMLTKE  191 (512)
Q Consensus       174 ~~~~L~~H~~~hh~~~~~  191 (512)
                      +...|.+|++.|+.....
T Consensus        77 ~~~~l~~H~~~~~~~~~~   94 (110)
T 2csh_A           77 WRDSFHRHVTSCTKSYEA   94 (110)
T ss_dssp             CHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccccccc
Confidence            999999999999864433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.64  E-value=1.5e-16  Score=130.04  Aligned_cols=82  Identities=24%  Similarity=0.599  Sum_probs=77.6

Q ss_pred             CcceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCC
Q 010389           99 KRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSR  174 (512)
Q Consensus        99 ~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~  174 (512)
                      +++|.|+  .|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|+.|+++ +++++|.|. |++.|.+
T Consensus         2 ~k~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   74 (90)
T 1a1h_A            2 ERPYACPVESC-------DRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFAR   74 (90)
T ss_dssp             -CCEECCSSSC-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESS
T ss_pred             CCceECCCCCC-------CCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCC
Confidence            5789998  47       99999999999999999999999999999999999999999999 789999999 9999999


Q ss_pred             hhHHHHHHHHhcC
Q 010389          175 RDSFITHRAFCDM  187 (512)
Q Consensus       175 ~~~L~~H~~~hh~  187 (512)
                      ...|.+|++.|+.
T Consensus        75 ~~~l~~H~~~H~~   87 (90)
T 1a1h_A           75 SDERKRHTKIHLR   87 (90)
T ss_dssp             HHHHHHHHGGGGC
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999999875

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=2.6e-16  Score=130.11  Aligned_cols=84  Identities=24%  Similarity=0.454  Sum_probs=78.2

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCC--cceecc-CCCcc
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT--KEYKCN-CGAVF  172 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~--kpy~C~-Cgk~F  172 (512)
                      .++++|.|++|       ++.|.+...|.+|+++|+++++|.|.+|++.|.....|.+|+++ +++  ++|+|. |++.|
T Consensus         3 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f   75 (95)
T 2yt9_A            3 SGSSGVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGF   75 (95)
T ss_dssp             CCCSCEECSSS-------CCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCB
T ss_pred             CCCCCeECCCC-------CCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchh
Confidence            36789999999       99999999999999999999999999999999999999999999 665  899999 99999


Q ss_pred             CChhHHHHHHHHhcC
Q 010389          173 SRRDSFITHRAFCDM  187 (512)
Q Consensus       173 ~~~~~L~~H~~~hh~  187 (512)
                      .+...|.+|++..|.
T Consensus        76 ~~~~~L~~H~~~~H~   90 (95)
T 2yt9_A           76 SRPDHLNGHIKQVHS   90 (95)
T ss_dssp             SSHHHHHHHHHHTSC
T ss_pred             CCHHHHHHHHHHhcC
Confidence            999999999975553

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=3.6e-16  Score=130.37  Aligned_cols=83  Identities=19%  Similarity=0.496  Sum_probs=74.9

Q ss_pred             CCCCeeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           57 ATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        57 ~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      .+++|.|.+  |++.|.+...|++|++.|+             .+++|.|++  |       ++.|.....|.+|+++|+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~   71 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHT-------------GEKPYKCTWEGC-------DWRFARSDELTRHYRKHT   71 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHS-------------CCCCEECCSSSC-------CCEESSHHHHHHHHHHHT
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------CCccCCHHHHHHHHHHhC
Confidence            456899997  9999999999999999997             788999974  6       999999999999999999


Q ss_pred             CCccccccCCCCcccChHHHhhhhhhc
Q 010389          133 GEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       133 gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      ++++|.|.+|++.|.....|++|+++|
T Consensus        72 ~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           72 GAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            999999999999999999999998875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.63  E-value=3.3e-16  Score=127.75  Aligned_cols=82  Identities=21%  Similarity=0.559  Sum_probs=73.5

Q ss_pred             CCCeeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCC--CCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389           58 TNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus        58 ~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      .++|.|.+  |++.|.....|.+|++.|+             ++++|.|+  .|       ++.|.....|.+|+++|++
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHT-------------GEKPYHCDWDGC-------GWKFARSDELTRHYRKHTG   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSC-------------SSCCEECCSTTT-------CCEESSHHHHHHHHHHHHC
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcC-------------CCCCcCCCCCCC-------CCccCCHHHHHHHHHHcCC
Confidence            46799999  9999999999999999987             78889997  47       9999999999999999999


Q ss_pred             CccccccCCCCcccChHHHhhhhhhc
Q 010389          134 EKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       134 ekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      +++|.|.+|++.|.....|..|+++|
T Consensus        63 ~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHhh
Confidence            99999999999999999999998875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=6.1e-16  Score=131.31  Aligned_cols=82  Identities=22%  Similarity=0.287  Sum_probs=75.6

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCCh
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRR  175 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~  175 (512)
                      .++++|.|++|       ++.|.....|++|+++|  +++|.|.+|++.|.....|++|++.+++++|+|. |++.|.+.
T Consensus        12 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A           12 ENKEVYQCRLC-------NAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCBCTTT-------CCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSH
T ss_pred             CCCcCeECCCC-------CCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHHcCCCCCccCccccchhCCH
Confidence            48899999999       99999999999999998  4899999999999999999999953678999999 99999999


Q ss_pred             hHHHHHHHHhcC
Q 010389          176 DSFITHRAFCDM  187 (512)
Q Consensus       176 ~~L~~H~~~hh~  187 (512)
                      ..|.+|++.+|.
T Consensus        83 ~~L~~H~~~~H~   94 (107)
T 1wjp_A           83 FSIWRHQVEVHN   94 (107)
T ss_dssp             HHHHHHHHHTSC
T ss_pred             HHHHHHHHHHcC
Confidence            999999985553

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.59  E-value=8.5e-17  Score=131.88  Aligned_cols=83  Identities=19%  Similarity=0.319  Sum_probs=78.5

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCChhH
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDS  177 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~  177 (512)
                      +++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++|..++|.|. |++.|.....
T Consensus         1 ek~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~   73 (88)
T 1llm_C            1 MKPFQCRIC-------MRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYH   73 (88)
T ss_dssp             CCCEECTTT-------CCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCC-------CCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhh
Confidence            478999999       99999999999999999999999999999999999999999999657999999 9999999999


Q ss_pred             HHHHHHHhcCc
Q 010389          178 FITHRAFCDML  188 (512)
Q Consensus       178 L~~H~~~hh~~  188 (512)
                      |..|++.+|..
T Consensus        74 L~~H~~~~h~~   84 (88)
T 1llm_C           74 LENEVARLKKL   84 (88)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hHHHHHHHHHH
Confidence            99999988754

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.58  E-value=2.4e-15  Score=125.24  Aligned_cols=84  Identities=27%  Similarity=0.544  Sum_probs=78.7

Q ss_pred             ccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCcccccc--CCCCcccChHHHhhhhhh-cCCcceecc-CC
Q 010389           96 EVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD--KCSKKYAVQSDYKAHSKV-CGTKEYKCN-CG  169 (512)
Q Consensus        96 ~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cg  169 (512)
                      ....++|.|++  |       ++.|.....|++|+++|+++++|.|.  .|++.|.....|.+|+++ +++++|+|. |+
T Consensus        10 ~~~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   82 (100)
T 2ebt_A           10 LEKRRIHYCDYPGC-------TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN   82 (100)
T ss_dssp             CCSCCCEECCSSSC-------CCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSC
T ss_pred             cccCcceEcCCCCC-------CCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCc
Confidence            34678999997  7       99999999999999999999999996  599999999999999999 788999999 99


Q ss_pred             CccCChhHHHHHHHHhc
Q 010389          170 AVFSRRDSFITHRAFCD  186 (512)
Q Consensus       170 k~F~~~~~L~~H~~~hh  186 (512)
                      +.|.+...|.+|++.|.
T Consensus        83 ~~f~~~~~l~~H~~~H~   99 (100)
T 2ebt_A           83 RSFSRSDHLALHMKRHQ   99 (100)
T ss_dssp             CBCSSHHHHHHHHHHHC
T ss_pred             CccCCHHHHHHHHHHhC
Confidence            99999999999999986

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.58  E-value=2.1e-16  Score=129.52  Aligned_cols=80  Identities=21%  Similarity=0.317  Sum_probs=76.5

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      +++|.|++|++.|.....|.+|+++|+             ++++|.|++|       ++.|.....|.+|+++|++ ++|
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~h~~-~~~   59 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHT-------------GEKPFACDIC-------GRKFARSDERKRHRDIQHI-LPI   59 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESSHHHHHHHHHHHTH-HHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHhCC-Ccc
Confidence            478999999999999999999999997             8899999999       9999999999999999995 889


Q ss_pred             cccCCCCcccChHHHhhhhhh
Q 010389          138 KCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       138 ~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      .|..|++.|.....|+.|++.
T Consensus        60 ~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C           60 LEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=3.6e-15  Score=119.01  Aligned_cols=72  Identities=18%  Similarity=0.463  Sum_probs=65.8

Q ss_pred             CCCCCeeccc--cCcccCChHHHHHHHH-hcCCCchhhcccccccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhh
Q 010389           56 LATNRFVCEI--CNKGFQRDQNLQLHRR-GHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCR  130 (512)
Q Consensus        56 ~~~k~f~C~~--Cgk~F~~~~~L~~H~r-~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~  130 (512)
                      .++++|.|..  |++.|.++.+|++|++ .|.             .+++|.|++  |       ++.|..+..|++|+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~   62 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHI-------------HQKSFSCPEPAC-------GKSFNFKKHLKEHMKL   62 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGG-------------SCCCEECSCTTT-------CCEESSHHHHHHHHHH
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhC-------------CCCCeECCCCCC-------cCccCCHHHHHHHHHH
Confidence            3567899997  9999999999999999 686             789999998  8       9999999999999999


Q ss_pred             ccCCccccccCCCCccc
Q 010389          131 KHGEKKWKCDKCSKKYA  147 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~  147 (512)
                      |+++++|.|.+|++.|.
T Consensus        63 H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           63 HSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             HHTSCCCSCCSSSCCCC
T ss_pred             hCCCCCeeCCCCCCCCC
Confidence            99999999999999984

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=2.6e-15  Score=115.30  Aligned_cols=58  Identities=26%  Similarity=0.562  Sum_probs=46.0

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|||+|++|++.|.+..+|++|+++|.             ++++|.|++|       ++.|.....|++|+++|++|+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~C-------~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHL-------------GYRPRSCPEC-------GKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHH-------------TCCCEECTTT-------CCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhC-------------CCcCeECCCC-------CCCcCCHHHHHHHhCccCCCC
Confidence            578888888888888888888888886             7788888887       788888888888888887764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.55  E-value=4e-15  Score=121.22  Aligned_cols=81  Identities=25%  Similarity=0.534  Sum_probs=76.0

Q ss_pred             CCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCcccccc--CCCCcccChHHHhhhhhh-cCCcceecc-CCCc
Q 010389           98 KKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD--KCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAV  171 (512)
Q Consensus        98 ~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~  171 (512)
                      ..+.|.|++  |       ++.|.....|.+|+++|+++++|.|.  .|++.|.....|.+|+++ +++++|.|. |++.
T Consensus         2 ~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            2 RTATHTCDYAGC-------GKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             -CCCEECCSTTT-------CCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCCeeCCCCCC-------CCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            356899999  7       99999999999999999999999997  599999999999999999 789999999 9999


Q ss_pred             cCChhHHHHHHHHh
Q 010389          172 FSRRDSFITHRAFC  185 (512)
Q Consensus       172 F~~~~~L~~H~~~h  185 (512)
                      |.+...|.+|++.|
T Consensus        75 f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           75 FSRSDHLALHMKRH   88 (89)
T ss_dssp             ESSHHHHHHHGGGG
T ss_pred             cCCHHHHHHHHHhh
Confidence            99999999999876

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.54  E-value=5.9e-16  Score=135.72  Aligned_cols=120  Identities=13%  Similarity=0.201  Sum_probs=91.5

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      .+.+.++|.|..++...  ...+..|.+.|..          ...++.+.|++|. ....+.+.|.....|..|+ +|++
T Consensus         6 ~~~~~k~~~~~~k~~~~--~~s~ee~~~~~~l----------~~~~~~~~c~~~~-~~~~~~~~~~~~~~l~~h~-~h~~   71 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFI--HVTLEELKRYHQL----------TPEQKRLIRAIVK-TLIHNPQLLDESSYLYRLL-ASKA   71 (129)
T ss_dssp             CCTTCCGGGGCSSCEEE--ECCHHHHHHHTTS----------CHHHHHHHHHHHH-HHHHCGGGTTTHHHHHHHH-HHHH
T ss_pred             hcccccccccccCCeee--eecHHhhhccccC----------ChhhCcccchhhh-cccCCCcccCCHHHHHHHH-HhCC
Confidence            45567899888766443  2345566555531          1245677788771 1111134555777788887 6899


Q ss_pred             CccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCChhHHHHHHHHhcCc
Q 010389          134 EKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITHRAFCDML  188 (512)
Q Consensus       134 ekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~~  188 (512)
                      +++|.|.+|++.|.....|++|+++| +++|.|. |++.|.+...|.+|++.||.+
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            99999999999999999999999999 9999999 999999999999999999875

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.7e-14  Score=116.62  Aligned_cols=82  Identities=17%  Similarity=0.325  Sum_probs=69.2

Q ss_pred             hcCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhh
Q 010389           49 ALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHF  128 (512)
Q Consensus        49 ~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~  128 (512)
                      ..+.+.|..+++|+|.+|++.|.+...|++|++.|+..         ...+++|+|++|       ++.|.....|.+|+
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~---------~~~~~~~~C~~C-------~~~f~~~~~L~~H~   67 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP---------NFVPAAFVCSKC-------GKTFTRRNTMARHA   67 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS---------SCCCCCEECSSS-------CCEESCHHHHHHHH
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCC---------cCCCcceECCCC-------CChhCCHHHHHHHH
Confidence            45677888899999999999999999999999887610         011378999998       99999999999999


Q ss_pred             hhccCCccccccCCCCcc
Q 010389          129 CRKHGEKKWKCDKCSKKY  146 (512)
Q Consensus       129 ~~H~gekp~~C~~C~k~F  146 (512)
                      ++|+++++|.|..|+..|
T Consensus        68 ~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           68 DNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHCCCCCSCCCCCCCCCC
T ss_pred             HHccCCCCcccCCCCCCC
Confidence            999999999999998865

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=5.4e-15  Score=113.50  Aligned_cols=57  Identities=26%  Similarity=0.465  Sum_probs=51.6

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCc
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTK  162 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~k  162 (512)
                      +|||+|++|       ++.|.....|.+|+++|+++|||.|.+|++.|.....|++|+++|..+
T Consensus         2 EKpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFC-------GKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTT-------CCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCC-------CCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            689999999       999999999999999999999999999999999999999999986443

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.4e-14  Score=115.48  Aligned_cols=66  Identities=24%  Similarity=0.433  Sum_probs=59.5

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      .+.++++|+|++|++.|.+...|++|+++|+             .+++|.|++|       ++.|.....|.+|+++|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHT-------------GEKPYKCDEC-------GKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTC-------------CSCSEECSSS-------CCEESSHHHHHHHGGGSCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcC-------------CCcCeeCCCC-------CCccCCHHHHHHHHHHhCC
Confidence            3445678999999999999999999999997             7889999999       9999999999999999999


Q ss_pred             Cccccc
Q 010389          134 EKKWKC  139 (512)
Q Consensus       134 ekp~~C  139 (512)
                      ++||+|
T Consensus        72 ~~p~~C   77 (77)
T 2cot_A           72 SGPSSG   77 (77)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999988

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.52  E-value=1e-14  Score=117.42  Aligned_cols=76  Identities=28%  Similarity=0.548  Sum_probs=67.6

Q ss_pred             Ceec--cccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           60 RFVC--EICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        60 ~f~C--~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|+|  ++|++.|..+..|++|+++|.             ++++|.|++  |       ++.|.....|++|+++|++  
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~~~C-------~~~f~~~~~l~~H~~~h~~--   58 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHT-------------QQLPYECPHEGC-------DKRFSLPSRLKRHEKVHAG--   58 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHH-------------TTCCEECCSTTC-------CCEESSHHHHHHHHHHHHS--
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhC-------------CCCCeeCCCCCC-------cCccCCHHHHHHHHHHhCC--
Confidence            5889  889999999999999999887             778899988  7       8999999999999999887  


Q ss_pred             cccccC---CCCcccChHHHhhhhhh
Q 010389          136 KWKCDK---CSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~---C~k~F~~~~~L~~H~~~  158 (512)
                       |.|.+   |++.|.....|++|+++
T Consensus        59 -~~C~~~~~C~~~f~~~~~l~~H~~~   83 (85)
T 2j7j_A           59 -YPCKKDDSCSFVGKTWTLYLKHVAE   83 (85)
T ss_dssp             -EECCSCSSCCCEESSHHHHHHHHHH
T ss_pred             -CCCCCCCCCCCccCCHHHHHHHHHh
Confidence             89988   99999999999988876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=9.2e-15  Score=118.27  Aligned_cols=77  Identities=19%  Similarity=0.399  Sum_probs=67.4

Q ss_pred             HHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC----ccccccCCCCcccChHH
Q 010389           76 LQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE----KKWKCDKCSKKYAVQSD  151 (512)
Q Consensus        76 L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge----kp~~C~~C~k~F~~~~~  151 (512)
                      |.+|+++|.             .+++|.|++|       ++.|.....|++|+++|+.+    ++|.|.+|++.|.....
T Consensus         3 ~~~H~~~H~-------------~~k~~~C~~C-------~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~   62 (86)
T 1x6h_A            3 SGSSGRTHT-------------GEKPYACSHC-------DKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT   62 (86)
T ss_dssp             TTCCSTTCC-------------CCCCEECSSS-------SCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHH
T ss_pred             cccccceec-------------CCCCCcCCCC-------CCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHH
Confidence            566888887             8899999998       99999999999999888765    78999999999999999


Q ss_pred             Hhhhhhh-cCCcceecc-CCCcc
Q 010389          152 YKAHSKV-CGTKEYKCN-CGAVF  172 (512)
Q Consensus       152 L~~H~~~-h~~kpy~C~-Cgk~F  172 (512)
                      |++|+++ +++++|.|. |+..|
T Consensus        63 L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           63 MARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             HHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             HHHHHHHccCCCCcccCCCCCCC
Confidence            9999999 788999998 88765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=7.7e-14  Score=110.26  Aligned_cols=65  Identities=22%  Similarity=0.422  Sum_probs=57.9

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      ..+.++++|+|++|++.|.++..|++|+++|+             .+++|+|++|       ++.|..+..|++|+++|+
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHT-------------GEKPYRCNIC-------GAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHC-------------CCCSEECTTT-------CCEESCHHHHHHHHHHHC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcC-------------CCCCEECCCC-------CchhCCHHHHHHHHHhcC
Confidence            34566789999999999999999999999997             7889999999       999999999999999999


Q ss_pred             CCccc
Q 010389          133 GEKKW  137 (512)
Q Consensus       133 gekp~  137 (512)
                      ++|||
T Consensus        70 ~~kp~   74 (74)
T 2lce_A           70 GEKPY   74 (74)
T ss_dssp             CSCCC
T ss_pred             CCCCC
Confidence            99886

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6.4e-14  Score=119.13  Aligned_cols=75  Identities=17%  Similarity=0.274  Sum_probs=63.5

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHH-hcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhh-hhh
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKH-FCR  130 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H-~~~  130 (512)
                      ....++++|.|++|++.|.++..|++|++ .|..          ..++++|.|++|       ++.|..+..|++| +++
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~----------~~~ekpf~C~~C-------gk~F~~~~~L~~H~~r~   73 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPN----------VVLNSSYVCVEC-------NFLTKRYDALSEHNLKY   73 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSS----------CCCSCCEEETTT-------TEEESSTHHHHTHHHHT
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCC----------CCCCCCcCCCCC-------CcccCCHHHHHHHHHHh
Confidence            44567889999999999999999999997 4730          015789999999       9999999999999 799


Q ss_pred             ccCCccccccCCCC
Q 010389          131 KHGEKKWKCDKCSK  144 (512)
Q Consensus       131 H~gekp~~C~~C~k  144 (512)
                      |+++|||.|.++.+
T Consensus        74 Htgekpy~C~~~~~   87 (102)
T 2ghf_A           74 HPGEENFKLTMVKR   87 (102)
T ss_dssp             STTCCCEEEEECCC
T ss_pred             cCCCCCeeCCcccC
Confidence            99999999998654

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.44  E-value=9.6e-14  Score=111.65  Aligned_cols=77  Identities=27%  Similarity=0.579  Sum_probs=71.6

Q ss_pred             ceeC--CCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhhcCCcceecc----CCCcc
Q 010389          101 VYVC--PEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKVCGTKEYKCN----CGAVF  172 (512)
Q Consensus       101 ~~~C--~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~h~~kpy~C~----Cgk~F  172 (512)
                      +|+|  ++|       ++.|.....|++|+++|+++++|.|.+  |++.|.....|++|+++|..  |.|.    |++.|
T Consensus         1 p~~C~~~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f   71 (85)
T 2j7j_A            1 MYVCHFENC-------GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVG   71 (85)
T ss_dssp             CEECCSTTC-------CCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEE
T ss_pred             CccCCCCCC-------CcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCcc
Confidence            5889  778       999999999999999999999999999  99999999999999999433  9995    99999


Q ss_pred             CChhHHHHHHHHhc
Q 010389          173 SRRDSFITHRAFCD  186 (512)
Q Consensus       173 ~~~~~L~~H~~~hh  186 (512)
                      .+...|.+|++.||
T Consensus        72 ~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           72 KTWTLYLKHVAECH   85 (85)
T ss_dssp             SSHHHHHHHHHHCC
T ss_pred             CCHHHHHHHHHhcC
Confidence            99999999999886

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.5e-14  Score=119.91  Aligned_cols=72  Identities=17%  Similarity=0.199  Sum_probs=49.7

