Your job contains 1 sequence.
>010390
MATPKSESFFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVTVEHHGEETPPLAVSFCK
TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED
TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL
RCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASA
VNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL
YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLK
SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSSVRRRVMAIPSTECR
KLFMNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKKKIPSFDTKEAFEK
TPEASLNSPSSVLNPPSSVKRRTIRDYFLVTP
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010390
(512 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2089179 - symbol:AT3G27640 "AT3G27640" species... 1497 1.7e-153 1
UNIPROTKB|Q5ZJW8 - symbol:DTL "Denticleless protein homol... 580 2.5e-56 1
UNIPROTKB|Q6GPU3 - symbol:dtl-b "Denticleless protein hom... 553 1.6e-55 2
MGI|MGI:1924093 - symbol:Dtl "denticleless homolog (Droso... 567 6.1e-55 1
UNIPROTKB|E1BJV8 - symbol:LOC539953 "Uncharacterized prot... 563 1.6e-54 1
UNIPROTKB|Q9NZJ0 - symbol:DTL "Denticleless protein homol... 560 3.4e-54 1
UNIPROTKB|Q6P1W0 - symbol:dtl "Denticleless protein homol... 558 5.5e-54 1
UNIPROTKB|Q4V837 - symbol:dtl-a "Denticleless protein hom... 551 3.0e-53 1
UNIPROTKB|E2QT91 - symbol:DTL "Uncharacterized protein" s... 550 3.8e-53 1
UNIPROTKB|F1S2V6 - symbol:DTL "Uncharacterized protein" s... 548 6.3e-53 1
UNIPROTKB|F5GZ90 - symbol:DTL "Denticleless protein homol... 542 2.7e-52 1
ZFIN|ZDB-GENE-020419-34 - symbol:dtl "denticleless homolo... 541 3.5e-52 1
FB|FBgn0013548 - symbol:l(2)dtl "lethal-(2)-denticleless"... 443 4.2e-41 1
WB|WBGene00011318 - symbol:cdt-2 species:6239 "Caenorhabd... 339 6.6e-30 2
POMBASE|SPAC17H9.19c - symbol:cdt2 "WD repeat protein Cdt... 308 2.3e-25 1
RGD|1310439 - symbol:Dtl "denticleless E3 ubiquitin prote... 267 1.4e-22 1
ASPGD|ASPL0000048435 - symbol:AN2148 species:162425 "Emer... 187 1.8e-19 4
FB|FBgn0038927 - symbol:CG6015 species:7227 "Drosophila m... 230 4.2e-16 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 215 2.0e-14 1
UNIPROTKB|G4MYR8 - symbol:MGG_08141 "WD repeat-containing... 180 1.1e-12 2
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 142 2.7e-12 2
RGD|1307063 - symbol:Cdc40 "cell division cycle 40" speci... 192 4.0e-12 1
UNIPROTKB|F1LMQ0 - symbol:Cdc40 "Protein Cdc40" species:1... 192 4.1e-12 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 189 4.2e-12 1
UNIPROTKB|O60508 - symbol:CDC40 "Pre-mRNA-processing fact... 194 4.2e-12 1
UNIPROTKB|F1NQ45 - symbol:CDC40 "Uncharacterized protein"... 194 4.3e-12 1
TAIR|locus:2194589 - symbol:AT1G10580 "AT1G10580" species... 192 6.9e-12 1
MGI|MGI:1918963 - symbol:Cdc40 "cell division cycle 40" s... 192 7.0e-12 1
UNIPROTKB|F1MBS9 - symbol:CDC40 "Uncharacterized protein"... 191 9.1e-12 1
UNIPROTKB|F1RSY9 - symbol:CDC40 "Uncharacterized protein"... 191 9.1e-12 1
UNIPROTKB|E2RSW2 - symbol:CDC40 "Uncharacterized protein"... 191 1.1e-11 1
WB|WBGene00018625 - symbol:prp-17 species:6239 "Caenorhab... 185 3.1e-11 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 154 3.5e-11 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 145 3.5e-11 2
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 150 3.6e-11 2
DICTYBASE|DDB_G0289501 - symbol:cdc40 "putative RNA splic... 183 7.2e-11 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 178 8.2e-11 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 140 1.1e-10 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 180 1.5e-10 1
UNIPROTKB|Q5JKX0 - symbol:B1147A04.35 "cDNA clone:J013000... 139 1.6e-10 3
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 180 1.7e-10 1
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 129 2.2e-10 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 183 2.3e-10 1
ASPGD|ASPL0000003994 - symbol:AN6160 species:162425 "Emer... 168 2.3e-10 2
ZFIN|ZDB-GENE-060803-1 - symbol:ahi1 "Abelson helper inte... 139 2.3e-10 2
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 114 2.3e-10 2
TAIR|locus:2123929 - symbol:VIP3 "AT4G29830" species:3702... 123 2.4e-10 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 178 2.5e-10 1
DICTYBASE|DDB_G0275323 - symbol:tipD "autophagy protein 1... 178 2.7e-10 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 178 2.8e-10 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 178 3.4e-10 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 178 3.4e-10 1
UNIPROTKB|Q676U5 - symbol:ATG16L1 "Autophagy-related prot... 177 3.4e-10 1
ASPGD|ASPL0000003533 - symbol:AN6867 species:162425 "Emer... 155 4.3e-10 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 176 6.3e-10 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 171 7.7e-10 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 169 8.7e-10 1
UNIPROTKB|E2R5F8 - symbol:ATG16L1 "Uncharacterized protei... 173 9.5e-10 1
MGI|MGI:1924290 - symbol:Atg16l1 "autophagy related 16-li... 173 9.5e-10 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 168 1.2e-09 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 169 1.3e-09 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 167 1.5e-09 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 167 1.5e-09 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 167 1.5e-09 1
UNIPROTKB|I3LTD5 - symbol:WDR33 "Uncharacterized protein"... 117 1.5e-09 2
UNIPROTKB|A4RJV3 - symbol:MDV1 "Mitochondrial division pr... 142 1.8e-09 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 170 2.3e-09 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 170 2.3e-09 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 165 2.6e-09 1
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 169 2.6e-09 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 163 2.7e-09 1
FB|FBgn0004623 - symbol:Gbeta76C "G protein beta-subunit ... 106 3.2e-09 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 163 3.5e-09 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 163 3.5e-09 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 163 3.5e-09 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 163 3.5e-09 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 163 3.5e-09 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 172 3.7e-09 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 164 3.9e-09 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 111 4.1e-09 2
RGD|1311400 - symbol:Atg16l2 "autophagy related 16-like 2... 167 4.5e-09 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 164 4.6e-09 1
UNIPROTKB|Q9UMS4 - symbol:PRPF19 "Pre-mRNA-processing fac... 165 5.2e-09 1
POMBASE|SPBC6B1.10 - symbol:prp17 "splicing factor Prp17"... 165 6.2e-09 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 116 8.0e-09 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 170 8.8e-09 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 163 9.1e-09 1
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 161 9.6e-09 1
UNIPROTKB|B2CCY7 - symbol:PRPF19 "Nuclear matrix protein ... 162 1.1e-08 1
MGI|MGI:1914735 - symbol:Pwp1 "PWP1 homolog (S. cerevisia... 150 1.2e-08 2
MGI|MGI:1920933 - symbol:Atg16l2 "autophagy related 16-li... 163 1.2e-08 1
MGI|MGI:1306796 - symbol:Apaf1 "apoptotic peptidase activ... 150 1.3e-08 2
UNIPROTKB|G1LTM7 - symbol:AHI1 "Uncharacterized protein" ... 147 1.4e-08 2
UNIPROTKB|Q08E38 - symbol:PRPF19 "Pre-mRNA-processing fac... 161 1.4e-08 1
UNIPROTKB|D2H0U8 - symbol:PANDA_003072 "Putative uncharac... 147 1.5e-08 2
SGD|S000002772 - symbol:CDC40 "Pre-mRNA splicing factor" ... 160 1.5e-08 1
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 112 1.6e-08 2
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 114 1.8e-08 2
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 162 1.8e-08 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 136 1.8e-08 2
WARNING: Descriptions of 721 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 1497 (532.0 bits), Expect = 1.7e-153, P = 1.7e-153
Identities = 304/525 (57%), Positives = 375/525 (71%)
Query: 1 MATPKSESFFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVTVEHHGEETPPLAVSFCK 60
M + +S S F+N+ RELNGF+ RKRP+F D EI V VEH G TPPLAVSFCK
Sbjct: 20 MESSRSRSVFVNIGLRELNGFRVRKRPFFADSELICREIAGVAVEHDGIWTPPLAVSFCK 79
Query: 61 TSKNSHIFAVSDEDGYVSLFDSR-RKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKE 119
TS+NS +FAVSDEDG+VSLF+S +K S A H+EN EKAR DW+AH NAIFD+ WIK
Sbjct: 80 TSRNSQLFAVSDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKG 139
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D+ +LTASGDQTIK+WD E+ KCTG L+GHTG++KS+CSHPTNSD+LVSGSRDG FA+WD
Sbjct: 140 DSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Query: 180 LRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATAS 239
LRCKSS S+ E + S+ +VKGAHL SKR+ RRKAAS SITSVLY+KDE++IATA
Sbjct: 200 LRCKSS--SHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLYVKDEITIATAG 257
Query: 240 AVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIY 299
A +S +KFWD R LKA QA P ++ ++ KE R HGI SLSQDS+G +LTASC D+RIY
Sbjct: 258 APDSALKFWDIRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNRIY 317
Query: 300 LYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKL 359
LYN L+LDKGP+Q FSGCRI+SF+V++ I P+ ++LSGSSDGNAY+WQVNKPQ DPI L
Sbjct: 318 LYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIIL 377
Query: 360 KSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN---XXXXXXXXXXXXXXXVMAIPS 416
K HD EVTAV+W P+E GK+ T+SDD+TVRLW++EN V A+ +
Sbjct: 378 KGHDFEVTAVDWSPSEIGKVATASDDFTVRLWNIENNICTNANATASVSRVKRRVTALSN 437
Query: 417 TECR-KLFMNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKKK------I 469
TE + +L MN E K S S +SDD N +D ++MPIIRTPE+QKKK +
Sbjct: 438 TEAKERLEMNRETESPQKHS--SLSSDDDYN----ND-QSMPIIRTPESQKKKTSSSSSL 490
Query: 470 PSFDTKEAF--EKTPEAXXXXXXXXXXXXXXXKRRTIRDYFLVTP 512
S ++E E+TPE KRRTIRDYFLVTP
Sbjct: 491 SSLSSEEDIICERTPETTFNSPSSVLNPPSSVKRRTIRDYFLVTP 535
>UNIPROTKB|Q5ZJW8 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0031572 "G2
DNA damage checkpoint" evidence=ISS] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISS] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0019985 "translesion
synthesis" evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000209 "protein polyubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0004842 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 EMBL:AJ720316
IPI:IPI00592297 RefSeq:NP_001026219.1 UniGene:Gga.20498
ProteinModelPortal:Q5ZJW8 STRING:Q5ZJW8 Ensembl:ENSGALT00000015990
GeneID:421373 KEGG:gga:421373 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 InParanoid:Q5ZJW8 OMA:ICTYFHR
OrthoDB:EOG4N5VWH NextBio:20824150 Uniprot:Q5ZJW8
Length = 720
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 133/363 (36%), Positives = 192/363 (52%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP SF H+ AV++E+G+V L+D+ +N K +W AH
Sbjct: 43 GMPVPPFGCSFSAAPNFEHVLAVANEEGFVRLYDTEA---------QNTTKLISKEWQAH 93
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + I+TASGDQT K+WD + G GH S+KS+ +
Sbjct: 94 SNAVFDLAWVPGEHRIVTASGDQTAKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFC 153
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLS--------QSKRVSRRKAA 219
+G RDG+ +WD RC N + F + GAH + + KR + R A
Sbjct: 154 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNVVDRQTPSKLRKKRQNLRGLA 207
Query: 220 SM-----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS--SAKET 272
+ S+T VL L+DE ++ +A AV+ ++K WD R A Q ++S T
Sbjct: 208 PLVDFQQSVTVVL-LQDEHTLISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTST 266
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ FSG + +FY+KS I P+
Sbjct: 267 RKLGYSSLVLDSTGANLFANCTDDSIYMFNMTSLKTFPVAVFSGHQNSTFYIKSSISPDD 326
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD NAY+W+V++P P L H EVT++ WCP++ KI T SDD TVR+W
Sbjct: 327 QFLVSGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIWR 386
Query: 393 LEN 395
L++
Sbjct: 387 LQH 389
>UNIPROTKB|Q6GPU3 [details] [associations]
symbol:dtl-b "Denticleless protein homolog B" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 EMBL:BC073015 RefSeq:NP_001085609.1 UniGene:Xl.34158
ProteinModelPortal:Q6GPU3 GeneID:444035 KEGG:xla:444035 CTD:51514
Xenbase:XB-GENE-985629 Uniprot:Q6GPU3
Length = 711
Score = 553 (199.7 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 128/361 (35%), Positives = 191/361 (52%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F SH+ AV++E+G V L+D+ C + ++ + +++AH
Sbjct: 47 GRAVPPFGCAFSTVPGMSHVLAVANEEGIVRLYDTE-------CG--DMQRLVVKEFMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FD+ W+ + ++TASGDQT K+WD + + G GH S+KS+ +
Sbjct: 98 TNAVFDIAWVPGEHKLVTASGDQTAKLWDVKAGELIGECKGHQCSLKSVAFSKFERAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS-KRVSRRK------A 218
+G RDG+ +WD RC N + F + GAH + Q+ +V +RK A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQITGAHNAIDKQTPSKVKKRKPSIRGLA 211
Query: 219 ASM----SITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWP-HAESSSAKET 272
S+ S+T V++ +DE ++ +A AV+ +VK WD R N P T
Sbjct: 212 PSVDSQQSVTVVIF-QDEYTVISAGAVDGVVKIWDLRKNYSTYRQDPVPVKLFPYPGNST 270
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL D G L ASC D +Y++N L P+ F G + +FY+K+ + P+
Sbjct: 271 RKLGYSSLVLDPTGTNLFASCTDDNVYMFNATGLKTDPVSVFRGHQNSTFYIKASVSPDG 330
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSGSSD +AY+WQV+ P A PI L H EVT+V WC ++ KI T SDD TVR+W
Sbjct: 331 QFLLSGSSDHSAYIWQVSDPLAAPINLIGHCQEVTSVAWCQSDFTKIATCSDDNTVRIWR 390
Query: 393 L 393
L
Sbjct: 391 L 391
Score = 37 (18.1 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 425 NGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKK 467
N P + + S S NS +Q ++ + + TP + +K
Sbjct: 659 NSSPQFKSSSSPSSRNSTSKKHQPRNAPNSPVSVPTTPGSMRK 701
>MGI|MGI:1924093 [details] [associations]
symbol:Dtl "denticleless homolog (Drosophila)" species:10090
"Mus musculus" [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=ISO] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0009411 "response to UV"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=ISO] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031465 "Cul4B-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0051726 "regulation of cell cycle"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:1924093 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0009411 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0004842
GO:GO:0000209 GO:GO:0031572 GO:GO:0006513 GO:GO:0031464
GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514
GeneTree:ENSGT00530000064210 OMA:ICTYFHR OrthoDB:EOG4N5VWH
EMBL:AB095735 EMBL:AB095736 EMBL:AK012919 EMBL:AK054412
EMBL:AK133177 EMBL:AK161401 EMBL:AK166351 EMBL:BC060208
IPI:IPI00226049 IPI:IPI00336310 IPI:IPI00828553 RefSeq:NP_084042.1
UniGene:Mm.189102 ProteinModelPortal:Q3TLR7 SMR:Q3TLR7
IntAct:Q3TLR7 STRING:Q3TLR7 PhosphoSite:Q3TLR7 PRIDE:Q3TLR7
Ensembl:ENSMUST00000027933 GeneID:76843 KEGG:mmu:76843
UCSC:uc007eck.1 UCSC:uc007ecn.1 NextBio:345915 Bgee:Q3TLR7
CleanEx:MM_DTL Genevestigator:Q3TLR7 Uniprot:Q3TLR7
Length = 729
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 128/361 (35%), Positives = 186/361 (51%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +FC HI AV++E+G+V L+++ + C +E W+AH
Sbjct: 47 GVPVPPFGCTFCTAPSMEHILAVANEEGFVRLYNTESQTSKKTCFKE---------WMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVRAGELMGTCKGHQCSLKSVAFPKFQKAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKA--------- 218
+G RDG+ IWD RC N + F + GAH + + S+ K
Sbjct: 158 TGGRDGNIMIWDTRC------NKKDGFYRQVNQISGAHNTADKQTPSKPKKKQNSKGLAP 211
Query: 219 ---ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
+ S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S T
Sbjct: 212 AVDSQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGTST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ F+G + +FYVKS + P+
Sbjct: 270 RKLGYSSLVLDSTGSTLFANCTDDNIYMFNMTGLKTSPVAVFNGHQNSTFYVKSSLSPDD 329
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 QFLISGSSDEAAYIWKVSMPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWR 389
Query: 393 L 393
L
Sbjct: 390 L 390
>UNIPROTKB|E1BJV8 [details] [associations]
symbol:LOC539953 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 KO:K11790
GeneTree:ENSGT00530000064210 OMA:ICTYFHR EMBL:DAAA02043770
IPI:IPI00695259 RefSeq:XP_003587156.1 Ensembl:ENSBTAT00000024147
GeneID:539953 KEGG:bta:539953 Uniprot:E1BJV8
Length = 730
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 133/361 (36%), Positives = 190/361 (52%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F HI AV++E+G+V L+++ H + K I +W+AH
Sbjct: 47 GTPVPPFGCTFSSAPSMEHILAVANEEGFVRLYNTES-------H--TSRKKCIKEWMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGEFKLVTAAGDQTAKFWDVNAGELIGTCKGHQCSLKSVAFSKFEKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS------KRVSRRKAA 219
+G RDG+ +WD RC N + F + GAH L Q+ K+ S+ A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTLDKQTPSKPKKKQNSKGLAP 211
Query: 220 SM----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
S+ S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S T
Sbjct: 212 SVDFQQSVTVVLF-QDENTLVSAGAVDGIIKIWDLRKNYTAYRQE-PIASKSFLYPGSST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ FSG + +FYVKS I P+
Sbjct: 270 RKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAVFSGHQNSTFYVKSSISPDD 329
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 QFLVSGSSDEAAYIWKVSMPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKVWR 389
Query: 393 L 393
L
Sbjct: 390 L 390
>UNIPROTKB|Q9NZJ0 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0019985 "translesion synthesis" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IDA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA;TAS] [GO:0000209 "protein polyubiquitination"
evidence=IDA;TAS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0009411 EMBL:CH471100 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 OMA:ICTYFHR
OrthoDB:EOG4N5VWH EMBL:AF345896 EMBL:DQ641253 EMBL:AF195765
EMBL:AK000742 EMBL:AK001206 EMBL:AK001261 EMBL:AK027651
EMBL:AK292343 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
EMBL:BC033540 EMBL:BC033297 IPI:IPI00643808 IPI:IPI00827740
RefSeq:NP_057532.2 UniGene:Hs.656473 ProteinModelPortal:Q9NZJ0
SMR:Q9NZJ0 IntAct:Q9NZJ0 STRING:Q9NZJ0 PhosphoSite:Q9NZJ0
DMDM:302393825 PaxDb:Q9NZJ0 PRIDE:Q9NZJ0 DNASU:51514
Ensembl:ENST00000366991 GeneID:51514 KEGG:hsa:51514 UCSC:uc001hiz.4
GeneCards:GC01P212208 H-InvDB:HIX0020157 HGNC:HGNC:30288
HPA:HPA028016 MIM:610617 neXtProt:NX_Q9NZJ0 PharmGKB:PA142671941
InParanoid:Q9NZJ0 GenomeRNAi:51514 NextBio:55210
ArrayExpress:Q9NZJ0 Bgee:Q9NZJ0 CleanEx:HS_DTL
Genevestigator:Q9NZJ0 Uniprot:Q9NZJ0
Length = 730
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 129/361 (35%), Positives = 189/361 (52%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F H+ AV++E+G+V L+++ + SF K +W+AH
Sbjct: 47 GVPVPPFGCTFSSAPNMEHVLAVANEEGFVRLYNTESQ--SF-------RKKCFKEWMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK--------AA 219
+G RDG+ +WD RC N + F + GAH S + S+ K A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAP 211
Query: 220 SM----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
S+ S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S T
Sbjct: 212 SVDFQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGSST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ F+G + +FYVKS + P+
Sbjct: 270 RKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDD 329
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 QFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWR 389
Query: 393 L 393
L
Sbjct: 390 L 390
>UNIPROTKB|Q6P1W0 [details] [associations]
symbol:dtl "Denticleless protein homolog" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006513 "protein monoubiquitination" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0009411
"response to UV" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0007095 GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514
GeneTree:ENSGT00530000064210 HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH
EMBL:CR848464 EMBL:BC064851 RefSeq:NP_989402.1 UniGene:Str.5334
ProteinModelPortal:Q6P1W0 STRING:Q6P1W0 Ensembl:ENSXETT00000031497
GeneID:395039 KEGG:xtr:395039 Xenbase:XB-GENE-985623
InParanoid:Q6P1W0 OMA:GWACQKK Bgee:Q6P1W0 Uniprot:Q6P1W0
Length = 713
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 144/448 (32%), Positives = 215/448 (47%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F SH+ AV++E+G V L+D+ C + ++ + +++AH
Sbjct: 47 GAAVPPFGCAFSTVPDMSHVLAVANEEGIVRLYDTE-------CR--DVQRLVVKEFMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FD+ W+ + ++TASGDQT K+WD + G GH S+KS+ +
Sbjct: 98 TNAVFDIAWVPGEHKLVTASGDQTAKLWDVKAGDLIGECKGHQCSLKSVAFSKFEKAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS-KRVSRRK------A 218
+G RDG+ +WD RC N + F + GAH L Q+ +V +RK A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQITGAHNALDKQTPSKVKKRKPYVRGLA 211
Query: 219 ASM----SITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWP-HAESSSAKET 272
S+ S+T V++ +DE +I +A AV+ IVK WD R N A P T
Sbjct: 212 PSVDSQQSVTVVIF-QDEHTIISAGAVDGIVKVWDLRKNYSAYRQDPVPAKLFPYPGNST 270
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G S+L D G L ASC D +Y++N L P+ F G + +FY+K+ + P+
Sbjct: 271 RKLGYSNLVLDPTGTNLFASCTDDNVYMFNATGLKTEPVSVFGGHQNSTFYIKTSVSPDG 330
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSGSSD +AY+WQV+ P+ P+ L H EVT+V WC ++ KI T SDD TVR+W
Sbjct: 331 QFLLSGSSDHSAYIWQVSDPKVPPVTLTGHCQEVTSVAWCQSDFTKIATCSDDNTVRVWR 390
Query: 393 L----ENXXXXXXXXXXXXXXXVMAIPSTECRKLFMNGEPGWLAKGSDRSYNSDDVLNQI 448
L E+ +P + L G+P + S S +
Sbjct: 391 LKRSSEDSAQSDKTETVGWACQKKCVPPSMAANLCTPGKPSMIPSSSLMSSPTPATCAPS 450
Query: 449 NSSDPKNMPIIRTPEAQKKKIPSFDTKE 476
+ D MP TP + IP T +
Sbjct: 451 YTGDLP-MPS-STPVSALLPIPKLQTPQ 476
>UNIPROTKB|Q4V837 [details] [associations]
symbol:dtl-a "Denticleless protein homolog A" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 EMBL:BC097560
RefSeq:NP_001090030.1 UniGene:Xl.78280 ProteinModelPortal:Q4V837
GeneID:735103 KEGG:xla:735103 CTD:735103 Xenbase:XB-GENE-6254292
HOVERGEN:HBG057737 KO:K11790 Uniprot:Q4V837
Length = 710
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 129/362 (35%), Positives = 193/362 (53%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F SH+ AV++E+G V L+D+ C + ++ + +++AH
Sbjct: 47 GMPVPPFGCAFSTVPDMSHVLAVANEEGIVRLYDTE-------CR--DMQRLLMKEFMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FD+ W+ + ++TASGDQT K+WD + G GH S+KS+ +
Sbjct: 98 TNAVFDIAWVPGEHKLVTASGDQTAKLWDVMAGELIGECRGHQCSLKSVSFSKFERAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS-KRVSRRK------A 218
+G RDG+ +WD RC S K + F + GAH + Q+ ++ +RK A
Sbjct: 158 TGGRDGNIMMWDTRC--SKK----DGFYRQVNQITGAHNAIDKQTPSKMKKRKPSIRGLA 211
Query: 219 ASM----SITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWPHAESS-SAKET 272
S+ S+T V++ +DE +I +A AV+ +VK WD R N A P T
Sbjct: 212 PSVDSQQSVTVVIF-QDEYTIISAGAVDGVVKIWDLRKNYSAYRQDPVPVKHFPYPGNST 270
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL D G L ASC D +Y++N L P+ F G + +FY+K+ + P+
Sbjct: 271 RKLGYSSLVLDPTGTNLFASCTDDNVYMFNATGLKTDPVSIFRGHQNSTFYIKASVSPDG 330
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSGSSD +AY+WQV+ P A P+ L H EVT+V WC ++ KI T SDD TVR+W
Sbjct: 331 QFLLSGSSDHSAYIWQVSDPMAAPVTLMGHCQEVTSVAWCQSDFTKIATCSDDNTVRVWR 390
Query: 393 LE 394
L+
Sbjct: 391 LK 392
>UNIPROTKB|E2QT91 [details] [associations]
symbol:DTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0019985 "translesion synthesis" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005813 GO:GO:0009411 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0031572
GO:GO:0006513 GO:GO:0031464 GO:GO:0031465 GO:GO:0019985
Ensembl:ENSCAFT00000019500 Uniprot:E2QT91
Length = 731
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 129/362 (35%), Positives = 193/362 (53%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F HI AV++E+G+V L+++ + +R+ K +W+AH
Sbjct: 47 GVPVPPFGCTFSSAPNMEHILAVANEEGFVRLYNTESQ-----AYRKKCVK----EWMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS------KRVSRRKAA 219
+G RDG+ +WD RC N + F + GAH L Q+ K+ S+ A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTLDKQTPSKPKKKQNSKGLAP 211
Query: 220 SM----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
S+ S+T VL+ +DE ++ +A AV+ ++K WD R Q P A S T
Sbjct: 212 SVDFQQSVTVVLF-QDENTLISAGAVDGVIKIWDLRKNYTAYRQE-PIASKSFLYPGSST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICPN 331
R G SSL DS G L A+C D IY++N+ L P + F+G + +FYVKS + P+
Sbjct: 270 RKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPAVAIFNGHQNSTFYVKSSLSPD 329
Query: 332 ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
++SGSSD AY+W+V+ P P L+ H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 DQFLVSGSSDEAAYIWKVSTPWHPPTVLQGHSQEVTSVCWCPSDFTKIATCSDDNTLKIW 389
Query: 392 SL 393
L
Sbjct: 390 RL 391
>UNIPROTKB|F1S2V6 [details] [associations]
symbol:DTL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985
GeneTree:ENSGT00530000064210 OMA:ICTYFHR EMBL:CU861577
EMBL:CU861924 Ensembl:ENSSSCT00000016993 Uniprot:F1S2V6
Length = 731
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 131/365 (35%), Positives = 195/365 (53%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F HI AV++E+G+V L+++ + K I +W+AH
Sbjct: 47 GVPVPPFGCTFSSAPSMEHILAVANEEGFVRLYNTES---------QTGRKKCIKEWMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELMGTCKGHQCSLKSVAFSKFEKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLSQS------KRVSRRKAA 219
+G RDG+ +WD RC N + F + GAH L Q+ K+ S+ A
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTLDKQTPSKPKKKQNSKGLAP 211
Query: 220 SM----SITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQ-----ITQAWPHAESSSA 269
S+ S+T VL+ +DE ++ +A AV+ ++K WD R N A ++ +P+ SS
Sbjct: 212 SVDSQQSVTVVLF-QDENTLVSAGAVDGVIKIWDLRKNYTAYRQEPIASKCFPYPGSS-- 268
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI 328
TR G SSL DS G L A+C D IY++N+ L P + F+G + +FYVKS I
Sbjct: 269 --TRKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPAVAIFNGHQNSTFYVKSSI 326
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P+ ++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+
Sbjct: 327 SPDDQFLVSGSSDEAAYIWKVSTPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTL 386
Query: 389 RLWSL 393
++W L
Sbjct: 387 KVWRL 391
>UNIPROTKB|F5GZ90 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
HGNC:HGNC:30288 IPI:IPI01011401 ProteinModelPortal:F5GZ90
SMR:F5GZ90 Ensembl:ENST00000542077 UCSC:uc010ptb.2
ArrayExpress:F5GZ90 Bgee:F5GZ90 Uniprot:F5GZ90
Length = 688
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 129/358 (36%), Positives = 190/358 (53%)
Query: 52 PPLAVSFCKTSKN-SHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNA 110
P L V + + N H+ AV++E+G+V L+++ + SF K +W+AH NA
Sbjct: 10 PQLGV--LRNAPNMEHVLAVANEEGFVRLYNTESQ--SF-------RKKCFKEWMAHWNA 58
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS 170
+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ + +G
Sbjct: 59 VFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFCTGG 118
Query: 171 RDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK--------AASM- 221
RDG+ +WD RC N + F + GAH S + S+ K A S+
Sbjct: 119 RDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAPSVD 172
Query: 222 ---SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKETRLH 275
S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S TR
Sbjct: 173 FQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGSSTRKL 230
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHI 335
G SSL DS G L A+C D IY++N+ L P+ F+G + +FYVKS + P+ +
Sbjct: 231 GYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFL 290
Query: 336 LSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W L
Sbjct: 291 VSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWRL 348
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 121/352 (34%), Positives = 182/352 (51%)
Query: 52 PPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAI 111
PP +F + AV++E+G+V++F++ K S + +W AH NA+
Sbjct: 52 PPFGCTFSSAHGQQNCLAVANEEGFVTIFNTGEKQSSV-----------LKEWQAHDNAV 100
Query: 112 FDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
FD+ W+ ++TASGDQT ++WD G GH S+KS+ + + +G R
Sbjct: 101 FDIAWVPGTNCLVTASGDQTARLWDVITGDLLGTFKGHQCSLKSVAFYKQEKAVFSTGGR 160
Query: 172 DGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQ--SKRVSRRKA------ASMSI 223
DG+ IWD RC S K + F + GAH+ + + + +R+ + +
Sbjct: 161 DGNIMIWDTRC--SKK----DGFYRQVKQISGAHMKPERFTPQTKKRRGMAPPVDSQQGV 214
Query: 224 TSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWP-HAESSSAKETRLHGISSLS 281
T VL+ DE + ++ AV+ I+K WD R N A P A TR G S LS
Sbjct: 215 TVVLFC-DETKLISSGAVDGIIKMWDLRRNYTAYHQNPLPLQAYPYPGSCTRKLGYSGLS 273
Query: 282 QDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSD 341
D G L ++C D IY++N+ L P+ FSG SFYVKS + P+ + SGSSD
Sbjct: 274 LDYTGSRLFSNCTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQFLASGSSD 333
Query: 342 GNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
N Y+W+++ P+ P+ L+ H EVT+V WCP + KI + SDD TVR+W L
Sbjct: 334 HNVYIWKISDPKQAPMMLQGHSQEVTSVAWCPTDFTKIASCSDDNTVRIWRL 385
>FB|FBgn0013548 [details] [associations]
symbol:l(2)dtl "lethal-(2)-denticleless" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 EMBL:AE013599
GO:GO:0005737 GO:GO:0006950 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0007049
KO:K11790 GeneTree:ENSGT00530000064210 EMBL:X83414 EMBL:X98094
EMBL:AY121647 PIR:S51748 RefSeq:NP_524871.1 UniGene:Dm.1775
ProteinModelPortal:Q24371 SMR:Q24371 MINT:MINT-969616 STRING:Q24371
PaxDb:Q24371 EnsemblMetazoa:FBtr0072085 GeneID:46326
KEGG:dme:Dmel_CG11295 UCSC:CG11295-RA FlyBase:FBgn0013548
InParanoid:Q24371 OMA:IWDIRAN OrthoDB:EOG42FQZF PhylomeDB:Q24371
GenomeRNAi:46326 NextBio:838821 Bgee:Q24371 GermOnline:CG11295
Uniprot:Q24371
Length = 769
Score = 443 (161.0 bits), Expect = 4.2e-41, P = 4.2e-41
Identities = 105/353 (29%), Positives = 180/353 (50%)
Query: 50 ETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQN 109
E P + F HI A+++EDG ++L D+ ++ + + E++ + H N
Sbjct: 50 EPPIFSAKFANCDGYRHILAIANEDGKITLQDTTQR------NHQPEEQSLVGPQ-CHFN 102
Query: 110 AIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNSDILV 167
A+FDL W ++ASGD T ++W+ G + +GHT S+KS T+ +
Sbjct: 103 AVFDLEWAPGQMRFVSASGDHTARLWEVAGSGIRGLNSYVGHTRSVKSAAFKRTDPAVFA 162
Query: 168 SGSRDGSFAIWDLRCK-SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR-KAA----SM 221
+G RDG+ IWD+R + ++ ++ ++S +SQ K+ +R K A S
Sbjct: 163 TGGRDGAILIWDIRANLNMDLTSRVDNCIYSGHTGGPGTPVSQRKQRTRTPKMAGGTTSS 222
Query: 222 SITSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWPHAESSSAKETRLHGISSL 280
SIT + + +D ++ + A + ++K WD R N A + P + A + G ++L
Sbjct: 223 SITGLAF-QDNDTLISCGAGDGVIKVWDLRRNYTAYKKEPLPRHKLPYAGSSTFRGFTNL 281
Query: 281 SQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSS 340
D++G L A+CMD+ IY YN+ + P+ + G +FY+KS + P+ ++LSGSS
Sbjct: 282 IVDASGTRLYANCMDNTIYCYNLASYSQRPLACYKGLLNSTFYIKSCLSPDGKYLLSGSS 341
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
D AY+W ++ + + L H EVT V W + IVT SDD ++W +
Sbjct: 342 DERAYIWNLDHAEEPLVALAGHTVEVTCVAWGSSHDCPIVTCSDDARHKIWRI 394
>WB|WBGene00011318 [details] [associations]
symbol:cdt-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040026 "positive regulation
of vulval development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0040018 GO:GO:0040035 GO:GO:0040027 GO:GO:0040026 KO:K11790
GeneTree:ENSGT00530000064210 EMBL:Z78413 eggNOG:NOG254851
RefSeq:NP_506685.2 ProteinModelPortal:Q22059 SMR:Q22059
STRING:Q22059 EnsemblMetazoa:T01C3.1 GeneID:179995
KEGG:cel:CELE_T01C3.1 UCSC:T01C3.1 CTD:179995 WormBase:T01C3.1
HOGENOM:HOG000019502 InParanoid:Q22059 OMA:ATIHNFY NextBio:907682
Uniprot:Q22059
Length = 682
Score = 339 (124.4 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 119/410 (29%), Positives = 193/410 (47%)
Query: 18 LNGFKARKRPYFGDVVTDFTEIGAVTVEHHGEETPP----LAVSFCKTSKNSHIFAVSDE 73
L+ KARKR Y + + E+ + ET + F HI + D+
Sbjct: 4 LHSTKARKR-YLRYPSSIYEELESKHYSMPAGETDDHDTWVTARFSPHLNQEHILYMGDD 62
Query: 74 DGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWI-KEDTNILTASGDQTI 132
G + +FD R+ F E+ ++ + AH AI D+ + ++++ I++ SGD TI
Sbjct: 63 PGNIGIFDVRK----FQDRSVPLEERQLYFFPAHDGAIMDVVGVPQKESQIVSISGDSTI 118
Query: 133 KIWDAEKK---KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPK-- 187
+ WD + + + GH GS++S+C P + ++ V+G RD IWD+R + K
Sbjct: 119 RCWDLNQSTLDRKSQVFFGHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDMRVSTVKKME 178
Query: 188 SNCAESFV-FSSAVVKGAHLLSQSKRVSRRKAASMS---ITSVLYLKDEVSIATASA-VN 242
+C + + + +A K + +L+ S+ KA ++ +TSVL+L DE +A+AS +
Sbjct: 179 EDCRMATITYKTAHPKPSKVLTSGTPKSKAKAKTIEGYKVTSVLFL-DEHHVASASENAD 237
Query: 243 SIVKFWD----TRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI 298
S ++ WD TRN + Q + +S+ K +G++ L+ D G L ASC D I
Sbjct: 238 SGIRVWDIRKPTRNGEGQPARILK-VPTSNKKS---YGVTCLTLDRFGNRLFASCTDSSI 293
Query: 299 YLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW----QVN---- 350
+ Y+V PI ++G I +FY + P + I GS D A VW Q N
Sbjct: 294 FEYSVPSESVSPINSYTGATIHNFYTQVACSPVSDVIACGSEDSRAVVWDLQDQYNYMND 353
Query: 351 KPQADPI-----KLK--SHDGEVTAV-NWCPNEAGKIVTSSDDYTVRLWS 392
+ D I KL S DG + V N + G S D+ VR+WS
Sbjct: 354 RKLPDDIDKRRTKLPRFSCDGHLKQVLNVGWSSRGTYFMSCDEGGVRIWS 403
Score = 48 (22.0 bits), Expect = 6.6e-30, Sum P(2) = 6.6e-30
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 424 MNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKKKIPSFDTKEAFEKT 481
++G P +GS R + L I ++ PK + + R+P A+ K+ SF + T
Sbjct: 466 LSGSPQ-KNRGSKRPI-FESPLKSICTNSPKPLRLNRSPRAKMSKL-SFSPPSPLQPT 520
>POMBASE|SPAC17H9.19c [details] [associations]
symbol:cdt2 "WD repeat protein Cdt2" species:4896
"Schizosaccharomyces pombe" [GO:0000077 "DNA damage checkpoint"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IGI;IMP] [GO:0006279 "premeiotic DNA