Q ss_pred             CccCChhhHHhhhhhccCCccccccCCCCccc-ChHHHhhhhhh-cC-Ccceecc-CCCccCChhHHHHHHHHhcC
Q 010389          116 RALGDLTGIKKHFCRKHGEKKWKCDKCSKKYA-VQSDYKAHSKV-CG-TKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       116 k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~-~~~~L~~H~~~-h~-~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      ..+.....+.+|+++|.++++|.|.+|++.|. ....|++|+++ ++ +++|+|. |++.|.++..|.+|++.||.
T Consensus         4 ~s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            4 GSSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            34455556667777777777777777777777 77777777766 44 6677777 77777777777777777664

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.1e-13  Score=110.33  Aligned_cols=69  Identities=20%  Similarity=0.420  Sum_probs=64.9

Q ss_pred             CCcceeCCC--CCCCCCCCCCccCChhhHHhhhh-hccCCccccccC--CCCcccChHHHhhhhhh-cCCcceecc-CCC
Q 010389           98 KKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFC-RKHGEKKWKCDK--CSKKYAVQSDYKAHSKV-CGTKEYKCN-CGA  170 (512)
Q Consensus        98 ~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~-~H~gekp~~C~~--C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk  170 (512)
                      ++++|.|+.  |       ++.|.+...|++|++ .|.++++|.|.+  |++.|..+..|++|+++ +++++|.|. |++
T Consensus         4 ~~~~~~C~~~~C-------~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A            4 GSSGMPCDFPGC-------GRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             CCSSEECSSTTT-------CCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC
T ss_pred             CCCCccCCCCCC-------cCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            678899987  6       999999999999999 799999999999  99999999999999999 789999999 999


Q ss_pred             ccC
Q 010389          171 VFS  173 (512)
Q Consensus       171 ~F~  173 (512)
                      .|.
T Consensus        77 ~F~   79 (79)
T 2dlk_A           77 SSG   79 (79)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            984

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.1e-13  Score=116.15  Aligned_cols=75  Identities=16%  Similarity=0.207  Sum_probs=64.6

Q ss_pred             ccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCcc-CChhhHHhhhhhccCCccccccCCCCccc
Q 010389           69 GFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRAL-GDLTGIKKHFCRKHGEKKWKCDKCSKKYA  147 (512)
Q Consensus        69 ~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F-~~~~~Lk~H~~~H~gekp~~C~~C~k~F~  147 (512)
                      .|.....|..|++.|.             .+++|.|++|       ++.| ..+..|+.|+++| ++++|.|.+|+|.|.
T Consensus        15 ~~~~~~~~~~~~~~~~-------------~~~~~~C~~C-------~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~   73 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIV-------------DKGSVSCPTC-------QAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLR   73 (96)
T ss_dssp             SSCTTCHHHHHHHHHH-------------HTSCEECTTT-------CSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCS
T ss_pred             CCCCchHHHHHHHHhc-------------CCCCcCCCCC-------CCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeC
Confidence            4566778888988887             7889999998       9999 8999999999999 999999999999999


Q ss_pred             ChHHHhhh-hhhcCCcce
Q 010389          148 VQSDYKAH-SKVCGTKEY  164 (512)
Q Consensus       148 ~~~~L~~H-~~~h~~kpy  164 (512)
                      .+..|++| +++|.+++|
T Consensus        74 ~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           74 SLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             SHHHHHHHHHHHTCCCSS
T ss_pred             CHHHHHHHhHHhcCCCCC
Confidence            99999999 766776665

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=5.9e-14  Score=117.67  Aligned_cols=69  Identities=22%  Similarity=0.373  Sum_probs=62.6

Q ss_pred             cccccccCCcceeCCCCCCCCCCCCCccC-ChhhHHhhhhhccC-CccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389           91 QRSNKEVKKRVYVCPEKSCVHHDPTRALG-DLTGIKKHFCRKHG-EKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus        91 ~~~~~~~~~k~~~C~~C~C~~~~~~k~F~-~~~~Lk~H~~~H~g-ekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      .+...+..+++|.|++|       ++.|. .+..|++|+++|++ +++|.|.+|++.|..+..|++|+++ |+++++..
T Consensus        14 ~h~~~h~~~~~~~C~~C-------~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           14 QWQRAIHERGEAVCPTC-------NVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHTTTTTSCCCCTTT-------CCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHhccCCCcCCCCC-------CCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            34456778899999999       99999 99999999999999 9999999999999999999999999 88888654

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=7.8e-14  Score=111.12  Aligned_cols=67  Identities=18%  Similarity=0.361  Sum_probs=60.3

Q ss_pred             hHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCC--cceecc-CCCccCChhHHHHHHHHhcCcc
Q 010389          123 GIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT--KEYKCN-CGAVFSRRDSFITHRAFCDMLT  189 (512)
Q Consensus       123 ~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~--kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~  189 (512)
                      .|.+|+++|+++++|.|.+|++.|.....|++|++. |..  ++|+|. |++.|.+...|.+|++.+|...
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   72 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS   72 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCS
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCC
Confidence            367899999999999999999999999999999985 643  799999 9999999999999999988643

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=2e-13  Score=108.71  Aligned_cols=63  Identities=29%  Similarity=0.560  Sum_probs=60.0

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      .++++|.|++|       ++.|.....|++|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|
T Consensus        14 ~~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCC-------CcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            47789999999       99999999999999999999999999999999999999999999 78899998

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.7e-13  Score=105.95  Aligned_cols=64  Identities=19%  Similarity=0.283  Sum_probs=53.1

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +.++++|+|++|++.|.++.+|++|+++|+             .+++|+|++|       ++.|..+..|++|+++|+++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHC-------------TDRPFKCNYC-------SFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGC-------------CSCSEECSSS-------SCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcC-------------CCCCEeCCCC-------CCccCCHHHHHHHHHHHhCC
Confidence            556788888888888888888888888887             7788888888       88888888888888888888


Q ss_pred             cccc
Q 010389          135 KKWK  138 (512)
Q Consensus       135 kp~~  138 (512)
                      ++..
T Consensus        64 ~p~p   67 (70)
T 1x5w_A           64 MSGP   67 (70)
T ss_dssp             SCCS
T ss_pred             CCCC
Confidence            7643

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=6.4e-13  Score=104.45  Aligned_cols=64  Identities=23%  Similarity=0.389  Sum_probs=51.5

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhc
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      .+.|.++++|+|++|++.|.+...|++|+++|+             .+++|+|++|       ++.|..+..|++|+++|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~L~~H~~~H   65 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT-------------GEKPYKCLEC-------GKAFSQNSGLINHQRIH   65 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGG-------------CSCCEECSSS-------CCEESSHHHHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcC-------------CCCCeECCCC-------CcccCCHHHHHHHHHhc
Confidence            345677788888888888888888888888886             6778888888       88888888888888888


Q ss_pred             cCCc
Q 010389          132 HGEK  135 (512)
Q Consensus       132 ~gek  135 (512)
                      +++.
T Consensus        66 ~~~~   69 (72)
T 1x6e_A           66 TSGP   69 (72)
T ss_dssp             HSSS
T ss_pred             CCCC
Confidence            7654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=6e-13  Score=111.58  Aligned_cols=72  Identities=14%  Similarity=0.258  Sum_probs=66.8

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcc-cChHHHhhhhhhcCCcceecc-CCCccCChhHHHHH-HHHhc
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKY-AVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITH-RAFCD  186 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F-~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H-~~~hh  186 (512)
                      ...|.....|..|++.|+++++|.|.+|++.| .....|+.|+++|++++|.|. |++.|.++..|.+| ++.|.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~   87 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQLRSLAGMKYHVMANHN   87 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence            45677888999999999999999999999999 999999999999988999999 99999999999999 77665

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8.1e-13  Score=103.87  Aligned_cols=60  Identities=33%  Similarity=0.653  Sum_probs=40.7

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHHHhc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      +.++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |++.|.+...|.+|++.|+
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   66 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT   66 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcC
Confidence            34556666777777777777777777777666 556667776 7777777777777766665

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=8e-13  Score=101.75  Aligned_cols=60  Identities=28%  Similarity=0.568  Sum_probs=47.2

Q ss_pred             hhhccCCccccccCCCCcccChHHHhhhhhh-c--CCcceecc-CCCccCChhHHHHHHHHhcC
Q 010389          128 FCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-C--GTKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       128 ~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h--~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      +++|+++++|.|.+|++.|.....|.+|+++ |  ++++|.|. |++.|.+...|.+|++.||.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            3567778888888888888888888888877 5  56788888 88888888888888887775

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=103.60  Aligned_cols=61  Identities=21%  Similarity=0.532  Sum_probs=52.0

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcce
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      ..+++|.|++|       ++.|.....|++|+++|+++++|+|.+|++.|.....|++|+++ +++++|
T Consensus        13 ~~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           13 HSDKPYKCDRC-------QASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCSBCCTTS-------SCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCCCeECCCC-------CceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            46788888888       88888888888888888888888888888888888888888888 667765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.5e-12  Score=101.67  Aligned_cols=61  Identities=18%  Similarity=0.241  Sum_probs=47.2

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcce
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      ..+++|.|++|       ++.|.....|++|+++|+++++|+|.+|++.|.....|++|+++ |++++.
T Consensus         5 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            5 SSGHPEKCSEC-------SYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             CCCCSEECSSS-------SCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            36677888877       78888888888888888888888888888888888888888777 666553

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.31  E-value=3.6e-13  Score=117.85  Aligned_cols=82  Identities=16%  Similarity=0.242  Sum_probs=72.2

Q ss_pred             CCCCeeccccCcccC------ChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhh
Q 010389           57 ATNRFVCEICNKGFQ------RDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCR  130 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~------~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~  130 (512)
                      .++.|.|++|.+.|.      ....|..|+ .|+             ++++|.|++|       ++.|.....|++|+++
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~H~~~   96 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASK-------------AISQFVCPLC-------LMPFSSSVSLKQHIRY   96 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHH-------------HHCSEECTTT-------CCEESSHHHHHHHHHH
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhC-------------CCCCeECCCC-------CcccCCHhHHHHHHHH
Confidence            356789999988776      666777777 465             7899999999       9999999999999999


Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh-cCC
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~  161 (512)
                      |  +++|.|.+|++.|.....|++|+++ |+.
T Consensus        97 H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           97 T--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             T--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             C--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            8  8999999999999999999999999 543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.30  E-value=2.8e-12  Score=105.26  Aligned_cols=62  Identities=16%  Similarity=0.330  Sum_probs=46.6

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hcc
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RKH  132 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H~  132 (512)
                      .+...++|.|++|++.|.++.+|++|+++|+             ++++|.|++|       ++.|..+..|++|++ .|.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~-------------~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLH-------------AAQVFPCKYC-------PATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTS-------------CSSSEECTTS-------SCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhcc-------------CCCccCCCCC-------CCEeCCHHHHHHhCcccCc
Confidence            3445567888888888888888888888887             7778888877       788888888888864 566


Q ss_pred             CCc
Q 010389          133 GEK  135 (512)
Q Consensus       133 gek  135 (512)
                      +|+
T Consensus        82 ~E~   84 (85)
T 2lv2_A           82 SEN   84 (85)
T ss_dssp             TCC
T ss_pred             CCC
Confidence            554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2e-12  Score=109.89  Aligned_cols=68  Identities=18%  Similarity=0.180  Sum_probs=61.3

Q ss_pred             cccCCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hc---cCCccccccCCCCcccChHHHhhh-hhh-cCCcceecc-
Q 010389           95 KEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RK---HGEKKWKCDKCSKKYAVQSDYKAH-SKV-CGTKEYKCN-  167 (512)
Q Consensus        95 ~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H---~gekp~~C~~C~k~F~~~~~L~~H-~~~-h~~kpy~C~-  167 (512)
                      ...++++|.|++|       ++.|..+..|++|++ +|   .++++|.|.+|++.|..+..|++| +++ .++++|+|. 
T Consensus        12 ~~~gekpy~C~~C-------gk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           12 NKKVEGGYECKYC-------TFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             CCCCCSSEECSSC-------SCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEE
T ss_pred             cCCCCcCcCCCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCc
Confidence            3458899999999       999999999999998 58   568999999999999999999999 788 689999998 


Q ss_pred             CC
Q 010389          168 CG  169 (512)
Q Consensus       168 Cg  169 (512)
                      +.
T Consensus        85 ~~   86 (102)
T 2ghf_A           85 VK   86 (102)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=4.4e-12  Score=94.49  Aligned_cols=56  Identities=25%  Similarity=0.455  Sum_probs=42.9

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|+|++|++.|.+...|.+|+++|+             ++++|.|++|       ++.|.....|.+|+++|+++|
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHT-------------DVRPYHCTYC-------NFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS-------------SCCCEECSSS-------SCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcC-------------CCCCccCCCC-------CchhcCHHHHHHHHHHhcccC
Confidence            4778888888888888888877776             6677777777       777777777777777777665

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=2.7e-12  Score=95.66  Aligned_cols=54  Identities=28%  Similarity=0.482  Sum_probs=31.7

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      ++|+|++|++.|.+...|.+|+++|+             ++++|.|++|       ++.|.....|.+|+++|+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHT-------------GEKPYKCEFC-------EYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHH-------------CCCCEECSSS-------SCEESSHHHHHHHHHHHC
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcC-------------CCCCcCCCCC-------cchhCCHHHHHHHHHHhc
Confidence            45666666666666666666666665             5555666655       566666666666665554

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=6.1e-12  Score=100.14  Aligned_cols=68  Identities=16%  Similarity=0.219  Sum_probs=49.9

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hccC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RKHG  133 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H~g  133 (512)
                      |.++++|+|++|++.|.++..|.+|+++|+.          ...+++|.|++|       ++.|..+..|.+|++ .|.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~----------~~~~~~~~C~~C-------~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAE----------TVAALRFPCEFC-------GKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHH----------HTTTCCEECTTT-------CCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhc----------cCCCcccCCCCC-------CchhCCHHHHHHHHHHhCCC
Confidence            5667888888888888888888888888860          012677888887       888888888888884 4555


Q ss_pred             Cccccc
Q 010389          134 EKKWKC  139 (512)
Q Consensus       134 ekp~~C  139 (512)
                      +++...
T Consensus        65 ~~~~~~   70 (78)
T 2d9h_A           65 LLLAPQ   70 (78)
T ss_dssp             TSSCCS
T ss_pred             CCCCcc
Confidence            665543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=8.9e-12  Score=99.02  Aligned_cols=64  Identities=19%  Similarity=0.446  Sum_probs=43.7

Q ss_pred             cCccccCCCCCeeccccCcccCChHHHHHHHH-hcCCCchhhcccccccC-CcceeCCCCCCCCCCCCCccCChhhHHhh
Q 010389           50 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSNKEVK-KRVYVCPEKSCVHHDPTRALGDLTGIKKH  127 (512)
Q Consensus        50 ~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~p~~~~~~~~~~~~-~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H  127 (512)
                      .+.+.|.++++|+|++|++.|.++.+|++|++ .|.             . +++|+|++|       ++.|..+..|++|
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~-------------~~~~~~~C~~C-------~~~f~~~~~L~~H   64 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-------------ENVAKFHCPHC-------DTVIARKSDLGVH   64 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS-------------SSCSSEECSSS-------SCEESSHHHHHHH
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcC-------------CCCCccCCCCC-------CCccCCHHHHHHH
Confidence            35566777777777777777777777777776 343             3 266777776       7777777777777


Q ss_pred             hhhccC
Q 010389          128 FCRKHG  133 (512)
Q Consensus       128 ~~~H~g  133 (512)
                      +++|++
T Consensus        65 ~~~~H~   70 (77)
T 2ct1_A           65 LRKQHS   70 (77)
T ss_dssp             HHHTSC
T ss_pred             HHHhCC
Confidence            776553

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.24  E-value=6e-12  Score=103.31  Aligned_cols=54  Identities=13%  Similarity=0.338  Sum_probs=39.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ..++|+|++|       ++.|..+..|++|+++|+++|||.|.+|++.|.++..|++|++.
T Consensus        25 ~~~~h~C~~C-------gk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           25 SAECHLCPVC-------GESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             CCTTEECTTS-------CCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCEECCCC-------CCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            5566777777       77777777777777777777777777777777777777777654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.24  E-value=6.5e-12  Score=93.56  Aligned_cols=53  Identities=19%  Similarity=0.296  Sum_probs=30.6

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++
T Consensus         2 ~~~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   54 (57)
T 3uk3_C            2 SSSRECSYC-------GKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLER   54 (57)
T ss_dssp             ---CBCTTT-------CCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCccCCCC-------cchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHH
Confidence            355666665       66666666666666666666666666666666666666666555

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5.6e-12  Score=100.35  Aligned_cols=57  Identities=21%  Similarity=0.503  Sum_probs=46.7

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh-cC---Ccceecc-CCCccCChhHHHHHHHHhcC
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV-CG---TKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~---~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      |+++++|+|.+|++.|.....|++|+++ ++   +++|.|. |++.|.+...|.+|++.+|.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            6788888888888888888888888888 33   7888888 88888888888888877764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=6.6e-12  Score=96.54  Aligned_cols=61  Identities=20%  Similarity=0.372  Sum_probs=35.7

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHh-cCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRG-HNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~-H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      .|.++++|.|++|++.|.+..+|++|++. |.            .++++|.|++|       ++.|.....|++|+++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~------------~~~~~~~C~~C-------~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK------------RNVKVYPCPFC-------FKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSS------------SSCCCEECTTT-------CCEESCHHHHHHHHHHHT
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcC------------CCCcCeECCCC-------CCccCCHHHHHHHHHHHc
Confidence            34455666666666666666666666665 31            14455666665       566666666666665555


Q ss_pred             C
Q 010389          133 G  133 (512)
Q Consensus       133 g  133 (512)
                      +
T Consensus        65 ~   65 (66)
T 2drp_A           65 K   65 (66)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=9e-12  Score=102.64  Aligned_cols=62  Identities=18%  Similarity=0.211  Sum_probs=53.0

Q ss_pred             CCeeccccCcccCChHHHHHHHHh-cCCCchhhcccccccCCcc--------eeCCCCCCCCCCCCCccCChhhHHhhhh
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRG-HNLPWKLRQRSNKEVKKRV--------YVCPEKSCVHHDPTRALGDLTGIKKHFC  129 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~-H~~p~~~~~~~~~~~~~k~--------~~C~~C~C~~~~~~k~F~~~~~Lk~H~~  129 (512)
                      ..|.|++|++.|.++.+|.+|+++ |.             ++++        |.|++|       ++.|..+..|++|++
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~~~~~~~~c~~~~C~~C-------~k~f~~~~~L~~H~~   83 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHV-------------GGPEQNNHVCYWEECPRE-------GKSFKAKYKLVNHIR   83 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTT-------------CCTTCSCCCCCCTTCSST-------TCCCSSHHHHHHHHH
T ss_pred             CCCcccccccccCCHHHHHHHHHHhcc-------------CCCCCCccceeccCCCCC-------CcccCCHHHHHHHHH
Confidence            357899999999999999999998 65             4444        778877       889999999999999


Q ss_pred             hccCCcccccc
Q 010389          130 RKHGEKKWKCD  140 (512)
Q Consensus       130 ~H~gekp~~C~  140 (512)
                      +|+++++|.|.
T Consensus        84 ~H~~~k~~~C~   94 (95)
T 2ej4_A           84 VHTGEKSGPSS   94 (95)
T ss_dssp             HHHTCCCCSSC
T ss_pred             hcCCCCCCCCC
Confidence            99999999886

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=2.3e-11  Score=91.64  Aligned_cols=54  Identities=31%  Similarity=0.628  Sum_probs=33.2

Q ss_pred             CeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhh-hhccC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHF-CRKHG  133 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~-~~H~g  133 (512)
                      +|+|++|++.|.+...|.+|+++|+             ++++|.|++|       ++.|.....|.+|+ ++|.+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHT-------------NEKPYPCGLC-------NRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTT-------------SSCSEECTTT-------CCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhC-------------CCCCccCCCC-------CCccCCHHHHHHHHHHHcCC
Confidence            5666666666666666666666665             5556666666       66666666666664 34443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.17  E-value=1.9e-11  Score=90.91  Aligned_cols=54  Identities=19%  Similarity=0.404  Sum_probs=45.5

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~  161 (512)
                      +|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|+++ +++
T Consensus         1 p~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEEC-------GIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCC-------cCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            5778888       88888888888888888888888888888888888888888887 444

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=3.2e-11  Score=90.78  Aligned_cols=54  Identities=24%  Similarity=0.550  Sum_probs=45.5

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhh-hcC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSK-VCG  160 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~-~h~  160 (512)
                      ++|.|++|       ++.|.....|.+|+++|+++++|.|.+|++.|.....|.+|++ +|.
T Consensus         1 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~   55 (60)
T 2adr_A            1 RSFVCEVC-------TRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS   55 (60)
T ss_dssp             CCBCCTTT-------CCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcCcCCCC-------ccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence            46888888       8889888899999888888888889889888888888888874 454

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=4.6e-13  Score=104.59  Aligned_cols=69  Identities=14%  Similarity=0.171  Sum_probs=62.1

Q ss_pred             hHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHH
Q 010389           73 DQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDY  152 (512)
Q Consensus        73 ~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L  152 (512)
                      +..|..|+++|.             ++++|.|++|       ++.|.....|..       +++|.|.+|++.|.....|
T Consensus         3 ~~~l~~H~~~h~-------------~~~~~~C~~C-------~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l   55 (73)
T 2ctu_A            3 SGSSGKRQKIHL-------------GDRSQKCSKC-------GIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAAL   55 (73)
T ss_dssp             CCSCCCCCCCCC-------------CCSEEECSSS-------CCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSS
T ss_pred             chhHHHHHHHhC-------------CCCCeeCCcc-------cchhCCHHHhCc-------CCCCCCCCCChhhcCHHHH
Confidence            456778888887             8899999999       999999998887       7899999999999999999


Q ss_pred             hhhhhh-cCCcceecc-C
Q 010389          153 KAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       153 ~~H~~~-h~~kpy~C~-C  168 (512)
                      .+|+++ +++++|.|. |
T Consensus        56 ~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           56 NKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHhhcCCCCCCCCCC
Confidence            999999 688999998 7

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.2e-12  Score=102.12  Aligned_cols=68  Identities=16%  Similarity=0.196  Sum_probs=61.7