replication" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0030674 "protein binding, bridging"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033314 "mitotic DNA replication checkpoint" evidence=IGI]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0051443 "positive
regulation of ubiquitin-protein ligase activity" evidence=IMP]
[GO:0008180 "signalosome" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
PomBase:SPAC17H9.19c GO:GO:0005634 GO:GO:0007126 GO:GO:0000077
EMBL:CU329670 GO:GO:0034613 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006261 GO:GO:0042787
GO:GO:0033314 GO:GO:0051443 EMBL:L75944 PIR:T37884
RefSeq:NP_593588.1 ProteinModelPortal:Q10990 IntAct:Q10990
STRING:Q10990 EnsemblFungi:SPAC17H9.19c.1 GeneID:2542374
KEGG:spo:SPAC17H9.19c OMA:ISSCSAN OrthoDB:EOG4D565X
NextBio:20803433 GO:GO:0006279 Uniprot:Q10990
Length = 490
Score = 308 (113.5 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 109/355 (30%), Positives = 167/355 (47%)
Query: 58 FCKT-SKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKAR-ISDWVAHQNAIFDLC 115
FC + N + AV E G + LFDSR + EN AR I W+AH NAIF +
Sbjct: 131 FCLGFANNESLLAVCTETGALELFDSRFYDRQ---NEENQPSARRIHGWLAHNNAIFSVN 187
Query: 116 WIKEDTNILTASGDQTIKIWDAEKKKCTGAL--MG----HTGSIKSL--CSH-PTNSDIL 166
+ K+D+ + T+SGDQT K++D ++C L G H+ S+K + C+ P N L
Sbjct: 188 FSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSHSVKQVNFCNDSPYN---L 244
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSV 226
VS SRDGS WD+R E F ++ AH S R SITS
Sbjct: 245 VSCSRDGSIIFWDMRTHGITIDG--EHFQKPVLRIRKAH--ENSGR-------DCSITSA 293
Query: 227 LYLKDEVS-IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKET-RLHGISSLSQDS 284
+L S + ++ + NS +K WD R + + P A + + R G++++
Sbjct: 294 TWLPQSTSQVISSCSANSALKLWDLRTVHT--VRPLPAATTPELTTSKRDFGVTNVCTSP 351
Query: 285 NGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG--CRIESFYVKSEICPNASHILSGSS-- 340
+G + A+ D IY Y+ L+ G + + RI SFYVK P+ + + G
Sbjct: 352 DGERIYAASRDSIIYEYSSRHLNSGFCKTYKDPRLRISSFYVKLACSPDGATLACGGGVQ 411
Query: 341 D--GNAYVWQVNKPQADPIKLKS-HDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
D V+ + + L H +VTAV+W + G++ + SDD +VR+W+
Sbjct: 412 DKTSGVVVFDTTRNCSSSAMLTGGHTKDVTAVDW--SSEGQLASISDDGSVRVWN 464
>RGD|1310439 [details] [associations]
symbol:Dtl "denticleless E3 ubiquitin protein ligase homolog
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0009411 "response to UV"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=IEA;ISO] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IEA;ISO] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1310439 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 IPI:IPI00951417
Ensembl:ENSRNOT00000064454 ArrayExpress:D4A550 Uniprot:D4A550
Length = 213
Score = 267 (99.0 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 55/170 (32%), Positives = 84/170 (49%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +FC HI AV++E+G+V L+++ + C +E W+AH
Sbjct: 47 GVPVPPFGCTFCTAPSMEHILAVANEEGFVRLYNTESQTSKKTCFKE---------WMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELMGTCKGHQCSLKSVAFSKFQKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK 217
+G RDG+ IWD RC N + F + GAH + + S+ K
Sbjct: 158 TGGRDGNIMIWDTRC------NKKDGFYRQVNQISGAHNTADKQTPSKPK 201
>ASPGD|ASPL0000048435 [details] [associations]
symbol:AN2148 species:162425 "Emericella nidulans"
[GO:0030674 "protein binding, bridging" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0006279
"premeiotic DNA replication" evidence=IEA] [GO:0033314 "mitotic DNA
replication checkpoint" evidence=IEA] [GO:0000077 "DNA damage
checkpoint" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001307 OrthoDB:EOG4D565X
EMBL:AACD01000034 RefSeq:XP_659752.1 ProteinModelPortal:Q5BBD2
EnsemblFungi:CADANIAT00008826 GeneID:2875667 KEGG:ani:AN2148.2
eggNOG:NOG254851 HOGENOM:HOG000167540 OMA:TVYAYST Uniprot:Q5BBD2
Length = 717
Score = 187 (70.9 bits), Expect = 1.8e-19, Sum P(4) = 1.8e-19
Identities = 47/132 (35%), Positives = 72/132 (54%)
Query: 54 LAVSFCKTSKNSH-IFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIF 112
LA+ FC + N++ + A+ DE+G + L DS + + K+ ++ + H NAI
Sbjct: 240 LALPFCTAACNTNTLVAIGDEEGGIRLLDSAKN------DKIGFSKSYLT-FRPHANAIM 292
Query: 113 DLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD-ILVSGSR 171
DL + +D + TASGDQT + D +K L H S+K + P +D +L + SR
Sbjct: 293 DLDFSSDDMLLATASGDQTAIVIDMATQKPVYCLSNHVSSLKQVKFQPAANDKVLATCSR 352
Query: 172 DGSFAIWDLRCK 183
DG+ IWDLRCK
Sbjct: 353 DGNVNIWDLRCK 364
Score = 91 (37.1 bits), Expect = 1.8e-19, Sum P(4) = 1.8e-19
Identities = 31/122 (25%), Positives = 55/122 (45%)
Query: 201 VKGAH-----LLSQSKRVSRRKAASMSITSVLYLKD--EVSIATASAVNSIVKFWDTRNL 253
V GAH +++ K + + +++TS+ +L E TAS N+ V+ WD R
Sbjct: 400 VHGAHAWMPQIMTPEKTEPQVARSDITVTSLAFLPPGRENLFVTASEANACVRLWDLRTA 459
Query: 254 KAQITQAWPHAESSSAKETRLH------GISSLSQDSNGVFLTASCMDHRIYLYNVLQLD 307
+ + P S+ +E H G++S++ +G L + C D +Y Y+ L
Sbjct: 460 HSN-RRGRPALPLSTTREPDSHIKYRRFGVTSIALGGDGSRLYSLCRDGTVYAYSTSHLV 518
Query: 308 KG 309
G
Sbjct: 519 LG 520
Score = 75 (31.5 bits), Expect = 1.8e-19, Sum P(4) = 1.8e-19
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 359 LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
++ H EV+ V W + G++VT SDDY+ R W
Sbjct: 651 IEGHKKEVSGVTWTVD--GELVTVSDDYSARCW 681
Score = 38 (18.4 bits), Expect = 1.8e-19, Sum P(4) = 1.8e-19
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 309 GPIQHFSG--CRIESFYVKSEI---CPNASHILS-GSSDGNAYVWQVNKPQADP 356
GP+ F R+ SFYVK + + +L+ GS + A ++ ++ DP
Sbjct: 544 GPLYGFRHPRLRVSSFYVKIGVRKASGDKPEMLAVGSGEPCAVIFPTDERFLDP 597
>FB|FBgn0038927 [details] [associations]
symbol:CG6015 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12816 GeneTree:ENSGT00530000063583 EMBL:AY069490
RefSeq:NP_651005.1 UniGene:Dm.20226 SMR:Q9VD52 IntAct:Q9VD52
STRING:Q9VD52 EnsemblMetazoa:FBtr0084183 GeneID:42593
KEGG:dme:Dmel_CG6015 UCSC:CG6015-RA FlyBase:FBgn0038927
InParanoid:Q9VD52 OMA:PEDIEGF OrthoDB:EOG493202 GenomeRNAi:42593
NextBio:829587 Uniprot:Q9VD52
Length = 576
Score = 230 (86.0 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 67/304 (22%), Positives = 130/304 (42%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KKKCTGALMGHTGSIKS 155
KA I W H I + W + ++L + S D +K+W+ +++C GH +IK
Sbjct: 275 KAHIHTWSGHNKGISSIRWFPKTAHLLLSGSMDCRVKLWEVYGERRCIRTFSGHRQAIKD 334
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKG---AHLL---SQ 209
+ + ++ L S S D +WD F HL +
Sbjct: 335 IAWNNRGTNFL-SASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTS 393
Query: 210 SKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWP-HAESSS 268
K++ S I Y + S++T + V+ +F T + K+ W +
Sbjct: 394 DKKIICWDTRSGDIVQE-YDRHLGSVSTITFVDDNRRFVTTSDDKSMRIWEWDIPVDMKY 452
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK-GPIQHFSGCRIESFYVKSE 327
+ +H + +++ NG ++ +D++I +++ L K + F+G + + + +
Sbjct: 453 IADPTMHSMPAVTLAPNGKWMACQSLDNKIVIFSALNRFKMNRKKTFTGHMVSGYACQLD 512
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYT 387
P+ S+++SG DG Y+W + K ++HDG + W P+EA K+VT+ D
Sbjct: 513 FSPDMSYLVSGDGDGKCYIWDWKTTKMYK-KWQAHDGVCISALWHPHEASKVVTAGWDGQ 571
Query: 388 VRLW 391
++ W
Sbjct: 572 IKYW 575
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 33/90 (36%), Positives = 46/90 (51%)
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKS- 155
E+ I + H+ AI D+ W TN L+AS D+ IK+WDAE TG ++ + K
Sbjct: 318 ERRCIRTFSGHRQAIKDIAWNNRGTNFLSASYDRYIKLWDAE----TGDVVSRFTTRKMP 373
Query: 156 LCS--HPTNSD--ILVSGSRDGSFAIWDLR 181
C HP NS + V+G+ D WD R
Sbjct: 374 FCVKFHPDNSKQHLFVAGTSDKKIICWDTR 403
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 215 (80.7 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 69/307 (22%), Positives = 140/307 (45%)
Query: 98 KARISDWVAHQNAIFDL-CWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKS 155
K ++ W H + + + K +L+ S D IK+W+ +++C +GH+ +++
Sbjct: 277 KKQLHVWTGHTKGVSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRD 336
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFVFSSAVVKGAHLLSQSKR 212
+C + + + L S + D +WD +C S + V + +LL
Sbjct: 337 VCFNNSGTQFL-SAAYDRYIKLWDSETGQCISRFTNRKVPYCVKFNPDEDKQNLLVAG-- 393
Query: 213 VSRRKAASMSITS--VL--YLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWP-HAESS 267
+S +K I S V+ Y + ++ T + V+ +F T + K+ W A+
Sbjct: 394 MSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFK 453
Query: 268 SAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGPIQHFSGCRIESFYV 324
E +H + +++ NG +L MD++I ++ N +L+K I F G + +
Sbjct: 454 YIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKI--FKGHMVAGYAC 511
Query: 325 KSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+ + P+ S+++SG +DG +W + ++K+HD + W P+E K++T
Sbjct: 512 QVDFSPDMSYVVSGDADGKLNIWDWKTTKLYH-RIKAHDKVCISALWHPHETSKVITCGW 570
Query: 385 DYTVRLW 391
D ++LW
Sbjct: 571 DGQIKLW 577
>UNIPROTKB|G4MYR8 [details] [associations]
symbol:MGG_08141 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001232 RefSeq:XP_003715104.1
ProteinModelPortal:G4MYR8 EnsemblFungi:MGG_08141T0 GeneID:2678356
KEGG:mgr:MGG_08141 Uniprot:G4MYR8
Length = 747
Score = 180 (68.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 62/216 (28%), Positives = 108/216 (50%)
Query: 59 CKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIK 118
C TS + +F + D+ G V L D+ + P + +K + W AH NA+ D+
Sbjct: 281 CNTS--NMVF-IGDDMGEVRLLDT--ETPG----DDGFKKCHLR-WTAHGNAVTDVALSS 330
Query: 119 EDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTN--SDILVSGSRDGSFA 176
+D TAS D++ +WD +K AL+ S KS+ P S+++ + +RDG
Sbjct: 331 DDLRAATASADRSGIVWDMMTQKPL-ALLDCGSSAKSIRFQPGQGVSNVVATSTRDGIVQ 389
Query: 177 IWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVS------RRKAASMS------IT 224
IWDLRCK+S S ++ V ++ A++ + VS K++S S +T
Sbjct: 390 IWDLRCKNSRYSEWSQGTVDEEEYLRVANIPPWNTFVSGSTVPWATKSSSSSQSSRTVVT 449
Query: 225 SVLYL---KDEVSIATASAVNSIVKFWDTRNLKAQI 257
++ +L K+ + I++ A N+ +K WD R ++ Q+
Sbjct: 450 ALEFLPAGKEHLVISSCEA-NATIKLWDIRAIRHQL 484
Score = 100 (40.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 32/121 (26%), Positives = 62/121 (51%)
Query: 201 VKGAHLLSQSKRVSRRKAASMSITSVLYL---KDEVSIATASAVNSIVKFWDTRNLKAQI 257
V G+ + +K S +++ +T++ +L K+ + I++ A N+ +K WD R ++ Q+
Sbjct: 426 VSGSTVPWATKSSSSSQSSRTVVTALEFLPAGKEHLVISSCEA-NATIKLWDIRAIRHQL 484
Query: 258 ----TQAWPH---AESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP 310
+ P A S K +R GISS++ ++G L A C D+ +Y Y+ + G
Sbjct: 485 EANNNASKPLSCVAPPPSHKASRNWGISSMTLGTDGARLYALCKDNTVYAYSTAHMALGH 544
Query: 311 I 311
+
Sbjct: 545 V 545
Score = 68 (29.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 359 LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ H E T+V++ + G++V++SDD+T R+W+
Sbjct: 676 IHGHGKEATSVSFTRD--GRLVSASDDFTARVWA 707
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 76 YVSLFDSRRKLPSFACHRENAEKARISD 103
+ F +RK+P+ C + KA +++
Sbjct: 103 FTRFFHGQRKVPAVRCALNDITKASLNE 130
Score = 41 (19.5 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIK 358
++S S D A VW ++ QA ++
Sbjct: 694 LVSASDDFTARVWAEDREQAKQLR 717
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 142 (55.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 277 ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP-NASHI 335
I+S S ++ ++ + ++ I L+N+ + D + + G + F ++S + I
Sbjct: 446 ITSFSLSNDNKYILVNLLNQEIRLWNI-EGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFI 504
Query: 336 LSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
SGS D Y+W + + ++L H G V V+W P + ++SDD T+R+W L+
Sbjct: 505 ASGSEDSQVYIWHRSTGKLI-VELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 102 (41.0 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 105 VAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSL-CSHPTNS 163
V H + + W +D +LT ++ I+ WD + C M G I + C +
Sbjct: 316 VGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVH--MYEKGGISPISCGWYPDG 373
Query: 164 DILVSGSRDGSFAIWDL 180
+++G D S +WDL
Sbjct: 374 QGIIAGMTDRSICMWDL 390
Score = 60 (26.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 28/128 (21%), Positives = 54/128 (42%)
Query: 59 CKTSKNSHIFAVSDEDGYVSLFDSRRKLPS-FAC--HRENAEKARISDWVAHQNAIFDLC 115
C + HI D + + DS L S C H+ ++ A+I + +H + ++ L
Sbjct: 226 CLVENSLHI--QRDSCVFHNTLDSDLSLYSDHQCGKHQIPSQTAQILE--SHTDEVWFLQ 281
Query: 116 WIKEDTNILTASGDQTIKIWDAEKK---KCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
+ + ++S DQT IW+ L+GH + ++ P + +L G+ +
Sbjct: 282 FSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEE 341
Query: 173 GSFAIWDL 180
WD+
Sbjct: 342 -VIRRWDV 348
Score = 45 (20.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 116 WIKEDTNILTASGDQTIKIWDAE--KKKC 142
W + I+ D++I +WD + +K+C
Sbjct: 369 WYPDGQGIIAGMTDRSICMWDLDGREKEC 397
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 192 (72.6 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 131 RSSVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 187
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 188 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 246
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 247 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 305
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 306 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 365
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 366 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 420
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 421 AVWHPHETSKVITCGWDGLIKLW 443
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 192 (72.6 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 134 RSSVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 190
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 191 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 249
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 250 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 308
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 309 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 368
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 369 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 423
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 424 AVWHPHETSKVITCGWDGLIKLW 446
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 189 (71.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 89/358 (24%), Positives = 154/358 (43%)
Query: 60 KTSKNSHIFAVSDEDGYVSL--FDSRRK-LPSFACHRENAEKARISDWVAHQNAIFDLCW 116
K NS I A + L + +R K L R + +A I H+ IF +
Sbjct: 4 KRPNNSVILAQEAKRSKNDLMAYTNRDKALLESGVRRTSNLQAPIMQLEGHEGEIFTAEF 63
Query: 117 IKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSF 175
E +L++ D+ I IW E + A+ GH+G++ P S I S D +
Sbjct: 64 HPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTC-STDKTL 122
Query: 176 AIWDLRCKSSPKSNCAE-SFVFS-SAVVKGAHLL---SQSKRV----SRRKAAS------ 220
A WD+ + +FV S +G LL S + + +R+K A+
Sbjct: 123 AFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESP 182
Query: 221 MSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSL 280
+T+V + D + +++ VK WD R +A + H+++ I+ +
Sbjct: 183 FQVTAVCF-GDTGEQVISGGIDNEVKIWDIRK-QAVLHHLRGHSDT----------ITGM 230
Query: 281 SQDSNGVFLTASCMDHRIYLYNVLQLDKGP--IQHFSGCR--IESFYVKSEICPNASHIL 336
S G F+ + MD+ + +++V G ++ F G + E ++ P + I
Sbjct: 231 SLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKIT 290
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
SGS+D + Y+W VN + KL H+G V AV++ P E I++ S D T+ L ++
Sbjct: 291 SGSADRHVYIWDVNTRRI-LYKLPGHNGSVNAVDFSPKEP-LILSGSSDKTLYLGEID 346
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 62/264 (23%), Positives = 104/264 (39%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++I T S D+T+ WD + GH + S+ +L
Sbjct: 97 HSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLL 156
Query: 167 VSGSRDGSFAIWDLRCK------SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA- 219
SGS D + IWD R K SP A F + V + ++ K RK A
Sbjct: 157 CSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 220 -------SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKA--QITQAWPHAESSSAK 270
S +IT + L E +A+++ ++ WD R + + + + + K
Sbjct: 217 LHHLRGHSDTITG-MSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEK 275
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
L S D +T+ D +Y+++V L K P H F K
Sbjct: 276 NL-LRCAWSPGSDK----ITSGSADRHVYIWDVNTRRILYKLP-GHNGSVNAVDFSPKEP 329
Query: 328 ICPNASHILSGSSDGNAYVWQVNK 351
+ ILSGSSD Y+ ++++
Sbjct: 330 L------ILSGSSDKTLYLGEIDE 347
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 194 (73.4 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 70/323 (21%), Positives = 140/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ ++
Sbjct: 266 RSTMPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGER 322
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 381
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 382 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 440
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 441 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 500
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 501 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 555
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 556 AVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 194 (73.4 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 71/323 (21%), Positives = 140/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTN-ILTASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + + +L+ S D IK+W+ +
Sbjct: 267 RSTMPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDR 323
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH +++ +C + + L S + D +WD +C S + V F
Sbjct: 324 RCLRTFIGHGKAVRDICFNNAGTRFL-SAAYDRYIKLWDTETGQCISRFTNRKVPYCVKF 382
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 383 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 441
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 442 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 501
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +DG N + W+ K + ++K+HD
Sbjct: 502 I--FKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTTKLYS---RIKAHDKVCIG 556
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 557 AVWHPHETSKVITCGWDGLIKLW 579
>TAIR|locus:2194589 [details] [associations]
symbol:AT1G10580 "AT1G10580" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 OMA:KRQKRGK
EMBL:BT030336 IPI:IPI00537876 RefSeq:NP_172528.2 UniGene:At.14984
ProteinModelPortal:A4FVN8 SMR:A4FVN8 IntAct:A4FVN8 STRING:A4FVN8
PaxDb:A4FVN8 PRIDE:A4FVN8 EnsemblPlants:AT1G10580.1 GeneID:837599
KEGG:ath:AT1G10580 TAIR:At1g10580 InParanoid:A4FVN8
PhylomeDB:A4FVN8 ProtClustDB:CLSN2690864 Genevestigator:A4FVN8
Uniprot:A4FVN8
Length = 573
Score = 192 (72.6 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 69/308 (22%), Positives = 129/308 (41%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKK-KCTGALMGHTGSIKS 155
K + W H + + + + ++L ++G D +KIWD KC MGH +++
Sbjct: 272 KRLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRD 331
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKS--SPKSNCAESFV--FSSAVVKGAHLLS--Q 209
+C S L +G D + WD S S +V + K LL+
Sbjct: 332 ICFSNDGSKFLTAGY-DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMS 390
Query: 210 SKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
K++ + + +T Y + ++ T + V++ +F + + K+ + W
Sbjct: 391 DKKIVQWDINTGEVTQE-YDQHLGAVNTITFVDNNRRFVTSSDDKS--LRVWEFGIPVVI 447
Query: 270 K---ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNV---LQLDKGPIQHFSGCRIESFY 323
K E +H + S+S NG +L A +D++I +Y+ QL+K + F+G + +
Sbjct: 448 KYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKK--KRFAGHIVAGYA 505
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS 383
+ P+ ++SG +G + W + LK H+G W P E K+ T
Sbjct: 506 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT-LKCHNGVCIGAEWHPLEQSKVATCG 564
Query: 384 DDYTVRLW 391
D ++ W
Sbjct: 565 WDGLIKYW 572
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 192 (72.6 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 266 RSSVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 322
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 381
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 382 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 440
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 441 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 500
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 501 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 555
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 556 AVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 191 (72.3 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 266 RSTVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 322
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 381
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 382 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 440
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 441 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 500
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 501 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 555
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 556 AVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 191 (72.3 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 266 RSTVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 322
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 323 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 381
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 382 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 440
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 441 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 500
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 501 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 555
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 556 AVWHPHETSKVITCGWDGLIKLW 578
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 70/323 (21%), Positives = 139/323 (43%)
Query: 83 RRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE-KK 140
R +P C+ K +I W H + + ++L + S D IK+W+ +
Sbjct: 350 RSTVPPEKCY---LPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDR 406
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL---RCKSSPKSNCAESFV-F 196
+C +GH+ +++ +C + + L S + D +WD +C S + V F
Sbjct: 407 RCLRTFIGHSKAVRDICFNTAGTQFL-SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKF 465
Query: 197 SSAVVKGAHLLS--QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
+ K ++ K++ + S I Y + ++ T V+ +F T + K
Sbjct: 466 NPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQE-YDRHLGAVNTIVFVDENRRFVSTSDDK 524
Query: 255 AQITQAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGP 310
+ W + E +H + +++ NG +L MD++I ++ N +L+K
Sbjct: 525 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 584
Query: 311 IQHFSGCRIESFYVKSEICPNASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTA 368
I F G + + + + P+ S+++SG +G N + W+ K + + K+HD
Sbjct: 585 I--FKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIG 639
Query: 369 VNWCPNEAGKIVTSSDDYTVRLW 391
W P+E K++T D ++LW
Sbjct: 640 AVWHPHETSKVITCGWDGLIKLW 662
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 185 (70.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 61/307 (19%), Positives = 131/307 (42%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNI-LTASGDQTIKIWDA-EKKKCTGALMGHTGSIKS 155
K + + H + L W + ++ L+ S D IK+W+ ++++ GH ++
Sbjct: 265 KKLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVRE 324
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPK----SNCAESFVFSSAVVKGAHLL--SQ 209
+ + ++ L S S D +WD + + + K L Q
Sbjct: 325 VAFNNEGTEFL-SASFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKNHMFLVGMQ 383
Query: 210 SKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWP-HAESSS 268
+K++ + + S I Y + ++ + + + +F T + K+ W ++
Sbjct: 384 NKKIIQWDSRSGEIVQE-YDRHLQAVNSITFFDKNRRFASTSDDKSVRIWEWEIPVDTKL 442
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK---GPIQHFSGCRIESFYVK 325
+ LH I ++++ N ++ CMD+RI L+ ++ DK + F G +
Sbjct: 443 IQNVGLHAIPTMTKSPNDKWVVGQCMDNRIVLFQLVD-DKLRFSKKKAFRGHNAAGYACN 501
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
+ P+ S ++SG +DG ++W + K K+HD A W P+E +++T+ D
Sbjct: 502 IDFSPDQSFLISGDADGKLFIWDWRTHKIVG-KWKAHDSTCIAALWHPHEKSRMITAGWD 560
Query: 386 YTVRLWS 392
+++W+
Sbjct: 561 GLIKMWN 567
Score = 45 (20.9 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 29/141 (20%), Positives = 55/141 (39%)
Query: 2 ATPKSESFFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVTVEHHGEETPPL-AVSFCK 60
+ PK + F S +N FK+ ++ + +T F E + H + + + +
Sbjct: 64 SNPKFDQLF-KPESGPVNHFKSEQQRSQKNTLTGFVEPAHLNEFHFNRQIRSFDTLGYAQ 122
Query: 61 --TSKNSHIFAVSD------EDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIF 112
T+++ V D E G VSLF+S++ N + A I + +
Sbjct: 123 NPTAESGTTHFVGDVKKAEAEKG-VSLFESKKTGGEKRKRVRNDDSADIDGYTGPWSRFI 181
Query: 113 DLCWIKEDTNILTASGDQTIK 133
D + + T L D+ +K
Sbjct: 182 DEKTVAKPTPELQKQMDEIVK 202
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 154 (59.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
I W H+ + + + TA D+ + +WD + CT GH G + S+ HP
Sbjct: 95 IRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHP 154
Query: 161 -TNSDILVSGSRDGSFAIWDLRCKSSPK 187
+N +IL+SGS D + +WDL K++ K
Sbjct: 155 DSNKNILISGSDDATVRVWDLNAKNTEK 182
Score = 119 (46.9 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 107 HQNAIF--DLCWIKEDTNIL--TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTN 162
H+ + D C + N+L T S D+T+++W+A K C G GH G I ++ +
Sbjct: 400 HKEVVLSLDTC-VSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 163 SDILVSGSRDGSFAIWDL 180
VSGS D + +W L
Sbjct: 459 FSFFVSGSGDRTLKVWSL 476
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 119 EDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+D + +A + I++WD E KC + GH G + + H + +L + D +W
Sbjct: 71 DDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGG-LLATAGADRKVLVW 129
Query: 179 DL 180
D+
Sbjct: 130 DV 131
Score = 93 (37.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 94 ENAEKARI---SDWVAHQNAIFDLCWIKEDTNILT-ASGDQTIKIWDAEKKKCTGALMGH 149
EN E+ + V + I D+ ++ ++ L A+ + ++++D C+ L GH
Sbjct: 341 ENVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGH 400
Query: 150 TGSIKSL--CSHPTNSDILVSGSRDGSFAIWDLRCKS 184
+ SL C + + ++V+GS+D + +W+ KS
Sbjct: 401 KEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKS 437
Score = 91 (37.1 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 54/268 (20%), Positives = 104/268 (38%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G E P + ++ C S + A + D V ++D F H K +S + H
Sbjct: 100 GHEGPVMGMA-CHASGG--LLATAGADRKVLVWDVDG---GFCTHYFRGHKGVVSSILFH 153
Query: 108 QNAIFDLCWIKEDTNIL-TASGDQTIKIWDAE----KKKCTGALMGHTGSIKSLCSHPTN 162
++ + NIL + S D T+++WD +KKC + H ++ S+
Sbjct: 154 PDS---------NKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDG 204
Query: 163 SDILVSGSRDGSFAIWDLR---CKSSPKS-NCAESFV-FSSAVVKGAHLLSQSKRVSRRK 217
+ +G RD +WDL CK++ + E+ SS + + S ++ S++K
Sbjct: 205 LTLFSAG-RDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKKK 263
Query: 218 AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGI 277
+ T Y +++ +V+ W + Q SS E G
Sbjct: 264 ESDSQAT---YF---ITVGE----RGVVRIWKSEGSICLYEQKSSDITVSSDDEESKRGF 313
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQ 305
++ + + L D + + Y+V++
Sbjct: 314 TAAAMLPSDHGLLCVTADQQFFFYSVVE 341
Score = 83 (34.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 50/215 (23%), Positives = 87/215 (40%)
Query: 192 ESFVFSSAV--VKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVS-IATASAVNSIVKFW 248
+ F F S V V+ L+ + V + I + +L DE +A A+ + V+ +
Sbjct: 332 QQFFFYSVVENVEETELVLSKRLVGYNE----EIADMKFLGDEEQFLAVATNLEE-VRVY 386
Query: 249 DTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK 308
D + A H E + +T +S N + +T S D + L+N
Sbjct: 387 DVATMSCSYVLAG-HKEVVLSLDT------CVSSSGNVLIVTGS-KDKTVRLWNATSKSC 438
Query: 309 -GPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ---VNKPQADPIKLKS--- 361
G +G + + K S +SGS D VW +++ +PI LK+
Sbjct: 439 IGVGTGHNGDILAVAFAKKSF----SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSV 494
Query: 362 ---HDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
HD ++ +V N++ + T S+D T +W L
Sbjct: 495 VAAHDKDINSVAVARNDS-LVCTGSEDRTASIWRL 528
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
I++GS D +W + H+G++ AV + V+ S D T+++WSL+
Sbjct: 419 IVTGSKDKTVRLWNATSKSCIGVGT-GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQ-ADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDY 386
+ N S + +GS D A +W++ P + LK H + +V + + ++T+S D
Sbjct: 507 VARNDSLVCTGSEDRTASIWRL--PDLVHVVTLKGHKRRIFSVEFSTVDQC-VMTASGDK 563
Query: 387 TVRLWSLEN 395
TV++W++ +
Sbjct: 564 TVKIWAISD 572
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 145 (56.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 29/87 (33%), Positives = 47/87 (54%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H I D+ W + + +++AS D+T+K+WD KC L GH+ + C S+++
Sbjct: 80 HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV-FCCDFNPPSNLI 138
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAES 193
VSGS D S IW+++ K+ A S
Sbjct: 139 VSGSFDESVKIWEVKTGKCLKTLSAHS 165
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 107 HQNAIFDLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H + +F C +N I++ S D+++KIW+ + KC L H+ I ++ + N +
Sbjct: 122 HSDFVF-CCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV-NFNCNGSL 179
Query: 166 LVSGSRDGSFAIWD 179
+VSGS DG IWD
Sbjct: 180 IVSGSYDGLCRIWD 193
Score = 79 (32.9 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGE--VTAVNWCPNEAGK-IVTSSDDYT 387
N S I+SGS DG +W Q ++ + +G V+ V + PN GK I+T++ D T
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQC--LRTLADEGNPPVSFVKFSPN--GKYILTATLDNT 231
Query: 388 VRLW 391
++LW
Sbjct: 232 LKLW 235
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 150 (57.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 37/117 (31%), Positives = 60/117 (51%)
Query: 277 ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP-NASHI 335
I+SLS +G F + I+L+++ K P++ FSG R + ++S ++S I
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLK-FSGHRQSKYVIRSCFGGLDSSFI 458
Query: 336 LSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
SGS D Y+W N P++ L H V V+W P + ++SDD T+R+W
Sbjct: 459 ASGSEDSQVYIW--NLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 81 (33.6 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 91 CHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIW---DAEKKKCTGALM 147
C R+ + VAH+N ++ + + + TAS D T IW D K + L
Sbjct: 207 CGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLE 266
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
H + + P ++ +L G+ + +WD+
Sbjct: 267 SHQNPVSFVSWSPDDTKLLTCGNAE-VLKLWDV 298
>DICTYBASE|DDB_G0289501 [details] [associations]
symbol:cdc40 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0006260 "DNA
replication" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0289501 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003676 EMBL:AAFI02000141
GO:GO:0000084 GO:GO:0000398 KO:K12816 OMA:KRQKRGK
RefSeq:XP_636182.1 ProteinModelPortal:Q54HF5 STRING:Q54HF5
EnsemblProtists:DDB0233421 GeneID:8627169 KEGG:ddi:DDB_G0289501
InParanoid:Q54HF5 ProtClustDB:CLSZ2429764 Uniprot:Q54HF5
Length = 595
Score = 183 (69.5 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 65/315 (20%), Positives = 130/315 (41%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAE-KKKCTGALMGHTGSIKS 155
K I ++ H + + +I + ++L ++G D T+KIWDA ++C MGH+ +++
Sbjct: 294 KKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGMDNTVKIWDAYGDRRCIQTYMGHSQAVRD 353
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLR---------------C-KSSPKSNCAESFVFSSA 199
+C L G D +WD C K +P + E F+ +
Sbjct: 354 ICFSNDGRRFLSCGY-DRQTRLWDTETGKILSSFTNGKIPYCIKFNPDDDKQEQFLCGGS 412
Query: 200 VVKGAHLLSQSKRVSRRKAASM-SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQIT 258
K +S ++ + + ++ ++ +L D T+S S+ + WD + I
Sbjct: 413 DKKIIQWDIKSNQIVQEYDQHLGAVNTITFLDDNRRFVTSSDDKSL-RVWDW-GIPVVIK 470
Query: 259 QAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVL-QLDKGPIQHFSGC 317
+ +H + +++ G + A +D++I +Y+ + + F G
Sbjct: 471 YI---------SDPSMHSMPAVALHPKGKWFAAQSLDNQILIYSARDRFRMNKKKRFLGH 521
Query: 318 RIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEA 376
+ + + P+ I SG S G A+ W + IK + +H+ + W P E
Sbjct: 522 NVSGYACQLGFSPDGKFIYSGDSTGKAFFWDWKTSKI--IKTINAHNNVCIGIEWAPLEP 579
Query: 377 GKIVTSSDDYTVRLW 391
K+ T S + ++LW
Sbjct: 580 SKVATCSWNNEIKLW 594
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 178 (67.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 76/316 (24%), Positives = 135/316 (42%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG--ALMGHTGSIKSLCS 158
I + H+ I+ + T + + D+ I +W+ + C L GH G+I L
Sbjct: 55 IMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGE-CINYSVLKGHKGTILEL-- 111
Query: 159 H-PTNSDILVSGSRDGSFAIWD---------LRCKSSPKSNCAES-----FVFSSAVVKG 203
H T+S+ + + D S +WD +R S ++C + V S + +
Sbjct: 112 HWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRS 171
Query: 204 AHLL-SQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWP 262
A + ++SK + +TSV + + T ++++++ WD RN Q P
Sbjct: 172 ARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGG-IDNVIRVWDIRN------QEDP 224
Query: 263 HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGCR-- 318
+S ++T I+S S +G +L ++ MD+ ++++ I+ F+G +
Sbjct: 225 LYTLASHQDT----ITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNN 280
Query: 319 IESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK 378
E +KS + I GSSD Y+W N Q L H G V V + PNE
Sbjct: 281 FEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYC-LPGHSGTVNEVTFHPNEP-I 338
Query: 379 IVTSSDDYTVRLWSLE 394
I + S D T+ L ++
Sbjct: 339 IASCSSDKTIYLGEIK 354
Score = 137 (53.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 68/263 (25%), Positives = 104/263 (39%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ I +L W + I TA D++I +WD+ K + + H+G + S C ++
Sbjct: 104 HKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLV 163
Query: 167 VSGSRDGSFAIWDLRCKSSPK----SNCAESFVFSSA-----------VVKGAHLLSQSK 211
SGS D S I+D R K S S FS A V++ + +Q
Sbjct: 164 ASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQED 223
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ + +ITS KD + + S NS K WD R + + E
Sbjct: 224 PLYTLASHQDTITSTSVSKDGAYLLSNSMDNSC-KIWDIRPYAPPNRNIKTFNGAQNNFE 282
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLY--NVLQLDKGPIQHFSGCRIESFYVKSEIC 329
L SS S D + +S D ++Y++ N QL H +F+
Sbjct: 283 KNLIK-SSWSIDGRRIGCGSS--DRQVYIWDTNTKQLQYCLPGHSGTVNEVTFH------ 333
Query: 330 PNASHILSGSSDGNAYVWQVNKP 352
PN I S SSD Y+ ++ KP
Sbjct: 334 PNEPIIASCSSDKTIYLGEI-KP 355
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 140 (54.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 39/131 (29%), Positives = 66/131 (50%)
Query: 53 PLAVSFCKTSKNSHIFAVS-DEDGYVSLFDSRRK-LPSFACHRENAEKAR-ISDWVAHQN 109
P S TS N + +V DG + S K + ++ + N A + ++ H+N
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN 72
Query: 110 AIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSG 169
I D+ + + I++AS D+T+K+WD E L+GHT + +P S+++VSG
Sbjct: 73 GISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNMIVSG 131
Query: 170 SRDGSFAIWDL 180
S D + IWD+
Sbjct: 132 SFDETVRIWDV 142
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 64/308 (20%), Positives = 130/308 (42%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEK-----KKCTGALMGHTGSIKSLCSHP 160
+H A+ + + + + +AS D+TI+ + + GH I + +
Sbjct: 22 SHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV-AFS 80
Query: 161 TNSDILVSGSRDGSFAIWDLRCKSSPKSNCAES-FVF-------SSAVVKGAHL------ 206
+++ +VS S D + +WD+ S K+ + + F S+ +V G+
Sbjct: 81 SDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 207 -LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAE 265
++ K + A S +T+V + +D S+ +S+ + + + WD+ H
Sbjct: 141 DVTTGKCLKVLPAHSDPVTAVDFNRDG-SLIVSSSYDGLCRIWDSGT---------GHCV 190
Query: 266 SSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVK 325
+ + +S + NG F+ +D+ + L+N+ ++ ++G + +
Sbjct: 191 KTLIDDEN-PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF--LKTYTGHVNAQYCIS 247
Query: 326 SEIC-PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
S N I+SGS D ++W++N + KL+ H V V P E I + S
Sbjct: 248 SAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ-KLEGHTETVMNVACHPTE-NLIASGSL 305
Query: 385 DYTVRLWS 392
D TVR+W+
Sbjct: 306 DKTVRIWT 313
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 49 EETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFD--SRRKLPSFACHRENAEKARISDWVA 106
+E PP VSF + S N V D + L++ S + L ++ H NA+ IS
Sbjct: 196 DENPP--VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH-VNAQYC-IS---- 247
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
+ F + I++ S D + +W+ KK L GHT ++ ++ HPT + ++
Sbjct: 248 ---SAFS---VTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN-LI 300
Query: 167 VSGSRDGSFAIW 178
SGS D + IW
Sbjct: 301 ASGSLDKTVRIW 312
Score = 108 (43.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
I + H N F + + + I++ S D+T++IWD KC L H+ + ++ +
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNR 165
Query: 161 TNSDILVSGSRDGSFAIWD 179
S ++VS S DG IWD
Sbjct: 166 DGS-LIVSSSYDGLCRIWD 183
Score = 79 (32.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEA-----GK-IVTSS 383
PN IL G+ D +W ++ + LK++ G V A +C + A GK IV+ S
Sbjct: 208 PNGKFILVGTLDNTLRLWNISSAKF----LKTYTGHVNA-QYCISSAFSVTNGKRIVSGS 262
Query: 384 DDYTVRLWSLEN 395
+D V +W L +
Sbjct: 263 EDNCVHMWELNS 274
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 277 ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC-PNASHI 335
ISS +NG + + D+ ++++ + K +Q G E+ V + C P + I
Sbjct: 246 ISSAFSVTNGKRIVSGSEDNCVHMWELNS--KKLLQKLEG-HTET--VMNVACHPTENLI 300
Query: 336 LSGSSDGNAYVWQVNK 351
SGS D +W K
Sbjct: 301 ASGSLDKTVRIWTQKK 316
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 180 (68.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 69/282 (24%), Positives = 131/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 369
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 370 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 427 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 482
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 483 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 535
Query: 355 -DPIKLKS-HDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ S H VT + + N ++TSSDD TV+LW L+
Sbjct: 536 LQTLQGPSKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 574
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 409
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 470 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 523
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 524 -TVKIWD--IKTGQCLQTLQGPSKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 572
Query: 349 V 349
+
Sbjct: 573 L 573
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 52/230 (22%), Positives = 95/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 369 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 427 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 483
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 484 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 541
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 542 PSKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 588
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 139 (54.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
+ N +++ AH+ ++ DL + + D + S D T+K+WD + + +L GH
Sbjct: 35 QSNMNNVKVNK-TAHRESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEERSLTGHGWD 93
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
+KS+ HPT S +LVSG +D +WD +
Sbjct: 94 VKSVDWHPTKS-LLVSGGKDYLVKLWDAK 121
Score = 89 (36.4 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 35/146 (23%), Positives = 67/146 (45%)
Query: 254 KAQITQAWPHAESSSAKETR-LHGISSLSQ----DSNGVFLTASCMDHRIYLYNVLQLDK 308
K + + W ++ S +E R HG ++ Q + NG ++ + D I LY++ + +
Sbjct: 111 KDYLVKLW---DAKSGRELRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKE 167
Query: 309 GPIQHFSGCRIESFYVKSEICP-NASHILSGSSDGNAYVWQVNKPQADPIKLKS-HDGEV 366
++ F G + + P + + +SGS DG + W V + I++ + HD V
Sbjct: 168 --LESFRGHNKDVTALAWH--PFHEEYFVSGSYDGAIFHWLVGH-ETPQIEINNAHDNSV 222
Query: 367 TAVNWCPNEAGKIVTSS-DDYTVRLW 391
+ W P G ++ S +D+ R W
Sbjct: 223 WDLAWHP--VGYLLCSGGNDHATRFW 246
Score = 37 (18.1 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 445 LNQINSSDPKNMP 457
+NQ + P NMP
Sbjct: 436 MNQTHQGPPSNMP 448
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 180 (68.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 69/282 (24%), Positives = 131/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 369
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 370 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 427 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 482
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 483 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 535
Query: 355 -DPIKLKS-HDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ S H VT + + N ++TSSDD TV+LW L+
Sbjct: 536 LQTLQGPSKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 574
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 353 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 409
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 470 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 523
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 524 -TVKIWD--IKTGQCLQTLQGPSKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 572
Query: 349 V 349
+
Sbjct: 573 L 573
Score = 123 (48.4 bits), Expect = 0.00030, P = 0.00030
Identities = 52/230 (22%), Positives = 95/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 369 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 427 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 483
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 484 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 541
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 542 PSKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 588
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 129 (50.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
R ++ + + + H ++ L +D + T S D+T K+WD + KKC L GH
Sbjct: 218 RWKGDRFKEAHLIGHTGTVWALHL--DDERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYP 275
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDL 180
I+ L N++I+ +GS D S IWDL
Sbjct: 276 IQCL---DVNNNIMATGSLDNSIRIWDL 300
Score = 97 (39.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++GS D VW + ++ L+ H+G V + W + ++T S+D +VR
Sbjct: 468 NGNVLVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRCLQW---DGTTLITGSNDQSVRW 524
Query: 391 WSL 393
W+L
Sbjct: 525 WNL 527
Score = 95 (38.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 32/112 (28%), Positives = 48/112 (42%)
Query: 70 VSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASG 128
+ DE Y FD K+ +K R + H I C + + NI+ T S
Sbjct: 241 LDDERVYTGSFDKTAKVWD-----TKTKKCRFT-LAGHYYPI--QC-LDVNNNIMATGSL 291
Query: 129 DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
D +I+IWD EK K G L + C D ++SGS D + +W++
Sbjct: 292 DNSIRIWDLEKGKSKGILTTRAHNFDVFCLQQIG-DQIISGSSDSTVKVWNI 342
Score = 37 (18.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNW 371
+++GS+D + W +N +L S + ++ + +
Sbjct: 513 LITGSNDQSVRWWNLNYDSDQSKELFSFNSSISCLQF 549
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 183 (69.5 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 70/279 (25%), Positives = 128/279 (45%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S + +I++SGS D + +WD+
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV---WSSQMSGNIIISGSTDRTLKVWDM-- 1062
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
C + ++ V+ HL SK VS + A++ + + V + +AV
Sbjct: 1063 ---DSGACVHTLQGHTSTVRCMHLHG-SKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAV 1118
Query: 242 NSIVKFWDTRNLKA----QITQAWPHAESSSAKETRLHGISS--LSQDSNGVFLTASCMD 295
+ +D + + + + + W H E T L G ++ S +G+ + + +D
Sbjct: 1119 RCVQ--YDGKLIVSGAYDYMVKIW-HPERQECLHT-LQGHTNRVYSLQFDGLHVVSGSLD 1174
Query: 296 HRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQAD 355
I +++V + G +H + +S E+ N ++SG++D VW + Q
Sbjct: 1175 TSIRVWDV---ETGNCKH-TLMGHQSLTSGMELRQNI--LVSGNADSTVKVWDITTGQCL 1228
Query: 356 PIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
L + +AV + +VTSSDD TV+LW ++
Sbjct: 1229 QT-LSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVK 1266
>ASPGD|ASPL0000003994 [details] [associations]
symbol:AN6160 species:162425 "Emericella nidulans"
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IEA]
[GO:0031124 "mRNA 3'-end processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0007059 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0006397 EMBL:BN001301 EMBL:AACD01000105 KO:K15542
RefSeq:XP_663764.1 ProteinModelPortal:Q5AZX0 STRING:Q5AZX0
EnsemblFungi:CADANIAT00006850 GeneID:2870757 KEGG:ani:AN6160.2
HOGENOM:HOG000213918 OMA:RDICILR OrthoDB:EOG4QVGMD Uniprot:Q5AZX0
Length = 567
Score = 168 (64.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 34/76 (44%), Positives = 43/76 (56%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH +A+ DL W DT L+AS D T+KI+D + C L GH +KS HPT +
Sbjct: 153 AHHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTKG-L 211
Query: 166 LVSGSRDGSFAIWDLR 181
LVSGS+D WD R
Sbjct: 212 LVSGSKDHQVKFWDPR 227
Score = 55 (24.4 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
N + + + S D A V+ + + D L+ H+ ++ + W P I T S+D
Sbjct: 251 NNNLLATSSRDQTARVFDL-RMMRDICILRGHEKPISTLTWHPVHCSLISTGSED 304
Score = 48 (22.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 25/109 (22%), Positives = 47/109 (43%)
Query: 245 VKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL-YNV 303
VKFWD R + T H+ ++ T+ +++ ++ TA D R+ +
Sbjct: 221 VKFWDPRTARCLTTL---HSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMRDICI 277
Query: 304 LQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKP 352
L+ + PI + + C S I +GS DG+ Y + +++P
Sbjct: 278 LRGHEKPISTLTWHPVH--------C---SLISTGSEDGSLYHYLLDEP 315
>ZFIN|ZDB-GENE-060803-1 [details] [associations]
symbol:ahi1 "Abelson helper integration site 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007368 "determination of left/right symmetry" evidence=IMP]
[GO:0044458 "motile cilium assembly" evidence=IMP] Pfam:PF00018
InterPro:IPR017986 InterPro:IPR001452 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00326
ZFIN:ZDB-GENE-060803-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF50044 GO:GO:0007368
GO:GO:0044458 GeneTree:ENSGT00530000063479 EMBL:CR407704
EMBL:BX248131 IPI:IPI01024108 Ensembl:ENSDART00000148403
ArrayExpress:F8W3V6 Bgee:F8W3V6 Uniprot:F8W3V6
Length = 1193
Score = 139 (54.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG-ALMGHTGSIKSLCSH 159
+S + H + ++DLCW ++D +LTAS D T+++W+ E+ + + H + H
Sbjct: 584 LSSFNGHLSVVYDLCWSRDDKGLLTASSDGTVRVWNVERLQTLAHKTLPHPSFVYCAKFH 643
Query: 160 PTNSDILVSGSRDGSFAIWDL 180
P ++ +G DG +W++
Sbjct: 644 PQAQSLVATGGYDGVLRVWNV 664
Score = 94 (38.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 42/146 (28%), Positives = 61/146 (41%)
Query: 239 SAVNS-IVKFWDTRNLKAQ---ITQAWPHAESSSAKETRLHGIS--SLSQDSNGVFLTAS 292
SA NS ++ W T+ + T W + KE L+GIS SL NG L
Sbjct: 698 SADNSGLIIVWGTKVMPGSRRGATSQW--SIEREIKEADLNGISINSLEVHPNGRRLLIH 755
Query: 293 CMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKP 352
D + V+ L ++ + G + S P S I +GS DG AYVW N
Sbjct: 756 AKDS---VLRVMDLRILAVKKYIGATNYRDRINSTFTPCGSFIFAGSEDGLAYVW--NSE 810
Query: 353 QADPIKLKS---HDGEVTAVNWCPNE 375
D + + S + + AV + P+E
Sbjct: 811 TGDQVAVYSELCYSSALRAVAFHPHE 836
Score = 41 (19.5 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 251 RNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ L + + + PH SS+ G+SSL + G+
Sbjct: 916 QKLDSVLVKMEPHRSSSNVDMYEQGGMSSLGRSIEGL 952
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 114 (45.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 64 NSHIFAVS-DEDGYVSLFDSRRKLPS-----FACHRENAEKARISDWVAHQNAIFDLCWI 117
NS ++A S E G V+++D + L + A E +E + + HQ F + W
Sbjct: 173 NS-VYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWS 231
Query: 118 KEDTNILTASGD--QTIKIW----DAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
+L A+GD + I +W D K L GH+ S++ L P +L S S
Sbjct: 232 PSADGVL-ATGDCRRDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSV 290
Query: 172 DGSFAIWDLRCKSSPKSNC 190
D + IWD C++SP+ C
Sbjct: 291 DKTIRIWD--CRASPQKAC 307
Score = 110 (43.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQAD-PIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
N I SG DG ++W + + Q+ PI K H +T V W P EA + + DD +
Sbjct: 327 NEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQI 386
Query: 389 RLWSL 393
LW L
Sbjct: 387 ALWDL 391
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 123 (48.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 46/166 (27%), Positives = 75/166 (45%)
Query: 235 IATASAVNSIVKFWDTRN--LKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTAS 292
+A A ++ VK WDT + L + ++ P A S K + + S++ NG L
Sbjct: 117 LAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACG 176
Query: 293 CMDHRIYLYNVLQLDKGPIQH-FSGCRIE-SFYVKSEICPNASHILSGSSDGNAYVWQVN 350
MD I +++V D+ + H G + V S + P + SGS DG+ ++
Sbjct: 177 SMDGTICVFDV---DRSKLLHQLEGHNMPVRSLVFSPVDPRV--LFSGSDDGHV---NMH 228
Query: 351 KPQADPI--KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+ + + H V +V+ P + G I T S D TVRLW L+
Sbjct: 229 DAEGKTLLGSMSGHTSWVLSVDASP-DGGAIATGSSDRTVRLWDLK 273
Score = 119 (46.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 38/138 (27%), Positives = 60/138 (43%)
Query: 50 ETPPLAVSFCKTSKNSHIFAVSD-EDGYVSLFD--SRRKLPSFACHRENAEKARISDWVA 106
E PP V + I AV+ V L+D S R + + + R +A K SD +
Sbjct: 99 EAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP--SDKTS 156
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
+ + + W + S D TI ++D ++ K L GH ++SL P + +L
Sbjct: 157 SKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVL 216
Query: 167 VSGSRDGSFAIWDLRCKS 184
SGS DG + D K+
Sbjct: 217 FSGSDDGHVNMHDAEGKT 234
Score = 95 (38.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 106 AHQNAIFDLCWIK--EDTN--ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPT 161
AH+++++ W+ ED +LT S D+T+K+W ++ GH+ + +L +HP+
Sbjct: 12 AHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPS 71
Query: 162 NSDILVSGSRDGSFAIWDL 180
I S S D ++D+
Sbjct: 72 GI-IAASSSIDSFVRVFDV 89
Score = 73 (30.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/76 (27%), Positives = 40/76 (52%)
Query: 321 SFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPN-----E 375
S+ + + P+ I +GSSD +W + K +A + +H+ +V +V + P
Sbjct: 244 SWVLSVDASPDGGAIATGSSDRTVRLWDL-KMRAAIQTMSNHNDQVWSVAFRPPGGTGVR 302
Query: 376 AGKIVTSSDDYTVRLW 391
AG++ + SDD +V L+
Sbjct: 303 AGRLASVSDDKSVSLY 318
Score = 53 (23.7 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 12/61 (19%), Positives = 25/61 (40%)
Query: 121 TNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+ I+ AS D ++++D + L + + P + + V+G S +W
Sbjct: 71 SGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLW 130
Query: 179 D 179
D
Sbjct: 131 D 131
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 178 (67.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 68/282 (24%), Positives = 130/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 274 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 327
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 328 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 384
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 385 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 440
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 441 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 493
Query: 355 -DPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ H VT + + N ++TSSDD TV+LW L+
Sbjct: 494 LQTLQGPNKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 532
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 311 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 367
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 368 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 428 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 481
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 482 -TVKIWD--IKTGQCLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 530
Query: 349 V 349
+
Sbjct: 531 L 531
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 327 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 384
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 385 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 441
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 442 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 499
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P+ S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 500 PNKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 546
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 72/305 (23%), Positives = 128/305 (41%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNS 163
W H + I+ + + + T GD+ +K+WD + L+G + SI S+ P +
Sbjct: 320 WTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDE 379
Query: 164 DILVSGSRDGSFAIWDL---RCKSSPKSNCAE----SFVFSSAVVKGAH-----LLSQSK 211
IL + S D S +W+ R + + + + F+ S+ VV G+H L K
Sbjct: 380 SILGT-SNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNRVVTGSHDRTIKLWDLQK 438
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASA-VNSIVKFWDTRNLKAQITQAWPHAESSSAK 270
R S + L + AS V+ V+FWD+ + TQ SS
Sbjct: 439 GYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSN--AGEPTQVL-----SSIH 491
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESF--YVKSEI 328
E ++ I++ ++N + LT S DH + + ++ D I+ F + + K+
Sbjct: 492 EGQITSITNSPTNTNQI-LTNS-RDHTLKIIDIRTFDT--IRTFKDPEYRNGLNWTKASW 547
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDG--EVTAVNWCPNEAGKIVTSSDDY 386
P+ +I SGS DG+ +W + + K H+ V +W P A +++ D
Sbjct: 548 SPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPL-ANIFISADKDK 606
Query: 387 TVRLW 391
+ W
Sbjct: 607 NIIQW 611
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 178 (67.7 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 68/282 (24%), Positives = 130/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 314 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 367
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 368 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 424
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 425 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 480
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 481 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 533
Query: 355 -DPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ H VT + + N ++TSSDD TV+LW L+
Sbjct: 534 LQTLQGPNKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 572
Score = 135 (52.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 351 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 407
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 468 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 521
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 522 -TVKIWD--IKTGQCLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 570
Query: 349 V 349
+
Sbjct: 571 L 571
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 367 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 424
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 425 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 481
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 482 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 539
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P+ S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 540 PNKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 586
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/282 (24%), Positives = 130/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 447
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 448 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 504
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 505 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 560
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 561 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 613
Query: 355 -DPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ H VT + + N ++TSSDD TV+LW L+
Sbjct: 614 LQTLQGPNKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 652
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 431 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 487
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 548 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 601
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 602 -TVKIWD--IKTGQCLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 650
Query: 349 V 349
+
Sbjct: 651 L 651
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 447 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 504
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 505 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 561
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 562 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 619
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P+ S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 620 PNKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 666
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 178 (67.7 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 68/282 (24%), Positives = 130/282 (46%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 399 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 452
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 453 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 509
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 510 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 565
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 566 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 618
Query: 355 -DPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++ H VT + + N ++TSSDD TV+LW L+
Sbjct: 619 LQTLQGPNKHQSAVTCLQFNKNF---VITSSDDGTVKLWDLK 657
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 436 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 492
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 493 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 553 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 606
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 607 -TVKIWD--IKTGQCLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 655
Query: 349 V 349
+
Sbjct: 656 L 656
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 52/230 (22%), Positives = 96/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 452 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 509
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 510 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 566
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 567 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 624
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
P+ S+ + + ++ +G T D + ++ N++ L+ G
Sbjct: 625 PNKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLKTGEFIRNLVTLESG 671
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 96/391 (24%), Positives = 163/391 (41%)
Query: 22 KARKRPYFGDVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFD 81
+A K P + D I T +H E +P A+S T + S A D ++F
Sbjct: 226 EAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAISRAATKRLSQP-AGGLLDSITNIF- 283
Query: 82 SRRKLPSFACHRENAE-------KARISDWV-----AHQNAIFDLCWIKEDTNILTASG- 128
RR + SF ++N + + R+ AH + + + +L G
Sbjct: 284 GRRSVSSFPVPQDNVDTHPGSGKEVRVPATALCVFDAHDGEV-NAVQFSPGSRLLATGGM 342
Query: 129 DQTIKIWDAEKKKCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW---DLRCK 183
D+ +K+W+ +KC G+L G I S+ + L++ S D + IW D R +
Sbjct: 343 DRRVKLWEVFGEKCEFKGSLSGSNAGITSI-EFDSAGSYLLAASNDFASRIWTVDDYRLR 401
Query: 184 SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATA---SA 240
+ + S V+ LL ++ VS ++ + L+ +V I T S+
Sbjct: 402 HTLTGH-------SGKVLSAKFLLDNARIVSGSHDRTLKLWD---LRSKVCIKTVFAGSS 451
Query: 241 VNSIV---KFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDH 296
N IV + + + +I + W S +E L G I++L + L SC
Sbjct: 452 CNDIVCTEQCVMSGHFDKKI-RFWDIRSESIVREMELLGKITALDLNPERTELL-SCS-- 507
Query: 297 RIYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQ 353
R L V+ L I Q FS G + S + + P+ S++ +GS++G+ Y+W V +
Sbjct: 508 RDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGK 567
Query: 354 ADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+ + K H + AV W P+ G V S D
Sbjct: 568 VEKVLSKQHSSSINAVAWSPS--GSHVVSVD 596
Score = 119 (46.9 bits), Expect = 0.00077, P = 0.00077
Identities = 65/263 (24%), Positives = 108/263 (41%)
Query: 97 EKARISDWVAHQNA-IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKS 155
EK ++ NA I + + + +L AS D +IW + + L GH+G + S
Sbjct: 354 EKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLS 413
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKS-------N---CAESFVFSSAVVKGAH 205
N+ I VSGS D + +WDLR K K+ N C E V S K
Sbjct: 414 AKFLLDNARI-VSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIR 472
Query: 206 LLS-QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA 264
+S+ + R IT+ L L E + + + + ++K D R + T + P
Sbjct: 473 FWDIRSESIVREMELLGKITA-LDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGF 531
Query: 265 ESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYV 324
+ S TR+ S D G ++ A + +Y+++VL G ++ + S
Sbjct: 532 KCGS-DWTRV----VFSPD--GSYVAAGSAEGSLYIWSVLT---GKVEKVLSKQHSSSIN 581
Query: 325 KSEICPNASHILSGSSDGNAYVW 347
P+ SH++S A +W
Sbjct: 582 AVAWSPSGSHVVSVDKGCKAVLW 604
>ASPGD|ASPL0000003533 [details] [associations]
symbol:AN6867 species:162425 "Emericella nidulans"
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0000266 "mitochondrial fission" evidence=IEA] [GO:0016559
"peroxisome fission" evidence=IEA] [GO:0005741 "mitochondrial outer
membrane" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 EMBL:AACD01000113 HOGENOM:HOG000048466
OrthoDB:EOG469V30 RefSeq:XP_664471.1 HSSP:P46680
ProteinModelPortal:Q5AXW3 STRING:Q5AXW3
EnsemblFungi:CADANIAT00007667 GeneID:2870567 KEGG:ani:AN6867.2
OMA:CVQTLDV Uniprot:Q5AXW3
Length = 654
Score = 155 (59.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 63/265 (23%), Positives = 112/265 (42%)
Query: 37 TEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENA 96
T G+ T E E P + SF S + + + S+ +R +P H A
Sbjct: 259 TTAGSETHEEPASEDPAMDASFMSESIYQKLPSPRSLK-HRSI--RKRSMP--VLHEHFA 313
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSL 156
+ I ++ AH + + L ++TA+ D T+++WD +CTG L GH S++ L
Sbjct: 314 PGSEIKEFQAHTDVVTALDLDYPFGTMITAALDDTVRVWDLNIGRCTGFLEGHNASVRCL 373
Query: 157 CSHPTNSDILVSGSRDGSFAIWDL-RCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSR 215
+++ +GS D + +WDL R +++ + N AV + V
Sbjct: 374 ---QIEDNVVATGSMDATVKLWDLSRARTTHRDNRVNKDEDDDAVSVAYSTSLEDCHVYS 430
Query: 216 RKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQA----WPHAESSSAKE 271
A +T+ L+ K ++ + SA + ++ WD +K + Q W A++SS
Sbjct: 431 LDAHVGEVTA-LHFKGN-TLVSGSA-DKTLRHWDL--VKGRCVQTLDVLWAAAQASSLGN 485
Query: 272 TRLHGISSLSQDSNGVFLTA-SCMD 295
S D++ F+ A C D
Sbjct: 486 ESQWRPSGRLPDASADFVGAVQCFD 510
Score = 68 (29.0 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 323 YVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
+V + C +A+ + G++DG +W + Q L H G V+ + + + +VT
Sbjct: 502 FVGAVQCFDAA-LACGTADGMVRLWDLRSGQVHR-SLVGHTGPVSCLQF---DDVHLVTG 556
Query: 383 SDDYTVRLWSL 393
S D ++R+W L
Sbjct: 557 SLDRSIRIWDL 567
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 176 (67.0 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 68/281 (24%), Positives = 129/281 (45%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 447 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 500
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKD-EVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 501 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 557
Query: 242 NSIVKFWDTRNLKAQ----ITQAW-PHAESS-SAKETRLHGISSLSQDSNGVFLTASCMD 295
+ +D R + + + + W P E+ + + + SL D G+ + + +D
Sbjct: 558 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLD 613
Query: 296 HRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 614 TSIRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQC 666
Query: 355 -DPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++ H VT + + N ++TSSDD TV+LW L
Sbjct: 667 LQTLQGPHKHQSAVTCLQFNKNF---VITSSDDGTVKLWDL 704
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 54/230 (23%), Positives = 96/230 (41%)
Query: 95 NAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NAE I H + + C + +++ S D T+++WD E +C LMGH ++
Sbjct: 500 NAETGECIHTLYGHTSTV--RCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 557
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV 213
+ C + VSG+ D +WD ++ + + S G H++S S
Sbjct: 558 R--CVQYDGRRV-VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDT 614
Query: 214 SRRK------------AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAW 261
S R S+TS + LKD + + + +A +S VK WD + + T
Sbjct: 615 SIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-LVSGNA-DSTVKIWDIKTGQCLQTLQG 672
Query: 262 PHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRI--YLYNVLQLDKG 309
PH S+ + + ++ +G T D R ++ N++ L+ G
Sbjct: 673 PHKHQSAVTCLQFNKNFVITSSDDG---TVKLWDLRTGEFIRNLVTLESG 719
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/241 (25%), Positives = 103/241 (42%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D I++ S D+T+K+W+AE +C L GHT +++ C H + +VSGSRD + +WD
Sbjct: 484 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH-LHEKRVVSGSRDATLRVWD 540
Query: 180 L---RCKSSPKSNCA--ESFVFSSA-VVKGAHLLSQSKRVSRRKAASMSI---TSVLY-L 229
+ +C + A + VV GA+ + ++ T+ +Y L
Sbjct: 541 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 230 K-DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
+ D + + + S SI + WD I H +S E + + + S + DS
Sbjct: 601 QFDGIHVVSGSLDTSI-RVWDVETGNC-IHTLTGHQSLTSGMELKDNILVSGNADS---- 654
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
T D I LQ +GP +H S F N + +++ S DG +W
Sbjct: 655 -TVKIWD--IKTGQCLQTLQGPHKHQSAVTCLQF--------NKNFVITSSDDGTVKLWD 703
Query: 349 V 349
+
Sbjct: 704 L 704
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 171 (65.3 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 77/302 (25%), Positives = 123/302 (40%)
Query: 107 HQNAIFDLCWIKE-DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+N ++ + + I T S D+T K+W AE KC GHT I L +P S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP-QSTV 191
Query: 166 LVSGSRDGSFAIWDLRCKSSPKS---NCAE--SFVFSSA---VVKGA--HLL-----SQS 210
+ +GS D + +WD++ + + AE S F ++ ++ G+ H + S
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 211 KRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAK 270
++V I+S L+ D I T S ++ WD + K T H +
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGS-MDKTCMLWDATSGKCVATLTG-HDDE---- 305
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP 330
I D G + + D +YN + I G E K P
Sbjct: 306 ------ILDSCFDYTGKLIATASADGTARVYNATT--RKCITKLEGH--EGEISKISFNP 355
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIV-TSSDDYTVR 389
+ +L+GSSD A +W V Q + L+ H E+ + + N G IV T S D + R
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQV-LEGHTDEIFSCAF--NYKGNIVITGSKDNSCR 412
Query: 390 LW 391
+W
Sbjct: 413 IW 414
Score = 141 (54.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 74/304 (24%), Positives = 134/304 (44%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + ++ K + +T S D+T K+WD + L GH + ++ + D
Sbjct: 90 AHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS D + +W S+ C +F +A + QS V+ SM T+
Sbjct: 150 IATGSFDKTCKLW-----SAETGKCYHTFRGHTAEIVCLSFNPQSTVVA---TGSMDTTA 201
Query: 226 VLY-LK--DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA----ESSSAKETR-LHG- 276
L+ ++ +EV T I +DT + IT ++ H ++S+ ++ L G
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGH 260