Q ss_pred             hhcCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhh
Q 010389           48 IALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKH  127 (512)
Q Consensus        48 ~~~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H  127 (512)
                      +..|.+.|.++++|.|++|++.|.....|..                    +++|.|++|       ++.|.....|.+|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~--------------------~~~~~C~~C-------~~~f~~~~~l~~H   58 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR--------------------RKTPMCEKC-------RKDSCQEAALNKD   58 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC--------------------SSSCCCHHH-------HHTCSCCCSSCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc--------------------CCCCCCCCC-------ChhhcCHHHHHHH
Confidence            4567778889999999999999999887764                    578999999       9999999999999


Q ss_pred             hhhccCCccccccCC
Q 010389          128 FCRKHGEKKWKCDKC  142 (512)
Q Consensus       128 ~~~H~gekp~~C~~C  142 (512)
                      +++|+++++|.|.+|
T Consensus        59 ~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           59 EGNESGKKTSGPSSG   73 (73)
T ss_dssp             SSCCCCCCCSSCCCC
T ss_pred             HHhhcCCCCCCCCCC
Confidence            999999999999998

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=2.4e-11  Score=95.26  Aligned_cols=55  Identities=22%  Similarity=0.552  Sum_probs=36.6

Q ss_pred             CCcceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389           98 KKRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus        98 ~~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      ++++|.|+  .|       ++.|.....|++|+++|+++++|.|.+|++.|.....|.+|+++|
T Consensus        16 ~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           16 KMRPYACPVESC-------DRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCEECSSTTB-------CCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             CCCccCCcCCCC-------CCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            55666665  35       666666666666666666666666666666666666666666653

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=8.7e-11  Score=92.01  Aligned_cols=61  Identities=18%  Similarity=0.391  Sum_probs=55.9

Q ss_pred             ccccCCCCCeecc--ccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhh
Q 010389           52 PKTLLATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC  129 (512)
Q Consensus        52 ~~~~~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~  129 (512)
                      ...+..+++|.|+  .|++.|.++..|++|+++|.             ++++|.|++|       ++.|.....|.+|++
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~-------------~~~~~~C~~C-------~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHT-------------GQKPFQCRIC-------MRNFSRSDHLTTHIR   70 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHH-------------CCCCEECTTT-------CCEESCHHHHHHHHT
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhC-------------CCCCeECCCC-------CchhCCHHHHHHHHH
Confidence            4556778999997  59999999999999999998             8899999999       999999999999999


Q ss_pred             hcc
Q 010389          130 RKH  132 (512)
Q Consensus       130 ~H~  132 (512)
                      +|+
T Consensus        71 ~Ht   73 (73)
T 1f2i_G           71 THT   73 (73)
T ss_dssp             TCC
T ss_pred             hcC
Confidence            985

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.1e-10  Score=90.14  Aligned_cols=57  Identities=16%  Similarity=0.237  Sum_probs=35.8

Q ss_pred             CCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCC-CCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCP-EKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~-~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .+++|+|.+|++.|. ..+|+.|+++ .             ++++|.|+ +|       ++.|..+..|++|+++|..++
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~-------------~~~p~~C~~~C-------~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-C-------------PRLPVACPNQC-------GVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-C-------------SSSEEECTTCC-------SCCEEETTTHHHHHHTTSSSC
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-c-------------CCcCccCCccc-------CcccccHHHHHHHHHhhcccC
Confidence            345666666666666 6666666665 4             55666666 66       666666666666666665544

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.04  E-value=1.8e-10  Score=94.67  Aligned_cols=61  Identities=15%  Similarity=0.203  Sum_probs=55.1

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhh-ccCCcc--------ccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCR-KHGEKK--------WKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~-H~gekp--------~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      ..|.|++|       ++.|.....|.+|+++ |.++++        |.|.+|++.|.....|++|+++ +++++|+|.
T Consensus        24 ~~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSC-------DRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCC-------CCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCccccc-------ccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            34567777       9999999999999998 888887        9999999999999999999999 789999984

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=4.5e-10  Score=87.72  Aligned_cols=56  Identities=18%  Similarity=0.420  Sum_probs=40.9

Q ss_pred             CCCCCeeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhc
Q 010389           56 LATNRFVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus        56 ~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      ...++|.|.+  |++.|.+...|++|+++|+             ++++|.|++  |       ++.|..+..|++|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~~~C-------~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------------GEKPFSCSWKGC-------ERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHS-------------SSCSEECCCTTC-------CCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcC-------------CCCCccCCCCCC-------CcccCCHHHHHhHhhcC
Confidence            3456778877  8888888888888887776             667777754  6       77777777777777665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.99  E-value=2.8e-10  Score=88.94  Aligned_cols=57  Identities=19%  Similarity=0.436  Sum_probs=49.4

Q ss_pred             ccCCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhhc
Q 010389           96 EVKKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus        96 ~~~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~h  159 (512)
                      ....++|.|++  |       ++.|.....|++|+++|+++++|+|.+  |++.|.....|++|+++|
T Consensus        12 ~~~~~~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGC-------GKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTT-------CCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCC-------ccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34678899988  7       999999999999999999999999975  999999999999998764

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.6e-10  Score=81.13  Aligned_cols=43  Identities=23%  Similarity=0.427  Sum_probs=31.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.96  E-value=2.5e-10  Score=81.22  Aligned_cols=43  Identities=28%  Similarity=0.500  Sum_probs=32.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477777777778888888888887788888777 567777776 5

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.96  E-value=2.4e-10  Score=81.45  Aligned_cols=43  Identities=23%  Similarity=0.445  Sum_probs=33.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577778888888888888888888888888877 577788876 5

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=81.23  Aligned_cols=43  Identities=21%  Similarity=0.383  Sum_probs=32.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477777777778888888888877778888777 567777776 5

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.6e-10  Score=81.03  Aligned_cols=43  Identities=21%  Similarity=0.414  Sum_probs=33.0

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477777777788888888888888888888777 567777776 5

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.95  E-value=2.4e-10  Score=81.31  Aligned_cols=43  Identities=28%  Similarity=0.519  Sum_probs=31.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=3e-10  Score=80.70  Aligned_cols=43  Identities=26%  Similarity=0.471  Sum_probs=34.4

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            577788888888888888888888888888877 677888887 6

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=82.25  Aligned_cols=43  Identities=21%  Similarity=0.343  Sum_probs=33.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            577777778888888888888888888888777 577778776 5

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.1e-10  Score=80.66  Aligned_cols=43  Identities=26%  Similarity=0.488  Sum_probs=33.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477778888888888888888888888888877 567788877 6

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=81.24  Aligned_cols=43  Identities=21%  Similarity=0.444  Sum_probs=30.5

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.94  E-value=2.6e-10  Score=81.08  Aligned_cols=43  Identities=21%  Similarity=0.412  Sum_probs=31.2

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777 566777776 5

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.3e-10  Score=81.43  Aligned_cols=42  Identities=24%  Similarity=0.443  Sum_probs=32.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            577777777777777777777777777777777 567777776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=81.15  Aligned_cols=43  Identities=23%  Similarity=0.465  Sum_probs=32.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            577777777777777777777777777777777 567777776 5

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.3e-10  Score=80.57  Aligned_cols=43  Identities=30%  Similarity=0.417  Sum_probs=33.5

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777788888888888888888888888777 567778876 5

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=3.6e-10  Score=80.38  Aligned_cols=42  Identities=21%  Similarity=0.393  Sum_probs=30.2

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66777777777777777777777777777777 566777776 5

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.2e-10  Score=81.61  Aligned_cols=43  Identities=16%  Similarity=0.388  Sum_probs=31.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467777777777777777777777777777777 566777776 5

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=81.07  Aligned_cols=43  Identities=21%  Similarity=0.417  Sum_probs=30.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=80.62  Aligned_cols=41  Identities=24%  Similarity=0.470  Sum_probs=28.4

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            66666777777777777777777777777766 556667766

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.7e-10  Score=80.93  Aligned_cols=43  Identities=26%  Similarity=0.481  Sum_probs=31.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 566777776 5

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.8e-10  Score=80.93  Aligned_cols=43  Identities=19%  Similarity=0.403  Sum_probs=31.0

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 566777776 5

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.93  E-value=2.6e-10  Score=81.15  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCREC-------DMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSS-------CCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            8999999999       9999999999999999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.8e-10  Score=79.83  Aligned_cols=42  Identities=26%  Similarity=0.420  Sum_probs=29.3

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      |+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|. |
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            66667777777777777777777777777776 566777776 5

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.8e-10  Score=80.99  Aligned_cols=43  Identities=23%  Similarity=0.413  Sum_probs=31.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777777777777777777777777777777 567777776 5

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.1e-10  Score=80.70  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=30.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            366677777777777777777777777777777 566777776 5

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=4.8e-10  Score=86.43  Aligned_cols=54  Identities=20%  Similarity=0.281  Sum_probs=48.9

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc-CCCCcccChHHHhhhhhhc
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD-KCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~-~C~k~F~~~~~L~~H~~~h  159 (512)
                      -.+++|.|++|       ++.|. ...|+.|+++ ++++||.|. +|++.|..+..|++|+++|
T Consensus         6 C~~~~~~C~~C-------~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~h   60 (66)
T 2eod_A            6 SGKRTQPCTYC-------TKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDS   60 (66)
T ss_dssp             CCCCEEECSSS-------CCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTT
T ss_pred             CCCCCeecccc-------CCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhh
Confidence            46789999998       99999 9999999998 899999999 9999999999999999885

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.9e-10  Score=80.76  Aligned_cols=43  Identities=28%  Similarity=0.441  Sum_probs=30.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.6e-10  Score=81.11  Aligned_cols=38  Identities=16%  Similarity=0.186  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVC-------GKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCc-------CCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.7e-10  Score=80.42  Aligned_cols=38  Identities=18%  Similarity=0.185  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTEC-------GKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.92  E-value=3.9e-10  Score=80.29  Aligned_cols=42  Identities=29%  Similarity=0.456  Sum_probs=30.5

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      |+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|. |
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777777777777777777777777777777 566777776 5

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.7e-10  Score=81.02  Aligned_cols=43  Identities=23%  Similarity=0.406  Sum_probs=30.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.8e-10  Score=80.25  Aligned_cols=38  Identities=21%  Similarity=0.254  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTTT-------CCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCCC-------CCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=4.5e-10  Score=79.95  Aligned_cols=41  Identities=24%  Similarity=0.415  Sum_probs=27.8

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            56666666777777777777777777777666 556666665

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.92  E-value=3.6e-10  Score=80.28  Aligned_cols=43  Identities=26%  Similarity=0.403  Sum_probs=30.0

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            466677777777777777777777777777766 556777776 5

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=80.70  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=27.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCS
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            366666666666666666666666666666666 456666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.1e-10  Score=80.70  Aligned_cols=43  Identities=26%  Similarity=0.458  Sum_probs=30.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=3.6e-10  Score=80.38  Aligned_cols=38  Identities=21%  Similarity=0.306  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCIDC-------GKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTTT-------CCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCCC-------CceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.92  E-value=2.8e-10  Score=80.88  Aligned_cols=38  Identities=13%  Similarity=0.114  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            9 GVKPYGCSQC-------AKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3.9e-10  Score=80.20  Aligned_cols=38  Identities=18%  Similarity=0.186  Sum_probs=26.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            9 GEKPYKCEEC-------GKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCcCccCCCc-------cchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            6666777766       6777777777777777777777777666

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.1e-10  Score=80.74  Aligned_cols=42  Identities=29%  Similarity=0.504  Sum_probs=28.4

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            466666666777777777777777777777666 456666665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.7e-10  Score=81.04  Aligned_cols=43  Identities=28%  Similarity=0.470  Sum_probs=30.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.8e-10  Score=80.96  Aligned_cols=43  Identities=28%  Similarity=0.540  Sum_probs=32.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|. |
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577777777777777777777777777777777 567777776 5

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.91  E-value=2.7e-10  Score=81.10  Aligned_cols=38  Identities=24%  Similarity=0.276  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            9 GEKPYECKEC-------GKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSCBCSSS-------CCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCceECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.91  E-value=3e-10  Score=80.78  Aligned_cols=38  Identities=18%  Similarity=0.233  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNEC-------GKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSS-------CCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCC-------cchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3e-10  Score=80.73  Aligned_cols=38  Identities=13%  Similarity=0.055  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            9 GEKPHECREC-------GKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCBCTTT-------CCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCeeCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.7e-10  Score=80.22  Aligned_cols=38  Identities=21%  Similarity=0.260  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            9 GEKLYNCKEC-------GKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCBTTT-------TBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCeECCCC-------CCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.8e-10  Score=80.29  Aligned_cols=38  Identities=18%  Similarity=0.218  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            9 GEKPYKCNEC-------GKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCeECCCC-------CchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.7e-10  Score=80.32  Aligned_cols=43  Identities=21%  Similarity=0.453  Sum_probs=30.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            466777777777777777777777777777777 566777776 5

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=4.2e-10  Score=80.12  Aligned_cols=38  Identities=21%  Similarity=0.253  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSEC-------GKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSSS-------CCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCcc-------ChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.4e-10  Score=80.52  Aligned_cols=38  Identities=18%  Similarity=0.195  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            9 GEKPYICAEC-------GKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCcCeECCCC-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.7e-10  Score=79.88  Aligned_cols=38  Identities=16%  Similarity=0.190  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCEDC-------GKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSSS-------CCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCccc-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.7e-10  Score=80.96  Aligned_cols=38  Identities=16%  Similarity=0.176  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            9 GEKPYKCNEC-------GKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCSSEETTT-------TEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCeECCCc-------ChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.1e-10  Score=80.06  Aligned_cols=42  Identities=26%  Similarity=0.492  Sum_probs=31.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            477777777777777777777777777777777 566777775

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=3.3e-10  Score=80.48  Aligned_cols=38  Identities=16%  Similarity=0.161  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            9 GEKSHTCDEC-------GKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCSSEECTTT-------CCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCeECCCc-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.7e-10  Score=81.08  Aligned_cols=38  Identities=21%  Similarity=0.287  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNEC-------GKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.2e-10  Score=80.56  Aligned_cols=38  Identities=13%  Similarity=0.198  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            9 GEKPYKCSDC-------GKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             SCCSCBCSSS-------CCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCccCCcc-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=80.05  Aligned_cols=38  Identities=18%  Similarity=0.124  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            9 GERPHKCNEC-------GKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCCCeeCCCC-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.4e-10  Score=79.93  Aligned_cols=38  Identities=18%  Similarity=0.235  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHEC-------GKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTT-------CCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.1e-10  Score=79.33  Aligned_cols=38  Identities=13%  Similarity=0.075  Sum_probs=25.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            7 GEKPFGCSCC-------EKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             SCCCEECSSS-------SCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCcCccCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5666666666       6666666666666666666666666665

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=5.5e-10  Score=79.60  Aligned_cols=42  Identities=24%  Similarity=0.437  Sum_probs=30.1

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-C
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-C  168 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-C  168 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|. |
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66677777777777777777777777777777 566777776 5

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.90  E-value=3.9e-10  Score=80.31  Aligned_cols=38  Identities=16%  Similarity=0.229  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVEC-------GKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSSS-------CCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.90  E-value=5.2e-10  Score=79.45  Aligned_cols=38  Identities=21%  Similarity=0.199  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKEC-------GKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCcc-------ccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.9e-10  Score=80.86  Aligned_cols=38  Identities=26%  Similarity=0.321  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            9 GERPYICTVC-------GKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.3e-10  Score=80.60  Aligned_cols=38  Identities=21%  Similarity=0.197  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            9 GENPYECHEC-------GKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCcCcCCCCC-------CcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.7e-10  Score=79.78  Aligned_cols=38  Identities=16%  Similarity=0.206  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGEC-------GKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTTT-------CCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=1.1e-09  Score=81.05  Aligned_cols=46  Identities=13%  Similarity=0.252  Sum_probs=39.0

Q ss_pred             ccCCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hccCCccccccCCCCcccC
Q 010389           96 EVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RKHGEKKWKCDKCSKKYAV  148 (512)
Q Consensus        96 ~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H~gekp~~C~~C~k~F~~  148 (512)
                      +..+++|.|++|       ++.|.....|++|++ +|+++++|+|.+|++.|.+
T Consensus         7 ~~~~k~~~C~~C-------~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCC-------CcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            347788899888       888999999999987 8888888999999988865

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.1e-10  Score=79.47  Aligned_cols=38  Identities=21%  Similarity=0.291  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNEC-------GKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTT-------CCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=5e-10  Score=79.73  Aligned_cols=38  Identities=18%  Similarity=0.147  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            9 STKSHQCHEC-------GRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSEECSSS-------CCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCeECCcC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=4.8e-10  Score=79.74  Aligned_cols=38  Identities=18%  Similarity=0.282  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|++++||+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNEC-------GKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSS-------CCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcC-------CCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.8e-10  Score=79.20  Aligned_cols=38  Identities=24%  Similarity=0.270  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            9 GEKPYVCDYC-------GKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCeECCCC-------ChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.9e-10  Score=80.92  Aligned_cols=38  Identities=16%  Similarity=0.200  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSS-------CCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCcC-------CchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=79.41  Aligned_cols=38  Identities=16%  Similarity=0.180  Sum_probs=23.2

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            9 GEKPYECSIC-------GKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCcCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5556666665       6666666666666666666666666555

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.2e-10  Score=79.53  Aligned_cols=38  Identities=11%  Similarity=0.138  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            9 GEKPFKCDIC-------GKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCSSS-------CCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCcCCCcC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=7.2e-10  Score=78.98  Aligned_cols=43  Identities=19%  Similarity=0.320  Sum_probs=32.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhh-h-cCCcceecc-C
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSK-V-CGTKEYKCN-C  168 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~-~-h~~kpy~C~-C  168 (512)
                      .|+++|+++++|.|.+|++.|.....|++|++ + .++++|+|. |
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            46777777777777777777777777777777 6 566777776 5

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.3e-10  Score=79.97  Aligned_cols=38  Identities=24%  Similarity=0.271  Sum_probs=36.8

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            9 GEKPYRCAEC-------GKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999986

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=5.9e-10  Score=79.27  Aligned_cols=38  Identities=16%  Similarity=0.142  Sum_probs=25.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEEC-------GKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCC-------CCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5666666666       6666666666666666666666666665

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.2e-10  Score=79.54  Aligned_cols=38  Identities=18%  Similarity=0.210  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            9 GEKPYKCSEC-------GKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCcCeECCCC-------CCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=4.6e-10  Score=79.81  Aligned_cols=38  Identities=13%  Similarity=0.176  Sum_probs=26.2

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEKC-------GKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETTT-------TEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            6666777666       6677777777777766666667776665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.87  E-value=6.9e-10  Score=78.97  Aligned_cols=38  Identities=13%  Similarity=0.086  Sum_probs=25.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQC-------EKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666666666       6666666666666666666666666665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.6e-09  Score=76.92  Aligned_cols=44  Identities=23%  Similarity=0.319  Sum_probs=41.1

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGT-------------TCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            5677889999999999999999999999999998             8899999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5e-10  Score=79.82  Aligned_cols=38  Identities=21%  Similarity=0.304  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMEC-------GKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTT-------TBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.8e-10  Score=78.93  Aligned_cols=38  Identities=16%  Similarity=0.207  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            9 GEKPFKCEEC-------GKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEEETTT-------TEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2e-09  Score=76.45  Aligned_cols=45  Identities=20%  Similarity=0.375  Sum_probs=41.4

Q ss_pred             cCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           50 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        50 ~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      .+.+.|.++++|.|++|++.|.++.+|++|+++|+             ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTS-------------SCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            35677889999999999999999999999999998             8899999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.8e-09  Score=75.88  Aligned_cols=43  Identities=19%  Similarity=0.346  Sum_probs=40.1

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      .+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA-------------EEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHT-------------SSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            467888999999999999999999999999998             8899999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=5.6e-10  Score=79.47  Aligned_cols=38  Identities=24%  Similarity=0.317  Sum_probs=37.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            9 GERPYGCNEC-------GKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCEEcccc-------CcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       9999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.3e-10  Score=79.00  Aligned_cols=38  Identities=13%  Similarity=0.046  Sum_probs=24.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            9 GEKPCKCTEC-------GKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCeeCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566666666       6666666666666666666666666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=6.9e-10  Score=78.89  Aligned_cols=38  Identities=13%  Similarity=0.140  Sum_probs=24.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            9 REKSHQCREC-------GEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCCEECTTT-------CCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CCCCEEcccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566666666       6666666666666666666666666665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.86  E-value=2.2e-09  Score=76.36  Aligned_cols=44  Identities=23%  Similarity=0.380  Sum_probs=41.0

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|+             ++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT-------------REKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGC-------------CSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcC-------------CCCCCCCCCC
Confidence            4577889999999999999999999999999998             8899999987

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=5.6e-10  Score=79.36  Aligned_cols=38  Identities=18%  Similarity=0.221  Sum_probs=24.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+|
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNEC-------GKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTT-------TEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            5566666666       6666666666666666666666666655

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=6e-10  Score=79.29  Aligned_cols=38  Identities=18%  Similarity=0.149  Sum_probs=24.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVEC-------GKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECccc-------CchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5566666666       6666666666666666666666666665

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=2.3e-09  Score=76.14  Aligned_cols=44  Identities=25%  Similarity=0.380  Sum_probs=41.0

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|+             ++++|.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS-------------GEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSC-------------CSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            5567889999999999999999999999999998             8899999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.2e-09  Score=76.15  Aligned_cols=45  Identities=20%  Similarity=0.251  Sum_probs=41.5

Q ss_pred             cCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           50 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        50 ~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      .+.+.|.++++|+|++|++.|.++..|++|+++|.             ++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV-------------DDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCC-------------SCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            35677889999999999999999999999999998             8899999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.8e-09  Score=76.68  Aligned_cols=44  Identities=25%  Similarity=0.437  Sum_probs=41.1

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT-------------GERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSC-------------SCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhC-------------CCCCCCCCCC
Confidence            5677889999999999999999999999999998             8899999987

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1.2e-09  Score=77.59  Aligned_cols=42  Identities=24%  Similarity=0.469  Sum_probs=35.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            578888888888888888888888888888888 677888885

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=76.02  Aligned_cols=41  Identities=24%  Similarity=0.505  Sum_probs=36.2

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            478889999999999999999999999999988 67888887

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=75.86  Aligned_cols=41  Identities=17%  Similarity=0.358  Sum_probs=34.4