Query: 277 ---ISS--LSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
ISS S D + + LT S MD L++ G + +G E + S
Sbjct: 261 CAEISSALFSWDCS-LILTGS-MDKTCMLWDATS---GKCVATLTGHDDE--ILDSCFDY 313
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
I + S+DG A V+ + KL+ H+GE++ +++ P + +++T S D T R+
Sbjct: 314 TGKLIATASADGTARVYNATTRKCIT-KLEGHEGEISKISFNP-QGNRLLTGSSDKTARI 371
Query: 391 WSLE 394
W ++
Sbjct: 372 WDVQ 375
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 37/120 (30%), Positives = 60/120 (50%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
++ H + I D C+ I TAS D T ++++A +KC L GH G I + +P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 161 TNSDILVSGSRDGSFAIWDLR---CKSSPKSNCAESFVFSSAV-VKGAHLLSQSKRVSRR 216
+ +L +GS D + IWD++ C + + E +FS A KG +++ SK S R
Sbjct: 356 QGNRLL-TGSSDKTARIWDVQTGQCLQVLEGHTDE--IFSCAFNYKGNIVITGSKDNSCR 412
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 169 (64.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 77/299 (25%), Positives = 129/299 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 65 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 121
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 237
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 238 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I +GS+D YVW + KL H G + V + P+E I SSD
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 62/262 (23%), Positives = 118/262 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 108 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 167
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 168 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 227
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 228 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF-QGNVHNFE 285
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + A D +Y+++ L K P H +F+
Sbjct: 286 KNLLR--CSWSPD--GSKIAAGSADRFVYVWDTTSRRILYKLP-GHAGSINEVAFH---- 336
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
P+ I+S SSD Y+ ++
Sbjct: 337 --PDEPIIISASSDKRLYMGEI 356
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 154 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 197
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 198 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 256
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 257 NTVRVWDVR-PFAPKERCVKIF 277
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 173 (66.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 94/388 (24%), Positives = 161/388 (41%)
Query: 35 DFTEIGAVTVEHHGEETPPL-AVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHR 93
D E+ H EET P+ A+S T + S A D ++F RR + SF +
Sbjct: 238 DDIEVIVDETSDHAEETSPVRAISRAATKRLSQP-AGGLLDSITNIF-GRRSVSSFPVPQ 295
Query: 94 ENAE-------KARISDWV-----AHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKK 140
+N + + R+ AH + + + +L G D+ +K+W+
Sbjct: 296 DNVDTHPGSSKEVRVPTTAMCIFDAHDGEV-NAVQFSPGSRLLATGGMDRRVKLWEVFGD 354
Query: 141 KCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW---DLRCKSSPKSNCAESFV 195
KC G+L G I S+ + L++ S D + IW D R + + +
Sbjct: 355 KCEFKGSLSGSNAGITSI-EFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGH------ 407
Query: 196 FSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATA---SAVNSIV---KFWD 249
S V+ LL ++ VS ++ + L+ +V I T S+ N IV +
Sbjct: 408 -SGKVLSAKFLLDNARIVSGSHDRTLKLWD---LRSKVCIKTVFAGSSCNDIVCTEQCVM 463
Query: 250 TRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK 308
+ + +I + W S +E L G I++L + L SC R L ++ L
Sbjct: 464 SGHFDKKI-RFWDIRSESIVREMELLGKITALDLNPERTELL-SCS--RDDLLKIIDLRI 519
Query: 309 GPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGE 365
+ Q FS G + S + + P+ ++ +GS++G+ Y+W V + + + K H
Sbjct: 520 NAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSS 579
Query: 366 VTAVNWCPNEAGKIVTSSDDYTVR-LWS 392
+ AV W P+ G V S D + LWS
Sbjct: 580 INAVAWSPS--GSHVVSVDKGSKAVLWS 605
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 173 (66.0 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 100/400 (25%), Positives = 167/400 (41%)
Query: 22 KARKRPYFGDVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFD 81
+A K P + D I T +H E +P AVS T + S A D ++F
Sbjct: 226 EAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRAVSRAATKRLSQP-AGGLLDSITNIF- 283
Query: 82 SRRKLPSFAC-------HRENAEKARI---SDWV--AHQNAIFDLCWIKEDTNILTASG- 128
RR + S H + + R+ + +V AH + + + +L G
Sbjct: 284 GRRSVSSIPVPQDIMDTHPASGKDVRVPTTASYVFDAHDGEV-NAVQFSPGSRLLATGGM 342
Query: 129 DQTIKIWDAEKKKCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW---DLRCK 183
D+ +K+W+A KC G+L G I S+ + L++ S D + IW D R +
Sbjct: 343 DRRVKLWEAFGDKCEFKGSLSGSNAGITSI-EFDSAGAYLLAASNDFASRIWTVDDYRLR 401
Query: 184 SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATA---SA 240
+ + S V+ LL ++ VS ++ + L+ +V I T S+
Sbjct: 402 HTLTGH-------SGKVLSAKFLLDNARIVSGSHDRTLKLWD---LRSKVCIKTVFAGSS 451
Query: 241 VNSIV---KFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDH 296
N IV + + + +I + W S +E L G I++L + L SC
Sbjct: 452 CNDIVCTEQCVMSGHFDKKI-RFWDIRSESVVREMELLGKITALDLNPERTELL-SCS-- 507
Query: 297 RIYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQ 353
R L V+ L + Q FS G + S + + P+ S++ +GS++G+ YVW V +
Sbjct: 508 RDDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGK 567
Query: 354 ADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYT-VRLWS 392
+ + K H + AV W P+ G V S D + LW+
Sbjct: 568 VEKVLSKQHSSSINAVAWAPS--GLHVVSVDKGSRAVLWA 605
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 76/299 (25%), Positives = 129/299 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 66 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 122
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 183 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 238
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 239 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I +GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRV-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 147 (56.8 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 169 CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 229 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF-QGNVHNFE 286
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + A D +Y+++ L K P H +F+
Sbjct: 287 KNLLR--CSWSPD--GSKIAAGSADRFVYVWDTTSRRVLYKLP-GHAGSINEVAFH---- 337
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
P+ ILS SSD Y+ ++
Sbjct: 338 --PDEPIILSASSDKRLYMGEI 357
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 39/142 (27%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A + + QN L
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAVQTF---QNTYQVL 198
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 257
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 258 NTVRVWDVR-PFAPKERCVKIF 278
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 76/315 (24%), Positives = 127/315 (40%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKE-DTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
+ A ++ H+N ++ + + I T S D+T K+W E KC GHT
Sbjct: 120 DTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAE 179
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSP---KSNCAE--SFVFSSA---VVKGA 204
I L +P S ++ +GS D + +WD++ + + AE S F+++ ++ G+
Sbjct: 180 IVCLSFNP-QSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 205 --HLL-----SQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQI 257
H + ++V+ I+S + D I T S ++ K WD N K
Sbjct: 239 FDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGS-MDKTCKLWDATNGKCVA 297
Query: 258 TQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC 317
T H + I D G + + D +++ + I G
Sbjct: 298 TLTG-HDDE----------ILDSCFDYTGKLIATASADGTARIFSAAT--RKCIAKLEGH 344
Query: 318 RIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAG 377
E K P +H+L+GSSD A +W Q + L+ H E+ + + N G
Sbjct: 345 --EGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQV-LEGHTDEIFSCAF--NYKG 399
Query: 378 KIV-TSSDDYTVRLW 391
IV T S D T R+W
Sbjct: 400 NIVITGSKDNTCRIW 414
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 73/306 (23%), Positives = 131/306 (42%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + ++ K + +T S D+T K+WD + L GH + ++ + D
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDK 149
Query: 166 LVSGSRDGSFAIWDL---RCKSSPKSNCAE----SF-VFSSAVVKG-----AHL--LSQS 210
+ +GS D + +W + +C + + + AE SF S+ V G A L +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 209
Query: 211 KRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPH-AESSSA 269
+ V + S I S+ + I T S +++V WD + ++ H AE SSA
Sbjct: 210 EEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV-VWDA-DTGRKVNILIGHCAEISSA 267
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI 328
S + D + + LT S MD L++ G + +G E + S
Sbjct: 268 ---------SFNWDCS-LILTGS-MDKTCKLWDATN---GKCVATLTGHDDE--ILDSCF 311
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
I + S+DG A ++ + KL+ H+GE++ +++ P + ++T S D T
Sbjct: 312 DYTGKLIATASADGTARIFSAATRKCIA-KLEGHEGEISKISFNP-QGNHLLTGSSDKTA 369
Query: 389 RLWSLE 394
R+W +
Sbjct: 370 RIWDAQ 375
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 76/299 (25%), Positives = 129/299 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 66 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 122
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 238
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 239 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I +GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 229 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF-QGNVHNFE 286
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + A D +Y+++ L K P H +F+
Sbjct: 287 KNLLR--CSWSPD--GSKIAAGSADRFVYVWDTTSRRILYKLP-GHAGSINEVAFH---- 337
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
P+ ILS SSD Y+ ++
Sbjct: 338 --PDEPIILSASSDKRLYMGEI 357
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 198
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 257
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 258 NTVRVWDVR-PFAPKERCVKIF 278
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 76/299 (25%), Positives = 129/299 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 66 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 122
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 238
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 239 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 291
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I +GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 229 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF-QGNVHNFE 286
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + A D +Y+++ L K P H +F+
Sbjct: 287 KNLLR--CSWSPD--GSKIAAGSADRFVYVWDTTSRRILYKLP-GHAGSINEVAFH---- 337
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
P+ ILS SSD Y+ ++
Sbjct: 338 --PDEPIILSASSDKRLYMGEI 357
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 198
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 257
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 258 NTVRVWDVR-PFAPKERCVKIF 278
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 76/299 (25%), Positives = 129/299 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 66 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 122
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 123 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 183 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 238
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 239 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLR 291
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I +GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 292 CSWSPDGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 229 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIF-QGNVHNFE 286
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + A D +Y+++ L K P H +F+
Sbjct: 287 KNLLR--CSWSPD--GSKIAAGSADRFVYVWDTTSRRILYKLP-GHAGSINEVAFH---- 337
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
P+ ILS SSD Y+ ++
Sbjct: 338 --PDEPIILSASSDKRLYMGEI 357
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 40/142 (28%), Positives = 60/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 198
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 257
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C F
Sbjct: 258 NTVRVWDVR-PFAPKERCVRIF 278
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 117 (46.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 40/150 (26%), Positives = 73/150 (48%)
Query: 245 VKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVL 304
+KFWD + ++ T HA ++ E +L+ NG +L + DH L+++
Sbjct: 271 IKFWDPKTGQSLATL---HAHKNTVMEVKLN--------LNGNWLLTASRDHLCKLFDIR 319
Query: 305 QLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVN-KPQADPIKLKSHD 363
L K +Q F G + E+ V + SG SDG+ W V + + +++ +H+
Sbjct: 320 NL-KEELQVFRGHKKEATAVAWHPV-HEGLFASGGSDGSLLFWHVGVEKEVGGMEM-AHE 376
Query: 364 GEVTAVNWCPNEAGKIVTS-SDDYTVRLWS 392
G + ++ W P G I+ S S+D+T + W+
Sbjct: 377 GMIWSLAWHP--LGHILCSGSNDHTSKFWT 404
Score = 111 (44.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 27/76 (35%), Positives = 38/76 (50%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH+ AI + + D T S D T++IWD + L GH +K + HPT +
Sbjct: 201 AHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKG-L 259
Query: 166 LVSGSRDGSFAI--WD 179
+VSGS+D I WD
Sbjct: 260 VVSGSKDSQQPIKFWD 275
>UNIPROTKB|A4RJV3 [details] [associations]
symbol:MDV1 "Mitochondrial division protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000002
"mitochondrial genome maintenance" evidence=ISS] [GO:0000266
"mitochondrial fission" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006402 "mRNA catabolic process"
evidence=ISS] [GO:0030014 "CCR4-NOT complex" evidence=ISS]
[GO:0030015 "CCR4-NOT core complex" evidence=ISS] [GO:0051020
"GTPase binding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006352
GO:GO:0000002 GO:GO:0006402 EMBL:CM001232 GO:GO:0030015
OrthoDB:EOG469V30 GO:GO:0000266 GO:GO:0006354 GO:GO:0051020
RefSeq:XP_003714706.1 ProteinModelPortal:A4RJV3 STRING:A4RJV3
GeneID:2679351 KEGG:mgr:MGG_01711 Uniprot:A4RJV3
Length = 661
Score = 142 (55.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/99 (34%), Positives = 55/99 (55%)
Query: 83 RRKLPSFACHRENAEKAR-ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK 141
RRK S A E+ E I + AHQ+ I + + +++A+ D ++K+WD +
Sbjct: 295 RRK--SMAVLHEHFEPGTSIRELRAHQDCITAMDFDAPFGTLVSAAMDDSVKVWDLNAGR 352
Query: 142 CTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
C G+L GHT S+++L +IL +GSRD + +WDL
Sbjct: 353 CIGSLEGHTASVRAL---QVEDNILATGSRDATVRLWDL 388
Score = 76 (31.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G++DG +W + Q L H G VTA+ + + +VT S D ++R+W L
Sbjct: 522 GTADGMVRLWDLRSGQVHR-NLVGHTGPVTALQF---DNMHLVTGSHDRSIRIWDL 573
Score = 75 (31.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 325 KSEICPNASHILSGSSDGNAYVWQ------VNKP---QAD-PI-KLKSHDGEVTAVNWCP 373
K+ P+ SH G D +A ++ V+ P AD P+ L SH EVTA+++
Sbjct: 390 KAHYDPHGSHYNGGDDDDDAMAFENPDDQPVDPPAGSMADCPLFTLSSHMDEVTALHF-- 447
Query: 374 NEAGKIVTSSDDYTVRLWSL 393
+ +V+ S D T+R W L
Sbjct: 448 -KGDTLVSGSSDKTIRQWDL 466
Score = 45 (20.9 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/58 (20%), Positives = 32/58 (55%)
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
H+++GS D + +W + ++D VT++ + +A +IV+++ + V+++
Sbjct: 558 HLVTGSHDRSIRIWDLRTGSI--FDAFAYDHPVTSMMF---DARRIVSAAGEDVVKVY 610
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 170 (64.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 80/321 (24%), Positives = 137/321 (42%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
R N + RI+ + ++ C +D I++ D TIKIWD + C+ L GHTGS
Sbjct: 207 RGNYKMTRINCQSENSKGVY--CLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGS 264
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL-LSQSK 211
+ LC N +++SGS D + +WD+ C ++ + V HL +
Sbjct: 265 V--LCLQYDNR-VIISGSSDATVRVWDVET-----GECIKTLIHHCEAV--LHLRFANGI 314
Query: 212 RVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQAWPHA 264
V+ K S+++ ++ +D V + +AVN +V F D + A + + W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVN-VVDFDDRYIVSASGDRTIKVWSMD 373
Query: 265 ESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC-RIES 321
+ H GI+ L G + + D+ I L+++ H C R+
Sbjct: 374 TLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDI---------HSGVCLRVLE 422
Query: 322 FYVKSEICP--NASHILSGSSDGNAYVWQVNKPQADPIKLKS---------HDGEVTAVN 370
+ + C + I+SG+ DG VW + + DP L S H G V +
Sbjct: 423 GHEELVRCIRFDEKRIVSGAYDGKIKVWDL-QAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 371 WCPNEAGKIVTSSDDYTVRLW 391
+ + +IV+SS D T+ +W
Sbjct: 482 F---DDFQIVSSSHDDTILIW 499
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 170 (64.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 80/321 (24%), Positives = 137/321 (42%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
R N + RI+ + ++ C +D I++ D TIKIWD + C+ L GHTGS
Sbjct: 207 RGNYKMTRINCQSENSKGVY--CLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGS 264
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL-LSQSK 211
+ LC N +++SGS D + +WD+ C ++ + V HL +
Sbjct: 265 V--LCLQYDNR-VIISGSSDATVRVWDVET-----GECIKTLIHHCEAV--LHLRFANGI 314
Query: 212 RVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQAWPHA 264
V+ K S+++ ++ +D V + +AVN +V F D + A + + W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVN-VVDFDDRYIVSASGDRTIKVWSMD 373
Query: 265 ESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC-RIES 321
+ H GI+ L G + + D+ I L+++ H C R+
Sbjct: 374 TLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDI---------HSGVCLRVLE 422
Query: 322 FYVKSEICP--NASHILSGSSDGNAYVWQVNKPQADPIKLKS---------HDGEVTAVN 370
+ + C + I+SG+ DG VW + + DP L S H G V +
Sbjct: 423 GHEELVRCIRFDEKRIVSGAYDGKIKVWDL-QAALDPRALSSEICLCSLVQHTGRVFRLQ 481
Query: 371 WCPNEAGKIVTSSDDYTVRLW 391
+ + +IV+SS D T+ +W
Sbjct: 482 F---DDFQIVSSSHDDTILIW 499
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 165 (63.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 69/289 (23%), Positives = 131/289 (45%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+ ++S D+ IKIW A K + GH I + + ++S +LVSGS D + +W+L
Sbjct: 87 LASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSRLLVSGSDDKTLKVWELST 145
Query: 183 KSSPKSNCAES-FVF-------SSAVVKGAHLLS-------QSKRVSRRKAASMSITSVL 227
S K+ S +VF S+ +V G+ S K + A S +++V
Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVH 205
Query: 228 YLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ +D S+ +S+ + + + WDT + Q + ++ +S + NG
Sbjct: 206 FNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--------VSFVKFSPNGK 254
Query: 288 FLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICPNASH-ILSGSSDGNAY 345
++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS D Y
Sbjct: 255 YILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVY 311
Query: 346 VWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
+W + + KL+ H V P E I+ S+ +D T++LW
Sbjct: 312 IWNLQSKEVVQ-KLQGHTDTVLCTACHPTE--NIIASAALENDKTIKLW 357
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ I D+ W + +++ S D+T+K+W+ K L GH+ + C+ S+++
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV-FCCNFNPQSNLI 171
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAES 193
VSGS D S IWD+R K+ A S
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHS 198
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 169 (64.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 98/392 (25%), Positives = 158/392 (40%)
Query: 35 DFTEIGAVTVEHHGEETPPL-AVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHR 93
D E+ A EET P+ AVS + + S A D ++F RR L SF +
Sbjct: 238 DDIEVLADETSDTAEETSPVRAVSRTPSKRLSQP-AGGLLDSITNIF-GRRSLSSFPPPQ 295
Query: 94 ENAE-------KARISDWV-----AHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKK 140
+NAE + R+ AH + + + +L G D+ +K+W+
Sbjct: 296 DNAEPHPGASKEVRVPTTAICVFDAHDGEV-NAVQFSPGSRLLATGGMDRRVKLWEVLGD 354
Query: 141 KCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW---DLRCKSSPKSNCAE--- 192
+C G+L G I S+ + L++ S D + IW D R + + + +
Sbjct: 355 RCEPKGSLSGSNAGITSI-EFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLS 413
Query: 193 -SFVFSSA-VVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNS-----IV 245
F+ +A +V G+H + R K ++ +++ + T V S +
Sbjct: 414 AKFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDI-VCTEQCVMSGHFDKKI 472
Query: 246 KFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDHRIYLYNVL 304
+FWD R S KE L G I++L +S L D L ++
Sbjct: 473 RFWDIRT-------------ESIVKELELLGRITALDLNSERTELLTCSRDD---LLKII 516
Query: 305 QLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKS 361
L G + Q FS G + S + + P+ +++ +GS+DG YVW V + + K
Sbjct: 517 DLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKH 576
Query: 362 HDGEVTAVNWCPNEAGKIVTSSDDYTVR-LWS 392
H + AV W P AG V S D LWS
Sbjct: 577 HSSPINAVAWSP--AGAHVVSVDKGNKAVLWS 606
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 76
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 77 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 136
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 137 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 190
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 191 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 242
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 243 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 299
Query: 387 TVRLW 391
T++LW
Sbjct: 300 TIKLW 304
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 106 (42.4 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 115 CWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGS 174
C +D +++T SGD I WD EK T GH G I L P + ++GS D +
Sbjct: 155 CRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSP-DMKTYITGSVDKT 213
Query: 175 FAIWDLR 181
+WD+R
Sbjct: 214 AKLWDVR 220
Score = 104 (41.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 31/117 (26%), Positives = 55/117 (47%)
Query: 277 ISSLSQDSNGVFLTASCM-DHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHI 335
+SS+ +G F ASC D +Y+ L+ D+ I + + + + + + ++
Sbjct: 235 VSSVCYHPSG-FGFASCSEDQTARMYD-LRADQ-QIAQYEPPQKNTGFTSCALSTSGRYL 291
Query: 336 LSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD-DYTVRLW 391
+ G +GN + W K Q L H+ +T ++ CPN G + S+ D VRLW
Sbjct: 292 MCGGIEGNVHSWDTMK-QRHTGTLSGHENRITCISLCPN--GMCLASTSWDQQVRLW 345
Score = 57 (25.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 118 KEDTNILTASGDQ--TIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSF 175
K D + GD KI + KK L GH + S+ +S V+GS DG
Sbjct: 29 KADCTLADKCGDMGDVPKIRFSSKK----ILKGHINKVNSV-HFAGDSRHCVTGSLDGKL 83
Query: 176 AIWD 179
IWD
Sbjct: 84 IIWD 87
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 163 (62.4 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 71/305 (23%), Positives = 137/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG ++ ++G + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTGHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 172 (65.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 71/293 (24%), Positives = 126/293 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +++ S D T+KIWD + L GH+G+++SL P + +L
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSP-DGKLL 807
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAESF-VFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
SGS D + +WD ++ ++S A L+ + S K ++
Sbjct: 808 ASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGE 867
Query: 226 VLYLKDEVSIATAS-AVNSIVKFWDTRNLKAQITQAWPHA--ESSSAKETRLHGISSLSQ 282
+ D S + S A + K + +L + I + W A E + E R + S++
Sbjct: 868 LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTI-KVWNPATGELQQSLEGRSGWVKSVAF 926
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKS-EICPNASHILSGSSD 341
+G L + + + L+N + +Q G S V+S P+ + S SSD
Sbjct: 927 SPDGKKLASGSEKNTVKLWNPATGEL--LQTLEG---HSQSVRSVAFSPDGKQLASSSSD 981
Query: 342 GNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDYTVRLWSL 393
+W + K HD + AV + P+ GK +V+ SDD T++LW L
Sbjct: 982 TTIKLWNSTTGELQQT-FKGHDLWIRAVAFSPD--GKHLVSGSDDNTIKLWDL 1031
Score = 148 (57.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 67/317 (21%), Positives = 136/317 (42%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
++A + + H ++I+ + + + + +AS D TIKIWD + L H+ S+
Sbjct: 820 DSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSV 879
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIW-----DLRCKSSPKSNCAESFVFS-------SAVV 201
+S+ P + +L S S D + +W +L+ +S +S FS S
Sbjct: 880 RSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSE 938
Query: 202 KGAHLL---SQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQIT 258
K L + + + + S S+ SV + D +A++S+ ++ +K W++ + Q
Sbjct: 939 KNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS-DTTIKLWNSTTGELQ-- 995
Query: 259 QAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSG 316
++ + + ++ S D G L + D+ I L+++ +L + H
Sbjct: 996 ------QTFKGHDLWIRAVA-FSPD--GKHLVSGSDDNTIKLWDLATSELQQSLEDHSRS 1046
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEA 376
+F P+ + S S D +W + L+ H V +V + P+
Sbjct: 1047 VHAVAF------SPDDKQLASSSLDSTIKLWDSATGELQRT-LEGHSQGVRSVTFSPD-- 1097
Query: 377 GKIVTSSD-DYTVRLWS 392
GK++ S+ D T++LW+
Sbjct: 1098 GKLLASNSYDGTIKLWN 1114
Score = 144 (55.7 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 83/371 (22%), Positives = 151/371 (40%)
Query: 126 ASGDQ--TIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCK 183
ASG + T+K+W+ + L GH+ S++S+ P L S S D + +W+
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNSTTG 992
Query: 184 SSPKSNCAESFVFSSAVVK--GAHLLSQSK---------RVSRRKAA----SMSITSVLY 228
++ + G HL+S S S + + S S+ +V +
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAF 1052
Query: 229 LKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVF 288
D+ +A++S ++S +K WD+ + Q T E S G+ S++ +G
Sbjct: 1053 SPDDKQLASSS-LDSTIKLWDSATGELQRT-----LEGHS------QGVRSVTFSPDGKL 1100
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKS-EICPNASHILSGSSDGNAYVW 347
L ++ D I L+N L G +Q R S +V S P+ + SG D +W
Sbjct: 1101 LASNSYDGTIKLWNPLT---GELQQTLTGR--SDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Query: 348 QVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSLENXXXXXXXXXX 405
+ + ++ L+ H + +V + P+ GK++ S S D T +LW +
Sbjct: 1156 --DSATGELLQTLEGHSDRIQSVVFSPD--GKLLASGSYDQTAKLW--DPATGELLQIFE 1209
Query: 406 XXXXXVMAIPSTECRKLFMNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQ 465
V ++ + KL + G K D + ++L +N D + +P+
Sbjct: 1210 GHSKWVESVAFSPDGKLLASSSYGETIKLWDPV--TGELLQTLNDPDESAGSVAFSPDGN 1267
Query: 466 K-KKIPSFDTK 475
+ + FDTK
Sbjct: 1268 RLASVDIFDTK 1278
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 164 (62.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 77/299 (25%), Positives = 126/299 (42%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C N L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 92 HEGEVY-CCKFHPWGNTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 148
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 208
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 209 RKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 264
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 265 -------VTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLR 317
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ S I GS+D YVW + KL H G V + + P E + SSD
Sbjct: 318 CSWSPDGSKIAGGSADRFVYVWDTTSRRI-LYKLPGHAGSVNELAFHPEEPIILSASSD 375
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 62/262 (23%), Positives = 117/262 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 135 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 194
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 195 CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 254
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 255 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIF-QGNVHNFE 312
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ---LDKGPIQHFSGCRIESFYVKSE 327
+ L S S D G + D +Y+++ L K P H +F+ +
Sbjct: 313 KNLLR--CSWSPD--GSKIAGGSADRFVYVWDTTSRRILYKLP-GHAGSVNELAFHPEEP 367
Query: 328 ICPNASHILSGSSDGNAYVWQV 349
I ILS SSD Y+ ++
Sbjct: 368 I------ILSASSDKRLYMGEI 383
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A + + QN L
Sbjct: 181 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAVQTF---QNTYQVL 224
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 225 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 283
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ IWD+R +PK C + F
Sbjct: 284 NTVRIWDVR-PFAPKERCVKIF 304
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 111 (44.1 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 31/85 (36%), Positives = 44/85 (51%)
Query: 112 FDLCWIKEDTNILTASGD--QTIKIWDAEK--KKCTGA--LMGHTGSIKSLCSHPTNSDI 165
+ L W T L A+GD + I +W ++ + GA L GH S++ L PT + +
Sbjct: 232 YGLAWSSLKTGDL-ATGDIIKKIYLWQMKEGGQWAVGANPLTGHKKSVEDLAWSPTETGL 290
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S DGS +WD R S+PK C
Sbjct: 291 LASCSADGSIKLWDTR--SAPKDAC 313
Score = 101 (40.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 335 ILSGSSDGNAYVWQVNKPQ-ADPIKL-KSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
I+SG DG +W + Q P+ L K H+ +T+V+W P+E + S +D +W
Sbjct: 337 IVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASGEDDQTTIWD 396
Query: 393 L 393
+
Sbjct: 397 I 397
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 74/301 (24%), Positives = 125/301 (41%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAE--KKKCTGALMGHTGSIKSLCSHPTNS 163
AH + + +C+ + + T D+ I +W+ + + L G GSI S+ P+ S
Sbjct: 338 AHLSEVNAVCFAPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGS 397
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVK-GAHLL---SQSKRVSR---- 215
+L + + +W + S ++ ++A K H S+ + V
Sbjct: 398 QVLAATYNQAA-QLWKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLG 456
Query: 216 RKAASMSITSVLYLKDEVS---IATASAVNSIVKFWDTRNLKA-QITQAWPHAESSSAKE 271
R S +I + Y D V I + + ++FWD+R Q+ S +
Sbjct: 457 RAYCSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLNLSH 516
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPN 331
+LH + S S+D+ T +D RI N+ Q+ + G + S + K+ P+
Sbjct: 517 DQLH-LLSCSRDN-----TLKVIDLRIS--NIRQVFRA-----DGFKCSSDWTKAVFSPD 563
Query: 332 ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYT-VRL 390
S+ L GSS+G Y+W VN + + H V AV WC +G V S D V L
Sbjct: 564 RSYALVGSSNGTLYIWDVNTGKLETSLQGPHCTAVNAVAWC--FSGNHVVSVDQVRKVVL 621
Query: 391 W 391
W
Sbjct: 622 W 622
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 164 (62.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 73/302 (24%), Positives = 125/302 (41%)
Query: 107 HQNAIFDLCWIKE-DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+N ++ + + I T S D+T K+W E KC GHT I L +P S +
Sbjct: 133 HRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP-QSTL 191
Query: 166 LVSGSRDGSFAIWDLRCKSSP---KSNCAE--SFVFSSA---VVKGA--HLLSQSKRVSR 215
+ +GS D + +WD++ + AE S F+++ ++ G+ H ++ + +
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251
Query: 216 RKAASM-----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAK 270
RK ++ I+S ++ D I T S ++ K WD N K T H +
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGS-MDKTCKLWDAVNGKCVATLTG-HDDE---- 305
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP 330
I D G + + D +++ + + G E K P
Sbjct: 306 ------ILDSCFDYTGKLIATASADGTARIFSAATREC--VTKLEGH--EGEISKISFNP 355
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIV-TSSDDYTVR 389
+ +L+GSSD A +W Q + L+ H E+ + + N G I+ T S D T R
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTGQCLQV-LEGHTDEIFSCAF--NYKGDIIITGSKDNTCR 412
Query: 390 LW 391
+W
Sbjct: 413 IW 414
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 68/303 (22%), Positives = 132/303 (43%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + ++ K + +T S D+T K+WD + L GH + ++ + D
Sbjct: 90 AHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS D + +W + C +F +A + QS V+ SM T+
Sbjct: 150 IATGSFDKTCKLWSVET-----GKCYHTFRGHTAEIVCLSFNPQSTLVA---TGSMDTTA 201
Query: 226 VLY-LK--DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKET--RLHG-ISS 279
L+ ++ +EV T + I ++T + IT ++ H + +T +++ I
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI-ITGSFDHTVTVWEADTGRKVYTLIGH 260
Query: 280 LSQDSNGVF-------LTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEICPN 331
++ S+ VF LT S MD L++ + G + +G E + S
Sbjct: 261 CAEISSAVFNWDCSLILTGS-MDKTCKLWDAVN---GKCVATLTGHDDE--ILDSCFDYT 314
Query: 332 ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
I + S+DG A ++ + KL+ H+GE++ +++ P + +++T S D T R+W
Sbjct: 315 GKLIATASADGTARIFSAATREC-VTKLEGHEGEISKISFNP-QGNRLLTGSSDKTARIW 372
Query: 392 SLE 394
+
Sbjct: 373 DAQ 375
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 35/115 (30%), Positives = 56/115 (48%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
++ H + I D C+ I TAS D T +I+ A ++C L GH G I + +P
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 161 TNSDILVSGSRDGSFAIWDLR---CKSSPKSNCAESFVFSSAV-VKGAHLLSQSK 211
+ +L +GS D + IWD + C + + E +FS A KG +++ SK
Sbjct: 356 QGNRLL-TGSSDKTARIWDAQTGQCLQVLEGHTDE--IFSCAFNYKGDIIITGSK 407
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 165 (63.1 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 77/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ D++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ-DLVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 68/274 (24%), Positives = 115/274 (41%)
Query: 47 HGEETPP-LAVSFCKTSKNSHIFAVSDEDGYVSLFD--SRRKLPSFACHRENAEKARISD 103
H P LA+ C + N + +D++ V +FD S + L + H + +++
Sbjct: 217 HSASIPGILALDLCPSDTNKILTGGADKN--VVVFDKSSEQILATLKGHTK-----KVTS 269
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNS 163
V H + DL + +AS D TI+IW C + H ++ L H T
Sbjct: 270 VVFHPSQ--DL--------VFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATG- 318
Query: 164 DILVSGSRDGSFAIWDLRC-----KSSPKSN-----CAE----SFVFSSAVVKGAHL--- 206
D L+S S D +A D++ K + +++ CA+ +F + +