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            67788888888888888888888888888888 677888874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.9e-09  Score=76.66  Aligned_cols=44  Identities=23%  Similarity=0.438  Sum_probs=40.9

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT-------------GEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHH-------------CCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHc-------------CCCCCCCCCC
Confidence            4567888999999999999999999999999998             8899999987

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=76.84  Aligned_cols=42  Identities=19%  Similarity=0.373  Sum_probs=36.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            588888999999999999999999999999988 678888884

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.84  E-value=1.1e-09  Score=76.18  Aligned_cols=41  Identities=17%  Similarity=0.455  Sum_probs=33.2

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            67778888888888888888888888888888 677888874

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.2e-09  Score=77.70  Aligned_cols=42  Identities=26%  Similarity=0.462  Sum_probs=34.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.1e-09  Score=76.28  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=41.1

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHS-------------SCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcC-------------CCCCCCCCCC
Confidence            5667889999999999999999999999999998             8899999987

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.3e-09  Score=77.43  Aligned_cols=42  Identities=21%  Similarity=0.477  Sum_probs=35.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888885

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=2.8e-10  Score=87.01  Aligned_cols=51  Identities=18%  Similarity=0.375  Sum_probs=37.9

Q ss_pred             HHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhH
Q 010389          124 IKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDS  177 (512)
Q Consensus       124 Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~  177 (512)
                      |..|+++|+++++|.|.+|++.|.....|.   ++ .++++|+|. |++.|....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~   54 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDES   54 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcc
Confidence            556778888888888888888887777765   44 567788888 8888876554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=2.7e-09  Score=75.77  Aligned_cols=44  Identities=16%  Similarity=0.083  Sum_probs=41.0

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.+...|++|+++|.             ++++|+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHM-------------GQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHS-------------CCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            5677889999999999999999999999999998             8899999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.4e-09  Score=77.35  Aligned_cols=42  Identities=26%  Similarity=0.551  Sum_probs=35.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            588888888889998899999888888888888 677888885

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.2e-09  Score=77.62  Aligned_cols=42  Identities=26%  Similarity=0.516  Sum_probs=35.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888875

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=1.1e-09  Score=77.99  Aligned_cols=38  Identities=26%  Similarity=0.301  Sum_probs=37.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|++ +|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIEC-------GKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSSS-------CCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCcc-------CchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            8899999999       999999999999999 9999999999998

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.2e-10  Score=78.22  Aligned_cols=42  Identities=26%  Similarity=0.458  Sum_probs=34.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888875

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.3e-09  Score=77.46  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=34.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            478888888888888888888888888888888 677888874

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=78.04  Aligned_cols=38  Identities=18%  Similarity=0.239  Sum_probs=22.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKEC-------GKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCEECCcC-------CchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5555666655       5666666666666666666666666544

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3e-09  Score=75.54  Aligned_cols=44  Identities=20%  Similarity=0.409  Sum_probs=40.1

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      ..+.|.++++|+|++|++.|.++.+|++|+++|+             ++++|+|++|
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTS-------------SSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            3467888999999999999999999999999998             8889999887

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=77.85  Aligned_cols=42  Identities=24%  Similarity=0.491  Sum_probs=34.4

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|+|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477888888888888888888888888888888 677888875

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.5e-09  Score=77.27  Aligned_cols=42  Identities=31%  Similarity=0.527  Sum_probs=34.7

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478888888888888888888888888888888 677888874

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=77.31  Aligned_cols=42  Identities=24%  Similarity=0.479  Sum_probs=33.4

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            477788888888888888888888888888877 567888774

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=77.58  Aligned_cols=42  Identities=26%  Similarity=0.480  Sum_probs=33.0

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            477778888888888888888888888888877 667778774

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.5e-09  Score=77.03  Aligned_cols=42  Identities=19%  Similarity=0.423  Sum_probs=33.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477788888888888888888888888888877 577788774

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.81  E-value=1.1e-09  Score=77.82  Aligned_cols=42  Identities=24%  Similarity=0.530  Sum_probs=33.0

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            477778888888888888888888888888877 567778774

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.3e-10  Score=78.29  Aligned_cols=42  Identities=19%  Similarity=0.372  Sum_probs=34.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888875

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.8e-09  Score=76.83  Aligned_cols=42  Identities=19%  Similarity=0.438  Sum_probs=34.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            377888888888888888888888888888888 677888874

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.1e-09  Score=77.85  Aligned_cols=42  Identities=24%  Similarity=0.464  Sum_probs=35.2

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|+|.+|++.|.....|++|+++ +++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            578888888888888888888888888888888 677888885

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.81  E-value=2.2e-10  Score=87.63  Aligned_cols=57  Identities=12%  Similarity=0.308  Sum_probs=49.6

Q ss_pred             HHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhh
Q 010389           76 LQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAH  155 (512)
Q Consensus        76 L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H  155 (512)
                      |..|+++|.             ++++|.|++|       ++.|.....|.   ++|+++++|+|.+|++.|.....+..|
T Consensus         2 L~~h~~~H~-------------~~k~~~C~~C-------~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            2 IETDERDST-------------NRASFKCPVC-------SSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCCSSSCC-------------SSSEEECSSS-------CCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhhHHHHcC-------------CCCCccCCCC-------CchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            455777776             8999999999       99999998887   889999999999999999988776654

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=4.2e-09  Score=77.84  Aligned_cols=48  Identities=23%  Similarity=0.442  Sum_probs=43.1

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHH-hcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGD  120 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~  120 (512)
                      ..+..+++|+|++|++.|.+..+|++|++ +|.             ++++|+|++|       ++.|..
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~-------------~~k~~~C~~C-------~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQVW-------VSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSSS-------CCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcC-------------CCCCccCCCC-------CCCCCC
Confidence            35677899999999999999999999997 887             8899999999       898865

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.81  E-value=2.4e-09  Score=76.99  Aligned_cols=42  Identities=17%  Similarity=0.289  Sum_probs=37.9

Q ss_pred             ccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCC
Q 010389           96 EVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSK  144 (512)
Q Consensus        96 ~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k  144 (512)
                      +..+++|.|++|       ++.|.....|++|+++|+++++|.|.+|+|
T Consensus         7 ~~~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTT-------TEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCC-------CcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            347789999999       999999999999999999999999999986

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.3e-09  Score=77.31  Aligned_cols=42  Identities=24%  Similarity=0.528  Sum_probs=33.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            477788888888888888888888888888877 567888875

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=76.82  Aligned_cols=41  Identities=29%  Similarity=0.491  Sum_probs=31.7

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            67777778888888888888888888888777 567777775

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.3e-09  Score=76.43  Aligned_cols=42  Identities=21%  Similarity=0.491  Sum_probs=35.2

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|.+|+++ +++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888874

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=77.21  Aligned_cols=42  Identities=24%  Similarity=0.474  Sum_probs=31.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467777777777777777777777777777777 567777774

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4e-09  Score=74.95  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=40.7

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|++|++.|.++.+|++|+++|.             ++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT-------------GEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHC-------------CCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            5677889999999999999999999999999998             8899999875

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=76.74  Aligned_cols=42  Identities=24%  Similarity=0.485  Sum_probs=33.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            477788888888888888888888888888887 677888875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.7e-09  Score=76.80  Aligned_cols=42  Identities=21%  Similarity=0.474  Sum_probs=33.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            477788888888888888888888888888877 567788775

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=76.43  Aligned_cols=42  Identities=19%  Similarity=0.407  Sum_probs=35.9

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478888888899999999999999999999888 677888884

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.3e-09  Score=76.60  Aligned_cols=42  Identities=17%  Similarity=0.361  Sum_probs=35.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            578888888888888888888888888888888 677888874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.79  E-value=1.2e-09  Score=80.70  Aligned_cols=51  Identities=16%  Similarity=0.184  Sum_probs=47.4

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCccee
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYK  165 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~  165 (512)
                      ++.|.....|..|+++|+++++|.|.+|++.|.....|.+|+++ +++++|.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            68899999999999999999999999999999999999999999 6788874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.7e-09  Score=76.87  Aligned_cols=42  Identities=19%  Similarity=0.404  Sum_probs=32.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|+|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            477777788888888888888888888888777 567777774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=2e-09  Score=74.86  Aligned_cols=40  Identities=20%  Similarity=0.450  Sum_probs=33.3

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            67788888888888888888888888888888 67788877

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.4e-09  Score=76.56  Aligned_cols=42  Identities=17%  Similarity=0.400  Sum_probs=34.1

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            578888888888888888888888888888888 567888874

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2.4e-09  Score=76.13  Aligned_cols=41  Identities=27%  Similarity=0.514  Sum_probs=31.4

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|..+..|++|+++ +++++|+|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            66777777888888888888888888888777 567777774

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=76.84  Aligned_cols=42  Identities=26%  Similarity=0.543  Sum_probs=35.8

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888885

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.6e-09  Score=77.02  Aligned_cols=42  Identities=21%  Similarity=0.435  Sum_probs=35.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|.++++|.|.+|++.|.....|++|+++ +++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 678888885

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.9e-09  Score=75.68  Aligned_cols=43  Identities=16%  Similarity=0.252  Sum_probs=39.7

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      .+.|.++++|.|++|++.|.++.+|++|+++|+             ++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT-------------REKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH-------------HCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC-------------CCCCCCCCCC
Confidence            467888999999999999999999999999998             7889999887

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.7e-09  Score=76.66  Aligned_cols=42  Identities=24%  Similarity=0.511  Sum_probs=32.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            477777888888888888888888888888777 677777774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-09  Score=74.92  Aligned_cols=40  Identities=23%  Similarity=0.493  Sum_probs=32.9

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            67788888888888888888888888888888 67788877

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.1e-09  Score=76.96  Aligned_cols=42  Identities=14%  Similarity=0.304  Sum_probs=36.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            588888889999999999999999999999888 678888884

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.3e-09  Score=76.14  Aligned_cols=39  Identities=15%  Similarity=0.144  Sum_probs=30.5

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      .++++|.|++|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         8 ~~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            8 TGEKPYKCDVC-------HKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCSEECSSS-------CCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCeeCccc-------CcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            36777888777       7888888888888888888888888776

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=5.7e-09  Score=74.97  Aligned_cols=42  Identities=24%  Similarity=0.434  Sum_probs=38.7

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      ..+..+++|.|++|++.|.+..+|++|+++|+             ++++|.|++|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   46 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHS-------------GEKPYSSGPS   46 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSC-------------SCCCCCSCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcC-------------CCCCccCCCC
Confidence            34667889999999999999999999999998             8899999999

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.76  E-value=2.6e-09  Score=74.10  Aligned_cols=40  Identities=15%  Similarity=0.359  Sum_probs=32.1

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceec
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKC  166 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C  166 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            67778888888888888888888888888877 67778877

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=6e-09  Score=73.65  Aligned_cols=42  Identities=19%  Similarity=0.428  Sum_probs=39.0

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      ..|.++++|+|++|++.|.++.+|++|+++|+             ++++|.|++|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~-------------~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD-------------GSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHS-------------CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHcc-------------CCCCCCCcCC
Confidence            45778899999999999999999999999998             8899999998

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=75.54  Aligned_cols=37  Identities=16%  Similarity=0.234  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSEC-------GKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCcc-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.5e-09  Score=77.06  Aligned_cols=42  Identities=17%  Similarity=0.281  Sum_probs=35.4

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +|+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578888888888888888888888888888888 677888885

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.4e-09  Score=75.89  Aligned_cols=37  Identities=14%  Similarity=0.201  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            9 GEKPYECSDC-------GKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             SCCSSCCSSS-------CCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCcCCCCC-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=75.91  Aligned_cols=37  Identities=22%  Similarity=0.301  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNEC-------GKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSS-------CCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2e-09  Score=76.30  Aligned_cols=37  Identities=22%  Similarity=0.301  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNEC-------GKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTTS-------CCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCeecccc-------CChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.1e-09  Score=74.13  Aligned_cols=41  Identities=15%  Similarity=0.239  Sum_probs=33.4

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      |+++|+++++|.|.+|++.|.....|++|+++ +++++|+|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            67788888888888888888888888888888 677888874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.9e-09  Score=75.68  Aligned_cols=37  Identities=24%  Similarity=0.255  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIEC-------GKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSS-------CCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCCC-------CCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.1e-09  Score=75.44  Aligned_cols=37  Identities=19%  Similarity=0.249  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNEC-------GKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSS-------CCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.7e-09  Score=75.82  Aligned_cols=37  Identities=16%  Similarity=0.229  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            9 GEKPFQCEEC-------GKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSBCCSSS-------CCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCcCCCCCCC-------CcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.3e-09  Score=75.47  Aligned_cols=37  Identities=16%  Similarity=0.238  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            9 GEKPYKCQVC-------GKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCSSS-------CCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCcccCCCCC-------CcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.4e-09  Score=74.62  Aligned_cols=42  Identities=21%  Similarity=0.423  Sum_probs=35.3

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ +++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            578888888888888888888888888888888 677888773

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.73  E-value=2.8e-09  Score=75.74  Aligned_cols=37  Identities=16%  Similarity=0.218  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            9 GEKPFECAEC-------GKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------SCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCEECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=74.94  Aligned_cols=37  Identities=19%  Similarity=0.300  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|.+|+++|++++||.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNEC-------GKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCCC-------ChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            8999999999       999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.4e-09  Score=75.16  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSEC-------QKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999975

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.72  E-value=1.9e-09  Score=79.67  Aligned_cols=52  Identities=13%  Similarity=0.160  Sum_probs=48.4

Q ss_pred             CcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccc
Q 010389           67 NKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWK  138 (512)
Q Consensus        67 gk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~  138 (512)
                      +|.|.....|..|+++|.             ++++|.|++|       ++.|.....|.+|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~-------------~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQ-------------SEQPATCPIC-------YAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHT-------------SSCCEECTTT-------CCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcC-------------CCCCccCCCC-------CcccCCHHHHHHHHHHhccCCCCC
Confidence            467888899999999998             8899999999       999999999999999999999984

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.5e-09  Score=75.26  Aligned_cols=37  Identities=24%  Similarity=0.274  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSEC-------GKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCcC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=4e-09  Score=74.87  Aligned_cols=37  Identities=24%  Similarity=0.267  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|..
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            9 GERHYECSEC-------GKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCC-------CcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.1e-09  Score=75.31  Aligned_cols=37  Identities=22%  Similarity=0.248  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|++++||.|.+
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            9 GEKPYNCEEC-------GKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECTTT-------CCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCccCCCC-------CCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            8899999999       999999999999999999999999975

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.4e-09  Score=75.25  Aligned_cols=37  Identities=19%  Similarity=0.261  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|++++||.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            9 GEKPYKCNEC-------GKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCTTCCSSS-------CCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCeECCCC-------CcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.2e-09  Score=75.42  Aligned_cols=38  Identities=16%  Similarity=0.260  Sum_probs=26.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+|
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSEC-------GKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSS-------CCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            6667777776       6777777777777777777777777666

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.72  E-value=4.1e-09  Score=73.20  Aligned_cols=36  Identities=19%  Similarity=0.245  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            7 GENPYECSEC-------GKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCccCCCc-------ChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            8899999999       99999999999999999999999994

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.4e-09  Score=75.33  Aligned_cols=42  Identities=21%  Similarity=0.400  Sum_probs=30.2

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhh-cC-Ccceecc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CG-TKEYKCN  167 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~-~kpy~C~  167 (512)
                      .|+++|+++++|.|.+|++.|.....|++|+++ ++ +++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            367777777777777777777777777777777 45 6777763

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.1e-09  Score=74.86  Aligned_cols=37  Identities=16%  Similarity=0.251  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|++++||+|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDVC-------GKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSSS-------CCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.1e-09  Score=74.80  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            9 GEKPYKCNEC-------GKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCTTT-------TCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCeECCcC-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.7e-09  Score=75.01  Aligned_cols=37  Identities=19%  Similarity=0.264  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.+
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            9 GEKPYECKVC-------SKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSS-------CCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.1e-09  Score=74.71  Aligned_cols=37  Identities=22%  Similarity=0.301  Sum_probs=35.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            9 GEKPYRCGEC-------GKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8899999999       999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.3e-09  Score=74.76  Aligned_cols=37  Identities=19%  Similarity=0.295  Sum_probs=35.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            9 GKKLFKCNEC-------KKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCBCTTT-------CCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCEECCcc-------CcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            8999999999       999999999999999999999999975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.6e-09  Score=72.83  Aligned_cols=36  Identities=14%  Similarity=0.179  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            7 GEKPYSCAEC-------KETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             SCCSCBCTTT-------CCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            8899999999       99999999999999999999999984

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.7e-09  Score=74.58  Aligned_cols=37  Identities=19%  Similarity=0.293  Sum_probs=35.3

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            9 GKKPYECKEC-------RKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CSCSCCCSSS-------CCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999963

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3e-09  Score=75.60  Aligned_cols=37  Identities=14%  Similarity=0.114  Sum_probs=35.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|.|..
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            9 GEKPYSCNVC-------GKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             SCCSEEETTT-------TEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCeECccc-------ChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.8e-09  Score=75.08  Aligned_cols=36  Identities=19%  Similarity=0.357  Sum_probs=35.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            9 GEKPYKCSDC-------GKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             SCCCEECSSS-------CCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCCEECccc-------CCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            8999999999       99999999999999999999999996

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=5.8e-09  Score=73.05  Aligned_cols=36  Identities=22%  Similarity=0.249  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            9 GMKPYVCNEC-------GKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSCCTTT-------CCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCeECCCC-------CCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            8899999999       99999999999999999999999995

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.7e-09  Score=73.74  Aligned_cols=37  Identities=19%  Similarity=0.269  Sum_probs=35.3

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|+|..
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            9 GEKPYECDVC-------RKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSSSCBCTTT-------CCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCc-------CchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8899999999       999999999999999999999999963

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=9.5e-09  Score=72.59  Aligned_cols=40  Identities=13%  Similarity=0.156  Sum_probs=32.3

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCC
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCS  143 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~  143 (512)
                      .++++|.|++|       ++.|..+..|.+|+++|+++++|.|.+|+
T Consensus         6 ~~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            6 SGEKPYSCPVC-------GLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             SSCCSSEETTT-------TEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCCCcCCCC-------CcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            36778888887       88888888888888888888888888875

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6e-09  Score=72.21  Aligned_cols=35  Identities=14%  Similarity=0.221  Sum_probs=34.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            8 GEKPYRCDQC-------GKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             SCCSBCCTTT-------TCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCeeCCCc-------cchhCCHHHHHHHHHHhCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.8e-09  Score=72.70  Aligned_cols=36  Identities=19%  Similarity=0.290  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            9 GEKPYECNEC-------QKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCCSEECTTT-------CCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCeECCCC-------CcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=2.3e-09  Score=85.50  Aligned_cols=64  Identities=22%  Similarity=0.426  Sum_probs=53.4

Q ss_pred             hhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCcceecc-CCCccCChhHHHHHHHHhcC
Q 010389          122 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       122 ~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      ..|..|+++|.++|+|.|.+|++.| ....|..|+...++++|.|. |++.|.+ ..|..|++.|..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHEDYCGARTELCGNCGRNVLV-KDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHHHHHHHCEEECSSSCCEEET-TGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHHhHcCCCceEcccCCCcCcH-HHHHHHHHHccC
Confidence            4678898889999999999999999 48889999833788999999 9998875 778899887764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=8.8e-09  Score=73.20  Aligned_cols=40  Identities=25%  Similarity=0.518  Sum_probs=24.1

Q ss_pred             hhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc
Q 010389          128 FCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN  167 (512)
Q Consensus       128 ~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~  167 (512)
                      +++|+++++|+|.+|++.|.....|++|+++ +++++|+|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4455666666666666666666666666666 455666653

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=5.5e-09  Score=73.29  Aligned_cols=36  Identities=14%  Similarity=0.178  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|..+..|.+|+++|+++++|+|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            9 GENPYECCEC-------GKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSCEETTT-------TEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCcCeeCCCC-------CCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            8899999999       99999999999999999999999995

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=1.6e-08  Score=71.35  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=38.0

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      ...|.++++|+|++|++.|.++.+|++|+++|+             ++++|.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT-------------GEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTS-------------SCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            456788999999999999999999999999998             888999863

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.4e-09  Score=73.86  Aligned_cols=37  Identities=11%  Similarity=0.123  Sum_probs=35.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccC-CccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG-EKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g-ekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|++ +++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            9 KEKCFKCNKC-------EKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CSCCEECSSS-------CCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCCCEECcCC-------CCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            8899999999       9999999999999999999 99999974

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=4.7e-09  Score=74.58  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=35.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.+
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            9 GERPFKCNEC-------GKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCSSS-------CCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            8999999999       999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=4.8e-09  Score=73.68  Aligned_cols=36  Identities=8%  Similarity=0.093  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            9 GENPFKCSKC-------DRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------SCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCCCeECCCC-------CchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            8899999999       99999999999999999999999994

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=7e-09  Score=72.06  Aligned_cols=35  Identities=17%  Similarity=0.236  Sum_probs=34.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            8 GEKPYPCEIC-------GTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             SSCCBCCSSS-------CCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCCEECCCC-------CCccCCHHHHHHHHHhcCCCCCCCC
Confidence            8899999999       9999999999999999999999998

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=8.6e-09  Score=72.36  Aligned_cols=36  Identities=8%  Similarity=0.123  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            9 TRKRYECSKC-------QATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSSEECTTT-------CCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCeECCCC-------CCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            8899999999       99999999999999999999999995

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.64  E-value=1.8e-08  Score=70.56  Aligned_cols=41  Identities=15%  Similarity=0.297  Sum_probs=37.3

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      +.|.++++|+|++|++.|.++.+|++|+++|+             ++++|.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTH-------------SDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHT-------------CTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhC-------------CCCCccCCC
Confidence            45778899999999999999999999999998             888999874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=2.2e-08  Score=71.38  Aligned_cols=44  Identities=25%  Similarity=0.353  Sum_probs=39.9

Q ss_pred             CccccCCCCCeecc--ccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           51 SPKTLLATNRFVCE--ICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        51 ~~~~~~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.+.|.++++|+|.  +|++.|.++..|++|+++|.             ++++|+|++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS-------------GVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC-------------CCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC-------------CCCCCCCCCC
Confidence            45678889999998  89999999999999999998             8899999887

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2e-08  Score=71.32  Aligned_cols=42  Identities=21%  Similarity=0.231  Sum_probs=38.2

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      .+.|.++++|+|++|++.|.++.+|++|+++|+             ++++|+|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT-------------GEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHS-------------SCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhC-------------CCCCCCCCC
Confidence            467888999999999999999999999999998             888999864

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=2e-08  Score=71.07  Aligned_cols=44  Identities=20%  Similarity=0.281  Sum_probs=39.6

Q ss_pred             cCccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           50 LSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        50 ~~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      .+.+.|.++++|.|++|++.|.++.+|++|+++|.             ++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT-------------GKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSC-------------CCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhC-------------CCCCCCCCC
Confidence            35677889999999999999999999999999998             888999864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1e-08  Score=73.21  Aligned_cols=38  Identities=11%  Similarity=0.133  Sum_probs=29.3

Q ss_pred             CCcceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCccccccCC
Q 010389           98 KKRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKC  142 (512)
Q Consensus        98 ~~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C  142 (512)
                      ++++|.|.  +|       ++.|..+..|++|+++|+++++|+|.+|
T Consensus         9 ~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGC-------GWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSC-------CCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCCC-------CCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777776  66       7777777777777777777777777776

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=7.2e-09  Score=85.31  Aligned_cols=58  Identities=16%  Similarity=0.214  Sum_probs=37.8

Q ss_pred             ccccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhc
Q 010389           52 PKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus        52 ~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      ...|.++++|+|++|++.|.+..+|++|+++|+             ++++|.|..|       .    ....|..|.+.|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht-------------~ekp~~C~~~-------~----~~~~~~~~~~~~   72 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHN-------------EEFQKRAKRQ-------E----RRKQLLSKQKYA   72 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHH-------------HHHHHHCCCC-------S----CCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhC-------------CCCCcccchh-------h----hHHHHHhhhccc
Confidence            455666777777777777777777777777776             6667777655       2    234455566665


Q ss_pred             cC
Q 010389          132 HG  133 (512)
Q Consensus       132 ~g  133 (512)
                      .+
T Consensus        73 ~~   74 (88)
T 1x6f_A           73 DG   74 (88)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.3e-09  Score=71.89  Aligned_cols=35  Identities=11%  Similarity=0.202  Sum_probs=34.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            8 GEKPYKCETC-------GARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             SSCSEECTTT-------CCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCCEeCCCc-------ChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            8999999999       9999999999999999999999998

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.63  E-value=8.9e-09  Score=71.33  Aligned_cols=35  Identities=9%  Similarity=0.089  Sum_probs=34.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|
T Consensus         8 ~~~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            8 GETPYLCGQC-------GKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCeECCCC-------CcccCCHHHHHHHhhhcCCCCCCCC
Confidence            8899999999       9999999999999999999999998

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=1.1e-08  Score=71.94  Aligned_cols=36  Identities=17%  Similarity=0.150  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|+|.
T Consensus         9 ~~~~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQEC-------GKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTTT-------CCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCeECCCC-------CcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            8899999999       99999999999999999999999995

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.2e-09  Score=73.19  Aligned_cols=36  Identities=11%  Similarity=0.088  Sum_probs=34.8

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            9 GEKPFQCKEC-------GMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCSEECSSS-------CCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCeeCccc-------ChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            8999999999       99999999999999999999999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=8.7e-09  Score=72.32  Aligned_cols=36  Identities=14%  Similarity=0.203  Sum_probs=34.7

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++++|.|.
T Consensus         9 ~~~~~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            9 DSKSYNCNEC-------GKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCEEETTT-------TEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCeECccc-------CcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            8899999999       99999999999999999999999984

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.8e-08  Score=70.83  Aligned_cols=36  Identities=17%  Similarity=0.068  Sum_probs=34.5

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            9 GEKPYECNEC-------GKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCSEECSSS-------CCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcCeECCCC-------CcccCchHHHHHHHhHhcCCCCCCCC
Confidence            8999999999       99999999999999999999999983

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=4.2e-08  Score=67.62  Aligned_cols=39  Identities=23%  Similarity=0.391  Sum_probs=35.6

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVC  104 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C  104 (512)
                      ..|.++++|+|++|++.|.+..+|++|+++|+             ++++|.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHT-------------GSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCC-------------CCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhC-------------CCCCcCC
Confidence            46778899999999999999999999999998             7888887

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.6e-08  Score=71.45  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=25.3

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.
T Consensus         9 ~~k~~~C~~C-------~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            9 GQKPFECTHC-------GKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             SCCSEEETTT-------TEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCcCccCCCC-------CCccCChHHHHHHHHHhCCCCCCCCC
Confidence            6667777776       67777777777777777777777765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.52  E-value=4.4e-08  Score=68.55  Aligned_cols=37  Identities=16%  Similarity=0.324  Sum_probs=25.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      ++++|.|++|       ++.|..+..|++|+++|+++++|.|.+
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNEC-------DCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSSS-------CCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCCC-------CCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            5666777766       677777777777777777777776653

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=7.1e-08  Score=76.71  Aligned_cols=41  Identities=24%  Similarity=0.447  Sum_probs=19.3

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ++.| ....|..|+ .|.++++|.|..|++.|. +..|..|+++
T Consensus        24 ~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A           24 DLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             ChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            4444 244444444 444455555555555443 2444555444

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=9.9e-08  Score=65.71  Aligned_cols=35  Identities=20%  Similarity=0.257  Sum_probs=22.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++++|.|++|       ++.|.....|++|+++|++++||.|
T Consensus         7 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            7 GQRVYECQEC-------GKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCEECSSS-------CCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCCeECCCC-------CCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5566666666       6666666666666666666666655

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.44  E-value=8.4e-09  Score=84.90  Aligned_cols=52  Identities=12%  Similarity=0.245  Sum_probs=42.9

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      .++++|.|++|       ++.|.....|++|+++|++++||+|..|.+    ...|..|.++|
T Consensus        21 ~~~kpy~C~~C-------~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~   72 (88)
T 1x6f_A           21 LQNSTYQCKHC-------DSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYA   72 (88)
T ss_dssp             CCCSCEECSSS-------CCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCC
T ss_pred             CCCCCCcCCCC-------CCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccc
Confidence            37889999999       999999999999999999999999987654    45666666663

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.35  E-value=2.1e-07  Score=62.35  Aligned_cols=33  Identities=18%  Similarity=0.418  Sum_probs=29.6

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      |+++|+++++|+|.+|++.|.....|.+|+++|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H   34 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHh
Confidence            788899999999999999999999999998874

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.35  E-value=2.4e-07  Score=63.10  Aligned_cols=37  Identities=22%  Similarity=0.486  Sum_probs=32.2

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVC  104 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C  104 (512)
                      |.++++|+|++|++.|.+..+|..|+++|.             ++++|.|
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~-------------~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHR-------------RDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTC-------------CSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcC-------------CCcccee
Confidence            356789999999999999999999999998             6777765

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.28  E-value=2.6e-07  Score=61.91  Aligned_cols=34  Identities=18%  Similarity=0.360  Sum_probs=22.7

Q ss_pred             hhccCCccccccCCCCcccChHHHhhhhhh-cCCc
Q 010389          129 CRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTK  162 (512)
Q Consensus       129 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~k  162 (512)
                      ++|+++++|.|.+|++.|.....|++|+++ ++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            456667777777777777777777777766 4443

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.23  E-value=6.6e-07  Score=60.83  Aligned_cols=36  Identities=14%  Similarity=0.195  Sum_probs=28.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCcccccc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCD  140 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~  140 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++++|.|.
T Consensus         3 ~~k~~~C~~C-------~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            3 PPRSYTCSFC-------KREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             CSSSEECTTT-------CCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCceECCCC-------CcccCCHHHHHHHHHHcCCCccceec
Confidence            5678888888       88888888888888888888888763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.19  E-value=8.4e-07  Score=58.25  Aligned_cols=26  Identities=35%  Similarity=0.651  Sum_probs=24.9

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|.|++|++.|....+|..|+++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~   26 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHE   26 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhC
Confidence            57999999999999999999999998

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=1.1e-06  Score=58.70  Aligned_cols=32  Identities=19%  Similarity=0.522  Sum_probs=29.7

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +.|.++++|+|++|++.|.++.+|.+|+++|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~   33 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNH   33 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHc
Confidence            45778899999999999999999999999997

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.18  E-value=1.3e-06  Score=57.39  Aligned_cols=30  Identities=27%  Similarity=0.505  Sum_probs=28.2

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |.++++|+|.+|++.|.+..+|++|+++|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~   31 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVH   31 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHc
Confidence            567889999999999999999999999997

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.17  E-value=1.4e-06  Score=57.38  Aligned_cols=30  Identities=30%  Similarity=0.533  Sum_probs=28.3

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |.++++|+|.+|++.|.++.+|.+|+++|+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   31 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            567899999999999999999999999997

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=1.4e-06  Score=68.12  Aligned_cols=42  Identities=24%  Similarity=0.292  Sum_probs=36.2

Q ss_pred             cccCCCCCeeccc--cCcccCChHHHHHHH-HhcCCCchhhcccccccCCcceeCCCC
Q 010389           53 KTLLATNRFVCEI--CNKGFQRDQNLQLHR-RGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        53 ~~~~~~k~f~C~~--Cgk~F~~~~~L~~H~-r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      ....++|||+|.+  |+|.|.+..+|++|+ ++|+             +++||.|-+-
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHT-------------gEKP~~~~~~   64 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHK-------------SDLPAFSAEV   64 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSS-------------SCCCCCCCSC
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCC-------------CCCCcccccc
Confidence            3456789999976  999999999999997 6898             8999998753

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.13  E-value=1e-06  Score=57.90  Aligned_cols=28  Identities=21%  Similarity=0.526  Sum_probs=15.3

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |+++++|.|.+|++.|.....|++|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~   29 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIRE   29 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHH
Confidence            3455555555555555555555555555

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.13  E-value=1.2e-06  Score=57.52  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=25.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKC  139 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C  139 (512)
                      ++|.|++|       ++.|.....|..|+++|+++++|.+
T Consensus         1 kp~~C~~C-------~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPEC-------PKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSS-------CCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCC-------CchhCCHHHHHHHHHHhCCCCCCCC
Confidence            46777777       7888888888888888888877753

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.12  E-value=1.4e-06  Score=68.05  Aligned_cols=26  Identities=8%  Similarity=-0.020  Sum_probs=13.9

Q ss_pred             CCccCChhhHHhhh-hhccCCcccccc
Q 010389          115 TRALGDLTGIKKHF-CRKHGEKKWKCD  140 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~-~~H~gekp~~C~  140 (512)
                      ++.|....+|++|+ ++|+++|||.|.
T Consensus        36 gKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           36 FAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            55555555555554 345555555553

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.12  E-value=1.3e-06  Score=57.65  Aligned_cols=28  Identities=21%  Similarity=0.589  Sum_probs=16.1

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |+++++|.|.+|++.|.....|.+|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~   29 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKV   29 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGG
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHH
Confidence            4455555555555555555555555555

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.3e-06  Score=58.67  Aligned_cols=32  Identities=13%  Similarity=0.190  Sum_probs=24.1

Q ss_pred             hhhccCCccccccCCCCcccChHHHhhh-hhhc
Q 010389          128 FCRKHGEKKWKCDKCSKKYAVQSDYKAH-SKVC  159 (512)
Q Consensus       128 ~~~H~gekp~~C~~C~k~F~~~~~L~~H-~~~h  159 (512)
                      |++|+++|||+|.+|++.|..+..|++| +++|
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H   33 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKH   33 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHT
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHc
Confidence            3567778888888888888888888888 6654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.05  E-value=1.6e-06  Score=57.95  Aligned_cols=30  Identities=17%  Similarity=0.254  Sum_probs=28.4

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      ++++|.|++|       ++.|.....|.+|+++|+++
T Consensus         8 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            8 GIKPFQCPDC-------DRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSSBCCTTT-------CCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCccCCCC-------CcccCcHHHHHHHHHHhccC
Confidence            8899999999       99999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=3.5e-06  Score=55.88  Aligned_cols=31  Identities=23%  Similarity=0.473  Sum_probs=29.0

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|..+++|+|.+|++.|....+|++|+++|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHS   33 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSS
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhc
Confidence            4678899999999999999999999999997

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.05  E-value=3.1e-06  Score=56.14  Aligned_cols=31  Identities=19%  Similarity=0.385  Sum_probs=28.7

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|..+++|+|.+|++.|..+..|.+|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHG   33 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhc
Confidence            4667899999999999999999999999997

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3.3e-06  Score=55.84  Aligned_cols=31  Identities=23%  Similarity=0.402  Sum_probs=28.9

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|..+++|+|.+|++.|..+..|.+|+++|.
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHT   33 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHcc
Confidence            4677899999999999999999999999997

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=3.1e-06  Score=52.30  Aligned_cols=27  Identities=22%  Similarity=0.491  Sum_probs=25.0

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +++|+|++|++.|.....|.+|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999984

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.01  E-value=2.7e-06  Score=52.85  Aligned_cols=27  Identities=30%  Similarity=0.699  Sum_probs=24.9

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +++|+|++|++.|....+|++|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999884

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.01  E-value=3.5e-06  Score=57.97  Aligned_cols=31  Identities=19%  Similarity=0.268  Sum_probs=28.1

Q ss_pred             ccCCCCCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+.+++||+|++  |+|.|.++.+|++|+++|+
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Ht   35 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHT   35 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            356789999986  9999999999999999997

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.5e-06  Score=56.23  Aligned_cols=32  Identities=22%  Similarity=0.403  Sum_probs=29.3

Q ss_pred             cccCCCCCeeccccCcccCCh-HHHHHHHHhcC
Q 010389           53 KTLLATNRFVCEICNKGFQRD-QNLQLHRRGHN   84 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~-~~L~~H~r~H~   84 (512)
                      +.|..+++|+|++|++.|.++ .+|.+|+++|.
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~   34 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHE   34 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHH
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcC
Confidence            357788999999999999999 99999999996

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.99  E-value=7.2e-06  Score=63.60  Aligned_cols=31  Identities=26%  Similarity=0.509  Sum_probs=26.8

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+.++++|+|.+|+|.|.++.+|++|+++|+
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Ht   37 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHG   37 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhC
Confidence            4667788999999999999999999999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=4.5e-06  Score=55.15  Aligned_cols=31  Identities=23%  Similarity=0.520  Sum_probs=28.6

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|..+++|.|++|++.|.++.+|.+|+++|+
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHT   33 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhc
Confidence            4567889999999999999999999999997

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=5.1e-06  Score=55.06  Aligned_cols=31  Identities=39%  Similarity=0.580  Sum_probs=28.3

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+..+++|+|++|++.|.....|++|+++|+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   33 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHT   33 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhC
Confidence            3567789999999999999999999999997

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.95  E-value=1.9e-06  Score=58.61  Aligned_cols=25  Identities=20%  Similarity=0.458  Sum_probs=14.8

Q ss_pred             cCCccccccCCCCcccChHHHhhhh
Q 010389          132 HGEKKWKCDKCSKKYAVQSDYKAHS  156 (512)
Q Consensus       132 ~gekp~~C~~C~k~F~~~~~L~~H~  156 (512)
                      .+||||+|.+|+|.|.++.+|++|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4556666666666666666666655

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=4.6e-06  Score=55.95  Aligned_cols=32  Identities=16%  Similarity=0.289  Sum_probs=29.3

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHH-HHhcC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLH-RRGHN   84 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H-~r~H~   84 (512)
                      +.|.++++|+|++|++.|..+.+|++| ++.|.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~   34 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHS   34 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHcc
Confidence            457788999999999999999999999 89886

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.94  E-value=4.5e-06  Score=56.07  Aligned_cols=30  Identities=23%  Similarity=0.680  Sum_probs=27.3

Q ss_pred             cCCCCCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |.++++|+|.  .|++.|.++.+|++|+++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   32 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhC
Confidence            4567899999  59999999999999999997

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.92  E-value=3.4e-06  Score=56.33  Aligned_cols=29  Identities=21%  Similarity=0.345  Sum_probs=18.4

Q ss_pred             hccCCccccccCCCCcccCh-HHHhhhhhh
Q 010389          130 RKHGEKKWKCDKCSKKYAVQ-SDYKAHSKV  158 (512)
Q Consensus       130 ~H~gekp~~C~~C~k~F~~~-~~L~~H~~~  158 (512)
                      +|+++++|.|.+|++.|... ..|++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~   32 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWA   32 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHH
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHh
Confidence            45566666666666666666 666666655

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.90  E-value=5.9e-06  Score=59.19  Aligned_cols=30  Identities=23%  Similarity=0.534  Sum_probs=28.3

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHH-hcC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRR-GHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~   84 (512)
                      |.++++|+|.+|++.|.++.+|++|++ +|.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            677899999999999999999999999 887

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.90  E-value=7.4e-06  Score=63.51  Aligned_cols=30  Identities=10%  Similarity=0.201  Sum_probs=14.6

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      .+++|+|.+|       ++.|..+..|++|+++|+++
T Consensus        10 ~ekpy~C~~C-------gK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A           10 EAGILPCGLC-------GKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCTTT-------CCCCSCHHHHHHHHHHHTTT
T ss_pred             CccCcCCCCC-------CCccCCHHHHHhhhhhhCCC
Confidence            3444555444       45555555555555554443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.90  E-value=6.2e-06  Score=51.21  Aligned_cols=27  Identities=26%  Similarity=0.673  Sum_probs=25.1

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +++|.|++|++.|.+...|.+|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcC
Confidence            368999999999999999999999985

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.89  E-value=5.7e-06  Score=56.21  Aligned_cols=27  Identities=33%  Similarity=0.685  Sum_probs=24.9

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHH
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRR   81 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r   81 (512)
                      +.++++|+|++|+|.|.++.+|++|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCC
Confidence            567899999999999999999999983

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.87  E-value=1.6e-06  Score=56.35  Aligned_cols=31  Identities=13%  Similarity=0.206  Sum_probs=22.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      ++|.|++|       ++.|.....|.+|+++|+++++|
T Consensus         1 kp~~C~~C-------~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPAC-------PKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSS-------CTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCC-------CcccCCHHHHHHHHHHHccCCCC
Confidence            35677777       77777777777777777777765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.83  E-value=1.1e-05  Score=50.38  Aligned_cols=27  Identities=19%  Similarity=0.550  Sum_probs=25.4

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~   27 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHD   27 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhc
Confidence            468999999999999999999999997

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.83  E-value=1e-05  Score=53.53  Aligned_cols=28  Identities=21%  Similarity=0.440  Sum_probs=13.0

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |+++++|.|.+|++.|.....|.+|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLV   31 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHH
Confidence            3444444444444444444444444444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.81  E-value=1.1e-05  Score=50.30  Aligned_cols=26  Identities=38%  Similarity=0.701  Sum_probs=24.7

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|.|++|++.|.....|..|+++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHE   26 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGG
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhc
Confidence            57999999999999999999999996

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=1.1e-05  Score=55.36  Aligned_cols=30  Identities=13%  Similarity=0.158  Sum_probs=17.0

Q ss_pred             CCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +++||+|++  |       ++.|..+..|++|+++|+++
T Consensus         6 gekp~~C~~~~C-------~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            6 SGILLKCPTDGC-------DYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCCCEECSSSSC-------CCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCC-------CCccCCHHHHHHHHHhcCCC
Confidence            455566554  4       55666666666666555543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=1.2e-05  Score=53.19  Aligned_cols=30  Identities=20%  Similarity=0.303  Sum_probs=15.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      ++++|.|++|       ++.|.....|++|+++|+++
T Consensus         6 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            6 SGKPFKCSLC-------EYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCSEECSSS-------SCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCccCCCC-------CchhCCHHHHHHHHHHhccC
Confidence            4445555554       55555555555555555443

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.80  E-value=9.9e-06  Score=54.31  Aligned_cols=33  Identities=9%  Similarity=0.236  Sum_probs=22.6

Q ss_pred             CCcceeCCC--CCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389           98 KKRVYVCPE--KSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus        98 ~~k~~~C~~--C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      ++++|.|++  |       ++.|.....|++|+++|+++++|
T Consensus         3 ~~k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGC-------GQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTT-------CCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCC-------CcccCCHHHHHHHHHHhCCCCCC
Confidence            556677763  6       77777777777777777776665

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=51.92  Aligned_cols=26  Identities=38%  Similarity=0.763  Sum_probs=24.2

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|++|++.|.+...|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999883

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.78  E-value=4.3e-06  Score=59.50  Aligned_cols=36  Identities=14%  Similarity=0.453  Sum_probs=27.2

Q ss_pred             HHhhhhhccCCcccccc--CCCCcccChHHHhhhhhhc
Q 010389          124 IKKHFCRKHGEKKWKCD--KCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       124 Lk~H~~~H~gekp~~C~--~C~k~F~~~~~L~~H~~~h  159 (512)
                      +..|+..|+++++|.|.  .|++.|.....|++|+++|
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H   43 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH   43 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHc
Confidence            34555668888888885  5888888888888888773

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.78  E-value=1.4e-05  Score=49.72  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=24.6

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|.|++|++.|.....|.+|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHS
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhc
Confidence            47999999999999999999999997

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.76  E-value=1.5e-05  Score=52.50  Aligned_cols=28  Identities=29%  Similarity=0.566  Sum_probs=13.8

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |.++++|.|.+|++.|.....|.+|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLL   31 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHH
Confidence            3444455555555555555555555444

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.76  E-value=1.4e-05  Score=52.75  Aligned_cols=28  Identities=25%  Similarity=0.547  Sum_probs=13.8

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |.++++|.|.+|++.|.....|.+|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~   31 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRK   31 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHH
Confidence            3444455555555555555555555444

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.73  E-value=1.7e-05  Score=52.43  Aligned_cols=30  Identities=10%  Similarity=0.276  Sum_probs=17.1

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      .+++|.|++|       ++.|.....|.+|+++|+++
T Consensus         6 ~~k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            6 SGKIFTCEYC-------NKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCCCEECTTT-------CCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCEECCCC-------CceeCCHHHHHHHHHHhCCC
Confidence            4455555555       55555555555555555544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.73  E-value=1.6e-05  Score=49.63  Aligned_cols=26  Identities=19%  Similarity=0.478  Sum_probs=24.6

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|.|++|++.|....+|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~   26 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHc
Confidence            47999999999999999999999997