Sbjct: 319 DYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWD 378
Query: 207 LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES 266
L + V+ S ITS+ + ++ +ATA A +S VK WD R LK T +
Sbjct: 379 LKERTNVANFPGHSGPITSIAFSENGYYLATA-ADDSSVKLWDLRKLKNFKT-----LQL 432
Query: 267 SSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL 300
+ E + SL D +G +L D +IY+
Sbjct: 433 DNNFE-----VKSLIFDQSGTYLALGGTDVQIYI 461
>POMBASE|SPBC6B1.10 [details] [associations]
symbol:prp17 "splicing factor Prp17" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC6B1.10 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 KO:K12816 GO:GO:0045292 HOGENOM:HOG000214672
PIR:T40651 RefSeq:NP_596089.1 HSSP:P61964 ProteinModelPortal:O43071
IntAct:O43071 STRING:O43071 EnsemblFungi:SPBC6B1.10.1
GeneID:2541168 KEGG:spo:SPBC6B1.10 OMA:ANTHAIY OrthoDB:EOG4CG3J4
NextBio:20802281 Uniprot:O43071
Length = 558
Score = 165 (63.1 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 73/312 (23%), Positives = 129/312 (41%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDA-EKKKCTGALMGHTGSIKS 155
K I W H I L + ++L + S D IKIW+ + GH I+
Sbjct: 256 KKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRD 315
Query: 156 LCSHPTNSDILVSGSRDGSFAIWD------LRCKSSPK-SNCAESFVFSSAVVKGAHLLS 208
L S + +S S D + +WD L C +S + +NC + F K L+
Sbjct: 316 L-SFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVK---FQVDPDKPNEFLA 371
Query: 209 QS--KRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES 266
+ KR+ + S I Y I + + + + +F T + + + W +
Sbjct: 372 GTADKRILQFDIRSPDIVQA-YDHHLGGINSITFLENGKRFVTTSDDSSM--RFWEYGTP 428
Query: 267 SSAK---ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ-LDKGPIQHFSGCRIESF 322
K + +H + ++ NG + +D+ IY+Y+ + + + F G +
Sbjct: 429 VPIKFVADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGY 488
Query: 323 YVKSEICPNASHILSGSSDGNA--YVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIV 380
++ P+ + SG S GNA + W+ K A KL +H G V ++ + P E K+
Sbjct: 489 SLEVGFSPDGRFVFSGDSSGNACFWDWKTCKLMA---KLPAHSGPVQSMAFHPQETSKVA 545
Query: 381 TSSD-DYTVRLW 391
TSS D +++ W
Sbjct: 546 TSSIVDGSIKYW 557
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 116 (45.9 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 31/121 (25%), Positives = 51/121 (42%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ S DG + ++D + ++E+ ++A DW Q + +
Sbjct: 74 SENNEHVLITSSGDGSLQIWDIAKPKGPLQVYKEHTQEAYSVDW--SQT--------RGE 123
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT K+WD K GH G I S P S S D + IWD+
Sbjct: 124 QLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDV 183
Query: 181 R 181
+
Sbjct: 184 K 184
Score = 107 (42.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 29/85 (34%), Positives = 45/85 (52%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALM---GHTGSIKS 155
R DW + +FD+ W + + ++L T+SGD +++IWD K K G L HT S
Sbjct: 60 RSFDW---NDGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPK--GPLQVYKEHTQEAYS 114
Query: 156 L-CSHPTNSDILVSGSRDGSFAIWD 179
+ S ++VSGS D + +WD
Sbjct: 115 VDWSQTRGEQLVVSGSWDQTAKLWD 139
Score = 88 (36.0 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V P + + +H E+ + +WC + +VT + D +++ W L N
Sbjct: 171 SASGDQTLRIWDVKAPGVRLV-IPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRN 228
Score = 66 (28.3 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 33/141 (23%), Positives = 59/141 (41%)
Query: 256 QITQAWPHAESSSAKETRLH-GI--SSL-SQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 311
Q + W A S + + H G+ S++ S G F +AS D + +++V K P
Sbjct: 133 QTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASG-DQTLRIWDV----KAPG 187
Query: 312 QHFSGCRIESFYVKSEICPNASHIL-SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVN 370
++ + + C ++L +G+ D + W + + L H V V
Sbjct: 188 VRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVK 247
Query: 371 WCPNEAGKIVTSSDDYTVRLW 391
+ P A + + S D+TVR W
Sbjct: 248 FSPFHATLLASCSYDFTVRFW 268
Score = 44 (20.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTA-VNWCPNEAGKIVTSSDDYTV 388
+A+ + S S D W +KP +P+ + H E T ++ ++ G++V + D V
Sbjct: 252 HATLLASCSYDFTVRFWDFSKP--NPLLETVEHHTEFTCGLDLSLHKCGQVVDCAWDELV 309
Query: 389 RLWS 392
++++
Sbjct: 310 KIYT 313
Score = 40 (19.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 21/109 (19%), Positives = 43/109 (39%)
Query: 192 ESFVFSSAV---VKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFW 248
E+ + + AV +KG L + + V + ++ V + ++ + + + V+FW
Sbjct: 209 ENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFW 268
Query: 249 DTRNLKAQITQAWPHAESSSAKETRLH--G-ISSLSQDSNGVFLTASCM 294
D + H E + + LH G + + D T SC+
Sbjct: 269 DFSKPNPLLETVEHHTEFTCGLDLSLHKCGQVVDCAWDELVKIYTPSCL 317
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 170 (64.9 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 82/315 (26%), Positives = 138/315 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC-SHPTNSDI 165
H A+ + + + + +ASGD T+KIWD L GH +KS+ SH +S +
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSH--DSRL 319
Query: 166 LVSGSRDGSFAIWD-----LRCKSSPKSNCAESFVFSS---AVVKGAHLLSQSKRVSRRK 217
L S S DG+ IWD L+ ++ S VFS + G++ ++ R+
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSN--DRTVRIWETT 377
Query: 218 AASM---------SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
+ S+ +V + D +A+AS + VK WDTR Q
Sbjct: 378 TGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGN-VKIWDTRTGSLQ--------NVLE 428
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSE 327
+ ++ +S S DS L AS D R + G +Q G + +V+S
Sbjct: 429 GHDDCVNSVS-FSPDSR---LLASASDDRTV--KIWHAATGSLQRTLEG---HNDWVRSV 479
Query: 328 ICPNASHILSGSSDG-NAYVWQV-NKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
+ + S +++ +SD +W P + L+SHD V +V + +++ + ++SDD
Sbjct: 480 VFSHDSRLIASASDDMTVKIWDTATVPLQN--NLESHDNWVRSVVFS-HDSRLLASASDD 536
Query: 386 YTVRLW-----SLEN 395
TV++W SLEN
Sbjct: 537 MTVKIWDTATGSLEN 551
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 163 (62.4 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 77/305 (25%), Positives = 135/305 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG-ALMGHTGSIKSLC---SH--- 159
H N + + W + I T S D TI++WD + +C G AL GH+ I SL H
Sbjct: 185 HYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVK 244
Query: 160 PTNSDILVSGSRDGSFAIWDL--R-CK--SSPKSNCAESFVFSSA--VVKGAHLLSQSKR 212
P + L S S+DG+ IWD R C+ S +N + + G+H ++ R
Sbjct: 245 PGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSH--DRTVR 302
Query: 213 V----SRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
V S+ + ++ + S + + +S++T A+ + +D K P
Sbjct: 303 VWDINSQGRCINI-LKSHAHWVNHLSLSTDYALR--IGAFDHTGKKPST----PEEAQKK 355
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEI 328
A E I + +S + +TAS D+ ++L+N L+ K PI +G + +V
Sbjct: 356 ALEN-YEKICKKNGNSEEMMVTASD-DYTMFLWNPLKSTK-PIARMTGHQKLVNHVA--F 410
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P+ +I+S S D + +W + + H V V W ++ +V+ S D T+
Sbjct: 411 SPDGRYIVSASFDNSIKLWD-GRDGKFISTFRGHVASVYQVAWS-SDCRLLVSCSKDTTL 468
Query: 389 RLWSL 393
++W +
Sbjct: 469 KVWDV 473
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 73/290 (25%), Positives = 125/290 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNS 163
H+ ++ C + + L ++G D+ I +W+ C L GH+G++ L + T+
Sbjct: 65 HEGEVY-CCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMEL-HYNTDG 121
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAE-SFVFSSAVVK-GAHLL---SQSKRVS---- 214
+L S S D + A+WD K SFV S + G L+ S V
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
Query: 215 RRKAASMSITS---VLYL--KDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
R+KAA + + VL + D + +++ +K WD R K T HA+S
Sbjct: 182 RKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRG-HADS--- 237
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGC--RIESFYVK 325
++ LS S G +L ++ MD+ + +++V + ++ F G E ++
Sbjct: 238 -------VTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLR 290
Query: 326 SEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNE 375
P+ S I +GS+D YVW + KL H G + V + P+E
Sbjct: 291 CSWSPDGSKIAAGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDE 339
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 154 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 197
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 198 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 256
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 257 NTVRVWDVR-PFAPKERCVKIF 277
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGVTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 150 (57.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 107 HQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +A+ DL W K N+L +AS D T+ +WD K L HT +++L HP +
Sbjct: 254 HTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQT 313
Query: 166 LVSGSRDGSFAIWDLR 181
L+SGS D S A++D R
Sbjct: 314 LISGSYDKSVALYDCR 329
Score = 56 (24.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 31 DVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRR 84
D D E+ ++++ EE P A + ++ ++ +D+D YV+L D+ +
Sbjct: 83 DRTLDDDELAGYDLDNYDEEDNPDAETIGESLLGLTVYGSNDQDPYVTLKDTEQ 136
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 74/301 (24%), Positives = 126/301 (41%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAE--KKKCTGALMGHTGSIKSLCSHPTNS 163
AH + + +C+ + + T D+ I +W+ + + L G GSI S+ P+ S
Sbjct: 338 AHLSEVNAVCFGPNSSLLATGGADRLIHLWNVVGGRLEANQTLEGAGGSITSVDFDPSGS 397
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVK-GAHLL---SQSKRVSR---- 215
+L + + +W + S ++ ++A K H S+ + V
Sbjct: 398 QVLAATYNQAA-QLWKVGETQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLG 456
Query: 216 RKAASMSITSVLYLKDEVS---IATASAVNSIVKFWDTRNLKA-QITQAWPHAESSSAKE 271
R S +I + Y D V I + + ++FWD+R Q+ S
Sbjct: 457 RAYCSRTINVLSYCNDVVCGDHIIISGHNDQKIRFWDSRGPHCIQVIPVQGRVTSLHLSY 516
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPN 331
+LH + S S+D+ T +D RI N+ Q+ + G + S + K+ P+
Sbjct: 517 DQLH-LLSCSRDN-----TLKVIDLRIS--NIRQVFRA-----DGFKCSSDWTKAVFSPD 563
Query: 332 ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD-YTVRL 390
S+ L+GSS+G+ Y+W VN + + H V AV WC +G V S D V L
Sbjct: 564 RSYALAGSSNGDLYIWDVNTGKLETSLQGPHCTAVNAVAWC--FSGNHVVSVDQGRKVVL 621
Query: 391 W 391
W
Sbjct: 622 W 622
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 150 (57.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 69 AVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL---T 125
A S +D Y++ + +K+ + ++A + + H + + C +N L T
Sbjct: 664 AFSSDDSYIATCSADKKVKIW----DSATGKLVHTYDEHSEQV-NCCHFTNKSNHLLLAT 718
Query: 126 ASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSS 185
S D +K+WD +K+C + GHT S+ C + ++L S S DG+ +WD+R +
Sbjct: 719 GSNDFFLKLWDLNQKECRNTMFGHTNSVNH-CRFSPDDELLASCSADGTLRLWDVRSANE 777
Query: 186 PKSNCAESFVFSS 198
KS + F SS
Sbjct: 778 RKSINVKRFFLSS 790
Score = 115 (45.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
E EK + D AH++ + + +D+ I T S D+ +KIWD+ K H+ +
Sbjct: 645 ETGEK--LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQV 702
Query: 154 KSLCSHPTNSD---ILVSGSRDGSFAIWDLRCK 183
C H TN +L +GS D +WDL K
Sbjct: 703 N--CCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733
Score = 66 (28.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/117 (23%), Positives = 53/117 (45%)
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGS 339
L QDS L + D + ++NV+ G I+ C + + I +A+ S S
Sbjct: 1052 LLQDSR---LLSWSFDGTVKVWNVIT---GRIERDFTCH-QGTVLSCAISSDATKFSSTS 1104
Query: 340 SDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+D A +W + P+ +LK H+G V + + + T D+ +R+W++ +
Sbjct: 1105 ADKTAKIWSFDL--LSPLHELKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSD 1158
>UNIPROTKB|G1LTM7 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9646
"Ailuropoda melanoleuca" [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=ISS] [GO:0001947 "heart looping" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0005814
"centriole" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005912 "adherens junction" evidence=ISS]
[GO:0005929 "cilium" evidence=ISS] [GO:0005932 "microtubule basal
body" evidence=ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0007417
"central nervous system development" evidence=ISS] [GO:0010842
"retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043066 GO:GO:0034613 GO:GO:0005814 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795 GO:GO:0045944
GO:GO:0005911 GO:GO:0007169 GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS
GO:GO:0005932 GO:GO:0042384 GO:GO:0035844 GO:GO:0001947
GO:GO:0030902 GO:GO:0070121 GO:GO:0070986 GO:GO:0001738
GO:GO:0071599 GO:GO:0035845 GO:GO:0030862 GO:GO:0002092
GO:GO:0039023 GO:GO:0039008 GO:GO:0010842 GO:GO:0065001
GO:GO:0031513 GeneTree:ENSGT00530000063479 EMBL:ACTA01002374
Ensembl:ENSAMET00000010877 Uniprot:G1LTM7
Length = 1036
Score = 147 (56.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 48/162 (29%), Positives = 72/162 (44%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY V L++ +PS RE H N I+D
Sbjct: 613 FCLAFSHNGRILAAACASRDGYPVILYE----IPSGRFMRELC---------GHLNIIYD 659
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D +LTAS D T +IW E T ++ H + + HP D++V+G D
Sbjct: 660 LCWSNDDRYVLTASSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVKDLVVTGCYD 719
Query: 173 GSFAIWDLRCKSSP-----KSNCAESFVFSSAV-VKGAHLLS 208
+W + + P + + SF+ S ++G H+ S
Sbjct: 720 SVIRVWKVDMREDPAILIRQFDTHRSFINSLCFDIEGHHMYS 761
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 25/107 (23%), Positives = 43/107 (40%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
++ W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 767 VIVVWNTYVKVNDVQHSVRHWSVNKEIKESEFKGIPISYLEAHPNGKRLLIHTKDSTLRI 826
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS DG YVW
Sbjct: 827 MDLRIL---AARRFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVW 870
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|D2H0U8 [details] [associations]
symbol:PANDA_003072 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001738 "morphogenesis of
a polarized epithelium" evidence=ISS] [GO:0001947 "heart looping"
evidence=ISS] [GO:0002092 "positive regulation of receptor
internalization" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0005814 "centriole" evidence=ISS] [GO:0005911
"cell-cell junction" evidence=ISS] [GO:0005912 "adherens junction"
evidence=ISS] [GO:0005929 "cilium" evidence=ISS] [GO:0005932
"microtubule basal body" evidence=ISS] [GO:0007169 "transmembrane
receptor protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0007417 "central nervous system development" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0005932 GO:GO:0042384 GO:GO:0035844
GO:GO:0001947 GO:GO:0030902 GO:GO:0070121 GO:GO:0070986
GO:GO:0001738 GO:GO:0071599 GO:GO:0035845 GO:GO:0030862
GO:GO:0002092 GO:GO:0039023 GO:GO:0039008 GO:GO:0010842
GO:GO:0065001 HOGENOM:HOG000033864 GO:GO:0031513 EMBL:GL192415
ProteinModelPortal:D2H0U8 Uniprot:D2H0U8
Length = 1084
Score = 147 (56.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 48/162 (29%), Positives = 72/162 (44%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY V L++ +PS RE H N I+D
Sbjct: 549 FCLAFSHNGRILAAACASRDGYPVILYE----IPSGRFMRELC---------GHLNIIYD 595
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D +LTAS D T +IW E T ++ H + + HP D++V+G D
Sbjct: 596 LCWSNDDRYVLTASSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVKDLVVTGCYD 655
Query: 173 GSFAIWDLRCKSSP-----KSNCAESFVFSSAV-VKGAHLLS 208
+W + + P + + SF+ S ++G H+ S
Sbjct: 656 SVIRVWKVDMREDPAILIRQFDTHRSFINSLCFDIEGHHMYS 697
Score = 67 (28.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/107 (23%), Positives = 43/107 (40%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
++ W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 703 VIVVWNTYVKVNDVQHSVRHWSVNKEIKESEFKGIPISYLEAHPNGKRLLIHTKDSTLRI 762
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS DG YVW
Sbjct: 763 MDLRIL---AARRFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVW 806
>SGD|S000002772 [details] [associations]
symbol:CDC40 "Pre-mRNA splicing factor" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA]
[GO:0000389 "mRNA 3'-splice site recognition" evidence=IGI]
[GO:0000348 "mRNA branch site recognition" evidence=IGI]
[GO:0005681 "spliceosomal complex" evidence=IEA;IDA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IGI;IMP] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IGI;IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000002772 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938
GO:GO:0005681 EMBL:U28373 RefSeq:NP_010652.3 GeneID:851968
KEGG:sce:YDR364C KO:K12816 GO:GO:0000350 GO:GO:0000389
GO:GO:0000348 HOGENOM:HOG000214672 GeneTree:ENSGT00530000063583
OrthoDB:EOG4CG3J4 EMBL:U17018 PIR:S61159 RefSeq:NP_010654.3
ProteinModelPortal:P40968 SMR:P40968 DIP:DIP-1111N IntAct:P40968
MINT:MINT-617580 STRING:P40968 PaxDb:P40968 EnsemblFungi:YDR364C
GeneID:851972 KEGG:sce:YDR366C CYGD:YDR364c OMA:KGDGPWG
NextBio:970088 Genevestigator:P40968 GermOnline:YDR364C
Uniprot:P40968
Length = 455
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 79/339 (23%), Positives = 134/339 (39%)
Query: 65 SHIFAVSDED----GYVSL-----FDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLC 115
SH + S++D GY+ D R + SF C+ K I ++ H L
Sbjct: 113 SHFYGKSEKDYQGRGYLYPPNDVDVDLREERISFRCY---LPKKVIRNYPGHPEGTTALK 169
Query: 116 WIKEDTNILTASG-DQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDG 173
++ + +++ + G D TIKIWD +C GH IK+L + +S S D
Sbjct: 170 FLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKAL-RFTEDCQSFLSSSFDR 228
Query: 174 SFAIWDL---RCKSSPKSNCAESFVFSSAVVKGAHL--LSQSK--RVSRRKAASMSITSV 226
S IWD + K+ N + V S + LS SK R + + +
Sbjct: 229 SVKIWDTETGKVKTRLHLNSTPADVESRPTNPHEFIVGLSNSKILHYDDRVSENQGLVQT 288
Query: 227 LYLKDEVSIATASAVNSIVKFWDTRNLKA-QITQAWPHAESSSAKETRLHGISSLSQDSN 285
Y SI KF + K +I + + +T H + L+ +
Sbjct: 289 -YDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPS 347
Query: 286 GVFLTASCMDHRIYLYNVL-QLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNA 344
+ A MD+RIY +++ + + P + F G + + + +I SG S
Sbjct: 348 QNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRL 407
Query: 345 YVWQVNKPQA-DPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
+ W N + + IK+ + +T V+W P E K++ S
Sbjct: 408 FTWDWNTSRLLNNIKIPGNK-PITQVDWHPQETSKVICS 445
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 112 (44.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/137 (24%), Positives = 59/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSF-ACHRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P H + V
Sbjct: 228 GDDRP---LSYCHFSPNSKLLATACWSGLCKLWS----VPDCNLVHTLRGHSTNVGAIVF 280
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A L K+D N+ + + D ++K+W E + + GH+ + + HP+ L
Sbjct: 281 HPKATVSLD--KKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGR-FL 337
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 338 GTTCYDHSWRLWDLEAQ 354
Score = 96 (38.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN H+ +GS D VW + + + + +H VT V + PN ++T + D T +
Sbjct: 416 PNGYHVATGSGDNTCKVWDLRQRKCI-YTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAK 474
Query: 390 LWS 392
+W+
Sbjct: 475 IWT 477
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + + + T D ++WD +C L GH I L P N +
Sbjct: 363 HSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSP-NGYHV 421
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 422 ATGSGDNTCKVWDLR 436
Score = 82 (33.9 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 324 VKSEICPN-ASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVT 381
VK E PN + +L+G+ D A +W P P+K L H+G+V ++ + I T
Sbjct: 454 VKFE--PNHGNFLLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISLDGQLIAT 508
Query: 382 SSDDYTVRLWSLE 394
S D T +LW+ E
Sbjct: 509 CSYDRTFKLWTAE 521
Score = 76 (31.8 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
++D H + + W + T D + ++WD E ++ GH+ + + H
Sbjct: 315 VADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFH- 373
Query: 161 TNSDILVSGSRDGSFAIWDLR 181
T+ + +G D +WDLR
Sbjct: 374 TDGSLAGTGGLDAFGRVWDLR 394
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 114 (45.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/121 (24%), Positives = 51/121 (42%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ DG + L+D+ + ++E+A++ DW Q + +
Sbjct: 76 SENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDW--SQT--------RGE 125
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD K GH I S P S S D + IWD+
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Query: 181 R 181
+
Sbjct: 186 K 186
Score = 87 (35.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 173 SASGDQTLRIWDV-KAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN 230
Score = 72 (30.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 210 NENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 269
Query: 391 WS 392
W+
Sbjct: 270 WN 271
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/62 (22%), Positives = 29/62 (46%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTA-VNWCPNEAGKIVTSSDDYTVR 389
+AS + S S D W +KP + ++ H E T +++ ++ S D T++
Sbjct: 254 HASVLASCSYDFTVRFWNFSKPDS-LLETVEHHTEFTCGLDFSLQSPTQVADCSWDETIK 312
Query: 390 LW 391
++
Sbjct: 313 IY 314
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 162 (62.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 69/304 (22%), Positives = 135/304 (44%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 392 FVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALC---IQ 448
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
+ L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 449 GNKLYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 505
Query: 223 ITSVLYLKDEVS---------IATASAVNS----IVKFWDTRNLKAQITQAWPHAESSSA 269
+ + L LK E++ +A+ + + S +K WD RNL+ H +S
Sbjct: 506 VGTELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECV------HVLQTSG 559
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC 329
+ S++ ++ + ++ I+++++ K ++ +G + + Y + I
Sbjct: 560 GS-----VYSIAVTNHHI--VCGTYENLIHVWDIET--KEQVRTLTG-HVGTVYALAVIS 609
Query: 330 -PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P+ + + S S D + VW ++ L+ H G VTA+ G++ + + D TV
Sbjct: 610 TPDQTKVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTV 665
Query: 389 RLWS 392
++W+
Sbjct: 666 KVWT 669
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 67/266 (25%), Positives = 119/266 (44%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAV 200
KC G +GH G + LC + D+L SGS D + +WD C + C ++ +
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSIG-DLLFSGSSDKTIKVWDT-CTTY---KCQKTLEGHDGI 441
Query: 201 VKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSI-ATASAVNSIVKFWD---TRNLKAQ 256
V A + +K S ++ + + L+ +I A + V ++V + + +LKA
Sbjct: 442 VL-ALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA- 499
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L N ++ S I ++++ L+ +
Sbjct: 500 -IKVWDIVGTELKLKKELTGLNHWVRALVASQNYLY---SGSYQTIKIWDIRNLECVHVL 555
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVN-KPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + K Q L H G V AV
Sbjct: 556 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIETKEQVRT--LTGHVGTVYALAV 607
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 608 ISTPDQT-KVFSASYDRSLRVWSMDN 632
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 136 (52.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 29/101 (28%), Positives = 50/101 (49%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNIL---TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC 157
+ + H + + C ++N L T S D +K+WD +K+C + GHT S+ S C
Sbjct: 428 VQSYDEHSEQV-NCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSV-SHC 485
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSS 198
+ +L S S DG+ +WD++ + KS + F +S
Sbjct: 486 RFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNS 526
Score = 97 (39.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 32/119 (26%), Positives = 55/119 (46%)
Query: 69 AVSDEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTAS 127
A EDG ++ + + L F E EK + + AH++ + + +D I T S
Sbjct: 357 ACFSEDGQRIASCGADKTLQVFKA--ETGEK--LLEIKAHEDEVLCCAFSADDRFIATCS 412
Query: 128 GDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD---ILVSGSRDGSFAIWDLRCK 183
D+ +KIW++ + + H+ + C H TN+ +L +GS D +WDL K
Sbjct: 413 VDKKVKIWNSVTGELVQSYDEHSEQVN--CCHFTNNSNHLLLATGSSDYFLKLWDLNQK 469
Score = 77 (32.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 29/139 (20%), Positives = 61/139 (43%)
Query: 259 QAWP-HAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC 317
Q W +E + + + + N L+ S D + ++N++ G I+ C
Sbjct: 773 QVWNWQSEETVSLQAHQETVKDFRLLKNSRLLSWS-FDGTVKVWNIIT---GRIEKDFVC 828
Query: 318 RIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEA 376
++ + +I P+A+ S S+D A +W + P+ +L+ H G V + +
Sbjct: 829 HQDTV-LSCDISPDATKFSSTSADKTAKIWSFDL--LSPLHELRGHKGCVRCSAFSVDST 885
Query: 377 GKIVTSSDDYTVRLWSLEN 395
+ T D+ +R+W++ N
Sbjct: 886 -LLATGDDNGEIRIWNVSN 903
Score = 45 (20.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 7/20 (35%), Positives = 16/20 (80%)
Query: 377 GK-IVTSSDDYTVRLWSLEN 395
GK +++SSDD +++W+ ++
Sbjct: 760 GKNVISSSDDSAIQVWNWQS 779
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 120 (47.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 48/159 (30%), Positives = 72/159 (45%)
Query: 107 HQNAIFDLCWIKE-DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+N ++ + + + T S D+T K+W AE KC GHT I L +P S +
Sbjct: 133 HRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNP-QSTL 191
Query: 166 LVSGSRDGSFAIWDLRCK---SSPKSNCAE--SFVFSSA---VVKGA--HLLSQSKRVSR 215
+ +GS D + +WD+ S+ + AE S F++ +V G+ H S
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG 251
Query: 216 RKAASMS-----ITSVLYLKDEVSIATASAVNSIVKFWD 249
RK +S I+ V + D IATAS S K WD
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSC-KVWD 289
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00034
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ I +C+ + + +LTAS D+T ++W + C L GH+ I S C+ D +
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFS-CAFNYEGDTI 402
Query: 167 VSGSRDGSFAIW 178
++GS+D + IW
Sbjct: 403 ITGSKDNTCRIW 414
Score = 102 (41.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
I TAS D++ K+WDAE +C L+GH + +C + T ++ + S DG+ ++
Sbjct: 276 IATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRVF 330
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 24/86 (27%), Positives = 37/86 (43%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
E+ E+ +S H I LC+ ++T S D T +WD + L GH G I
Sbjct: 207 ESGEE--VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEI 264
Query: 154 KSLCSHPTNSDILVSGSRDGSFAIWD 179
S + ++ + S D S +WD
Sbjct: 265 -SCVQFNWDCSLIATASLDKSCKVWD 289
Score = 84 (34.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 317 CRIESFYVK-SEICPNA--SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEV--TAVNW 371
C++E + S++C NA S +L+ S D + VW V K A L+ H E+ A N+
Sbjct: 339 CQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCV-KTGACLQVLEGHSDEIFSCAFNY 397
Query: 372 CPNEAGKIVTSSDDYTVRLW 391
E I+T S D T R+W
Sbjct: 398 ---EGDTIITGSKDNTCRIW 414
Score = 79 (32.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 327 EICPNASH--ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAG-KIVTSS 383
++C N + I + S+DG + V+ + Q +L+ H GE++ V C N G +++T+S
Sbjct: 308 DVCFNYTGQLIATASADGTSRVFSTDTFQC-LCQLEGHKGEISKV--CFNAQGSRVLTAS 364
Query: 384 DDYTVRLWSLE 394
D T R+W ++
Sbjct: 365 VDKTSRVWCVK 375
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 228 DLC--PSDTNKILTGGADKNVVVFDKSTEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 284
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 285 DATIRIW-----SVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 337
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 338 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 396
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 397 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 451
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 452 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 504
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 76/297 (25%), Positives = 133/297 (44%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN ILT D+ + ++D ++ L GHT + S+ HP+ +++ S S
Sbjct: 237 DLC--PADTNKILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQ-ELVFSASP 293
Query: 172 DGSFAIWDLRCKSSPKSNCAESF-VFSSAVV------KGAHLLSQSKRVSRRKAASMSIT 224
D + IW S P ++C + SAV G +LLS S + A S T
Sbjct: 294 DATIRIW-----SVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSD--DQYWAFSDIQT 346
Query: 225 SVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG--IS 278
+ K DE S T + + + T + +QI + W E ++ H I+
Sbjct: 347 GRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQI-KIWDLKERTNVANFPGHSGPIT 405
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FYVKSEICPNASHILS 337
S++ NG +L + D + L+++ +L ++F ++++ F VKS I + L+
Sbjct: 406 SIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFEVKSLIFDQSGTYLA 460
Query: 338 -GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
G +D Y+ K + + H G T V + + A I ++ D +++ +SL
Sbjct: 461 LGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIASTGMDRSLKFYSL 513
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 114 (45.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/85 (32%), Positives = 46/85 (54%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALM---GHTGSIKS 155
R DW + +FD+ W +++ ++L T SGD ++++WD K TG L HT + S
Sbjct: 57 RSFDW---SDGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYS 111
Query: 156 L-CSHPTNSDILVSGSRDGSFAIWD 179
+ S ++VSGS D + +WD
Sbjct: 112 VDWSQTRGEQLVVSGSWDQTVKVWD 136
Score = 106 (42.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 28/118 (23%), Positives = 48/118 (40%)
Query: 64 NSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNI 123
N H+ DG + L+D+ + ++E+ ++ DW Q + + +
Sbjct: 74 NEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW--SQT--------RGEQLV 123
Query: 124 LTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
++ S DQT+K+WD GH I S P S S D + IWD++
Sbjct: 124 VSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK 181
Score = 86 (35.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 168 SASGDQTLRIWDV-KTAGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRN 225
Score = 73 (30.8 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 205 NENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 264
Query: 391 WS 392
W+
Sbjct: 265 WN 266
Score = 44 (20.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTA-VNWCPNEAGKIVTSSDDYTV 388
+AS + S S D W +KP DP+ + H E T ++ ++ S D T+
Sbjct: 249 HASVLASCSYDFTVRFWNFSKP--DPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETI 306
Query: 389 RLW 391
+++
Sbjct: 307 KIY 309
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 98/431 (22%), Positives = 174/431 (40%)
Query: 60 KTSKNSHIFAVS-DEDGYVSLF----DSRRKLPSFACHR----ENAEKARISDWVAHQNA 110
++ +F++ DED YV+ DS++ + +F E RI AH+
Sbjct: 46 RSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETP 105
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC-SHPTNSDILVSG 169
+ + +T + T + +K+WD T + GH G I +LC N+ +L SG
Sbjct: 106 VITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASG 165
Query: 170 SRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVK--GAHLLSQSK-------RVSRRKAAS 220
+ D +WDL S S V + G+ LLS S+ + +R A
Sbjct: 166 ADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVR 225
Query: 221 M-----SITSVLYLK---DEVSIATASAVNSIVKFWDTRN-LKAQITQAWPHAESSSAKE 271
S+ ++ ++ +E + TA N I+ WD ++ + H+E+++ +
Sbjct: 226 TIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILA-WDWKSGSRLDPGVDTTHSETNAIIQ 284
Query: 272 TRLHGISSL-SQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCR-IESFYVKSEIC 329
++L S S+ L + ++ + +L+ G C I ++ +C
Sbjct: 285 VVPFSENTLLSVHSDLSLLLRKRVPGEGFI-TIKKLN-GSFDEVIDCAWIGDDHLA--VC 340
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
N I S+DG V+ V + D + L S + V W + T + D TV
Sbjct: 341 SNTEFIDVISTDGTQ-VFGVLEGHTDIVLTLDSSEDGV----W-------LATGAKDNTV 388
Query: 389 RLWSLENXXXXXXXXXXXXXXXVMAIPSTECRKLFMNGEPGWLAKGS-DRSYNSDDVLNQ 447
RLW+L N ++ + L +NG P +LA S DR+ ++ +Q
Sbjct: 389 RLWNL-NIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQ 447
Query: 448 INSSDPKNMPI 458
+N SD N +
Sbjct: 448 LNKSDFSNRAV 458
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 114 (45.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 35/108 (32%), Positives = 55/108 (50%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALM---GHTGSIKS 155
R DW + +FD+ W + + +IL T SGD ++++WD K TG L HT + S
Sbjct: 62 RSFDW---NDGLFDVTWSENNEHILVTCSGDGSLQLWDTAK--ATGPLQVYKEHTQEVYS 116
Query: 156 L-CSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCA----ESFVFSS 198
+ S ++VSGS D + +WD + KS C ES ++S+
Sbjct: 117 VDWSQTRGEQLVVSGSWDQTVKLWD---PTVGKSLCTFRGHESVIYST 161
Score = 112 (44.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/121 (24%), Positives = 50/121 (41%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N HI DG + L+D+ + ++E+ ++ DW Q + +
Sbjct: 76 SENNEHILVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW--SQT--------RGE 125
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD K GH I S P S S D + IWD+
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Query: 181 R 181
+
Sbjct: 186 K 186
Score = 86 (35.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 173 SASGDQTLRIWDV-KSTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN 230
Score = 72 (30.4 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 210 NENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 269
Query: 391 WS 392
W+
Sbjct: 270 WN 271
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 161 (61.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 72/299 (24%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 391 FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCK 450
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 451 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 504
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A T + + ++ + R +
Sbjct: 505 VGTELKLKKELT-----GLNH----W-VRALVAAQTYLYSGSYQTIKIWDIRTLDCIHVL 554
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 555 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 613
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 614 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 668
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 65/266 (24%), Positives = 114/266 (42%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + + D+L SGS D + +WD C + E + +
Sbjct: 386 KCKGTFVGHQGPVWCLCVY-SMGDLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 443
Query: 199 AVVKGAHLLSQSK--RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQ 256
++G L S S + ++ + + D S+ N + + +LKA
Sbjct: 444 LCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLF----SGSLKA- 498
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L ++ S I ++++ LD +
Sbjct: 499 -IKVWDIVGTELKLKKELTGLNHWVRALVAAQTYLY---SGSYQTIKIWDIRTLDCIHVL 554
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 555 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 606
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 607 ISTPDQT-KVFSASYDRSLRVWSMDN 631
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 72/299 (24%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 234 FVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCR 293
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H L S + K +
Sbjct: 294 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDI- 347
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 348 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 397
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 398 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 456
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 457 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 511
Score = 128 (50.1 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 65/265 (24%), Positives = 119/265 (44%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + D+L SGS D + +WD C + E + +
Sbjct: 229 KCKGTFVGHQGPVWCLCVYSVG-DLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 286
Query: 199 AVVKGAHLLSQSKRVSRRKAASMSITSVLYLK-DEVSIATASAVNSIVKFWDTRNLKAQI 257
++G L S S + ++ V ++ + + T + ++++ F + +LKA
Sbjct: 287 LCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLL-F--SGSLKA-- 341
Query: 258 TQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH 313
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 342 IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVLQ 398
Query: 314 FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAVN 370
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 399 TSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAVI 450
Query: 371 WCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 451 STPDQT-KVFSASYDRSLRVWSMDN 474
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 46/154 (29%), Positives = 73/154 (47%)
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
D + + S D+TIK+WD + +C L H ++K+LC + L SGS D + +WD
Sbjct: 552 DKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLC---ISGQYLFSGSNDKTIKVWD 608
Query: 180 L---RCKSSPKSNCAESFVFSSAVVKGAHLLSQSK----RVSRRKAASMSIT-------- 224
L RC + K + +V + ++ G +L S S RV K+ S T
Sbjct: 609 LKTFRCNYTLKGHT--KWVTTICIL-GTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWV 665
Query: 225 SVLYLKDEVSIATASAVNSIVKFWDTRNLKAQIT 258
+ + D++ + TAS N+I K WD L+ T
Sbjct: 666 EHMVICDKL-LFTASDDNTI-KIWDLETLRCNTT 697
Score = 125 (49.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ + +C+ D + + S D +IK+WD +K +C L GH + ++ N L
Sbjct: 501 HEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVL---LNDKYL 555
Query: 167 VSGSRDGSFAIWDLR---CKSSPKSNCAESFVFSSAVVKGAHLLSQS 210
SGS D + +WDL+ CK + +S+ + + G +L S S
Sbjct: 556 FSGSSDKTIKVWDLKTLECKYTLESHAR---AVKTLCISGQYLFSGS 599
Score = 120 (47.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
+H A+ LC + + + S D+TIK+WD + +C L GHT + ++C TN
Sbjct: 580 SHARAVKTLCISGQ--YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--- 634
Query: 166 LVSGSRDGSFAIWDLR 181
L SGS D + +W+L+
Sbjct: 635 LYSGSYDKTIRVWNLK 650
Score = 115 (45.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 95 NAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWD--AEKKKCTGALMGHTGS 152
N E ++ + + + LC D + T D +I+++D ++ +C L GH G
Sbjct: 447 NLETIKLIETIKGYHVTSHLCIC--DNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGP 504
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
++S+C N L SGS D S +WDL+
Sbjct: 505 VESICY---NDQYLFSGSSDHSIKVWDLK 530
Score = 84 (34.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYT 387
IC +++ SGS D VW + + L+ HD V + C + T+SDD T
Sbjct: 628 ICILGTNLYSGSYDKTIRVWNLKSLECSAT-LRGHDRWVEHMVICDK---LLFTASDDNT 683
Query: 388 VRLWSLE 394
+++W LE
Sbjct: 684 IKIWDLE 690
Score = 75 (31.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS 383
VK+ +C + ++ SGS+D VW + + + LK H VT + C + + S
Sbjct: 585 VKT-LCISGQYLFSGSNDKTIKVWDLKTFRCN-YTLKGHTKWVTTI--CILGTN-LYSGS 639
Query: 384 DDYTVRLWSLEN 395
D T+R+W+L++
Sbjct: 640 YDKTIRVWNLKS 651
Score = 49 (22.3 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 11/58 (18%), Positives = 27/58 (46%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVN-WCPNEAGKIVTSSDDYTVRLW 391
+ + S D +W + + + L+ H+ V + W + +++ S D ++R+W
Sbjct: 675 LFTASDDNTIKIWDLETLRCNTT-LEGHNATVQCLAVWEDKKC--VISCSHDQSIRVW 729
>DICTYBASE|DDB_G0275073 [details] [associations]
symbol:pwp1 "periodic tryptophan protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0275073 GO:GO:0005829 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0006364 KO:K14791
OMA:ICARNED RefSeq:XP_643788.1 ProteinModelPortal:Q869X0
STRING:Q869X0 EnsemblProtists:DDB0235359 GeneID:8619833
KEGG:ddi:DDB_G0275073 InParanoid:Q869X0 ProtClustDB:CLSZ2455247
Uniprot:Q869X0
Length = 569
Score = 111 (44.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 106 AHQNAIFDLCWIKEDTNILTA-SGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
+H++ + L W N+L + S D T+K+WD ++C H + L +
Sbjct: 261 SHRDGVMSLSWNSHQRNVLASGSSDNTVKVWDITTQQCLNTFTHHKDKVSCLHWNSHEKT 320
Query: 165 ILVSGSRDGSFAIWDLRCKSS 185
L+ GS D +I D+R S
Sbjct: 321 ALLIGSHDKHVSILDVRAPDS 341
Score = 96 (38.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 331 NASHILSGSSDGNAYVWQVNK-PQADPI-KLK-SHDGEVTAVNWCPNEAGKIVTSSDDYT 387
N + G+ DG + A P+ ++ S G V+ ++CP + G T S D+T
Sbjct: 360 NPKEFIVGTDDGRLLCYDATLGTAAAPVWSVQASQKGSVSCFSYCPGQVGFFATGSSDHT 419
Query: 388 VRLWSLE 394
V+LW+LE
Sbjct: 420 VKLWNLE 426
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 156 (60.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 45/158 (28%), Positives = 71/158 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ AI DL W ++ I +AS D T+ WD E + +GH I S+ ++L
Sbjct: 108 HKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEML 167
Query: 167 VSGSRDGSFAIWDLRCKSS--------PKSNCAESF----VFSSAVVKGAHLLS-QSKRV 213
VS S DG+ IWD R K + P + A+S VFS + H+ + K +
Sbjct: 168 VSASDDGTMGIWDPRQKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAI 227
Query: 214 SRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTR 251
A M + L + + +++ +S V+ WD R
Sbjct: 228 VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIR 265
>UNIPROTKB|E1BFN3 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060271 "cilium morphogenesis" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0005912 "adherens
junction" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0031513
"nonmotile primary cilium" evidence=ISS] [GO:0005932 "microtubule
basal body" evidence=ISS] [GO:0005929 "cilium" evidence=ISS]
[GO:0005814 "centriole" evidence=ISS] [GO:0050795 "regulation of
behavior" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISS] [GO:0035845 "photoreceptor cell outer segment
organization" evidence=ISS] [GO:0034613 "cellular protein
localization" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0007169 "transmembrane receptor
protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0070986 "left/right axis specification"
evidence=ISS] [GO:0070121 "Kupffer's vesicle development"
evidence=ISS] [GO:0039023 "pronephric duct morphogenesis"
evidence=ISS] [GO:0035844 "cloaca development" evidence=ISS]
[GO:0001947 "heart looping" evidence=ISS] [GO:0042384 "cilium
assembly" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0065001 "specification of axis polarity"
evidence=ISS] [GO:0039008 "pronephric nephron tubule morphogenesis"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0030862 "positive regulation of polarized epithelial cell
differentiation" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0007417 "central nervous system development"
evidence=ISS] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=ISS] [GO:0033365 "protein localization to organelle"
evidence=IEA] Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050795 GO:GO:0045944 GO:GO:0005911
GO:GO:0007169 SUPFAM:SSF50044 GO:GO:0005912 GO:GO:0033365
OMA:FKGIPIS GO:GO:0005932 GO:GO:0042384 GO:GO:0035844 GO:GO:0001947
GO:GO:0030902 GO:GO:0070121 GO:GO:0070986 GO:GO:0001738
GO:GO:0071599 GO:GO:0035845 GO:GO:0030862 GO:GO:0002092
GO:GO:0039023 GO:GO:0039008 GO:GO:0010842 GO:GO:0065001
GO:GO:0031513 GeneTree:ENSGT00530000063479 EMBL:DAAA02026720
EMBL:DAAA02026721 IPI:IPI00694251 Ensembl:ENSBTAT00000023877
Uniprot:E1BFN3
Length = 1142
Score = 151 (58.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 613 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 659
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW K+D ILTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 660 LCWSKDDRYILTASSDGTARIWRNEINNTNTFRVLPHPSFVYTAKFHPVVRELVVTGCYD 719
Query: 173 GSFAIWDLRCKSSP-----KSNCAESFVFSSAV-VKGAHLLS 208
IW++ + P + + +SF+ S ++G H+ S
Sbjct: 720 SVIRIWEVDMRQDPAVLIRQFDTHKSFINSLCFDIEGHHMYS 761
Score = 61 (26.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 27/108 (25%), Positives = 45/108 (41%)
Query: 244 IVKFWDTRNLKAQITQ-AWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIY 299
++ W+T +K Q + H + + KE+ GI S L NG L D +
Sbjct: 767 VIVVWNTY-VKVNDAQHSVRHWSINKEIKESEFKGIPISYLEVHPNGKRLLIHTKDSTLR 825
Query: 300 LYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
+ ++ L + F G + S + P + + +GS DG YVW
Sbjct: 826 IMDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVW 870
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 77/295 (26%), Positives = 127/295 (43%)
Query: 108 QNAIFDLCWIK--EDTN--ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPT 161
+ IF WI + T ILT DQT +IW E K + GHT +K + +
Sbjct: 83 EECIFHDDWISSVQATEEWILTGCYDQTARIWSLEGKSIM-TIAGHTEVVKDVAWVKQDS 141
Query: 162 NSDILVSGSRDGSFAIWDLRC-KSSPKS-NCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
S +L+S S D + +W+ K+ K+ +C + +V A +++K S
Sbjct: 142 LSCLLISASMDQTILLWEWNVEKNKVKALHCCRGH--AGSVDSVAVDCTRTKFCSGSWDK 199
Query: 220 SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISS 279
+ I S + +E + A+ N K T L +T+ P A S E ISS
Sbjct: 200 MLKIWSAVPTDEEDEMEEAA--NRPRKKQKTEQLG--LTRT-PLATLSGHTEA----ISS 250
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSG 338
+ +AS DH I L++ + G ++ +G ++ + S +C + SG
Sbjct: 251 VLWSDAEEICSAS-WDHTIKLWDA---ETGGLKSTLTGNKVFNSVSYSPLC---RRLASG 303
Query: 339 SSDGNAYVWQVNKPQADPI--KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S+D + +W + L SH G VT+V W P ++++ S D V+LW
Sbjct: 304 STDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLW 358
Score = 154 (59.3 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 80/328 (24%), Positives = 131/328 (39%)
Query: 74 DGYVSLFDSRRKLPSFACHRENA-----EKARISDWVAHQNAIFDLCWIKEDTN---ILT 125
D ++S + + C+ + A E I H + D+ W+K+D+ +++
Sbjct: 89 DDWISSVQATEEWILTGCYDQTARIWSLEGKSIMTIAGHTEVVKDVAWVKQDSLSCLLIS 148
Query: 126 ASGDQTIKIWD--AEKKKCTG--ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
AS DQTI +W+ EK K GH GS+ S+ T + SGS D IW
Sbjct: 149 ASMDQTILLWEWNVEKNKVKALHCCRGHAGSVDSVAVDCTRTKFC-SGSWDKMLKIWSA- 206
Query: 182 CKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASAV 241
+ + E+ K L ++ + +I+SVL+ D I +AS
Sbjct: 207 VPTDEEDEMEEAANRPRKKQKTEQLGLTRTPLATLSGHTEAISSVLW-SDAEEICSASWD 265
Query: 242 NSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG---ISSLSQDSNGVFLTASCMDHRI 298
++I K WD AE+ K T L G +S+S L + D I
Sbjct: 266 HTI-KLWD--------------AETGGLKST-LTGNKVFNSVSYSPLCRRLASGSTDRHI 309
Query: 299 YLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH-ILSGSSDGNAYVWQVNKPQADPI 357
L++ D G + S + + P H ++SGS D +W +A
Sbjct: 310 RLWDPRSKD-GSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWDTRSCKAPLY 368
Query: 358 KLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
L +H+ +V V+W EAG +++ D
Sbjct: 369 DLAAHEDKVLCVDW--TEAGLLLSGGAD 394
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 71/305 (23%), Positives = 133/305 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ + + + ++S D+ IKIW A K + GH I + + ++S++L
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV-AWSSDSNLL 102
Query: 167 VSGSRDGSFAIWDL---RCKSSPK--SN---CAESFVFSSAVVKGAHLLS-------QSK 211
VS S D + IWD+ +C + K SN C S+ +V G+ S K
Sbjct: 103 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 162
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ A S +++V + +D S+ +S+ + + + WDT + Q + ++
Sbjct: 163 CLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPP--- 216
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC-RIESFYVKSEICP 330
+S + NG ++ A+ +D+ + L++ KG C + E + + +
Sbjct: 217 -----VSFVKFSPNGKYILAATLDNTLKLWDY---SKGKCLKTYTCHKNEKYCIFANFSV 268
Query: 331 NASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDY 386
I+SGS D Y+W + + KL+ H V + P E I+ S+ +D
Sbjct: 269 TGGKWIVSGSEDNLVYIWNLQTKEVVQ-KLQGHTDVVISTACHPTE--NIIASAALENDK 325
Query: 387 TVRLW 391
T++LW
Sbjct: 326 TIKLW 330
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 106 (42.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 43/164 (26%), Positives = 69/164 (42%)
Query: 32 VVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC 91
+V + I V V GEE P+A + + + +FA+ + + + + L +F
Sbjct: 145 MVPHYGGINRVRVSWLGEE--PVAGVWSEKGQ-VEVFALRR---LLQVVEEPQALAAFL- 197
Query: 92 HRENAEKARISDWVAHQNAIFDLCWIKEDTN-ILTASGDQTIKIW---DAEKKKCTGA-L 146
E A+ I + H F L W T +LT + I +W D
Sbjct: 198 RDEQAQMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 257
Query: 147 MGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNC 190
+GHT S++ L PT + + S S D S IWD+R ++P C
Sbjct: 258 VGHTRSVEDLQWSPTENTVFASCSADASIRIWDIR--AAPSKAC 299
Score = 98 (39.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 335 ILSGSSDGNAYVWQVNK-PQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSG DG +W + + P+ K H VT+V W P ++G S D+ + W
Sbjct: 323 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
Query: 393 L 393
L
Sbjct: 383 L 383
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 64/292 (21%), Positives = 125/292 (42%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D++IK+WD KC L GH G + +LC
Sbjct: 361 FVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGHDGIVLALC---IQ 417
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
+ L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 418 GNKLYSGSADCTIIVWDIQ--TLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 474
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWD-TRNLKAQITQAWPHAESSSAKETRLHGISSLS 281
+ + L LK E++ V ++V + + Q + W + G S S
Sbjct: 475 VGTELKLKKELT-GLNHWVRALVASQNHLYSGSYQTIKIWDIRSLECVHVLQTSGGSVYS 533
Query: 282 QDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC-PNASHILSGSS 340
+ ++ I+++++ K ++ +G + + Y + I P+ + + S S
Sbjct: 534 IAVTNHHIVCGTYENLIHVWDIES--KEQVRTLTG-HVGTVYALAVISTPDQTKVFSASY 590
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 591 DRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 638
Score = 142 (55.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 69/266 (25%), Positives = 121/266 (45%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAV 200
KC G +GH G + LC + T D+L SGS D S +WD C + C ++ +
Sbjct: 356 KCKGTFVGHQGPVWCLCVYSTG-DLLFSGSSDKSIKVWDT-CTTY---KCQKTLEGHDGI 410
Query: 201 VKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSI-ATASAVNSIVKFWD---TRNLKAQ 256
V A + +K S ++ + + L+ +I A + V ++V + + +LKA
Sbjct: 411 VL-ALCIQGNKLYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA- 468
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L N ++ S I ++++ L+ +
Sbjct: 469 -IKVWDIVGTELKLKKELTGLNHWVRALVASQNHLY---SGSYQTIKIWDIRSLECVHVL 524
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 525 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 576
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 577 ISTPDQT-KVFSASYDRSLRVWSMDN 601
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 159 (61.0 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 69/254 (27%), Positives = 109/254 (42%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + C+ + + T+SGD TIK+WD K +CT L GH ++ S C+ + D +
Sbjct: 401 HTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWS-CTWHSCGDFV 459
Query: 167 VSGSRDGSFAIWDL---RCK-----SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKA 218
S S D + IWD+ RC+ + N E F FS+ ++ S K +S A
Sbjct: 460 ASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTA----SADKTLSVWDA 515
Query: 219 ASMSITSVLY-LKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGI 277
+ LY V+ AT + I+ D R +T+ W + + G
Sbjct: 516 RTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARG----VTKLWDFRKLIPIVSIDV-GP 570
Query: 278 SSLSQ---DSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPN-AS 333
SS ++ D +G L + + I+L L L G I G E V S + +
Sbjct: 571 SSGNEVNFDQSGRVLAQASANGIIHL---LDLKSGQIHKLVGHESE---VHSVVFSHLGE 624
Query: 334 HILSGSSDGNAYVW 347
++ SG SDG +W
Sbjct: 625 NLYSGGSDGTIRLW 638
>POMBASE|SPBC32H8.07 [details] [associations]
symbol:git5 "heterotrimeric G protein beta subunit Git5"
species:4896 "Schizosaccharomyces pombe" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=TAS] [GO:0007190
"activation of adenylate cyclase activity" evidence=TAS]
[GO:0010619 "adenylate cyclase-activating glucose-activated
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0010972 "negative regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0030159 "receptor signaling complex scaffold
activity" evidence=IDA] [GO:0031138 "negative regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032092
"positive regulation of protein binding" evidence=IDA] [GO:0045014
"negative regulation of transcription by glucose" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 PomBase:SPBC32H8.07 GO:GO:0005829 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0032092 GO:GO:0019933 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190
GenomeReviews:CU329671_GR GO:GO:0030435 GO:GO:0004871 GO:GO:0030159
EMBL:AB004535 GO:GO:0045014 PRINTS:PR00319 GO:GO:0010972
GO:GO:0005834 HOGENOM:HOG000176356 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 KO:K07972 EMBL:L28061 EMBL:AF092102 PIR:S72457
PIR:T50474 RefSeq:NP_595613.1 ProteinModelPortal:Q10282
STRING:Q10282 EnsemblFungi:SPBC32H8.07.1 GeneID:2539974
KEGG:spo:SPBC32H8.07 OrthoDB:EOG454D7D NextBio:20801117
GO:GO:0010619 GO:GO:0031138 Uniprot:Q10282
Length = 305
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 64/214 (29%), Positives = 95/214 (44%)
Query: 105 VAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
V H + C +D ++LT SGD+T WD E+ K L GH I SL P+N +
Sbjct: 103 VGHAGFV-SCCKYVDDGHLLTGSGDKTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPN 161
Query: 165 ILVSGSRDGSFAIWDLR---CKSSPKSNCAE----SFVFSSA-VVKGAHL-------LSQ 209
+ V+G D +WDLR C ++ N ++ SF S+A V GA +
Sbjct: 162 LFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFFPSNADFVTGAEDGIARCFDIRA 221
Query: 210 SKRVSRRKAASMS-ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
S + + + S S I SVL+ K + A + + WD+ + K IT H
Sbjct: 222 SAEIFQYSSPSSSPINSVLFSKSGKLLFIAK--DKTCEVWDSISSKT-ITSLTGH----- 273
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYN 302
E R ISSL+ S+G L D + L++
Sbjct: 274 --ENR---ISSLALTSDGTMLATGSWDECVRLWS 302
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 111 (44.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 28/121 (23%), Positives = 50/121 (41%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ DG + L+D+ + ++E+ ++ DW Q +++
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW--SQT--------RDE 120
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD GH I S P S S D + IWD+
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 181 R 181
+
Sbjct: 181 K 181
Score = 109 (43.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 27/83 (32%), Positives = 40/83 (48%)
Query: 107 HQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSL--CSHPTNS 163
H++ I+ W +ASGDQT++IWD + + H I S C + N
Sbjct: 149 HESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIVIPAHQAEILSCDWCKY--NE 206
Query: 164 DILVSGSRDGSFAIWDLRCKSSP 186
++LV+G+ D S WDLR P
Sbjct: 207 NLLVTGAVDCSLRGWDLRNVRQP 229
Score = 87 (35.7 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 168 SASGDQTLRIWDV-KTTGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN 225
Score = 72 (30.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 205 NENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 264
Query: 391 WS 392
W+
Sbjct: 265 WN 266
Score = 46 (21.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTA-VNWCPNEAGKIVTSSDDYTV 388
+AS + S S D W +KP DP+ + H E T ++ ++ S D TV
Sbjct: 249 HASVLASCSYDFTVRFWNFSKP--DPLLETVEHHTEFTCGLDLSLQSPTEVADCSWDETV 306
Query: 389 RLWS 392
++++
Sbjct: 307 KIYN 310
>UNIPROTKB|G1T1P7 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9986
"Oryctolagus cuniculus" [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=ISS] [GO:0001947 "heart looping" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0005814
"centriole" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005912 "adherens junction" evidence=ISS]
[GO:0005929 "cilium" evidence=ISS] [GO:0005932 "microtubule basal
body" evidence=ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0007417
"central nervous system development" evidence=ISS] [GO:0010842
"retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0042384
GO:GO:0035844 GO:GO:0001947 GO:GO:0030902 GO:GO:0070121
GO:GO:0070986 GO:GO:0001738 GO:GO:0071599 GO:GO:0035845
GO:GO:0030862 GO:GO:0002092 GO:GO:0039023 GO:GO:0039008
GO:GO:0010842 GO:GO:0065001 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:AAGW02028691 EMBL:AAGW02028692
EMBL:AAGW02028693 EMBL:AAGW02028694 Ensembl:ENSOCUT00000011648
Uniprot:G1T1P7
Length = 1098
Score = 136 (52.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 48/160 (30%), Positives = 73/160 (45%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 553 FCLDFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 599
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D ILT+S D T +IW E T ++ H + + HP +++V+G D
Sbjct: 600 LCWSTDDRYILTSSSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPATRELVVTGCYD 659
Query: 173 GSFAIW--DLRCKSS---PKSNCAESFVFSSAV-VKGAHL 206
IW D+R S+ + + +SF+ S +G H+
Sbjct: 660 SMIRIWKIDMREDSAILVRQVDAHKSFINSLCFDTEGHHM 699
Score = 75 (31.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 33/128 (25%), Positives = 50/128 (39%)
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SS 279
I S+ + + + T IV WDT + + H A + KET GI S
Sbjct: 687 INSLCFDTEGHHMYTGDCTGMIV-VWDTYVKVNDLQHSVRHWAINKEIKETEFKGIPISY 745
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGS 339
L NG L D + + ++ L + F G + S + P + + +GS
Sbjct: 746 LEVHPNGKRLLIHTKDSTLRIMDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGS 802
Query: 340 SDGNAYVW 347
DG YVW
Sbjct: 803 EDGIVYVW 810
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 127 (49.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 34/93 (36%), Positives = 46/93 (49%)
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS 170
I +C+ + + T + D+ I+IWD E +K L GH I SL P+ D LVSGS
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGS 504
Query: 171 RDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKG 203
D + IWDLR + E V + AV G
Sbjct: 505 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPG 537
Score = 104 (41.7 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 19/73 (26%), Positives = 38/73 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ I+ L + +++ SGD+T++IWD +C+ L G + ++ P + +
Sbjct: 484 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDG-VTTVAVSPGDGKYI 542
Query: 167 VSGSRDGSFAIWD 179
+GS D + +WD
Sbjct: 543 AAGSLDRAVRVWD 555
Score = 80 (33.2 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQ 282
+T+V + A +++ V+ WD+ + + ES + + ++ + ++
Sbjct: 529 VTTVAVSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVV-FTR 586
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGPIQHF--SG-CRI-----ESFYVKSEICPNASH 334
D V + +D + L+N+ + SG C + + F + N +
Sbjct: 587 DGQSV--VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 644
Query: 335 ILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAV---NWCP--NEAGKIVTSSDDYTV 388
ILSGS D W +K +P+ L+ H V +V N P E T S D
Sbjct: 645 ILSGSKDRGVLFW--DKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKA 702
Query: 389 RLW 391
R+W
Sbjct: 703 RIW 705
Score = 74 (31.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 31/137 (22%), Positives = 61/137 (44%)
Query: 222 SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRL-HG--IS 278
S+ SV++ +D S+ + S S VK W+ +N + P+ S + + T + H +
Sbjct: 578 SVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANNKSDSKTPN--SGTCEVTYIGHKDFVL 634
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCR--IESFYVK--SEICPNASH 334
S++ N ++ + D + ++ + P+ G R + S V S + P +
Sbjct: 635 SVATTQNDEYILSGSKDRGVLFWD--KKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNV 692
Query: 335 ILSGSSDGNAYVWQVNK 351
+GS D A +W+ K
Sbjct: 693 FATGSGDCKARIWKYKK 709
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 72/299 (24%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 392 FVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCR 451
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H L S + K +
Sbjct: 452 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDI- 505
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 506 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 555
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 614
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 615 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 669
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 65/265 (24%), Positives = 119/265 (44%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + D+L SGS D + +WD C + E + +
Sbjct: 387 KCKGTFVGHQGPVWCLCVYSVG-DLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 444
Query: 199 AVVKGAHLLSQSKRVSRRKAASMSITSVLYLK-DEVSIATASAVNSIVKFWDTRNLKAQI 257
++G L S S + ++ V ++ + + T + ++++ F + +LKA
Sbjct: 445 LCIQGCRLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLL-F--SGSLKA-- 499
Query: 258 TQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH 313
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 500 IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVLQ 556
Query: 314 FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAVN 370
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 557 TSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAVI 608
Query: 371 WCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 609 STPDQT-KVFSASYDRSLRVWSMDN 632
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 111 (44.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/121 (24%), Positives = 49/121 (40%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ DG + L+D+ R +E+ ++ DW Q + +
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTARATGPLQVFKEHTQEVYSVDW--SQT--------RGE 125
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD K GH I S P S S D + IWD+
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDV 185
Query: 181 R 181
+
Sbjct: 186 K 186
Score = 87 (35.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 173 SSSGDQTLRIWDV-KTTGVRIVVPAHQAEILSCDWCKYNENLVVTGAVDCSLRGWDLRN 230
Score = 77 (32.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + Q +L H + V + P A + + S D+TVR
Sbjct: 210 NENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 269
Query: 391 WS 392
W+
Sbjct: 270 WN 271
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 148 (57.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 107 HQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +A+ DL W K N+L +AS D T+ +WD K +L HT +++L HP +
Sbjct: 254 HTDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 313
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSN 189
L+SGS D S A++D C+S +S+
Sbjct: 314 LISGSYDKSVALYD--CRSPEESH 335
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 31 DVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRR 84
D D E+ ++ + EE P A + ++ ++ +D+D YV+L D+ +
Sbjct: 83 DRTLDDDELAEYDLDKYDEEGDPDAETLGESLLGLTVYGSNDQDPYVTLKDTEQ 136
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 155 (59.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+NAI DL W + + I++AS D+T++ WD E K + H+ + S C ++
Sbjct: 95 HKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLI 154
Query: 167 VSGSRDGSFAIWDLR 181
+SGS DG+ +WD+R
Sbjct: 155 ISGSDDGTAKLWDMR 169
Score = 117 (46.2 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 35/138 (25%), Positives = 60/138 (43%)
Query: 57 SFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCW 116
S C T + + +DG L+D R++ + +K +I+ V+ +A
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAKLWDMRQR----GAIQTFPDKYQITA-VSFSDAA----- 192
Query: 117 IKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFA 176
I T D +K+WD K + T L GH +I + P S +L +G D
Sbjct: 193 ----DKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM-DNKLC 247
Query: 177 IWDLRCKSSPKSNCAESF 194
+WD+R +P++ C + F
Sbjct: 248 VWDMR-PYAPQNRCVKIF 264
Score = 39 (18.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 237 TASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG----ISSLSQDSNGVFL 289
TA + + +V WDT + + I + H + S E H I S S D N ++L
Sbjct: 288 TAGSSDRMVHIWDTTSRRT-IYKLPGH--TGSVNECVFHPTEPIIGSCSSDKN-IYL 340
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 78/311 (25%), Positives = 136/311 (43%)
Query: 104 WVAHQNAI-----FDLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC 157
W H +I DLC DTN ILT D+ + ++D ++ L GH+ + S+
Sbjct: 215 WGLHSASIPGILALDLC--PSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVV 272
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAE-------SFVFSSAVVKGAHLLSQS 210
HP+ D++ S S D + IW S P ++C + S S G +LLS S
Sbjct: 273 FHPSQ-DLVFSASPDATIRIW-----SVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSS 326
Query: 211 KRVSRRKAASMSITSVLYLK--DEVS--IATASAVNSIVKFWDTRNLKAQITQAWPHAES 266
+ A S T + K DE S T + + + T + +QI + W E
Sbjct: 327 D--DQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQI-KIWDLKER 383
Query: 267 SSAKETRLHG--ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIES-FY 323
++ H I+S++ NG +L + D + L+++ +L ++F ++++ F
Sbjct: 384 TNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKL-----KNFKTLQLDNNFE 438
Query: 324 VKSEICPNASHILS-GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
VKS I + L+ G +D Y+ K + + H G T V + + A I ++
Sbjct: 439 VKSLIFDQSGTYLALGGTDVQIYIC---KQWTEILHFTEHSGLTTGVAF-GHHAKFIAST 494
Query: 383 SDDYTVRLWSL 393
D +++ +SL
Sbjct: 495 GMDRSLKFYSL 505
Score = 131 (51.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 69/272 (25%), Positives = 113/272 (41%)
Query: 47 HGEETPP-LAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWV 105
H P LA+ C + N + +D++ V +FD + A + +++K ++ V
Sbjct: 218 HSASIPGILALDLCPSDTNKILTGGADKN--VIVFDKSSE-QILATLKGHSKK--VTSVV 272
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H + DL + +AS D TI+IW C + H GS+ L H T D
Sbjct: 273 FHPSQ--DL--------VFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATG-DY 321
Query: 166 LVSGSRDGSFAIWDLRCK------SSPKSNCA--------ESFVFSSAVVKGAHL---LS 208
L+S S D +A D++ + S CA + +F + + L
Sbjct: 322 LLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLK 381
Query: 209 QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
+ V+ S ITS+ + ++ +ATA A +S VK WD R LK T + +
Sbjct: 382 ERTNVANFPGHSGPITSIAFSENGYYLATA-ADDSSVKLWDLRKLKNFKT-----LQLDN 435
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYL 300
E + SL D +G +L D +IY+
Sbjct: 436 NFE-----VKSLIFDQSGTYLALGGTDVQIYI 462
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 148 (57.2 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 107 HQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +A+ DL W K N+L +AS D T+ +WD K +L HT +++L HP +
Sbjct: 255 HTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQT 314
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSN 189
L+SGS D S A++D C+S +S+
Sbjct: 315 LISGSYDKSVALYD--CRSPDESH 336
Score = 53 (23.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 31 DVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRR 84
D D E+ ++ + EE P A + ++ ++ +D+D YV+L D+ +
Sbjct: 84 DRTLDDDELAEYDLDKYDEEGDPDAETLGESLLGLTVYGSNDQDPYVTLKDTEQ 137
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 57/211 (27%), Positives = 86/211 (40%)
Query: 55 AVSFCKTS-KNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
AV+ K K+S + ED V+L+ A + NA I H + I
Sbjct: 18 AVNCLKIGRKSSRVLVTGGEDHKVNLW---------AIGKPNA----ILSLYGHSSGIDS 64
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDG 173
+ + + + + TIK+WD E+ K L GH + S+ HP + SGS D
Sbjct: 65 VTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG-EFFASGSLDT 123
Query: 174 SFAIWDLR---CKSSPKSNCAESFVFSSA-----VVKGAHL-------LSQSKRVSRRKA 218
+ IWD+R C + K + V VV G L+ K ++ K+
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 219 ASMSITSVLYLKDEVSIATASAVNSIVKFWD 249
I S+ + E +AT SA + VKFWD
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSA-DRTVKFWD 213
Score = 112 (44.5 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 261 WPHAESSSAKETRLHGISSLSQDSN--GVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCR 318
W E+ + H + +S D + G F + +D + ++++ + KG I + G