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.70  E-value=2e-05  Score=52.70  Aligned_cols=30  Identities=27%  Similarity=0.551  Sum_probs=27.4

Q ss_pred             cCCCCCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +.++++|+|.+  |++.|.+..+|++|+++|.
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   34 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHT   34 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            56788999995  9999999999999999996

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.70  E-value=1.7e-05  Score=49.24  Aligned_cols=26  Identities=35%  Similarity=0.608  Sum_probs=24.6

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|.+|++.|....+|..|+++|.
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHS   26 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhc
Confidence            57999999999999999999999996

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.69  E-value=6.6e-06  Score=53.34  Aligned_cols=30  Identities=17%  Similarity=0.355  Sum_probs=26.9

Q ss_pred             ccccccCCCCcccChHHHhhhhhh-cCCcce
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV-CGTKEY  164 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy  164 (512)
                      |||.|.+|++.|.....|++|+++ +++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            589999999999999999999999 567776

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.68  E-value=2e-05  Score=48.29  Aligned_cols=25  Identities=28%  Similarity=0.748  Sum_probs=23.2

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|+|++|++.|.....|.+|+++|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcC
Confidence            5899999999999999999999996

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=1.8e-05  Score=49.02  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=24.6

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|.|++|++.|.....|..|+++|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~   26 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHI   26 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhc
Confidence            57999999999999999999999996

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.66  E-value=2.6e-05  Score=48.67  Aligned_cols=29  Identities=24%  Similarity=0.400  Sum_probs=19.9

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|++|       ++.|.....|.+|+++|+++|
T Consensus         2 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            2 KPYQCDYC-------GRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCEECTTT-------CCEESCHHHHHHHHHTTCCCC
T ss_pred             cCccCCCC-------CcccCCHHHHHHHHHHhccCC
Confidence            56777776       777777777777777776653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.64  E-value=2.5e-05  Score=48.63  Aligned_cols=29  Identities=17%  Similarity=0.328  Sum_probs=21.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|++|       ++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPEC-------PKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSS-------SCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCC-------CchhCCHHHHHHHHHHhcCCC
Confidence            46777777       777777777777777777654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.63  E-value=3.4e-05  Score=49.41  Aligned_cols=27  Identities=30%  Similarity=0.800  Sum_probs=25.3

Q ss_pred             CCCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +++|.|.  .|++.|.+..+|.+|+++|+
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~   29 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHcc
Confidence            3689999  89999999999999999997

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.80  E-value=7.5e-06  Score=51.27  Aligned_cols=26  Identities=31%  Similarity=0.638  Sum_probs=24.6

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|++|++.|....+|..|+++|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~   26 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHT   26 (29)
Confidence            47999999999999999999999996

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.61  E-value=3.4e-05  Score=49.10  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.5

Q ss_pred             CCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|+  +|++.|.+..+|++|+++|+
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~   28 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence            579998  99999999999999999997

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.76  E-value=8.6e-06  Score=51.15  Aligned_cols=26  Identities=35%  Similarity=0.623  Sum_probs=24.8

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|++|++.|....+|.+|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            68999999999999999999999996

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.59  E-value=3.3e-05  Score=47.95  Aligned_cols=27  Identities=30%  Similarity=0.546  Sum_probs=17.7

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +|.|++|       ++.|.....|.+|+++|+++
T Consensus         2 ~~~C~~C-------~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVC-------TRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCC-------CcccCCHHHHHHHHHHhcCC
Confidence            5666666       66666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.54  E-value=3.5e-05  Score=47.72  Aligned_cols=29  Identities=24%  Similarity=0.373  Sum_probs=21.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|++|       ++.|.....|..|+++|+++|
T Consensus         1 ~~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCREC-------GKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTT-------SCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCC-------CCccCChhHHHHHHHHhcCCC
Confidence            35777777       777777777777777777654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.54  E-value=3.8e-05  Score=47.85  Aligned_cols=28  Identities=25%  Similarity=0.396  Sum_probs=18.6

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|.|++|       ++.|.....|.+|+++|++++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYC-------EFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSS-------SCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCC-------CCccCCHHHHHHHHHHHccCC
Confidence            5666666       666766667777766666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.53  E-value=4.9e-05  Score=48.32  Aligned_cols=29  Identities=21%  Similarity=0.408  Sum_probs=19.9

Q ss_pred             cceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|+  +|       ++.|.....|++|+++|+++|
T Consensus         1 kp~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYC-------GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-------CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCC-------CcccCCHhHHHHHHHHhcCCC
Confidence            356675  56       777777777777777777654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.51  E-value=5.7e-05  Score=48.31  Aligned_cols=29  Identities=17%  Similarity=0.256  Sum_probs=18.0

Q ss_pred             cceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|+  .|       ++.|.....|.+|+++|++++
T Consensus         2 k~~~C~~~~C-------~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            2 RPYSCDHPGC-------DKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CSBCCCCTTC-------CCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCcCcCCCC-------CCccCCHHHHHHHHHHccCCC
Confidence            456666  55       666666666666666666543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.51  E-value=4.6e-05  Score=54.38  Aligned_cols=27  Identities=26%  Similarity=0.621  Sum_probs=15.8

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhh
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~  157 (512)
                      |+++|+|.|.+|++.|.....|++|++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~   28 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYA   28 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhh
Confidence            455555555555555555555555555

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=3.8e-05  Score=47.45  Aligned_cols=29  Identities=14%  Similarity=0.337  Sum_probs=18.9

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      ++|.|++|       ++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C-------~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHC-------DKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSC-------CCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCC-------CcccCCHHHHHHHHHHhccCC
Confidence            35666666       667777777777776666553

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.49  E-value=1.4e-05  Score=56.84  Aligned_cols=32  Identities=13%  Similarity=0.316  Sum_probs=29.1

Q ss_pred             cCCcceeCC--CCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           97 VKKRVYVCP--EKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        97 ~~~k~~~C~--~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .++++|.|+  .|       ++.|.....|++|+++|+++|
T Consensus        14 ~~~k~~~C~~~~C-------~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           14 MPDKTFECLFPGC-------TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTC-------CCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCCeECCCCCC-------CCccCCHHHHHHHHHHccCCC
Confidence            389999996  68       999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.49  E-value=5.3e-05  Score=50.58  Aligned_cols=20  Identities=20%  Similarity=0.458  Sum_probs=11.1

Q ss_pred             CCccCChhhHHhhhhhccCC
Q 010389          115 TRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      ++.|.....|++|+++|+++
T Consensus        17 ~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A           17 GKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEESCHHHHHHHHHHHHTT
T ss_pred             CCccCCHHHHHHHHHhcCCC
Confidence            55555555555555555544

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.48  E-value=6e-05  Score=46.70  Aligned_cols=26  Identities=27%  Similarity=0.689  Sum_probs=24.4

Q ss_pred             CCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+|.  .|++.|.....|.+|+++|+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            479999  99999999999999999985

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.47  E-value=5.3e-05  Score=47.42  Aligned_cols=26  Identities=31%  Similarity=0.759  Sum_probs=24.0

Q ss_pred             CCeeccccCcccCChHHHHHH-HHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLH-RRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H-~r~H~   84 (512)
                      ++|.|.+|++.|.+...|.+| +++|.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~   27 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHS   27 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHcc
Confidence            479999999999999999999 68886

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.58  E-value=1.8e-05  Score=49.46  Aligned_cols=28  Identities=21%  Similarity=0.323  Sum_probs=18.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|.|++|       ++.|.....|.+|+++|+++|
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMC-------GKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            5666666       666666666666666666543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.54  E-value=2.1e-05  Score=49.27  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=16.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      ++|.|++|       ++.|.....|.+|+++|+++
T Consensus         2 k~~~C~~C-------~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHC-------QRQFADPGALQRHVRIHTGE   29 (30)
Confidence            45566665       66666666666666666554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.39  E-value=8.4e-05  Score=45.83  Aligned_cols=18  Identities=6%  Similarity=0.132  Sum_probs=9.5

Q ss_pred             CCccCChhhHHhhhhhcc
Q 010389          115 TRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~  132 (512)
                      ++.|.....|.+|+++|+
T Consensus        10 ~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A           10 GKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CCEESCHHHHHHHHTTSC
T ss_pred             CcccCCHHHHHHHHHhcC
Confidence            555555555555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.36  E-value=0.0001  Score=44.96  Aligned_cols=19  Identities=11%  Similarity=0.237  Sum_probs=11.4

Q ss_pred             CCccCChhhHHhhhhhccC
Q 010389          115 TRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~g  133 (512)
                      ++.|.....|.+|+++|++
T Consensus         8 ~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            8 ERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CCBCSSHHHHHHHGGGTCC
T ss_pred             CCcCCCHHHHHHHHHHcCC
Confidence            5666666666666665554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.34  E-value=9.6e-05  Score=45.28  Aligned_cols=24  Identities=21%  Similarity=0.450  Sum_probs=12.4

Q ss_pred             ccccccCCCCcccChHHHhhhhhh
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ++|.|.+|++.|.....|.+|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRT   25 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHH
T ss_pred             cCccCCCcChhhCCHHHHHHHHHH
Confidence            445555555555555555555444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.33  E-value=7.9e-05  Score=45.89  Aligned_cols=24  Identities=17%  Similarity=0.429  Sum_probs=11.6

Q ss_pred             ccccccCCCCcccChHHHhhhhhh
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +||.|.+|++.|.....|++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~   25 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRG   25 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTT
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHh
Confidence            344444455555444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.30  E-value=0.00012  Score=45.70  Aligned_cols=27  Identities=22%  Similarity=0.290  Sum_probs=16.8

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhh-hhhccCC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKH-FCRKHGE  134 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H-~~~H~ge  134 (512)
                      +|.|++|       ++.|.....|.+| +++|+++
T Consensus         2 ~~~C~~C-------~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLC-------NRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTT-------CCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCccc-------CcccCChHHHHHHHHHHccCC
Confidence            4666666       6666666666666 5566554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.20  E-value=0.00034  Score=53.62  Aligned_cols=44  Identities=11%  Similarity=0.255  Sum_probs=23.6

Q ss_pred             CCccCChhhHHhhhh-hccCCc------ccccc--CCCCcccChHHHhhhhhh
Q 010389          115 TRALGDLTGIKKHFC-RKHGEK------KWKCD--KCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~-~H~gek------p~~C~--~C~k~F~~~~~L~~H~~~  158 (512)
                      ++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++.
T Consensus        10 ~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A           10 PESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            677777777777763 455443      34443  244444444444444443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.11  E-value=9.1e-05  Score=44.96  Aligned_cols=23  Identities=22%  Similarity=0.691  Sum_probs=12.1

Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ||.|.+|++.|.....|+.|+++
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~   24 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRH   24 (26)
Confidence            45555555555555555555544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.96  E-value=0.00025  Score=62.04  Aligned_cols=84  Identities=13%  Similarity=0.205  Sum_probs=51.5

Q ss_pred             CCCeeccccCcccCChHHHHHHH--HhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHR--RGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~--r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .+++.|.+|+..|.....++.|.  +.|...            .+.|.+. |+......++.|...    .|...+.+.+
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~------------v~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~   92 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANK------------VRRYMAI-NQGEDSVPAKKFKAA----PAEISDGEDR   92 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHH------------HHHHHHH-TTCCCCCSCCCCSCC----SSCCSSCCCT
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHH------------HHHHhcc-cCcccCCCCCccCCC----ccccccCCCC
Confidence            35799999999999999999998  666411            1222221 101000112333221    1333455667


Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      .|.|.+|.+.|.....|..|...
T Consensus        93 ~~~C~~C~~~f~s~~~~~~H~~g  115 (127)
T 1zu1_A           93 SKCCPVCNMTFSSPVVAESHYIG  115 (127)
T ss_dssp             TTEETTTTEECSSHHHHHHHHTS
T ss_pred             CeEcCCCCCEeCCHHHHHHHHCC
Confidence            78888888888888888888764

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.94  E-value=0.0012  Score=50.54  Aligned_cols=50  Identities=20%  Similarity=0.331  Sum_probs=42.0

Q ss_pred             ccccC--CCCcccChHHHhhhhhh-c-CC------cceecc---CCCccCChhHHHHHHHHhc
Q 010389          137 WKCDK--CSKKYAVQSDYKAHSKV-C-GT------KEYKCN---CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       137 ~~C~~--C~k~F~~~~~L~~H~~~-h-~~------kpy~C~---Cgk~F~~~~~L~~H~~~hh  186 (512)
                      |.|..  |++.|.....|..|+.. | +.      ..|.|.   |++.+.....|.+|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            45655  99999999999999865 5 22      379997   9999999999999998865

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=96.82  E-value=0.0005  Score=42.27  Aligned_cols=18  Identities=17%  Similarity=0.231  Sum_probs=11.2

Q ss_pred             CCccCChhhHHhhhhhcc
Q 010389          115 TRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~  132 (512)
                      ++.|.....|.+|+++|+
T Consensus        11 ~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A           11 GRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEESSHHHHHHHHGGGT
T ss_pred             cCccCCHHHHHHHHHHhC
Confidence            666666666666666654

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.57  E-value=0.0032  Score=54.58  Aligned_cols=32  Identities=16%  Similarity=0.289  Sum_probs=26.1

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhh
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +-..|+|+++|.|.+|+|.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34557888888898899988888888888876

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.81  E-value=0.008  Score=52.07  Aligned_cols=33  Identities=24%  Similarity=0.332  Sum_probs=28.9

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhc
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      ....+++.++|.|.+|+|.|.+..+|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345677889999999999999999999998765

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.70  E-value=0.016  Score=52.75  Aligned_cols=80  Identities=18%  Similarity=0.476  Sum_probs=57.8

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChh
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRD  176 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~  176 (512)
                      .....|+.-+|     ...+ ....|..|. ..-.-++..|..|+..+ .+..|..|+.. ...+.-.|. |+..|... 
T Consensus        80 ~l~v~C~n~GC-----~~~~-~~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-  150 (170)
T 3hcs_A           80 SLMVKCPNEGC-----LHKM-ELRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-  150 (170)
T ss_dssp             TSEEECCSTTC-----CCEE-EGGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-
T ss_pred             hcccCCCCCCC-----Ccee-cHhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-
Confidence            34566754333     5544 456788887 34456788999999988 66688999975 888899999 99988665 


Q ss_pred             HHHHHHHHhcC
Q 010389          177 SFITHRAFCDM  187 (512)
Q Consensus       177 ~L~~H~~~hh~  187 (512)
                      .|..|...+..
T Consensus       151 ~l~~H~~~~~~  161 (170)
T 3hcs_A          151 DKEIHDQNCPL  161 (170)
T ss_dssp             GHHHHHTTCCC
T ss_pred             HHHhHHHhCcC
Confidence            57888866544

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.53  E-value=0.011  Score=51.61  Aligned_cols=74  Identities=14%  Similarity=0.152  Sum_probs=52.4

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhh--hhccC-CccccccCC------CCcccChHHHhhhhhh-cCCcceecc-
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHF--CRKHG-EKKWKCDKC------SKKYAVQSDYKAHSKV-CGTKEYKCN-  167 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~--~~H~g-ekp~~C~~C------~k~F~~~~~L~~H~~~-h~~kpy~C~-  167 (512)
                      .+++.|.+|       ...|.+...+..|.  +.|.. .+.|.+..+      ++.|...    .|... ...+.|.|. 
T Consensus        30 ~~~~~C~~C-------~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~C~~   98 (127)
T 1zu1_A           30 FSDTQCKVC-------SAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAA----PAEISDGEDRSKCCPV   98 (127)
T ss_dssp             BCSSEETTT-------TEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCC----SSCCSSCCCTTTEETT
T ss_pred             CCCCcCcCC-------CCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCC----ccccccCCCCCeEcCC
Confidence            467899999       99999999999999  66653 255655321      2222211    12222 456789999 


Q ss_pred             CCCccCChhHHHHHHH
Q 010389          168 CGAVFSRRDSFITHRA  183 (512)
Q Consensus       168 Cgk~F~~~~~L~~H~~  183 (512)
                      |++.|.....|..|..
T Consensus        99 C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           99 CNMTFSSPVVAESHYI  114 (127)
T ss_dssp             TTEECSSHHHHHHHHT
T ss_pred             CCCEeCCHHHHHHHHC
Confidence            9999999999999973

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.22  E-value=0.024  Score=40.22  Aligned_cols=25  Identities=28%  Similarity=0.444  Sum_probs=22.9

Q ss_pred             CCeeccccCcccCChHHHHHHHHhc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      .+|.|+.|++.|.....|+.||+.-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            6899999999999999999999843

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.67  E-value=0.072  Score=37.76  Aligned_cols=21  Identities=19%  Similarity=0.544  Sum_probs=10.1

Q ss_pred             ccccCCCCcccChHHHhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~  157 (512)
                      |.|+.|++.|.....|++||+
T Consensus        13 ~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           13 KICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHH
T ss_pred             eeCCcccccccchHHHHhhhh
Confidence            444444444444444444444

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.42  E-value=0.14  Score=46.35  Aligned_cols=57  Identities=21%  Similarity=0.364  Sum_probs=43.9

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhh-cCCcc
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGTKE  163 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~kp  163 (512)
                      .-++..|+.|       +..+ .+..|..|+......+.-.|.+|+..|.. ..|..|..+ .++.+
T Consensus       107 ~~~~v~C~~C-------~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          107 EFALMDCPQC-------QRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALE  164 (170)
T ss_dssp             TTSEEECTTT-------CCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC---
T ss_pred             CceeeECCCC-------ChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhh
Confidence            4466788877       7776 77889999988888899999999998754 577999988 56544

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=85.55  E-value=0.2  Score=38.89  Aligned_cols=49  Identities=16%  Similarity=0.432  Sum_probs=28.6

Q ss_pred             CCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhcCCccee
Q 010389          115 TRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKEYK  165 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kpy~  165 (512)
                      +..+ .+..|..|+......+...|.+|+..|.. ..|..|.......+-.
T Consensus        24 ~~~v-~r~~l~~H~~~~C~~r~v~C~~C~~~~~~-~~l~~H~~~Cp~~~v~   72 (76)
T 2yuc_A           24 PMKL-SRRDLPAHLQHDCPKRRLKCEFCGCDFSG-EAYESHEGMCPQESSG   72 (76)
T ss_dssp             SCBC-CSSSSTTTTTTSCTTSCCCCSSSCCCCCH-HHHHHTTTSCTTSSCC
T ss_pred             cHHh-hHhHHHhhCHhhCCCcceECCCCCCccCH-HHHHHHHhHCCCCccC
Confidence            5444 34556777665556666777777777653 4566776444433333

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=84.89  E-value=0.57  Score=30.99  Aligned_cols=25  Identities=24%  Similarity=0.494  Sum_probs=22.5

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|.|++|-+.|.+...|..|....|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            5999999999999999999986654

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=82.15  E-value=0.35  Score=37.50  Aligned_cols=57  Identities=26%  Similarity=0.613  Sum_probs=41.5

Q ss_pred             HHhhhhhccCCccccc-cCCCCcccChHHHhhhhhh-cCCcceecc-CCCccCChhHHHHHHH
Q 010389          124 IKKHFCRKHGEKKWKC-DKCSKKYAVQSDYKAHSKV-CGTKEYKCN-CGAVFSRRDSFITHRA  183 (512)
Q Consensus       124 Lk~H~~~H~gekp~~C-~~C~k~F~~~~~L~~H~~~-h~~kpy~C~-Cgk~F~~~~~L~~H~~  183 (512)
                      |..|+ .+..-++-.| ..|+..+. +..|..|+.. ...+...|. |+..|.+. .|..|..
T Consensus         5 l~~H~-~~C~~~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~~   64 (76)
T 2yuc_A            5 SSGHL-NTCSFNVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHEG   64 (76)
T ss_dssp             CSCCC-CCCCCSCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTTT
T ss_pred             HHHHH-HHCCCcccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCHH-HHHHHHh
Confidence            44554 3344566789 67998875 4688999985 778899999 99999754 4677753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.97  E-value=0.86  Score=30.10  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=21.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      .|.||+|       .+.|.+...|..|....|.
T Consensus         5 GFiCP~C-------~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQC-------MKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTT-------CCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHH-------HHHcCCHHHHHHHHHhccc
Confidence            4889988       8889999999999876553

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	512
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.004
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 3e-05
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%)

Query: 134 EKKWKCDKCSKKYAVQSDYKAHSKVCGT-KEYKCN-CGAVFSRRDSFITHR 182
           +K + C  C K +  +S    H  +    + Y C  CG  F  +   + H 
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 50

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 7/26 (26%), Positives = 10/26 (38%)

Query: 162 KEYKCNCGAVFSRRDSFITHRAFCDM 187
           K Y C CG  F+ +     H +    
Sbjct: 2   KLYPCQCGKSFTHKSQRDRHMSMHLG 27

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 130 RKH-GEKKWKCDKCSKKYAVQSDYKAHSKVCGTKE 163
           R H GEK ++C  C  ++      K H     T+ 
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 61 FVCEICNKGFQRDQNLQLHRRGHN 84
          + C  C+K F++ Q L +H + ++
Sbjct: 9  YACSHCDKTFRQKQLLDMHFKRYH 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	512
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.4
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.89
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.88
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.88
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.86
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.82
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.71
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.68
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.68
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.66
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.65
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.63
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.62
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.62
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.62
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.56
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.53
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.51
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.5
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.49
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.48
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.48
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.38
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.35
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.3
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.21
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.19
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.19
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.18
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.15
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.11
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.06
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.04
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.01
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.01
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.99
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.97
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.63
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.51
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.5
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.4
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.34
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.24
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.05
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.05
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.91
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.88
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.79
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.71
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.71
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.7
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.64
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.62
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.6
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.59
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.56
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.54
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.49
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.45
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.42
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.42
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.41
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.4
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.31
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.28
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.27
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.19
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.14
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.04
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.86
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.83
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.76
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.61
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.32
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.24
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.16
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.05
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.05
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.03
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.86
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.84
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.82
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.71
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	94.56
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	93.46
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.73
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.64
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.26
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	91.83
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.81
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.05
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.74
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.38
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	90.13
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	89.16
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.33
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.83
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.5
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.23
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.07
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.96
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.48
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	83.94
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	83.77
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.44
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.4
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	83.38
d1y0jb1	36	U-shaped transcription factor, different fingers {	81.18
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	80.37