Sbjct: 86 WDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKG-H 142
Query: 319 IESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK 378
V P+ ++SG D VW + + + KSH+G++ ++++ P+E
Sbjct: 143 TRGVNVL-RFTPDGRWVVSGGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHPHEF-L 199
Query: 379 IVTSSDDYTVRLWSLE 394
+ T S D TV+ W LE
Sbjct: 200 LATGSADRTVKFWDLE 215
Score = 97 (39.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKCTGALMGHTGSIKSLCS 158
++ ++VAH A+ L ++ + +L G D + +W K +L GH+ I S+
Sbjct: 8 KLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF 67
Query: 159 HPTNSDILVS-GSRDGSFAIWDL------RCKSSPKSNC 190
S++LV+ G+ G+ +WDL R + +SNC
Sbjct: 68 DA--SEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC 104
>UNIPROTKB|G3TIV3 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9785
"Loxodonta africana" [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=ISS] [GO:0001947 "heart looping" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0005814
"centriole" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005912 "adherens junction" evidence=ISS]
[GO:0005929 "cilium" evidence=ISS] [GO:0005932 "microtubule basal
body" evidence=ISS] [GO:0007169 "transmembrane receptor protein
tyrosine kinase signaling pathway" evidence=ISS] [GO:0007417
"central nervous system development" evidence=ISS] [GO:0010842
"retina layer formation" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0030902 "hindbrain development" evidence=ISS]
[GO:0031513 "nonmotile primary cilium" evidence=ISS] [GO:0034613
"cellular protein localization" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0035845 "photoreceptor cell outer
segment organization" evidence=ISS] [GO:0039008 "pronephric nephron
tubule morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043066 GO:GO:0034613 GO:GO:0005814 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795 GO:GO:0045944
GO:GO:0005911 GO:GO:0007169 GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS
GO:GO:0005932 GO:GO:0042384 GO:GO:0035844 GO:GO:0001947
GO:GO:0030902 GO:GO:0070121 GO:GO:0070986 GO:GO:0001738
GO:GO:0071599 GO:GO:0035845 GO:GO:0030862 GO:GO:0002092
GO:GO:0039023 GO:GO:0039008 GO:GO:0010842 GO:GO:0065001
GO:GO:0031513 GeneTree:ENSGT00530000063479
Ensembl:ENSLAFT00000017410 Uniprot:G3TIV3
Length = 853
Score = 144 (55.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 42/134 (31%), Positives = 60/134 (44%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 468 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 514
Query: 114 LCWIKEDTNILTASGDQTIKIWDAE-KKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D ILTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 515 LCWSNDDRYILTASSDGTARIWKNEINNTSTFRVLPHPSFVYTAKFHPAVKELVVTGCYD 574
Query: 173 GSFAIWDLRCKSSP 186
IW + + P
Sbjct: 575 SMIRIWKVDMREEP 588
Score = 63 (27.2 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 24/107 (22%), Positives = 43/107 (40%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
++ W+T + + H + + KE+ GI S + NG L D + +
Sbjct: 622 VIVVWNTYVKVNDVQHSVRHWSVNKEIKESEFKGIPISYMEVHPNGKRLLIHTKDSTLRI 681
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS DG YVW
Sbjct: 682 MDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVW 725
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 82/300 (27%), Positives = 128/300 (42%)
Query: 120 DTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
D N+L +AS D+T+ +W A GH+ I L + ++S S S D + IW
Sbjct: 54 DGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL-AWSSDSHYTCSASDDCTLRIW 112
Query: 179 DLR----CKSSPKSNCAESFVF-------SSAVVKGAH-------LLSQSKRVSRRKAAS 220
D R C + + +FVF S+ +V G+ + K V KA S
Sbjct: 113 DARSPYECLKVLRGHT--NFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 221 MSITSVLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGI 277
M I+SV + +D I +AS S K WD + LK I P +
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSC-KIWDAKEGTCLKTLIDDKSP-------------AV 216
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEIC-PNASHI 335
S NG F+ + +D + L N G ++ ++G + F + S N +I
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLSNYAT---GKFLKVYTGHTNKVFCITSAFSVTNGKYI 273
Query: 336 LSGSSDGNAYVWQVNKPQADPI--KLKSHDGEVTAVNWCPNEAGKIVTSSD--DYTVRLW 391
+SGS D Y+W + QA I +L+ H V +V+ C +I +S + D T+R+W
Sbjct: 274 VSGSEDNCVYLWDL---QARNILQRLEGHTDAVISVS-CHPVQNEISSSGNHLDKTIRIW 329
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 62/249 (24%), Positives = 111/249 (44%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-KCTGALMGHTGSIKSLCSH 159
I + H + I DL W + +AS D T++IWDA +C L GHT + + +
Sbjct: 78 IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVK--GAHLLSQSKRVSRRK 217
P S+++VSGS D + IW+++ + A S SS G+ ++S S S +
Sbjct: 138 PP-SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 218 AASMSITSVLYLKDEVSIATASAVNS------IVKFWDTRNLKAQITQAWPHAESSSAKE 271
+ T + L D+ S A + A S +V D+ LK + +
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDS-TLKLSNYATGKFLKVYTGHT 255
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG-----CRIESFYVKS 326
++ I+S +NG ++ + D+ +YL++ LQ + +Q G + V++
Sbjct: 256 NKVFCITSAFSVTNGKYIVSGSEDNCVYLWD-LQA-RNILQRLEGHTDAVISVSCHPVQN 313
Query: 327 EICPNASHI 335
EI + +H+
Sbjct: 314 EISSSGNHL 322
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 153 (58.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 68/259 (26%), Positives = 107/259 (41%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H+ I D+ W ++ I +AS D+TIKIWD E K L GH + + +P S+++
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP-QSNLI 145
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRV-SRRKAASMSI-- 223
VSGS D + IWD+ C + S V G H V S ++ I
Sbjct: 146 VSGSFDENVRIWDVNT-----GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWD 200
Query: 224 TSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQIT-----QAWPHAESSSAKET------ 272
T+ L + +S V S VKF T + W + + +T
Sbjct: 201 TTTGQLLNTISTEDGKEV-SFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKN 259
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC-PN 331
+ I S + G ++ D+ IY+YN LQ + +Q +G V + C P
Sbjct: 260 EKYCIFSTFSVTCGKWIVTGSEDNLIYIYN-LQT-REIVQTLAG---HEDVVLTVACHPT 314
Query: 332 ASHILSGS--SDGNAYVWQ 348
+ I SG+ D + +W+
Sbjct: 315 ENIIASGALEKDRSVKIWK 333
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 69/304 (22%), Positives = 128/304 (42%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +I + + + + +AS D+TIKIW A K L GH I + + +S ++
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI-AWSQDSKLI 103
Query: 167 VSGSRDGSFAIWDLRCKSSPKS-NCAESFVF-------SSAVVKGAHL-------LSQSK 211
S S D + IWD+ K+ + +VF S+ +V G+ ++ +
Sbjct: 104 CSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGE 163
Query: 212 RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKE 271
A S +T V + +D + + S + V+ WDT Q+ + KE
Sbjct: 164 CTKMISAHSDPVTGVHFNRDGTLVVSGS-YDGTVRIWDTTT--GQLLNT---ISTEDGKE 217
Query: 272 TRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPN 331
+S + NG F+ A +D+ + L++ +K ++ ++G + E + + S
Sbjct: 218 -----VSFVKFSPNGKFVLAGTLDNTLRLWSYNN-NKKCLKTYTGHKNEKYCIFSTFSVT 271
Query: 332 ASH-ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYT 387
I++GS D Y++ + + L H+ V V P E I+ S D +
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQT-LAGHEDVVLTVACHPTE--NIIASGALEKDRS 328
Query: 388 VRLW 391
V++W
Sbjct: 329 VKIW 332
>UNIPROTKB|E2QZ03 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0005912 "adherens junction" evidence=ISS] [GO:0005911
"cell-cell junction" evidence=ISS] [GO:0005813 "centrosome"
evidence=ISS] [GO:0031513 "nonmotile primary cilium" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0005929
"cilium" evidence=ISS] [GO:0005814 "centriole" evidence=ISS]
[GO:0060271 "cilium morphogenesis" evidence=ISS] [GO:0050795
"regulation of behavior" evidence=ISS] [GO:0034613 "cellular
protein localization" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0007169 "transmembrane receptor
protein tyrosine kinase signaling pathway" evidence=ISS]
[GO:0002092 "positive regulation of receptor internalization"
evidence=ISS] [GO:0070986 "left/right axis specification"
evidence=ISS] [GO:0070121 "Kupffer's vesicle development"
evidence=ISS] [GO:0039023 "pronephric duct morphogenesis"
evidence=ISS] [GO:0035844 "cloaca development" evidence=ISS]
[GO:0001947 "heart looping" evidence=ISS] [GO:0071599 "otic vesicle
development" evidence=ISS] [GO:0065001 "specification of axis
polarity" evidence=ISS] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0039008 "pronephric nephron tubule morphogenesis" evidence=ISS]
[GO:0030902 "hindbrain development" evidence=ISS] [GO:0030862
"positive regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0007417 "central nervous system development" evidence=ISS]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0043066 GO:GO:0034613 GO:GO:0005814 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795 GO:GO:0045944
GO:GO:0005911 GO:GO:0007169 GO:GO:0005912 GO:GO:0005932
GO:GO:0042384 GO:GO:0035844 GO:GO:0001947 GO:GO:0030902
GO:GO:0070121 GO:GO:0070986 GO:GO:0001738 GO:GO:0071599
GO:GO:0035845 GO:GO:0030862 GO:GO:0002092 GO:GO:0039023
GO:GO:0039008 GO:GO:0010842 GO:GO:0065001 GO:GO:0031513
Ensembl:ENSCAFT00000000373 Uniprot:E2QZ03
Length = 867
Score = 142 (55.0 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 476 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 522
Query: 114 LCWIKEDTNILTASGDQTIKIWDAE-KKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D ILTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 523 LCWSNDDRYILTASSDGTARIWKNEINNSNTFRVLPHPSFVYTAKFHPAVKELVVTGCYD 582
Query: 173 GSFAIWDLRCKSSP 186
+W + + +P
Sbjct: 583 SVIRVWKVDMRENP 596
Score = 65 (27.9 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 25/107 (23%), Positives = 43/107 (40%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
++ W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 631 VIVVWNTYVKVNDVKHSVRHWSVNKEIKESEFKGIPISYLEVHPNGKRLLIHTKDSTLRI 690
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS DG YVW
Sbjct: 691 MDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDGIVYVW 734
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 161 (61.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 72/289 (24%), Positives = 126/289 (43%)
Query: 121 TNILTASG-DQTIKIWDAEKKKCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAI 177
+ +L G D+ +K+W+ KC G+L G I S+ + L++ S D + I
Sbjct: 350 SRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSI-EFDSAGSYLLAASNDFASRI 408
Query: 178 W---DLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVS 234
W D R + + + S V+ LL ++ VS ++ + L+ +V
Sbjct: 409 WTVDDYRLRHTLTGH-------SGKVLSAKFLLDNARIVSGSHDRTLKLWD---LRSKVC 458
Query: 235 IATA---SAVNSIV---KFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGV 287
I T S+ N IV + + + +I + W S +E L G I++L +
Sbjct: 459 IKTVFAGSSCNDIVCTEQCVMSGHFDKKI-RFWDIRSESIVREMELLGKITALDLNPERT 517
Query: 288 FLTASCMDHRIYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNA 344
L SC R L ++ L + Q FS G + S + ++ P+ S++ +G+++G+
Sbjct: 518 ELL-SCS--RDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSL 574
Query: 345 YVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDYTVRLWS 392
Y+W V + + + K H + AV W P AG +VT LWS
Sbjct: 575 YIWNVLSGKVEKVLSKHHSSSINAVAWSP--AGSHVVTVDKGSKAVLWS 621
Score = 41 (19.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 22/91 (24%), Positives = 36/91 (39%)
Query: 22 KARKRPYFGDVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFD 81
+A K P + D + T EH E +P A+S T + S A D ++F
Sbjct: 226 EAAKEPLPVEQDDDIEVLVDETSEHPEETSPVRAISRAATKRLSQP-AGGLLDSITNIFG 284
Query: 82 SRRKLPSFACHRENAEKAR-ISDWVAHQNAI 111
P H +A + R +S + Q+ +
Sbjct: 285 LSES-PLLGHHSSDAARRRSVSSFPVPQDNV 314
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 156 (60.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 71/297 (23%), Positives = 135/297 (45%)
Query: 113 DLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
DLC DTN +LT D+ + ++D +++ L GHT + S+ HP + ++ S S
Sbjct: 229 DLC--PTDTNKVLTGGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQA-VVFSASS 285
Query: 172 DGSFAIWDL---RCKSSPKSNCAESFVFSSAV-VKGAHLLSQSKRVSRRKAASMSITSVL 227
D + +W + C +++ ES V ++ G +LLS S+ + A S T +
Sbjct: 286 DSTIRVWSVTGGNCVQVVRAH--ESAVTGLSLHATGDYLLSSSE--DQYWAFSDIQTGRV 341
Query: 228 YLKDEVSIATASAVNSIVKF------WDTRNLKAQITQAWPHAESSSAKETRLHG--ISS 279
K V+ TA + +F + T +QI + W E ++ H +++
Sbjct: 342 LTK--VTDETAGCALTCAQFHPDGLIFGTGTGDSQI-KIWDLKERTNVANFPGHSGPVTA 398
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY-VKSEICPNASHILS- 337
++ NG +L D + L+++ +L ++F +++ Y VKS + + L+
Sbjct: 399 IAFSENGYYLATGAQDSSLKLWDLRKL-----KNFKTITLDNNYEVKSLVFDQSGTYLAV 453
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD-DYTVRLWSL 393
G SD Y+ K ++ + H G VT V + E + + S+ D +++ +SL
Sbjct: 454 GGSDIRVYIC---KQWSEVLNFSDHSGLVTGVAF--GEHAQFLASTGMDRSLKFYSL 505
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 56/285 (19%), Positives = 112/285 (39%)
Query: 33 VTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACH 92
++ + ++G+ H L++ C T N + +D++ V +FD R
Sbjct: 205 LSKYRQVGSHAGLHSASVPGILSLDLCPTDTNKVLTGGADKN--VVVFDRR--------- 253
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
E+ ++ H + + + + +AS D TI++W C + H +
Sbjct: 254 ----EEQIVATLKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNCVQVVRAHESA 309
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLRCK------SSPKSNCA--------ESFVFSS 198
+ L H T D L+S S D +A D++ + + CA + +F +
Sbjct: 310 VTGLSLHATG-DYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGT 368
Query: 199 AVVKGAHL---LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKA 255
L + V+ S +T++ + ++ +AT A +S +K WD R LK
Sbjct: 369 GTGDSQIKIWDLKERTNVANFPGHSGPVTAIAFSENGYYLATG-AQDSSLKLWDLRKLK- 426
Query: 256 QITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL 300
+ ++ + + + SL D +G +L D R+Y+
Sbjct: 427 -------NFKTITLDNN--YEVKSLVFDQSGTYLAVGGSDIRVYI 462
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 156 (60.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 70/287 (24%), Positives = 130/287 (45%)
Query: 119 EDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+ + ILT D+ +++ + ++ L GHT I + HP N D +++GS D + IW
Sbjct: 234 DHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHP-NEDTVITGSPDMNIRIW 292
Query: 179 DLRCKSSPKS-NCAESFVFSSAV-VKGAHLLSQSKRVSRRKAASMSITSVLYLK--D--E 232
+ + C E V ++ G +LLS S + A S T L K D E
Sbjct: 293 HVPTSQTQLLLRCHEGPVTGLSLHPTGDYLLSTSS--DKHWAFSDIRTGRLLTKVIDTAE 350
Query: 233 VSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLH-G-ISSLSQDSNGVFLT 290
V + TA + F T + +Q+ + W E S+ H G IS++S NG +L
Sbjct: 351 VGLTTAQFHPDGLIF-GTGTVDSQV-KIWDLKEQSNVANFPGHTGPISAISFSENGYYLA 408
Query: 291 ASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC--PNASHILSGSSDGNAYVWQ 348
+ D + L+++ +L ++F +++ Y ++C + +++ SD Y+ +
Sbjct: 409 TAADDACVKLWDLRKL-----KNFKTIQLDDGYEVKDLCFDQSGTYLAIAGSDVRVYLCK 463
Query: 349 VNKPQADPIKL-KSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
Q +K+ H T V + A + ++S D T++L+++E
Sbjct: 464 ----QWQELKVFNDHTALATGVRF-GKHAQYLASTSMDRTLKLYAIE 505
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 157 (60.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 71/299 (23%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 316 FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCK 375
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 376 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 429
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 430 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 479
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 480 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 538
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 539 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 593
Score = 128 (50.1 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 65/266 (24%), Positives = 115/266 (43%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + + D+L SGS D + +WD C + E + +
Sbjct: 311 KCKGTFVGHQGPVWCLCVY-SMGDLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 368
Query: 199 AVVKGAHLLSQSK--RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQ 256
++G L S S + ++ + + D S+ N + + +LKA
Sbjct: 369 LCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLF----SGSLKA- 423
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 424 -IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVL 479
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 480 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 531
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 532 ISTPDQT-KVFSASYDRSLRVWSMDN 556
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 147 (56.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 69 AVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL---T 125
A S +D Y++ +K+ + ++ + + H + + C +N L T
Sbjct: 664 AFSSDDSYIATCSVDKKVKIW----DSGTGKLVHTYEEHSEQV-NCCHFTNKSNHLLLAT 718
Query: 126 ASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSS 185
S D +K+WD +K+C + GHT S+ C + ++L S S DG+ +WD+R +
Sbjct: 719 GSNDSFLKLWDLNQKECRNTMFGHTNSVTH-CRFSPDDELLASCSADGTLKLWDVRSANE 777
Query: 186 PKSNCAESFVFSS 198
KS + F SS
Sbjct: 778 KKSINVKRFFLSS 790
Score = 115 (45.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
E EK + D AH++ + + +D+ I T S D+ +KIWD+ K H+ +
Sbjct: 645 ETGEK--LLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQV 702
Query: 154 KSLCSHPTNSD---ILVSGSRDGSFAIWDLRCK 183
C H TN +L +GS D +WDL K
Sbjct: 703 N--CCHFTNKSNHLLLATGSNDSFLKLWDLNQK 733
Score = 63 (27.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 23/102 (22%), Positives = 46/102 (45%)
Query: 295 DHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
D + ++NV+ G I+ C + + I +A+ S S+D A +W P
Sbjct: 1064 DGTVKVWNVIT---GRIERDFTCH-QGTVLSCAISSDATKFSSTSADKTAKIWSFELPS- 1118
Query: 355 DPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
P+ +LK H+ V + + + T D+ +R+W++ +
Sbjct: 1119 -PLHELKGHNSCVRCSAFSLDGI-LLATGDDNGEIRIWNVSD 1158
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 71/299 (23%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 351 FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCK 410
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 411 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 464
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 465 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 514
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 515 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 573
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 574 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 628
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 65/266 (24%), Positives = 115/266 (43%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + + D+L SGS D + +WD C + E + +
Sbjct: 346 KCKGTFVGHQGPVWCLCVY-SMGDLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 403
Query: 199 AVVKGAHLLSQSK--RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQ 256
++G L S S + ++ + + D S+ N + + +LKA
Sbjct: 404 LCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLF----SGSLKA- 458
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 459 -IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVL 514
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 515 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 566
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 567 ISTPDQT-KVFSASYDRSLRVWSMDN 591
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 132 (51.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
R+S + C +D I+T+SGD T +WD E + T GH+G + SL
Sbjct: 134 RVSRELPGHTGYLSCCRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLS 193
Query: 160 PTNSDILVSGSRDGSFAIWDLR---CKSS 185
P + VSG+ D S +WD+R C+ S
Sbjct: 194 P-DLKTFVSGACDASSKLWDIRDGMCRQS 221
Score = 63 (27.2 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+L+G D N VW K + L HD V+ + ++ + T S D +R+W+
Sbjct: 285 LLAGYDDFNCSVWDALKGGRSGV-LAGHDNRVSCLG-VTDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 141 (54.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 36/133 (27%), Positives = 64/133 (48%)
Query: 69 AVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL---T 125
A S +D +++ +K+ + + E RI D H + + C ++N L T
Sbjct: 666 AFSADDKFIATCSVDKKVKIW--NSMTGELVRIYD--EHSEQV-NCCHFTNNSNHLLLAT 720
Query: 126 ASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSS 185
S D +K+WD +++C + GHT S+ S C + +L S S DG+ +WD++ +
Sbjct: 721 GSNDYFLKLWDLNQEECRNTMFGHTNSV-SHCRFSPDDQVLASCSADGTLKLWDVKSANE 779
Query: 186 PKSNCAESFVFSS 198
KS + F +S
Sbjct: 780 RKSINVKQFFLNS 792
Score = 69 (29.3 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 327 EICPNASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
+I +A+ S S+D A +W P+ +L+ H G V ++ N + T D+
Sbjct: 1094 DISSDATKFSSTSADKTAKIWSFEL--LSPLHELRGHKGCVRCSSFSVNNT-LLATGDDN 1150
Query: 386 YTVRLWSLEN 395
+R+W++ N
Sbjct: 1151 GEIRIWNVSN 1160
Score = 59 (25.8 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEA-GK-IVTSSDD 385
+ P+ ++ G DG + ++ + +S +G T V A GK +++SSDD
Sbjct: 971 LSPHLQYLAFGGEDGAIQILELLNNRI----FQSRNGHKTTVRHIQFTADGKTLISSSDD 1026
Query: 386 YTVRLWSLEN 395
V++W+ ++
Sbjct: 1027 SAVQIWNWQS 1036
Score = 56 (24.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGC-RIESFYVKSEICPNASHILSG 338
+S D+ T++ +I+ + +L ++ GC R SF V + + + +G
Sbjct: 1095 ISSDATKFSSTSADKTAKIWSFELLS-PLHELRGHKGCVRCSSFSVNNTL------LATG 1147
Query: 339 SSDGNAYVWQVNKPQ----ADPIKLK----SHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
+G +W V+ + PI ++ +H G VT + + P+ K++ S+ Y ++
Sbjct: 1148 DDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDT--KMLVSAGGY-LKW 1204
Query: 391 WSL 393
W++
Sbjct: 1205 WNV 1207
Score = 50 (22.7 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 362 HDGEVTAVNWC---PNEAGKIVTSSDDYTVRLWSLEN 395
H G +AV +C P+ +V S Y V LWS+++
Sbjct: 838 HMGHHSAVQYCDFSPHNHLAVVALSQ-YCVELWSMDS 873
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 105 (42.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC 157
K +SD H+ I ++ W + +AS D T IW K +CT L GH +KS+
Sbjct: 51 KTILSD--GHKRTIREVRWSPCGEYLASASFDATTAIWS--KHECTATLEGHENEVKSV- 105
Query: 158 SHPTNSDILVSGSRDGSFAIWDL 180
S + +L + SRD S IW++
Sbjct: 106 SWSRSGGLLATCSRDKSVWIWEV 128
Score = 92 (37.4 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+H+ +V AV W P AG++++ SDD T+++W L+
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQ 330
Score = 77 (32.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-----KCTGALMGHTGSIKSLCSHP 160
AH + + W + +AS D TIK++ AE CT L HT ++ S+
Sbjct: 142 AHSQDVKRVVWHPTKEVLASASYDNTIKMF-AESALDSDWDCTATLSSHTSTVWSI-DFD 199
Query: 161 TNSDILVSGSRDGSFAIW 178
+ + LVS S D + IW
Sbjct: 200 ADGERLVSCSDDATLKIW 217
Score = 74 (31.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM---GHTGSIKSLCSHPTNS 163
H+ I+ + W + + + D+ I+IW T + GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCG- 71
Query: 164 DILVSGSRDGSFAIWDLR-CKSSPKSNCAESFVFSSAVVKGAHLLSQSKR 212
+ L S S D + AIW C ++ + + E+ V S + + LL+ R
Sbjct: 72 EYLASASFDATTAIWSKHECTATLEGH--ENEVKSVSWSRSGGLLATCSR 119
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 126 (49.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 43/171 (25%), Positives = 80/171 (46%)
Query: 95 NAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIK 154
N ++A++ H++ + + + +I++ S D++ IWD EKK+ L GHTG I
Sbjct: 413 NTKRAQVLR--GHEDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVIS 470
Query: 155 --SLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKR 212
+L P+ S ++ S D + +W + S+ S+ + + K + + +
Sbjct: 471 CVALPKKPSTSMFAITASDDRTIKLW--KGFSTTSSSGGDD-----SKKKDKKISASVTK 523
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPH 263
++ K I S+ ++ ATAS +S VK W+ NL+ IT H
Sbjct: 524 IAHEK----DINSISIAPNDKIFATASQ-DSYVKLWNVNNLEP-ITSIKAH 568
Score = 111 (44.1 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
R + + + + I D+ +I +D NI+ A+ IK +D K+ L GH + S+
Sbjct: 376 RQGEIIGYNDEIIDIKYINDD-NIIVATNSNEIKTYDLNTKRAQ-VLRGHEDLVMSVDVS 433
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSS 185
I +SGSRD S IWDL K S
Sbjct: 434 ADGKHI-ISGSRDKSAMIWDLEKKES 458
Score = 105 (42.0 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWC--PNEAG 377
E + ++ + HI+SGS D +A +W + K ++ +L H G ++ V P+ +
Sbjct: 424 EDLVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIA-QLTGHTGVISCVALPKKPSTSM 482
Query: 378 KIVTSSDDYTVRLW 391
+T+SDD T++LW
Sbjct: 483 FAITASDDRTIKLW 496
Score = 101 (40.6 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 28/88 (31%), Positives = 45/88 (51%)
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKS 155
+++ + W H+ I ++ I NI+ +AS D+T+K+WD EK CT H +
Sbjct: 118 DQSLVKIWKGHEGPINEID-IHSSGNIVASASSDKTVKVWDLEKGYCTHNFQ-HDDVVTM 175
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCK 183
L HPT LV+ D + ++DL K
Sbjct: 176 LKFHPTLLK-LVTVCLDLNIRVYDLVTK 202
Score = 86 (35.3 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 34/127 (26%), Positives = 61/127 (48%)
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEI 328
A E ++ IS D +F TAS D + L+NV L+ PI R ++V E
Sbjct: 525 AHEKDINSISIAPNDK--IFATAS-QDSYVKLWNVNNLE--PITSIKAHRRGVWHV--EF 577
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYT 387
P L+ S+DG +W ++ +K L+ H G V ++ + +IV+ + +
Sbjct: 578 SPIDQCFLTCSADGTIKIWSLSDYTC--LKTLEGHKGSVLKASFI-SFGMQIVSVASEGL 634
Query: 388 VRLWSLE 394
++LW+++
Sbjct: 635 IKLWNIK 641
Score = 81 (33.6 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDY 386
I PN + S D +W VN +PI +K+H V V + P + +T S D
Sbjct: 535 IAPNDKIFATASQDSYVKLWNVNN--LEPITSIKAHRRGVWHVEFSPIDQC-FLTCSADG 591
Query: 387 TVRLWSLEN 395
T+++WSL +
Sbjct: 592 TIKIWSLSD 600
Score = 70 (29.7 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 21/78 (26%), Positives = 32/78 (41%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
IL + IK + E + GH G I + H ++ +I+ S S D + +WDL
Sbjct: 102 ILIGCSNLQIKQYRIEDQSLVKIWKGHEGPINEIDIH-SSGNIVASASSDKTVKVWDLE- 159
Query: 183 KSSPKSNCAESFVFSSAV 200
K C +F V
Sbjct: 160 ----KGYCTHNFQHDDVV 173
Score = 66 (28.3 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKI-VTSSDDYTVRLWSLEN 395
+ SS G+ + K A K+ +H+ ++ +++ PN+ KI T+S D V+LW++ N
Sbjct: 502 TSSSGGDDSKKKDKKISASVTKI-AHEKDINSISIAPND--KIFATASQDSYVKLWNVNN 558
Score = 45 (20.9 bits), Expect = 6.2e-08, Sum P(3) = 6.2e-08
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 436 DRSYNSDDVLNQINSSDPKNMP-IIRTPEAQKKKIPSFDTKEAFEKT 481
D++Y L+Q+ K M I+TP +QKKK + K+ F K+
Sbjct: 858 DQNYKKS--LDQLIKEPTKPMKKSIQTPTSQKKK----EKKKTFFKS 898
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 157 (60.3 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 71/299 (23%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 392 FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCK 451
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 452 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 505
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 506 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 555
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 614
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 615 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 669
Score = 128 (50.1 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 65/266 (24%), Positives = 115/266 (43%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + + D+L SGS D + +WD C + E + +
Sbjct: 387 KCKGTFVGHQGPVWCLCVY-SMGDLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 444
Query: 199 AVVKGAHLLSQSK--RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQ 256
++G L S S + ++ + + D S+ N + + +LKA
Sbjct: 445 LCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLF----SGSLKA- 499
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 500 -IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVL 555
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 556 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 607
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 608 ISTPDQT-KVFSASYDRSLRVWSMDN 632
>UNIPROTKB|F7DHZ7 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0002092
"positive regulation of receptor internalization" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0005814 "centriole"
evidence=ISS] [GO:0005911 "cell-cell junction" evidence=ISS]
[GO:0005912 "adherens junction" evidence=ISS] [GO:0005929 "cilium"
evidence=ISS] [GO:0005932 "microtubule basal body" evidence=ISS]
[GO:0007169 "transmembrane receptor protein tyrosine kinase
signaling pathway" evidence=ISS] [GO:0007417 "central nervous
system development" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0030862 "positive regulation of polarized
epithelial cell differentiation" evidence=ISS] [GO:0030902
"hindbrain development" evidence=ISS] [GO:0031513 "nonmotile
primary cilium" evidence=ISS] [GO:0034613 "cellular protein
localization" evidence=ISS] [GO:0035844 "cloaca development"
evidence=ISS] [GO:0035845 "photoreceptor cell outer segment
organization" evidence=ISS] [GO:0039008 "pronephric nephron tubule
morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0005932 GO:GO:0042384 GO:GO:0035844
GO:GO:0001947 GO:GO:0030902 GO:GO:0070121 GO:GO:0070986
GO:GO:0001738 GO:GO:0071599 GO:GO:0035845 GO:GO:0030862
GO:GO:0002092 GO:GO:0039023 GO:GO:0039008 GO:GO:0010842
GO:GO:0065001 GO:GO:0031513 GeneTree:ENSGT00530000063479
Ensembl:ENSECAT00000021170 Uniprot:F7DHZ7
Length = 996
Score = 145 (56.1 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 465 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 511
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW K+D +LTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 512 LCWSKDDRYVLTASSDGTARIWKNEVNNTNTFRVLPHPSFVYTAKFHPAVKELVVTGCYD 571
Query: 173 GSFAIWDLRCKSSP 186
+W + + P
Sbjct: 572 SVIRVWKVDMREEP 585
Score = 62 (26.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 25/107 (23%), Positives = 42/107 (39%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
+V W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 619 VVVVWNTYVKVGDVQHSVRHWSVTQEIKESEFKGIPISYLEVHPNGKRLLIHTKDSTLRI 678
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS D YVW
Sbjct: 679 MDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDAIVYVW 722
>UNIPROTKB|E1BWN2 [details] [associations]
symbol:E1BWN2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005912 "adherens junction"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA] [GO:0033365 "protein
localization to organelle" evidence=IEA] [GO:0060271 "cilium
morphogenesis" evidence=IEA] Pfam:PF00018 InterPro:IPR017986
InterPro:IPR001452 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PRINTS:PR00452 PROSITE:PS50002 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00326 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005911 SUPFAM:SSF50044 GO:GO:0005912
GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:AADN02025521 EMBL:AADN02025522
IPI:IPI00588508 Ensembl:ENSGALT00000022607 Uniprot:E1BWN2
Length = 1174
Score = 135 (52.6 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 22/80 (27%), Positives = 43/80 (53%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGA-LMGHTGSIKSLCSH 159
+ ++ H N ++DLCW K+ ++LTAS D T+++W E + + + H + + H
Sbjct: 656 LREFYGHLNIVYDLCWSKDSQHLLTASSDGTVRMWKIETQVASAVKVFPHPSFVYTAKYH 715
Query: 160 PTNSDILVSGSRDGSFAIWD 179
P ++V+G D +W+
Sbjct: 716 PVADSLVVTGCYDAVIRVWN 735
Score = 79 (32.9 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 31/123 (25%), Positives = 51/123 (41%)
Query: 242 NSIVKFWDTRNLKAQITQAWPHAE-SSSAKETRLHG--ISSLSQDSNGVFLTASCMDHRI 298
+ ++ WDT ++K + H + KE L G I+ L NG L D +
Sbjct: 774 SGLIIVWDT-SVKGSSQCLFQHWRINKEIKENDLRGTPINHLEVHPNGRRLLIHAKDSTL 832
Query: 299 YLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK 358
+ ++ L + + G + S + P + + SGS DG AYVW N D +
Sbjct: 833 RITDLRIL---ATKKYIGATNYREKIHSTLTPCGTFLFSGSEDGKAYVW--NPETGDQVA 887
Query: 359 LKS 361
+ S
Sbjct: 888 VYS 890
Score = 38 (18.4 bits), Expect = 7.4e-08, Sum P(3) = 7.4e-08
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 8 SFFLNVRSRELNGFKARKRPYFGDVVTDFT 37
++ L+V E+N K + R + +++FT
Sbjct: 204 AYQLHVAENEVNAIKKKIRMKLKEQMSEFT 233
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 106 (42.4 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIW 178
DIL S S D + ++
Sbjct: 161 DILASASYDNTIKMF 175
Score = 94 (38.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 90 (36.7 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 13/35 (37%), Positives = 26/35 (74%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+H+ +V AV W P AG++++ SDD T+++W +++
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKVDD 335
Score = 79 (32.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-----KCTGALMGHTGSIKSLCSHP 160
AH + + W + +AS D TIK++ AE + CT L HT ++ S+
Sbjct: 146 AHTQDVKRVVWHPTKDILASASYDNTIKMF-AESQLDSDWDCTATLSSHTSTVWSI-DFD 203
Query: 161 TNSDILVSGSRDGSFAIW 178
D LVS S D + IW
Sbjct: 204 AEGDRLVSCSDDKTLKIW 221
Score = 74 (31.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I++W T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 75/295 (25%), Positives = 129/295 (43%)
Query: 108 QNAIFDLCWIK--EDTN--ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPT 161
+ +F WI E T ILT S D+T +IW E K ++GHT +K + +
Sbjct: 95 EQCMFHDDWISAIEGTEEWILTGSYDKTSRIWSLEGKSIM-TIVGHTDVVKDVAWVKKDS 153
Query: 162 NSDILVSGSRDGSFAIWDLRC-KSSPKS-NCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
S +L+S S D + +W+ ++ K+ +C + +V A + +K S
Sbjct: 154 LSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--AGSVDSIAVDSTGTKFCSGSWDK 211
Query: 220 SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISS 279
+ I S + +E + ++ N K T L +T+ P S KE ISS
Sbjct: 212 MLKIWSTVPTDEEDEMEEST--NRPRKKQKTEQLG--LTRT-PIVTLSGHKEA----ISS 262
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSG 338
+ +AS DH I +++V + G ++ +G ++ + S +C + SG
Sbjct: 263 VLWSDAEEICSAS-WDHTIKVWDV---ESGSLKSTLTGNKVFNCISYSPLC---KRLASG 315
Query: 339 SSDGNAYVWQVNKPQADPIKLK--SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S+D + +W + L SH G VT+V W P ++++ S D V+LW