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=9.9e-14  Score=101.87  Aligned_cols=52  Identities=19%  Similarity=0.305  Sum_probs=30.5

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhc
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      |+|+|+ ||+.|..+.+|++|+++|.             ++++|.|++|       ++.|.....|.+||++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht-------------~ekpy~C~~C-------~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHL-------------GLRPYGCGVC-------GKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHS-------------CCCSEECTTT-------SCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccc-------------cccCCcCCCc-------CCEecCHHHHHHHHhcC
Confidence            556663 6666666666666666665             5555555555       55555555555555554

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=6.1e-14  Score=103.02  Aligned_cols=53  Identities=19%  Similarity=0.522  Sum_probs=46.7

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      +|+|.| .|       ++.|..+..|.+|+++|+++|||.|.+|++.|.....|.+|+++|
T Consensus         1 EK~y~C-~C-------gk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QC-------GKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TT-------SCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CC-------CCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            578999 48       899999999999999999999999999999999999999998764

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=4.6e-10  Score=76.12  Aligned_cols=37  Identities=30%  Similarity=0.658  Sum_probs=33.3

Q ss_pred             CCCCeeccccCcccCChHHHHHHHH-hcCCCchhhcccccccCCcceeCCC
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRR-GHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r-~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      .+|||+|++|+|.|.+..+|++|++ +|.             +++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht-------------~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT-------------SERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC-------------CCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC-------------CCcCcCCcC
Confidence            3689999999999999999999986 687             899999974

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4e-10  Score=76.45  Aligned_cols=37  Identities=16%  Similarity=0.383  Sum_probs=32.0

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhh-hccCCccccccC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFC-RKHGEKKWKCDK  141 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~-~H~gekp~~C~~  141 (512)
                      .+|||+|.+|       ++.|....+|++||+ +|++||||+|++
T Consensus         2 ~~Kpy~C~~C-------gk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSC-------GKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSS-------CCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCC-------CCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4688999998       999999999999986 699999999975

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=3.5e-10  Score=76.06  Aligned_cols=33  Identities=18%  Similarity=0.418  Sum_probs=30.7

Q ss_pred             hhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389          127 HFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       127 H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      |.|+|++||||+|.+|+|.|.++.+|++|+++|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H   34 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH   34 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGG
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcC
Confidence            788999999999999999999999999999886

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.7e-10  Score=76.45  Aligned_cols=34  Identities=24%  Similarity=0.631  Sum_probs=31.6

Q ss_pred             hhhhhccCCccccccCCCCcccChHHHhhhhhhc
Q 010389          126 KHFCRKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       126 ~H~~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      +|+++|+++|||+|.+|+|.|....+|.+|+++|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~H   35 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH   35 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccC
Confidence            6899999999999999999999999999999984

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7e-10  Score=74.09  Aligned_cols=35  Identities=23%  Similarity=0.435  Sum_probs=28.7

Q ss_pred             hhccCCccccccCCCCcccChHHHhhhhhhcCCcc
Q 010389          129 CRKHGEKKWKCDKCSKKYAVQSDYKAHSKVCGTKE  163 (512)
Q Consensus       129 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~h~~kp  163 (512)
                      |+|+|||||+|.+|++.|..+..|++|+++|.+..
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            57889999999999999999999999988854443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.71  E-value=2.5e-09  Score=70.63  Aligned_cols=30  Identities=20%  Similarity=0.523  Sum_probs=22.2

Q ss_pred             ccCCccccccCCCCcccChHHHhhhhhhcC
Q 010389          131 KHGEKKWKCDKCSKKYAVQSDYKAHSKVCG  160 (512)
Q Consensus       131 H~gekp~~C~~C~k~F~~~~~L~~H~~~h~  160 (512)
                      |+|||||+|.+|+|.|.++.+|++|+++|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            567777777777777777777777777754

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.6e-09  Score=71.18  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=26.8

Q ss_pred             hhccCCccccccCCCCcccChHHHhhhhhh-cCC
Q 010389          129 CRKHGEKKWKCDKCSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       129 ~~H~gekp~~C~~C~k~F~~~~~L~~H~~~-h~~  161 (512)
                      |+|+|||||+|.+|++.|.++.+|++|++. |++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            468888888888888888888888888766 543

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.6e-09  Score=70.36  Aligned_cols=35  Identities=20%  Similarity=0.594  Sum_probs=30.9

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccccccC
Q 010389          102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKWKCDK  141 (512)
Q Consensus       102 ~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~~C~~  141 (512)
                      |.|++.+|     ++.|..+..|++|+++|++||||+|++
T Consensus         2 f~C~~~~C-----~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPAC-----GKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTT-----CCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCC-----CCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67777444     999999999999999999999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=4.9e-09  Score=69.21  Aligned_cols=30  Identities=30%  Similarity=0.533  Sum_probs=28.8

Q ss_pred             cCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           55 LLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        55 ~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++++|||+|++|+|.|.++.+|++|+++|.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht   31 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHT   31 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGT
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccC
Confidence            678999999999999999999999999997

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=7e-09  Score=69.11  Aligned_cols=32  Identities=25%  Similarity=0.565  Sum_probs=30.6

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|+++|||+|.+|+|.|..+.+|++|+++|+
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~   32 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH   32 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTT
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccC
Confidence            47899999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=4.8e-09  Score=68.30  Aligned_cols=30  Identities=30%  Similarity=0.558  Sum_probs=22.7

Q ss_pred             hccCCccccccCCCCcccChHHHhhhhhhc
Q 010389          130 RKHGEKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       130 ~H~gekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      +|++||||+|.+|+|.|.....|++|+++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~H   30 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH   30 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhcccc
Confidence            467777777777777777777777777773

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=9.6e-09  Score=66.85  Aligned_cols=31  Identities=29%  Similarity=0.497  Sum_probs=29.6

Q ss_pred             ccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           54 TLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        54 ~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|+++|||+|.+|+|.|..+.+|.+|+++|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Ht   31 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHT   31 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGG
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccC
Confidence            4789999999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=9.6e-09  Score=68.87  Aligned_cols=34  Identities=32%  Similarity=0.670  Sum_probs=32.0

Q ss_pred             CccccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           51 SPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        51 ~~~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +.+.|+++|||+|.+|++.|.++.+|++|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            4678999999999999999999999999999995

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.62  E-value=6.1e-09  Score=65.16  Aligned_cols=27  Identities=37%  Similarity=0.797  Sum_probs=25.9

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|||+|++|+|.|.++.+|.+|+|+|+
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CcCccCCCCcCEecccccccccCCCcc
Confidence            589999999999999999999999996

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=3.3e-09  Score=71.65  Aligned_cols=30  Identities=27%  Similarity=0.515  Sum_probs=29.3

Q ss_pred             CCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           98 KKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        98 ~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +++||.|++|       +|.|....+|.+|+++|+||
T Consensus         9 ~ekpy~C~~C-------gK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           9 ERRRYKCDEC-------GKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CSCSSBCSSS-------CCBCSCHHHHHHHHTTTCCS
T ss_pred             CCCCEecCCC-------CceeeCHHHHHHhCccCCCC
Confidence            9999999999       99999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.56  E-value=1.6e-08  Score=63.86  Aligned_cols=26  Identities=42%  Similarity=1.003  Sum_probs=25.2

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++|+|.|.+..+|++|+++|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HT   26 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHT   26 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTT
T ss_pred             CcCCCCCCCCCCCCchHcccccCccc
Confidence            68999999999999999999999998

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.3e-08  Score=66.52  Aligned_cols=32  Identities=19%  Similarity=0.486  Sum_probs=29.3

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +.|+++|||+|++|++.|.++.+|++|++.|+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            47899999999999999999999999987655

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1.8e-08  Score=61.55  Aligned_cols=26  Identities=31%  Similarity=0.637  Sum_probs=24.8

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++|||.|....+|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            69999999999999999999999984

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.50  E-value=2.5e-08  Score=62.95  Aligned_cols=29  Identities=34%  Similarity=0.599  Sum_probs=22.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      |||.|++|       ++.|.....|++||++|+|||
T Consensus         1 kp~~C~~C-------~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVC-------TRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTT-------CCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCC-------CCCCCCchHcccccCcccCCC
Confidence            46777777       777777777777777777775

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.49  E-value=8.6e-09  Score=72.79  Aligned_cols=39  Identities=18%  Similarity=0.366  Sum_probs=30.0

Q ss_pred             hhHHhhhhhccCCccccccC--CCCcccChHHHhhhhhh-cCC
Q 010389          122 TGIKKHFCRKHGEKKWKCDK--CSKKYAVQSDYKAHSKV-CGT  161 (512)
Q Consensus       122 ~~Lk~H~~~H~gekp~~C~~--C~k~F~~~~~L~~H~~~-h~~  161 (512)
                      ..|.+|++ |++||||+|.+  |+|.|.+.++|++|+++ +++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            35667774 88888888877  88888888888888888 444

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.9e-08  Score=62.60  Aligned_cols=26  Identities=35%  Similarity=0.756  Sum_probs=25.2

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||.|++|+|.|.++.+|.+|+|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Ht   26 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQ   26 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGG
T ss_pred             CCEECCcCCCeecchHHhhhhcCccC
Confidence            68999999999999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=2.7e-08  Score=66.08  Aligned_cols=33  Identities=33%  Similarity=0.708  Sum_probs=31.0

Q ss_pred             eeccc--cCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCC
Q 010389           61 FVCEI--CNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPE  106 (512)
Q Consensus        61 f~C~~--Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~  106 (512)
                      |.|++  |+|.|.++.+|++|+++|+             +++||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Ht-------------gekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHS-------------DTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHH-------------TSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeC-------------CCCCEeCCC
Confidence            78987  9999999999999999998             999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=6.9e-08  Score=60.83  Aligned_cols=29  Identities=21%  Similarity=0.457  Sum_probs=21.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      |||.|++|       ++.|..+.+|.+|+++|++||
T Consensus         1 Kpy~C~~C-------~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPEC-------PKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTT-------TCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcC-------CCeecchHHhhhhcCccCCcC
Confidence            46777777       777777777777777777765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.35  E-value=1.9e-08  Score=70.97  Aligned_cols=34  Identities=15%  Similarity=0.405  Sum_probs=30.2

Q ss_pred             cCCcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           97 VKKRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        97 ~~~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .++++|+|++-+|     ++.|..+.+|++|+++|++||
T Consensus        14 ~gekpy~C~~~~C-----~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          14 MPDKTFECLFPGC-----TKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTC-----CCEECSSSSHHHHHHHHTTTC
T ss_pred             cCCCCeECCcCCC-----CccccCchHHHhhcccccCCC
Confidence            3999999988222     999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=8.1e-08  Score=59.94  Aligned_cols=27  Identities=15%  Similarity=0.329  Sum_probs=14.9

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      |||+|++|       ++.|..+.+|++|+++|+|
T Consensus         2 KPy~C~~C-------~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRIC-------MRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTT-------CCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCC-------cCEecccccccccCCCccC
Confidence            45555555       5555555555555555543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.7e-07  Score=59.90  Aligned_cols=31  Identities=23%  Similarity=0.499  Sum_probs=25.6

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +||+|++-+|     ++.|....+|++|+++|++||
T Consensus         1 kpf~C~~~~C-----~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYC-----GKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTC-----CCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCC-----CcCcCChhHhhhhcCcccccC
Confidence            5788876544     999999999999999999886

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=1.9e-07  Score=56.87  Aligned_cols=23  Identities=26%  Similarity=0.687  Sum_probs=10.6

Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ||+|.+|||.|.....|.+|+|+
T Consensus         2 Py~C~eCgK~F~~~s~L~~Hqri   24 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRI   24 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccC
Confidence            44444444444444444444443

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=2.9e-07  Score=58.34  Aligned_cols=30  Identities=13%  Similarity=0.397  Sum_probs=24.3

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      |||+|++-+|     +++|....+|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGC-----GKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTC-----CCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCC-----CceECcHHHcCccccccCCC
Confidence            5788887444     88888888888888888876

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4e-07  Score=57.62  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=25.0

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~Ht   28 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHT   28 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCc
Confidence            6899999  9999999999999999997

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=3.9e-07  Score=57.67  Aligned_cols=30  Identities=23%  Similarity=0.534  Sum_probs=22.6

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      |||+|++-+|     ++.|....+|++|+++|+||
T Consensus         1 kp~~C~~~gC-----gk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGC-----RKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTC-----CCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCC-----CceECChhHhhhhcCcCcCC
Confidence            5778877433     88888888888888888775

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=4.1e-07  Score=57.63  Aligned_cols=26  Identities=42%  Similarity=0.740  Sum_probs=24.8

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HT   28 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHT   28 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred             CCccCCCCCCCceECcHHHcCccccccC
Confidence            6899988  9999999999999999997

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=6.8e-07  Score=57.41  Aligned_cols=18  Identities=11%  Similarity=0.098  Sum_probs=8.7

Q ss_pred             CCccCChhhHHhhhhhcc
Q 010389          115 TRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~  132 (512)
                      ++.|....+|++|+++|+
T Consensus        12 ~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_          12 DKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCCBSSSHHHHHHHGGGT
T ss_pred             CCeeCCHHHHHHHhhhcc
Confidence            444444444444444443

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.11  E-value=7e-07  Score=57.34  Aligned_cols=27  Identities=30%  Similarity=0.828  Sum_probs=25.7

Q ss_pred             CCCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|||.|++  |+|.|.+..+|++|+++|.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            58999998  9999999999999999997

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=5.4e-07  Score=55.97  Aligned_cols=26  Identities=38%  Similarity=0.760  Sum_probs=24.5

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899998  9999999999999999994

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.2e-06  Score=55.94  Aligned_cols=26  Identities=42%  Similarity=0.898  Sum_probs=24.3

Q ss_pred             CCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|+  .|+|.|.+..+|++|+++|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Ht   28 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHT   28 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccc
Confidence            689996  59999999999999999998

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.3e-06  Score=50.84  Aligned_cols=25  Identities=40%  Similarity=0.805  Sum_probs=23.5

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |++|+.|+|.|.++..|+.|||.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            5789999999999999999999996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.01  E-value=9.3e-07  Score=55.44  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=24.7

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|++  |+|.|.+..+|++|+|+|+
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccC
Confidence            6899988  9999999999999999996

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.99  E-value=1.2e-06  Score=52.67  Aligned_cols=26  Identities=38%  Similarity=0.814  Sum_probs=16.8

Q ss_pred             CccccccCCCCcccChHHHhhhhhhc
Q 010389          134 EKKWKCDKCSKKYAVQSDYKAHSKVC  159 (512)
Q Consensus       134 ekp~~C~~C~k~F~~~~~L~~H~~~h  159 (512)
                      ||||.|++||+.|.+....++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46666666666666666666666654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=2e-06  Score=51.75  Aligned_cols=27  Identities=30%  Similarity=0.698  Sum_probs=25.5

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|||.|++||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999999995

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=1.3e-06  Score=54.68  Aligned_cols=29  Identities=31%  Similarity=0.720  Sum_probs=22.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      |||+|++.+|     +|.|.+..+|++|+++|+|
T Consensus         1 Kp~~C~~~gC-----~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESC-----DRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCC-----CcEECchhHhhhhcCccCC
Confidence            5788887655     8888888888888888875

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=3.2e-06  Score=52.40  Aligned_cols=28  Identities=32%  Similarity=0.713  Sum_probs=18.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      |||+|++-+|     +|.|....+|++|+++|+
T Consensus         1 rPf~C~~~gC-----~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGC-----NKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTC-----CCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCc-----CCcCCCHHHHHHHHhhcc
Confidence            4666666444     777777777777777664

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.3e-05  Score=48.89  Aligned_cols=27  Identities=26%  Similarity=0.765  Sum_probs=25.6

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|||.|++|+..|+++..+..|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshd   27 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHD   27 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCCcccchHHHHhhccccceEeeeccc
Confidence            589999999999999999999999995

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=2.6e-05  Score=45.33  Aligned_cols=18  Identities=11%  Similarity=0.198  Sum_probs=9.2

Q ss_pred             CCccCChhhHHhhhhhcc
Q 010389          115 TRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       115 ~k~F~~~~~Lk~H~~~H~  132 (512)
                      ++.|.++..|+.||+.|+
T Consensus         8 ~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           8 GKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             TBCCCCHHHHHHHGGGCC
T ss_pred             hhHhcchhHHHHHhhccC
Confidence            555555555555555544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=3.3e-05  Score=48.09  Aligned_cols=27  Identities=33%  Similarity=0.656  Sum_probs=24.7

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+...|++|||.|....+|.+|...|.
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs   29 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHS   29 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccC
Confidence            356789999999999999999999998

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=4.4e-05  Score=46.42  Aligned_cols=29  Identities=34%  Similarity=0.713  Sum_probs=24.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      |||.|.+.+|     .|+|.+.+.|++||+.+||
T Consensus         1 KPY~Ck~~gC-----~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGC-----TKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTT-----CCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCC-----CcccCCHHHHHHHHHhhCC
Confidence            5788888866     8999999999999988765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=5e-05  Score=47.28  Aligned_cols=31  Identities=19%  Similarity=0.381  Sum_probs=26.0

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCccc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEKKW  137 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gekp~  137 (512)
                      +...|+.|       +|.|.+-..|.+|...|.+||||
T Consensus         4 k~~~ce~c-------gk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEIC-------GKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTT-------TEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHH-------HHHHHHHHHHHhhhcccCCCCCC
Confidence            45678888       88888888888888888888887

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=9e-05  Score=44.31  Aligned_cols=28  Identities=21%  Similarity=0.309  Sum_probs=22.2

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .|+|++|       +......+-|++|++.|++++
T Consensus         1 kYvC~~C-------g~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEEC-------GIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTT-------CCBCSSHHHHHHHHHHTSSCC
T ss_pred             Ccccccc-------CcccCCHHHHHHHHHHhcCCC
Confidence            3778887       788888888888888888775

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00014  Score=44.24  Aligned_cols=27  Identities=37%  Similarity=0.660  Sum_probs=16.7

Q ss_pred             Ccceecc-CCCccCChhHHHHHHHHhcC
Q 010389          161 TKEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       161 ~kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      ||||.|. |..+|++++.+.-|.+.|..
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4566666 66666666666666666543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00019  Score=42.42  Aligned_cols=27  Identities=33%  Similarity=0.495  Sum_probs=22.1

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      .++|.+|       +|.|.....|++|+.+|++|
T Consensus         2 ~hvc~ec-------gkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAEC-------GKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTT-------CCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHH-------hHHHHHHHHHHHHhhcccCC
Confidence            4578887       88888888888888888875

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.05  E-value=0.00016  Score=42.17  Aligned_cols=26  Identities=27%  Similarity=0.358  Sum_probs=22.7

Q ss_pred             eCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389          103 VCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus       103 ~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      +|+.|       .+.|.++..|+.|-+.|+|||
T Consensus         2 qcp~c-------~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTC-------HKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTT-------CCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcch-------HHHHHHhHhhhhccccccCCC
Confidence            57777       899999999999999999886

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00027  Score=42.02  Aligned_cols=27  Identities=19%  Similarity=0.298  Sum_probs=15.6

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHG  133 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~g  133 (512)
                      +||+|..|       ...-.+.+.|..|.+.|+|
T Consensus         2 rpfkcqlc-------sy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQIC-------PYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSS-------SCEESSHHHHHHHHTTCCS
T ss_pred             Ccceeeec-------ccccCCchheEEeeecccC
Confidence            45666665       5555555556666666554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00031  Score=41.48  Aligned_cols=25  Identities=32%  Similarity=0.599  Sum_probs=23.5

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+.|..|||.|.-...|++|+..|+
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTS
T ss_pred             cchHHHHhHHHHHHHHHHHHhhccc
Confidence            4789999999999999999999997

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.79  E-value=0.0004  Score=41.34  Aligned_cols=25  Identities=28%  Similarity=0.586  Sum_probs=23.3

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhc
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H   83 (512)
                      .||+|++  |+|.|.....|++|.+.|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899988  999999999999999987

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00054  Score=40.33  Aligned_cols=26  Identities=23%  Similarity=0.511  Sum_probs=24.7

Q ss_pred             CCeeccccCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |||+|..|+..-.....|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999995

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00059  Score=40.71  Aligned_cols=25  Identities=28%  Similarity=0.646  Sum_probs=23.9

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|.|+.|+......+-|++|+|.|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT   25 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHT   25 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTS
T ss_pred             CccccccCcccCCHHHHHHHHHHhc
Confidence            4899999999999999999999997

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00047  Score=41.14  Aligned_cols=24  Identities=29%  Similarity=0.650  Sum_probs=22.3

Q ss_pred             CeeccccCcccCChHHHHHHHHhc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      ||.|.+|+..|.++.+|..||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            699999999999999999999754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.64  E-value=0.00052  Score=40.87  Aligned_cols=27  Identities=22%  Similarity=0.492  Sum_probs=21.8

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhc
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      .||+|+.-+|     ++.|...+.|++|.++|
T Consensus         2 ~py~c~hegc-----dk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGC-----DKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTC-----CCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCc-----cccccCHHHHhhhhhcc
Confidence            4788876655     89999999999998877

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.62  E-value=0.00058  Score=39.75  Aligned_cols=23  Identities=35%  Similarity=0.719  Sum_probs=22.2

Q ss_pred             eccccCcccCChHHHHHHHHhcC
Q 010389           62 VCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        62 ~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +|+.|.|.|..+..|+.|-|.|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~ht   24 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHT   24 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHS
T ss_pred             cCcchHHHHHHhHhhhhcccccc
Confidence            69999999999999999999997

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.00072  Score=40.97  Aligned_cols=25  Identities=24%  Similarity=0.517  Sum_probs=14.8

Q ss_pred             cceecc---CCCccCChhHHHHHHHHhc
Q 010389          162 KEYKCN---CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       162 kpy~C~---Cgk~F~~~~~L~~H~~~hh  186 (512)
                      |||.|.   |++.|...+.|++|++.+|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            456664   6666666666666665554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.00071  Score=40.12  Aligned_cols=27  Identities=30%  Similarity=0.647  Sum_probs=25.5

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++||+|..|...-.....|..|.|.|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CCcceeeecccccCCchheEEeeeccc
Confidence            479999999999999999999999997

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.56  E-value=0.00063  Score=38.98  Aligned_cols=24  Identities=29%  Similarity=0.783  Sum_probs=22.8

Q ss_pred             eeccccCcccCChHHHHHHHHhcC
Q 010389           61 FVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        61 f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      |+|-.|.+.|..+..|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999984

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.54  E-value=0.00047  Score=42.20  Aligned_cols=23  Identities=13%  Similarity=0.479  Sum_probs=12.3

Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ||.|.+|++.|.++..|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            45555555555555555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00092  Score=43.77  Aligned_cols=27  Identities=48%  Similarity=0.939  Sum_probs=18.9

Q ss_pred             CCcceecc-CCCccCChhHHHHHHHHhc
Q 010389          160 GTKEYKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       160 ~~kpy~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      +-|||.|. |+|.|-+++.+.+|+..+.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~C~   29 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTSCT   29 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhhhh
Confidence            45777777 7777777777777765543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.00073  Score=40.50  Aligned_cols=24  Identities=33%  Similarity=0.607  Sum_probs=13.4

Q ss_pred             ccccccCCCCcccChHHHhhhhhh
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |||.|.+|.......++|+.|+++
T Consensus         1 kpy~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhc
Confidence            355555555555555555555555

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.42  E-value=0.001  Score=43.20  Aligned_cols=27  Identities=26%  Similarity=0.603  Sum_probs=25.3

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .+.|+|.+|+|.|.+-..|=-||+.|.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhc
Confidence            467999999999999999999999997

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.42  E-value=0.00063  Score=44.56  Aligned_cols=27  Identities=22%  Similarity=0.680  Sum_probs=24.1

Q ss_pred             cCCccccccCCCCcccChHHHhhhhhh
Q 010389          132 HGEKKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       132 ~gekp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      +|.|||.|.+|+|.|..+..+.+|...
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhh
Confidence            467999999999999999999999754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.41  E-value=0.0012  Score=37.84  Aligned_cols=22  Identities=27%  Similarity=0.754  Sum_probs=11.0

Q ss_pred             ccccCCCCcccChHHHhhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |+|..|.+.|..++.|.+|+|+
T Consensus         1 ykcglcersfveksalsrhqrv   22 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGG
T ss_pred             CcccchHHHHHHHHHHHHHHHh
Confidence            3455555555555555555444

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.40  E-value=0.00075  Score=41.26  Aligned_cols=25  Identities=36%  Similarity=0.748  Sum_probs=22.6

Q ss_pred             ceecc-CCCccCChhHHHHHHHHhcC
Q 010389          163 EYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       163 py~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      ||.|. |++.|.+++.|.+|.++-|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            79999 99999999999999877664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00096  Score=39.25  Aligned_cols=23  Identities=26%  Similarity=0.560  Sum_probs=9.7

Q ss_pred             cccccCCCCcccChHHHhhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ||+|..|.+.-...+.|++|+|+
T Consensus         3 p~kck~cdyaaadsssl~kh~ri   25 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRI   25 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CcccccccchhcchhhHhhhhhc
Confidence            34444444444444444444443

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00092  Score=39.86  Aligned_cols=21  Identities=19%  Similarity=0.629  Sum_probs=8.8

Q ss_pred             ccccCCCCcccChHHHhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~  157 (512)
                      |.|..|...|..+.+|..||+
T Consensus         2 y~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           2 YHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             cccceeeeeEeeccchhHhhh
Confidence            344444444444444444443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.00084  Score=40.14  Aligned_cols=26  Identities=31%  Similarity=0.551  Sum_probs=15.5

Q ss_pred             ccccccCCCCcccChHHHhhhhhh-cC
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV-CG  160 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~-h~  160 (512)
                      |||+|.+|....++.++|..|++. |+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            456666666666666666666655 43

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.0017  Score=38.61  Aligned_cols=27  Identities=33%  Similarity=0.792  Sum_probs=25.1

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +..|.|..|...|+++-.|+.||..|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvsht   28 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHT   28 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeeccc
Confidence            457999999999999999999999997

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0014  Score=41.40  Aligned_cols=33  Identities=24%  Similarity=0.441  Sum_probs=26.2

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +.|.|.+-+|...  ++.|..+..|..|||+|+||
T Consensus         1 k~y~C~W~~C~R~--~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRE--LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTT--TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCC--CCcchhHHHHHHHHhhcCCC
Confidence            3577877777433  57799999999999999986

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.0022  Score=41.39  Aligned_cols=28  Identities=29%  Similarity=0.701  Sum_probs=23.1

Q ss_pred             CCcceecc---CCCccCChhHHHHHHHHhcC
Q 010389          160 GTKEYKCN---CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       160 ~~kpy~C~---Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      .+|||.|.   |+.+|...+.|..|+++|..
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~m   33 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhee
Confidence            46888886   88899998888888888864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0028  Score=40.84  Aligned_cols=28  Identities=25%  Similarity=0.720  Sum_probs=25.1

Q ss_pred             CCCCeecc--ccCcccCChHHHHHHHHhcC
Q 010389           57 ATNRFVCE--ICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        57 ~~k~f~C~--~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ++|||.|.  -|+..|.+..+|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899995  59999999999999999885

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.83  E-value=0.0022  Score=38.26  Aligned_cols=30  Identities=23%  Similarity=0.625  Sum_probs=23.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +||.|.+-+|     .|.|.+...|.+|..+|+||
T Consensus         1 ~pfpc~~egc-----~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGC-----EKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSC-----CCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccc-----cccchhhhhhhhhhccccCC
Confidence            4677776655     88888888888888888775

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.76  E-value=0.0029  Score=37.61  Aligned_cols=29  Identities=17%  Similarity=0.436  Sum_probs=21.1

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +..|.|..|       ...|.++-.|+.||-.|+||
T Consensus         2 eqvftcs~c-------qe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVC-------QETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSS-------CCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHH-------HHHHHHHHhheeeeecccCC
Confidence            356777777       77777777777777777764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.61  E-value=0.0038  Score=37.32  Aligned_cols=28  Identities=21%  Similarity=0.330  Sum_probs=25.0

Q ss_pred             cceecc-CCCccCChhHHHHHHHHhcCcc
Q 010389          162 KEYKCN-CGAVFSRRDSFITHRAFCDMLT  189 (512)
Q Consensus       162 kpy~C~-Cgk~F~~~~~L~~H~~~hh~~~  189 (512)
                      +||.|. |..+-....+|+.|++..|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            689999 9999999999999999887643

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.32  E-value=0.0044  Score=36.23  Aligned_cols=24  Identities=33%  Similarity=0.625  Sum_probs=21.5

Q ss_pred             CeeccccCcccCChHHHHHHHHhc
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      ||+|..|||.|-++.+|..|....
T Consensus         1 pf~c~kcgkcyfrkenllehearn   24 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEARN   24 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHC
T ss_pred             CCccccchhhhhhHhHHHHHHHHh
Confidence            699999999999999999997543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.24  E-value=0.0041  Score=37.91  Aligned_cols=29  Identities=21%  Similarity=0.559  Sum_probs=21.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhh-hhccC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHF-CRKHG  133 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~-~~H~g  133 (512)
                      |||.|++.+|     .|.|.+.+.-.+|. |+|..
T Consensus         1 kPY~C~~~gC-----~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGC-----SKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTC-----CCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCCh-----hhhhcchhhhhhhccccccC
Confidence            5788877655     88888888888886 66654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.16  E-value=0.0068  Score=39.22  Aligned_cols=30  Identities=17%  Similarity=0.354  Sum_probs=22.3

Q ss_pred             CcceeCCCCCCCCCCCCCccCChhhHHhhhhhccCCc
Q 010389           99 KRVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGEK  135 (512)
Q Consensus        99 ~k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~gek  135 (512)
                      .+.|+|.+|       ++.|.+-..|--||+.|..++
T Consensus         3 ~r~~~C~~C-------~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFC-------KREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTT-------CCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCC-------CCccCCcccccchHhhhcchH
Confidence            456778877       788888888888887776554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.004  Score=37.95  Aligned_cols=26  Identities=31%  Similarity=0.753  Sum_probs=23.7

Q ss_pred             CCeeccc--cCcccCChHHHHHHH-HhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHR-RGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~-r~H~   84 (512)
                      |||.|++  |.|.|.+..+--+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            6899998  999999999999997 8885

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.0071  Score=36.04  Aligned_cols=26  Identities=19%  Similarity=0.378  Sum_probs=23.8

Q ss_pred             cceecc-CCCccCChhHHHHHHHHhcC
Q 010389          162 KEYKCN-CGAVFSRRDSFITHRAFCDM  187 (512)
Q Consensus       162 kpy~C~-Cgk~F~~~~~L~~H~~~hh~  187 (512)
                      |||+|. |..-..+.++|..|+++.|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            689999 99999999999999988774

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.03  E-value=0.0055  Score=36.51  Aligned_cols=26  Identities=35%  Similarity=0.683  Sum_probs=23.7

Q ss_pred             CCeeccc--cCcccCChHHHHHHHHhcC
Q 010389           59 NRFVCEI--CNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        59 k~f~C~~--Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +||.|..  |.|.|.+..+|.+|..+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~tht   28 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHT   28 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHH
T ss_pred             CCcCcccccccccchhhhhhhhhhcccc
Confidence            5899976  9999999999999999986

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.86  E-value=0.0072  Score=35.32  Aligned_cols=22  Identities=27%  Similarity=0.631  Sum_probs=13.0

Q ss_pred             cccccCCCCcccChHHHhhhhh
Q 010389          136 KWKCDKCSKKYAVQSDYKAHSK  157 (512)
Q Consensus       136 p~~C~~C~k~F~~~~~L~~H~~  157 (512)
                      ||+|..|||.|-++.+|..|.-
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4566666666666666665543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.84  E-value=0.0083  Score=34.33  Aligned_cols=25  Identities=28%  Similarity=0.585  Sum_probs=22.3

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|.|+.|-|.|.++.++..|.++-|
T Consensus         1 vypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             CcCCchhhHHhccccCceEEEEEec
Confidence            3899999999999999999988654

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.82  E-value=0.011  Score=33.70  Aligned_cols=23  Identities=26%  Similarity=0.615  Sum_probs=21.3

Q ss_pred             CeeccccCcccCChHHHHHHHHh
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRG   82 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~   82 (512)
                      ||+|.-|...|-.+.+|+.||-.
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            79999999999999999999853

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.012  Score=34.49  Aligned_cols=25  Identities=28%  Similarity=0.667  Sum_probs=22.5

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|+|++|+....++.+|+.|++.-+
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            5899999999999999999998643

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.56  E-value=0.013  Score=33.32  Aligned_cols=22  Identities=27%  Similarity=0.693  Sum_probs=14.5

Q ss_pred             ceecc-CCCccCChhHHHHHHHH
Q 010389          163 EYKCN-CGAVFSRRDSFITHRAF  184 (512)
Q Consensus       163 py~C~-Cgk~F~~~~~L~~H~~~  184 (512)
                      ||+|. |...|-.+..|+.|+-+
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            56676 77777776667666543

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.46  E-value=0.031  Score=31.93  Aligned_cols=23  Identities=30%  Similarity=0.707  Sum_probs=12.4

Q ss_pred             eecc-CCCccCChhHHHHHHHHhc
Q 010389          164 YKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       164 y~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      |.|+ |-+.|.+++++..|.+..|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            4555 5555555555555554433

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.73  E-value=0.028  Score=34.94  Aligned_cols=25  Identities=32%  Similarity=0.671  Sum_probs=22.0

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|+|..|+|.|.++..+.+|-....
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            5999999999999999999976554

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.64  E-value=0.041  Score=32.22  Aligned_cols=25  Identities=12%  Similarity=0.081  Sum_probs=17.9

Q ss_pred             ceeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389          101 VYVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       101 ~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      |-+|++|       .....++..|+.|.|+|.
T Consensus         2 pekc~ec-------syscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSEC-------SYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSS-------SCEESSHHHHHHHHGGGC
T ss_pred             CccCccc-------ccccCcHHHHHHhhcccc
Confidence            3467777       777777777777777775

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.26  E-value=0.052  Score=31.79  Aligned_cols=25  Identities=24%  Similarity=0.421  Sum_probs=23.1

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      +-+|+.|......+..|+.|.|+|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4689999999999999999999995

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.83  E-value=0.062  Score=33.34  Aligned_cols=23  Identities=35%  Similarity=0.998  Sum_probs=13.4

Q ss_pred             eecc-CCCccCChhHHHHHHHHhc
Q 010389          164 YKCN-CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       164 y~C~-Cgk~F~~~~~L~~H~~~hh  186 (512)
                      |.|. |+|+|.++..+.+|-..+.
T Consensus         5 fvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeecccccchhcchHHHHHhhhcC
Confidence            5565 6666666666666655444

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.81  E-value=0.036  Score=32.35  Aligned_cols=22  Identities=27%  Similarity=0.576  Sum_probs=12.3

Q ss_pred             ccccCCCCcccChHHHhhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |+|+.|+....+++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            4555555555555555555554

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.05  E-value=0.073  Score=35.79  Aligned_cols=27  Identities=26%  Similarity=0.576  Sum_probs=24.3

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ...|.|-.|+|.|.....|+.|...|-
T Consensus         4 ~~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           4 AGILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             cceeeccccccccCCHHHHhHhHHhcC
Confidence            346899999999999999999998885

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.74  E-value=0.052  Score=32.72  Aligned_cols=30  Identities=23%  Similarity=0.561  Sum_probs=24.4

Q ss_pred             cceeCCCCCCCCCCCCCccCChhhHHhhhhhccCC
Q 010389          100 RVYVCPEKSCVHHDPTRALGDLTGIKKHFCRKHGE  134 (512)
Q Consensus       100 k~~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~ge  134 (512)
                      +.|.|.+.+|     +..|.....|..|...|+||
T Consensus         2 k~~iCsf~dC-----~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADC-----GAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGG-----CCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCc-----chhhccchhhhHHhhhhcCC
Confidence            4677776655     88999999999999999886

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.38  E-value=0.1  Score=30.24  Aligned_cols=22  Identities=27%  Similarity=0.763  Sum_probs=17.7

Q ss_pred             eecc---CCCccCChhHHHHHHHHh
Q 010389          164 YKCN---CGAVFSRRDSFITHRAFC  185 (512)
Q Consensus       164 y~C~---Cgk~F~~~~~L~~H~~~h  185 (512)
                      |.|.   |++.|+....|+.|+-.|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            6776   888888888888887665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.13  E-value=0.075  Score=35.74  Aligned_cols=24  Identities=21%  Similarity=0.513  Sum_probs=13.3

Q ss_pred             ccccCCCCcccChHHHhhhhhhcC
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKVCG  160 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~h~  160 (512)
                      |.|..|+|.|.....|+.|.-.|+
T Consensus         7 ~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           7 LPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeccccccccCCHHHHhHhHHhcC
Confidence            455555555555555555554443

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.16  E-value=0.12  Score=30.22  Aligned_cols=23  Identities=26%  Similarity=0.551  Sum_probs=17.8

Q ss_pred             CCCCCCCCccCChhhHHhhhhhc
Q 010389          109 CVHHDPTRALGDLTGIKKHFCRK  131 (512)
Q Consensus       109 C~~~~~~k~F~~~~~Lk~H~~~H  131 (512)
                      |.+.+|.|-|.+.+.+++|+-+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            34445589999999999998776

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.33  E-value=0.14  Score=29.95  Aligned_cols=22  Identities=27%  Similarity=0.643  Sum_probs=19.9

Q ss_pred             eccc--cCcccCChHHHHHHHHhc
Q 010389           62 VCEI--CNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        62 ~C~~--Cgk~F~~~~~L~~H~r~H   83 (512)
                      .|++  |+|.|+....+++|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            5766  999999999999999888

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.83  E-value=0.24  Score=29.21  Aligned_cols=25  Identities=20%  Similarity=0.554  Sum_probs=17.7

Q ss_pred             cceecc---CCCccCChhHHHHHHHHhc
Q 010389          162 KEYKCN---CGAVFSRRDSFITHRAFCD  186 (512)
Q Consensus       162 kpy~C~---Cgk~F~~~~~L~~H~~~hh  186 (512)
                      +.|+|+   |+.+|.++.+++.|-..-|
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhhc
Confidence            357776   8888888888888764444

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.50  E-value=0.55  Score=31.29  Aligned_cols=29  Identities=21%  Similarity=0.381  Sum_probs=24.7

Q ss_pred             CCCCCeeccccCcccCChHHHHHHHHhcC
Q 010389           56 LATNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        56 ~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ..+.|-.|++|+-......+|++|...-|
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            34568899999999999999999987544

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.23  E-value=0.18  Score=29.79  Aligned_cols=25  Identities=20%  Similarity=0.509  Sum_probs=21.9

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      .|.|.+|+|..++...++.|+..-+
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             ceechhHHHHHhhccCceEEEeecc
Confidence            4899999999999999999976543

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.07  E-value=0.17  Score=29.19  Aligned_cols=26  Identities=27%  Similarity=0.530  Sum_probs=19.4

Q ss_pred             eeCCCCCCCCCCCCCccCChhhHHhhhhhcc
Q 010389          102 YVCPEKSCVHHDPTRALGDLTGIKKHFCRKH  132 (512)
Q Consensus       102 ~~C~~C~C~~~~~~k~F~~~~~Lk~H~~~H~  132 (512)
                      |+|.+-+|     ++.|.....|+.|.-.|+
T Consensus         2 yvchfe~c-----~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENC-----GKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTC-----CCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCc-----hHHHhhccceEEEeeccc
Confidence            56655444     888888888888887775

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.96  E-value=0.13  Score=37.73  Aligned_cols=24  Identities=29%  Similarity=0.488  Sum_probs=21.8

Q ss_pred             CCeeccccCcccCChHHHHHHHHh
Q 010389           59 NRFVCEICNKGFQRDQNLQLHRRG   82 (512)
Q Consensus        59 k~f~C~~Cgk~F~~~~~L~~H~r~   82 (512)
                      .-|.|.+|+|.|.+...|+.|++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            459999999999999999999865

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.48  E-value=0.18  Score=36.13  Aligned_cols=29  Identities=24%  Similarity=0.478  Sum_probs=25.9

Q ss_pred             CCCCeeccccCcccCChHHHHHHHHhcCC
Q 010389           57 ATNRFVCEICNKGFQRDQNLQLHRRGHNL   85 (512)
Q Consensus        57 ~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~   85 (512)
                      ...-|+|.+|+..|.....|..|...|+.
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34579999999999999999999999973

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.94  E-value=0.41  Score=28.18  Aligned_cols=22  Identities=23%  Similarity=0.536  Sum_probs=10.5

Q ss_pred             ccccCCCCcccChHHHhhhhhh
Q 010389          137 WKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       137 ~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      |.|..|+|..+....++.|...
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            4444455544444444444433

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.77  E-value=0.37  Score=34.59  Aligned_cols=39  Identities=18%  Similarity=0.317  Sum_probs=27.2

Q ss_pred             cccCCCCCeeccccCcccCChHHHHHHHHhcCCCchhhcccccccCCcceeCCCC
Q 010389           53 KTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEVKKRVYVCPEK  107 (512)
Q Consensus        53 ~~~~~~k~f~C~~Cgk~F~~~~~L~~H~r~H~~p~~~~~~~~~~~~~k~~~C~~C  107 (512)
                      +.......|+|+.|++.|.....++.   .-.             ....|.|..|
T Consensus         7 rd~~~~~~y~Cp~C~~~ys~Lda~~L---~d~-------------~~~~F~C~~C   45 (62)
T d1vd4a_           7 RDSTNRASFKCPVCSSTFTDLEANQL---FDP-------------MTGTFRCTFC   45 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHHH---EET-------------TTTEEBCSSS
T ss_pred             hccccCCceECCCCCCCcchhhHHHh---cCc-------------CCCeEEecCC
Confidence            34445678999999999976665543   211             4567889888

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.44  E-value=0.35  Score=29.96  Aligned_cols=27  Identities=15%  Similarity=0.458  Sum_probs=23.7

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhcC
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      ...|.|.+|.+.|..-.++.+|..+-|
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            457999999999999999999976654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.40  E-value=0.22  Score=30.89  Aligned_cols=24  Identities=25%  Similarity=0.632  Sum_probs=11.4

Q ss_pred             ccccccCCCCcccChHHHhhhhhh
Q 010389          135 KKWKCDKCSKKYAVQSDYKAHSKV  158 (512)
Q Consensus       135 kp~~C~~C~k~F~~~~~L~~H~~~  158 (512)
                      ..|+|.+|.+.|...+++-+|..+
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHh
Confidence            344455555555444444444433

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.38  E-value=0.31  Score=32.49  Aligned_cols=30  Identities=17%  Similarity=0.260  Sum_probs=18.4

Q ss_pred             CCccccccCCCCcccChHHHhhhhhh-cCCc
Q 010389          133 GEKKWKCDKCSKKYAVQSDYKAHSKV-CGTK  162 (512)
Q Consensus       133 gekp~~C~~C~k~F~~~~~L~~H~~~-h~~k  162 (512)
                      .+.|-.|.+|+.......+|++|+.. |-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            35566666666666666666666665 5333

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.18  E-value=0.55  Score=28.66  Aligned_cols=26  Identities=27%  Similarity=0.535  Sum_probs=22.7

Q ss_pred             CCCeeccccCcccCChHHHHHHHHhc
Q 010389           58 TNRFVCEICNKGFQRDQNLQLHRRGH   83 (512)
Q Consensus        58 ~k~f~C~~Cgk~F~~~~~L~~H~r~H   83 (512)
                      ..+|.|.-||..|.....|..|+...
T Consensus         6 parf~c~pcgirfss~stleahqtyy   31 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQAYY   31 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTTTT
T ss_pred             ccceeccccceeecChhHHHhhhhee
Confidence            45799999999999999999997643

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=80.37  E-value=0.29  Score=41.84  Aligned_cols=24  Identities=38%  Similarity=0.713  Sum_probs=20.8

Q ss_pred             CeeccccCcccCChHHHHHHHHhcC
Q 010389           60 RFVCEICNKGFQRDQNLQLHRRGHN   84 (512)
Q Consensus        60 ~f~C~~Cgk~F~~~~~L~~H~r~H~   84 (512)
                      -|+|++|+| |..-.+|.+|++.|-
T Consensus       146 FYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         146 FYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             EEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             EeehhhcCc-eecHHHHHHHHHHcC
Confidence            489999998 566789999999995