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLW 370
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 75/293 (25%), Positives = 123/293 (41%)
Query: 105 VAHQNAIFDLCWIKEDTN---ILTASGDQTIKIWD----AEKKKCTGALMGHTGSIKSLC 157
V H + + D+ W+K+D+ +L+AS DQTI +W+ K K GH GS+ S+
Sbjct: 137 VGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIA 196
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL-LSQSKRVSRR 216
T + SGS D IW + + ES K L L+++ V+
Sbjct: 197 VDSTGTKFC-SGSWDKMLKIWST-VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL- 253
Query: 217 KAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG 276
+I+SVL+ D I +AS ++I K WD ES S K T L G
Sbjct: 254 SGHKEAISSVLW-SDAEEICSASWDHTI-KVWDV--------------ESGSLKST-LTG 296
Query: 277 ---ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP-NA 332
+ +S L + D I L++ D G + S + + P +
Sbjct: 297 NKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKD-GSLVSLSLTSHTGWVTSVKWSPTHE 355
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
++SGS D +W +A L +H+ +V +V+W ++G +++ D
Sbjct: 356 QQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW--TDSGLLLSGGAD 406
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 156 (60.0 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 71/299 (23%), Positives = 130/299 (43%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 392 FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCK 451
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 452 ---LYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVWDI- 505
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA-ESSSAKETRLHGISSLS 281
+ + L LK E++ +N W R L A + + + ++ + R +
Sbjct: 506 VGTELKLKKELT-----GLNH----W-VRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVL 555
Query: 282 QDSNGVFLTASCMDHRI----Y--LYNVLQLD-KGPIQHFSGCRIESFYVKSEIC-PNAS 333
Q S G + + +H I Y L +V ++ K ++ +G + + Y + I P+ +
Sbjct: 556 QTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTG-HVGTVYALAVISTPDQT 614
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ S S D + VW ++ L+ H G VTA+ G++ + + D TV++W+
Sbjct: 615 KVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTVKVWT 669
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 67/266 (25%), Positives = 116/266 (43%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESF--VFSS 198
KC G +GH G + LC + + D+L SGS D + +WD C + E + +
Sbjct: 387 KCKGTFVGHQGPVWCLCVY-SMGDLLFSGSSDKTIKVWDT-CTTYKCQKTLEGHDGIVLA 444
Query: 199 AVVKGAHLLSQSK--RVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQ 256
++G L S S + ++ + + D S+ N V F + +LKA
Sbjct: 445 LCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHN--VLF--SGSLKA- 499
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L + ++ S I ++++ LD +
Sbjct: 500 -IKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLY---SGSYQTIKIWDIRTLDCIHVL 555
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQV-NKPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + +K Q L H G V AV
Sbjct: 556 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIESKEQVRT--LTGHVGTVYALAV 607
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 608 ISTPDQT-KVFSASYDRSLRVWSMDN 632
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 109 (43.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 63/281 (22%), Positives = 113/281 (40%)
Query: 123 ILTASGDQTIKIWDAEKKKCTG-ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
I + S D I WD++ + G + GHT + + D LV+ S D + +L
Sbjct: 339 IYSGSNDGHINYWDSDTGENDGFSGKGHTNQVSRMAVD--EMDQLVTCSMDDTVRYTNLS 396
Query: 182 CKSSPKSNCAESFVFSS--AVVKGAH--LLSQSKRVSRR-KAASMSITSVLYLKDEVSIA 236
+ + + V AV G + +L + V + K +I + Y + V++
Sbjct: 397 KRDYSGQDAVKMDVQPKCLAVGPGGYTVVLCIGQIVLMKDKKKCFAIDDLGYEPEAVAVH 456
Query: 237 TASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDH 296
S+ N++ Q E + ++ L+ +G FL A C +
Sbjct: 457 PGGG--SVAVGGTDGNVRLYSIQGTSLKSDDKTLEAK-GPVTDLAYSHDGAFL-AVCDAN 512
Query: 297 RIYLYNVLQLDKGPIQH--FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
++ V + G ++H F G + + P+ H SG D YVW V+ P+
Sbjct: 513 KVV--TVFSVPDGYVEHNVFYGHHAKVVCIAWS--PDNEHFASGGMDMMVYVWTVSDPET 568
Query: 355 DPIKLK-SHD-GEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
IK+ +H V+ + W +VT+S D +V+ WS+
Sbjct: 569 R-IKIPDAHRLHHVSGLAWLDEHT--LVTTSHDASVKEWSI 606
Score = 94 (38.1 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 56 VSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKA-RISDWVAHQNAIFDL 114
V+ + S + + FA + DG + ++D + EK + AH I+ +
Sbjct: 194 VNCVRFSPDGNRFATASADGQIFIYDGK-----------TGEKVCALGGGKAHDGGIYAI 242
Query: 115 CWIKEDTNILTASGDQTIKIWD 136
W + + +L+ASGD+T KIWD
Sbjct: 243 SWSPDSSQLLSASGDKTAKIWD 264
Score = 81 (33.6 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
S+I SGS+DG+ W + + D K H +V+ + +E ++VT S D TVR +
Sbjct: 337 SYIYSGSNDGHINYWDSDTGENDGFSGKGHTNQVSRM--AVDEMDQLVTCSMDDTVRYTN 394
Query: 393 L 393
L
Sbjct: 395 L 395
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 151 (58.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 79/313 (25%), Positives = 128/313 (40%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H I D+ W + +AS D T+ IWD + C L GH +KS
Sbjct: 52 KTVLSD--GHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKS 109
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQS-KRVS 214
+ S + +L + SRD S IW++ A+ + A V H SQ K+V
Sbjct: 110 V-SWSKSGALLATCSRDKSVWIWEV----------AQEDEYECAAVLNTH--SQDVKKVE 156
Query: 215 RRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRL 274
+ + S Y + + + +S +DT L + + W A +S +RL
Sbjct: 157 WHPNEDV-LASASY-DNTIQLYREDLADSDWSSFDT--LASHDSTVWSIAFDASG--SRL 210
Query: 275 HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLD-KGPIQHFSGCRIESFYVKS--EI--C 329
+S S D V + + V D K P+ C + F+ ++ +I C
Sbjct: 211 ---ASCSDDQT-VRIWQEYKPGNEF--GVACPDGKTPVWKCV-CTLSGFHSRAVYDISWC 263
Query: 330 PNASHILSGSSDGNAYVWQ------VNKPQADPIKLK-SHDGEVTAVNWCPNEAGKIVTS 382
I + D +++ N+P + + K +H + V W P AG +VT+
Sbjct: 264 KKTGLIATACGDDMVRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTT 323
Query: 383 SDDYTVRLWSLEN 395
SDD V+LW E+
Sbjct: 324 SDDGDVKLWKFED 336
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 153 (58.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 77/299 (25%), Positives = 121/299 (40%)
Query: 102 SDWVAHQNAIFDLCWIKEDTNILTA-SGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
SDW+ + F D +L + S D TIK+WD L GH+ S++S+ P
Sbjct: 41 SDWI--ETVTFS-----PDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 161 TNSDILVSGSRDGSFAIWD-----LRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSR 215
N +L SGS D + +W+ L+ S+ ES FS + K
Sbjct: 94 -NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTI- 151
Query: 216 RKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLH 275
+ S + SV + D +A+ SA +I K WD+ + T H+ +
Sbjct: 152 -EGHSDWVLSVAFSPDGQLLASGSAEKTI-KLWDSATCGLKHTLGG-HS----------N 198
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH-FSGC--RIESFYVKSEICPNA 332
+ L +G L + D I L++ G ++H G +IES PN
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDP---PSGSLKHTLEGHSNKIESL----AFSPNG 251
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ SGSSD +W LK H V +V + P ++ + + S D T++LW
Sbjct: 252 QLLASGSSDATIKLWDTATGSFRHT-LKGHSDMVLSVVFSP-DSQLLESGSGDNTIKLW 308
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 150 (57.9 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 107 HQNAIFDLCWIKEDTNI-LTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H + + D C + D++ L+AS D+TI++WD EK +CT +GHT + S+ P N +
Sbjct: 62 HSHFVSD-CALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQV 120
Query: 166 LVSGSRDGSFAIWDL--RCK 183
VSGSRD + IW++ CK
Sbjct: 121 -VSGSRDKTIKIWNIIGNCK 139
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 117 (46.2 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 142
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 143 VSASRDKTIKMWEVQ 157
Score = 104 (41.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 58 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 116
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 117 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 147
Score = 98 (39.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 68 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 127
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 128 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 179
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 180 DGTLIASCSNDQTVRVW 196
Score = 83 (34.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 126 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 183
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 184 IASCSNDQTVRVWVVATK 201
Score = 78 (32.5 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 246 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 302
Query: 394 EN 395
+N
Sbjct: 303 KN 304
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 179 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 235
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 236 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 289
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 290 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 342
Score = 68 (29.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 38 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 71
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 315 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 155 (59.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 85/372 (22%), Positives = 149/372 (40%)
Query: 35 DFTEIGAVTVEHHGEETPPL-AVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHR 93
D E+ A H EET P+ A+S T + S A D ++F RR S +
Sbjct: 238 DDIEVLADDTSDHPEETSPVRAISRAATKRLSQP-AGGLLDSITNIF-GRRSFSSVPAPQ 295
Query: 94 ENAE-------KARISDWV-----AHQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKK 140
+N + + R+ AH + + + +L G D+ +K+W+
Sbjct: 296 DNVDTHPGSSKEVRVPVTAVCVFDAHDGEV-NAVQFSPGSRLLATGGMDRRVKLWEVFGD 354
Query: 141 KCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW---DLRCKSSPKSNCAE--- 192
KC G+L G I S+ + L++ S D + IW D R + + + +
Sbjct: 355 KCEFKGSLSGSNAGITSI-EFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLS 413
Query: 193 -SFVFSSA-VVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEV---SIATASAVNSIVKF 247
F+ +A +V G+H + R K ++ + D V + + ++F
Sbjct: 414 AKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRF 473
Query: 248 WDTR-NLKAQIT--QAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVL 304
WD R N ++ ++ Q +S R + S S+D +D RI V
Sbjct: 474 WDIRYNTRSLVSLGQLLGKQTASRFNPERTE-LLSCSRDD-----LLKIIDLRINA--VR 525
Query: 305 QLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDG 364
Q P G + S + + P+ S++ +GS++G+ YVW V + + + K H
Sbjct: 526 QTFSAP-----GFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGKVEKVLSKHHSS 580
Query: 365 EVTAVNWCPNEA 376
+ AV W P+ A
Sbjct: 581 PINAVAWSPSGA 592
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 106 (42.4 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 44/164 (26%), Positives = 67/164 (40%)
Query: 32 VVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC 91
+V + I V V GEE P+A + + + +FA+ + + D + L +F
Sbjct: 139 MVPHYGGINRVRVSWLGEE--PVAGIWSEKGQ-VEVFALRR---LLQVVDDPQALATFL- 191
Query: 92 HRENAEKARISDWVAHQNAIFDLCWI-KEDTNILTASGDQTIKIW---DAEKKKCTGA-L 146
E A I + H F L W + +LT + I +W D
Sbjct: 192 RDEQARVKPIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPF 251
Query: 147 MGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNC 190
MGHT S++ L PT + S S D S IWD+R ++P C
Sbjct: 252 MGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR--AAPSKAC 293
Score = 93 (37.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 335 ILSGSSDGNAYVWQVNK-PQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSG DG +W + + P+ K H +T+V W P ++G S D + W
Sbjct: 317 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWD 376
Query: 393 L 393
L
Sbjct: 377 L 377
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 132 (51.5 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
R+S + C +D I+T+SGD T +WD E + T GH+G + SL
Sbjct: 134 RVSRELPGHTGYLSCCRFLDDGQIITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLS 193
Query: 160 PTNSDILVSGSRDGSFAIWDLR---CKSS 185
P + VSG+ D S +WD+R C+ S
Sbjct: 194 P-DLKTFVSGACDASSKLWDIRDGMCRQS 221
Score = 61 (26.5 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+L+G D N VW K + L HD V+ + ++ + T S D +R+W+
Sbjct: 285 LLAGYDDFNCSVWDALKGGRAGV-LAGHDNRVSCLG-VTDDGMAVATGSWDSFLRIWN 340
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 106 (42.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 32/135 (23%), Positives = 61/135 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L H+ +K + HPT
Sbjct: 98 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHSQDVKRVVWHPTK- 156
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKR-VSRRKAASMS 222
+IL S S D + ++ S +C + ++ V + +R VS A++
Sbjct: 157 EILASASYDNTIKMYAESALDSDW-DCTATLSSHTSTVWSIDFDADGERLVSCSDDATLK 215
Query: 223 ITSVLYLKDEVSIAT 237
I + +E IAT
Sbjct: 216 IWRAYHPGNEAGIAT 230
Score = 105 (42.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 28/83 (33%), Positives = 42/83 (50%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC 157
K +SD H+ I ++ W + +AS D T IW K +CT L GH +KS+
Sbjct: 51 KTILSD--GHKRTIREVRWSPCGEYLASASFDATTAIWS--KHECTATLEGHENEVKSV- 105
Query: 158 SHPTNSDILVSGSRDGSFAIWDL 180
S + +L + SRD S IW++
Sbjct: 106 SWSRSGGLLATCSRDKSVWIWEV 128
Score = 89 (36.4 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 13/34 (38%), Positives = 24/34 (70%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+H+ +V AV W P G++++ SDD T+++W L+
Sbjct: 297 AHEQDVNAVEWNPVNVGQLISCSDDGTIKIWKLQ 330
Score = 78 (32.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-----KCTGALMGHTGSIKSLCSHP 160
AH + + W + +AS D TIK++ AE CT L HT ++ S+
Sbjct: 142 AHSQDVKRVVWHPTKEILASASYDNTIKMY-AESALDSDWDCTATLSSHTSTVWSI-DFD 199
Query: 161 TNSDILVSGSRDGSFAIW 178
+ + LVS S D + IW
Sbjct: 200 ADGERLVSCSDDATLKIW 217
Score = 74 (31.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM---GHTGSIKSLCSHPTNS 163
H+ I+ + W + + + D+ I+IW T + GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKGNSFASCGEDKAIRIWSLSGNTWTTKTILSDGHKRTIREVRWSPCG- 71
Query: 164 DILVSGSRDGSFAIWDLR-CKSSPKSNCAESFVFSSAVVKGAHLLSQSKR 212
+ L S S D + AIW C ++ + + E+ V S + + LL+ R
Sbjct: 72 EYLASASFDATTAIWSKHECTATLEGH--ENEVKSVSWSRSGGLLATCSR 119
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 117 (46.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDL 180
VS SRD + +W++
Sbjct: 208 VSASRDKTMKMWEV 221
Score = 104 (41.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + T +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK-LLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 96 (38.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D G L + D I L++ + H
Sbjct: 133 KVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNE 375
+ S I PN HI+S S D +W+V A +K+ G V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTMKMWEV----ATGYCVKTFTGHREWVRMVRPNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLLASCSNDQTVRVW 261
Score = 80 (33.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W ++ + L HD V V + P G+ V S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDISTGMC-LMTLVGHDNWVRGVLFHPG--GRFVVSCADDKTLRIWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 67 (28.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-LMVSASEDATIKVWD 136
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDYTV 388
P ++S + D +W + L +H+ VT++++ ++A +VT S D TV
Sbjct: 348 PGGRFVVSCADDKTLRIWDYKNKRCMKT-LSAHEHFVTSLDF--HKASPYVVTGSVDQTV 404
Query: 389 RLW 391
++W
Sbjct: 405 KVW 407
>ZFIN|ZDB-GENE-030131-8101 [details] [associations]
symbol:wdr37 "WD repeat domain 37" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-8101
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00640000091456 CTD:22884 EMBL:AL954666 EMBL:CT583671
IPI:IPI00900634 RefSeq:NP_001161736.1 UniGene:Dr.106574
Ensembl:ENSDART00000111491 Ensembl:ENSDART00000134598 GeneID:558075
KEGG:dre:558075 NextBio:20882300 Uniprot:E7FEE4
Length = 494
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 37/140 (26%), Positives = 63/140 (45%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
+HQ + W+ ++TAS D+ ++D E + L GH + C+HPT +
Sbjct: 279 SHQGVVIAADWLVGGKQVVTASWDRAANLYDVETSELVHTLTGHDQELTHCCTHPTQR-L 337
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+V+ SRD +F +WD R P + F + V A VS ++ +
Sbjct: 338 VVTSSRDTTFRLWDFR---DPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWD 394
Query: 226 VLYLKDEVS-IATASAVNSI 244
+ ++ ++ I T SAVN I
Sbjct: 395 LKNMRSPIATIRTDSAVNRI 414
Score = 122 (48.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGAL 146
SF A + ++V H++ I+DL + +L TAS D +W E KC
Sbjct: 136 SFKATTSRAVCQLVKEYVGHRDGIWDLAVTRVQPLVLGTASADHCSMLWSIETGKCLLKY 195
Query: 147 MGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
GH GS+ S+ HPT + ++ S D + IW
Sbjct: 196 AGHAGSVNSIKFHPTEQ-MALTASGDQTAHIW 226
Score = 77 (32.2 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKL-KSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P +++ S D +W P + + + H VT+ + + +V+ SDD TV
Sbjct: 333 PTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGD--NVVSGSDDRTV 390
Query: 389 RLWSLEN 395
++W L+N
Sbjct: 391 KVWDLKN 397
Score = 61 (26.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 359 LKSHDGEVTAVNWCPNEAGK-IVTSSDDYTVRLWSLE 394
LKSH G V A +W GK +VT+S D L+ +E
Sbjct: 277 LKSHQGVVIAADWLVG--GKQVVTASWDRAANLYDVE 311
Score = 59 (25.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 19/70 (27%), Positives = 30/70 (42%)
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS 383
V S + +++SGS D VW + K PI D V ++ N+ I
Sbjct: 370 VTSAVFTVGDNVVSGSDDRTVKVWDL-KNMRSPIATIRTDSAVNRISVSANQR-IIALPH 427
Query: 384 DDYTVRLWSL 393
D+ VRL+ +
Sbjct: 428 DNRQVRLFDM 437
Score = 43 (20.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 222 SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQI 257
++TS ++ + ++ + S + VK WD +N+++ I
Sbjct: 369 TVTSAVFTVGD-NVVSGSD-DRTVKVWDLKNMRSPI 402
>UNIPROTKB|F7DII4 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9796 "Equus
caballus" [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0002092
"positive regulation of receptor internalization" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0005814 "centriole"
evidence=ISS] [GO:0005911 "cell-cell junction" evidence=ISS]
[GO:0005912 "adherens junction" evidence=ISS] [GO:0005929 "cilium"
evidence=ISS] [GO:0005932 "microtubule basal body" evidence=ISS]
[GO:0007169 "transmembrane receptor protein tyrosine kinase
signaling pathway" evidence=ISS] [GO:0007417 "central nervous
system development" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0030862 "positive regulation of polarized
epithelial cell differentiation" evidence=ISS] [GO:0030902
"hindbrain development" evidence=ISS] [GO:0031513 "nonmotile
primary cilium" evidence=ISS] [GO:0034613 "cellular protein
localization" evidence=ISS] [GO:0035844 "cloaca development"
evidence=ISS] [GO:0035845 "photoreceptor cell outer segment
organization" evidence=ISS] [GO:0039008 "pronephric nephron tubule
morphogenesis" evidence=ISS] [GO:0039023 "pronephric duct
morphogenesis" evidence=ISS] [GO:0042384 "cilium assembly"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050795 "regulation of behavior" evidence=ISS] [GO:0060271
"cilium morphogenesis" evidence=ISS] [GO:0065001 "specification of
axis polarity" evidence=ISS] [GO:0070121 "Kupffer's vesicle
development" evidence=ISS] [GO:0070986 "left/right axis
specification" evidence=ISS] [GO:0071599 "otic vesicle development"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0042384
GO:GO:0035844 GO:GO:0001947 GO:GO:0030902 GO:GO:0070121
GO:GO:0070986 GO:GO:0001738 GO:GO:0071599 GO:GO:0035845
GO:GO:0030862 GO:GO:0002092 GO:GO:0039023 GO:GO:0039008
GO:GO:0010842 GO:GO:0065001 GO:GO:0031513
GeneTree:ENSGT00530000063479 Ensembl:ENSECAT00000021153
Uniprot:F7DII4
Length = 1188
Score = 145 (56.1 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 604 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 650
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW K+D +LTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 651 LCWSKDDRYVLTASSDGTARIWKNEVNNTNTFRVLPHPSFVYTAKFHPAVKELVVTGCYD 710
Query: 173 GSFAIWDLRCKSSP 186
+W + + P
Sbjct: 711 SVIRVWKVDMREEP 724
Score = 62 (26.9 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 25/107 (23%), Positives = 42/107 (39%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
+V W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 758 VVVVWNTYVKVGDVQHSVRHWSVTQEIKESEFKGIPISYLEVHPNGKRLLIHTKDSTLRI 817
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS D YVW
Sbjct: 818 MDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDAIVYVW 861
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 74/301 (24%), Positives = 122/301 (40%)
Query: 107 HQNAIFDLCWIKED--TNIL-TASGDQTIKIWD----AEKKKCTGALMGHTGSIKSLCSH 159
H + + D+ W+K D T++L TAS DQTI +W+ K K GH GS+ ++ +
Sbjct: 139 HTDVVKDVAWVKRDGLTSLLLTASLDQTILLWEWNSERNKLKARHCCRGHAGSVDTIATD 198
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
PT + SGS D IW + E K L +
Sbjct: 199 PTRTKFC-SGSWDKMLKIWSAVATEEEEEE-EEPPSRPRKKQKTEQLGLTRTPLMTLSGH 256
Query: 220 SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISS 279
+ +++SVL+L E I +AS ++I + WD AE+ S K T L G
Sbjct: 257 NEAVSSVLWLDSE-EICSASWDHTI-RLWD--------------AETGSVK-TSLTGSKV 299
Query: 280 LSQDSNGVF---LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH-I 335
+ S L + D + L++ D G + S + + P+ H +
Sbjct: 300 FNHISYSPLCRRLASGSTDRHVRLWDPRSKD-GSLVLLSLTSHSGWVTAVKWAPSHEHQL 358
Query: 336 LSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD--YTVRLWSL 393
+SGS D +W +A + +H+ +V V+W + + +D+ YT R +
Sbjct: 359 VSGSLDNLVKLWDTRSCKAPLYDVSAHEDKVLCVDWTDSRL-MLSGGADNKLYTYRYTAC 417
Query: 394 E 394
E
Sbjct: 418 E 418
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 77/330 (23%), Positives = 135/330 (40%)
Query: 99 ARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALM-GHTGSIKS 155
+++SD H++ ++++ W T + + GD++I++W E C L+ GH +++
Sbjct: 4 SKLSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRG 63
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCA-----ESFVFSSAVVKGAHLL--- 207
+ S L S S DG+ IW R + +CA E+ V + L
Sbjct: 64 V-SWSNCGRYLASSSFDGTTCIW--RRQDDTFESCATLEGHENEVKACGWSPSGRFLATC 120
Query: 208 SQSKRV--------------SRRKAASMSITSVLYLKDEVSIATASAVNSIVKF------ 247
S+ K V S + S + VL+ D +A+AS N+I F
Sbjct: 121 SRDKTVWIWEVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDD 180
Query: 248 WDTR-NLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIY-LYNVLQ 305
W L + W E +L +S + D + V++ + D R + L L+
Sbjct: 181 WQCYCTLDKHASTVWG-LSFGPGPEPQL---ASCAADGS-VYVWGTKGDRRSWELCGTLE 235
Query: 306 LDKGPIQHFSGCRIESFYVKSEIC-PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDG 364
P+ S CR F + C NA + DG W++ ++H
Sbjct: 236 RHPRPVYDVSWCRTRGFLATA--CGDNAVRVFV--KDGGDCSWRLGCTLT-----QAHSQ 286
Query: 365 EVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+V +V+W P+ G + ++ DD VRLW ++
Sbjct: 287 DVNSVSWSPS-GGLLASAGDDGYVRLWQID 315
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 107 (42.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + D + + I++AS D++I WD L H G ++ +C + +S I
Sbjct: 58 HADEVTDAAGSCDSSYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNE-DSSIA 116
Query: 167 VSGSRDGSFAIWDLRCK 183
+SG RD + WD+R +
Sbjct: 117 ISGGRDNAVMCWDIRTR 133
Score = 86 (35.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 277 ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI-QHFSGCRIESFYVKSEICPNASHI 335
I+ L+Q + L A C D + L L + G + + G R + ++++ I N + I
Sbjct: 186 ITYLAQTRDEQCLVAGCQDSVVRL---LDCETGGLLSEYRGHRGDDYHIECGILSNDAQI 242
Query: 336 LSGSSDGNAYVWQV 349
++GSSDG+A+V+ +
Sbjct: 243 VTGSSDGDAFVYDL 256
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 73/298 (24%), Positives = 128/298 (42%)
Query: 120 DTNILTASG-DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
D +++ + G D +K+W A K GH I ++ P + I SGS D + +W
Sbjct: 187 DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI-ASGSDDKTIRLW 245
Query: 179 D-LRCKSSPKSNCAE-SFVFSSAVV-KGAHLLS------------QSKRVSRRKAA-SMS 222
+ L K+ P ++V++ A KG L+S +S RV + A S
Sbjct: 246 NVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDP 305
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQ 282
++ + + D IA+ A + +V+ WDT Q + H ++ +SS+
Sbjct: 306 VSGIDVVWDGTLIASC-ATDGLVRIWDTST--GQCLRTLVHEDNPP--------VSSVKF 354
Query: 283 DSNGVFLTASCMDHRIYLYNVLQ-LDKGPIQHFSGCRIE---SFYVKSEICPNAS----H 334
NG ++ A +D + L++ ++ Q S + +F V + P +
Sbjct: 355 SPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAF 414
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD-DYTVRLW 391
+SGS DG W V + ++++HDG V V+ C G+ + S D TVR+W
Sbjct: 415 AVSGSEDGAILCWDVVTKKVLQ-RIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVW 471
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 110 (43.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H I D+ W + +AS D T+ IWD + + C L GH +KS
Sbjct: 52 KTVLSD--GHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKS 109
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S +W++
Sbjct: 110 V-SWSKSGSLLATCSRDKSVWVWEV 133
Score = 106 (42.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK---KCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W K + + T S D+++ +W+ ++ +C L HT +K + HP +
Sbjct: 103 HENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHP-HE 161
Query: 164 DILVSGSRDGSFAIW 178
DIL S S D + ++
Sbjct: 162 DILASASYDNTIKLY 176
Score = 89 (36.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/122 (27%), Positives = 56/122 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIW--DAEKKKCTGALM--GHTGSIKSLCSHPTN 162
H+ + W + + T D+TI+IW DA ++ ++ GH+ +I+ + P
Sbjct: 13 HRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWSPCG 72
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
L S S D + AIWD K S + C +A ++G ++ K VS K+ S+
Sbjct: 73 Q-YLASASFDATVAIWD---KKSGEFEC-------NATLEGHE--NEVKSVSWSKSGSLL 119
Query: 223 IT 224
T
Sbjct: 120 AT 121
Score = 84 (34.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 350 NKPQADPIKLK-SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++P + + K +H +V V W P G +VT+SDD V+LW E
Sbjct: 289 HEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLWKYE 334
Score = 48 (22.0 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 362 HDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
H V ++WC ++G + T+ D VR++
Sbjct: 252 HSRSVYDISWC-KQSGLLATACGDDMVRIF 280
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 68/298 (22%), Positives = 119/298 (39%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTNSD 164
+H + + D E T +++ S D T+K WD CT L H+ + L N++
Sbjct: 82 SHVDWVNDAALAGEST-LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNN 140
Query: 165 ILVSGSRDGSFAIWDLRCKSSP--KSNCAESFVFSSAV---VKGAHLLSQSKRVSRRKAA 219
++ SG G IWD+ SP K N A S+ V + S +S + +
Sbjct: 141 VVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSNNISVQSSP 200
Query: 220 SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLH--GI 277
S T + + S+ A A+N + + ++ + W S + + R H +
Sbjct: 201 SHGYTPTIAKGHKESVY-ALAMNDTGTMLVSGGTE-KVLRVWDPRTGSKSMKLRGHTDNV 258
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC-PNASHIL 336
L DS G F + D I L++ L + H +S + + C P+ SH+
Sbjct: 259 RVLLLDSTGRFCLSGSSDSMIRLWD---LGQQRCLHTYAVHTDSVWALA--CNPSFSHVY 313
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
SG D Y+ + ++ + K H + A+ + I ++ D +V W E
Sbjct: 314 SGGRDQCLYLTDLATRESVLLCTKEHPIQQLAL-----QDNSIWVATTDSSVERWPAE 366
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 63/313 (20%), Positives = 118/313 (37%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDA-EKKKCTGALMGHTGSIKS 155
K + W H AI L + ++L + S D T+KIWD +++ GH+ S+
Sbjct: 240 KKMVHQWKHHTKAITSLNFFPNSGHLLLSGSADSTVKIWDVYHQRELLRTYSGHSKSLSD 299
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLL--SQSKRV 213
+ T+ D +S S D +WD + C F K H++ + + +
Sbjct: 300 TTFN-THGDKFLSASFDRMMKLWD-----TETGKCIAKFTTG----KTPHVVRFNPTSEL 349
Query: 214 SRRKAASMSITSVLYLKDEVSIATASA-------VNSIVKFWDTRNLKA----QITQAWP 262
A MS ++ T VN+I D R + +AW
Sbjct: 350 GHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCDDGRRFMTTSDDRTLRAWE 409
Query: 263 HAESSSAK---ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVL-QLDKGPIQHFSGCR 318
+ K E L ++ + +G ++ D++I +Y+ + + + + G
Sbjct: 410 YGFGVPIKYIAEPYLFAMTRAATHPSGKYVAYQSSDNQIVVYSSNDKFRQNRKKSYRGHN 469
Query: 319 IESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK 378
+ +I + + SG + G W + K++ DG+V+ V W P E+ K
Sbjct: 470 NAGSAIDIDISADGQFLASGDTGGYVAFWDWKSCKMFH-KIQVEDGQVSCVKWHPQESSK 528
Query: 379 IVTSSDDYTVRLW 391
+ T ++ W
Sbjct: 529 VATGGASGIIKFW 541
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 141 (54.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 58/261 (22%), Positives = 119/261 (45%)
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAE---SFVFSSA---VV 201
GH I+SL S +N +LVS S + S +W+++ S +S + VF+ V+
Sbjct: 394 GHRSDIRSL-SLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSIACDYGLCTVFAPGNLHVI 451
Query: 202 KGAHL-------LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLK 254
G L+ + RV+ KA S+ S L L ++ T+ + +VKFWD +
Sbjct: 452 VGTKTGTIEVFELASAARVASIKAHEGSVWS-LVLTPDLRGVTSGGADKLVKFWDFELIA 510
Query: 255 AQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQH 313
+Q S K ++ + +L ++ FL S +D+ + ++ + K +
Sbjct: 511 SQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYTDTV-KFHLSL 569
Query: 314 FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCP 373
+ G ++ + +I +++ I++GS+D N +W ++ +HD + V++ P
Sbjct: 570 Y-GHKLPVMCL--DISDDSTLIITGSADKNIKIWGLDYGDCHK-SFFAHDDSIMQVSFIP 625
Query: 374 NEAGKIVTSSDDYTVRLWSLE 394
+ +++S D ++ W +
Sbjct: 626 S-THHFISASKDKRIKYWDAD 645
Score = 63 (27.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 31/149 (20%), Positives = 66/149 (44%)
Query: 32 VVTDF-TEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFA 90
+V D TE G + H ++ ++ K + S+ S +DG++ ++D+ +
Sbjct: 126 IVWDIITESGLFRLRGHRDQ-----ITSVKLLERSNHLITSSKDGFIKIWDTETQ----H 176
Query: 91 CHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIW---DAEKKKCTGALM 147
C I V H+N I+ + ++T + + + D I+ W E+++ G+ +
Sbjct: 177 C---------IQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQREDGSGI 227
Query: 148 GHTGSIKSLCSHPTNSDILVSG--SRDGS 174
K + + P NS +++ + DGS
Sbjct: 228 ----EPKFIVNTPINSAVIIPDEINEDGS 252
>UNIPROTKB|Q92636 [details] [associations]
symbol:NSMAF "Protein FAN" species:9606 "Homo sapiens"
[GO:0005057 "receptor signaling protein activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] [GO:0006672 "ceramide
metabolic process" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Pfam:PF02893 GO:GO:0005737 GO:GO:0006672 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0005057
Pathway_Interaction_DB:tnfpathway InterPro:IPR004182 SMART:SM00568
EMBL:CH471068 Gene3D:1.10.1540.10 Gene3D:2.30.29.40
InterPro:IPR000409 InterPro:IPR023362 Pfam:PF02138 SMART:SM01026
SUPFAM:SSF81837 PROSITE:PS50197 EMBL:X96586 EMBL:AK294009
EMBL:AC068522 EMBL:AC092700 EMBL:BC041124 IPI:IPI00328260
RefSeq:NP_001138244.1 RefSeq:NP_003571.2 UniGene:Hs.372000
ProteinModelPortal:Q92636 SMR:Q92636 IntAct:Q92636
MINT:MINT-2813141 STRING:Q92636 PhosphoSite:Q92636 DMDM:209572614
PaxDb:Q92636 PRIDE:Q92636 Ensembl:ENST00000038176
Ensembl:ENST00000427130 GeneID:8439 KEGG:hsa:8439 UCSC:uc003xtt.3
CTD:8439 GeneCards:GC08M059496 H-InvDB:HIX0007527 HGNC:HGNC:8017
HPA:HPA023067 HPA:HPA023148 HPA:HPA023151 MIM:603043
neXtProt:NX_Q92636 PharmGKB:PA31795 HOGENOM:HOG000231605
HOVERGEN:HBG005639 InParanoid:Q92636 OMA:DKNRFQS OrthoDB:EOG4M91QQ
PhylomeDB:Q92636 ChiTaRS:NSMAF GenomeRNAi:8439 NextBio:31574
ArrayExpress:Q92636 Bgee:Q92636 CleanEx:HS_NSMAF
Genevestigator:Q92636 GermOnline:ENSG00000035681 Uniprot:Q92636
Length = 917
Score = 115 (45.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 46/186 (24%), Positives = 78/186 (41%)
Query: 36 FTEIGAVTVEHHGEETPPL--AVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHR 93
FT T++ +E+ L ++SF + +S + D S +D+ S A R
Sbjct: 646 FTTSQDSTLKMFSKESKMLQRSISFSNMALSSCLLLPGDATVITSSWDNNVYFYSIAFGR 705
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
R + H +A+ +CW D + +AS D T+K+W + G H +
Sbjct: 706 ------RQDTLMGHDDAVSKICW--HDNRLYSASWDSTVKVWSGVPAEMPGTKRHHFDLL 757
Query: 154 KSLCSHPTNSD---------ILVSGSRDGSFAIWDLRCKS-SPKSNCAESFVFSSAVVKG 203
L H + D +LVSG+++G+ IWDL + + C V +A
Sbjct: 758 AEL-EHDVSVDTISLNAASTLLVSGTKEGTVNIWDLTTATLMHQIPCHSGIVCDTAFSPD 816
Query: 204 A-HLLS 208
+ H+LS
Sbjct: 817 SRHVLS 822
Score = 90 (36.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
+ + +LSGS G VW + + +++ H G VT + W + I+T +D +
Sbjct: 855 DGNSVLSGSQSGELLVWDLLGAKISE-RIQGHTGAVTCI-WMNEQCSSIITGGEDRQIIF 912
Query: 391 WSLE 394
W L+
Sbjct: 913 WKLQ 916
>RGD|727965 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005874 "microtubule" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=IDA] [GO:0030334 "regulation of cell
migration" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:727965 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 GO:GO:0017137 HSSP:P38262 HOGENOM:HOG000267152
HOVERGEN:HBG080376 OrthoDB:EOG4K6G3H EMBL:AF130121 IPI:IPI01016390
UniGene:Rn.79380 ProteinModelPortal:Q9R037 STRING:Q9R037
PhosphoSite:Q9R037 PRIDE:Q9R037 UCSC:RGD:727965 ArrayExpress:Q9R037
Genevestigator:Q9R037 GermOnline:ENSRNOG00000029068 Uniprot:Q9R037
Length = 908
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + DL W K + +L++S D+T+++W +++C H + ++ HP +
Sbjct: 601 HTADLLDLSWSK-NYFLLSSSMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYF 658
Query: 167 VSGSRDGSFAIWDL 180
+SGS DG +W++
Sbjct: 659 LSGSLDGKLRLWNI 672
Score = 93 (37.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/162 (24%), Positives = 77/162 (47%)
Query: 247 FWDTRNLKAQITQAWPHAESSSAKET---RLHGISSLSQDSNGVFLTASCMDHRIYLYNV 303
F+DT +LK TQ H S+ + ++ GI L + N + +T++ D RI LY++
Sbjct: 713 FYDTEHLKYH-TQI--HVRSTRGRNKVGRKITGIEPLPGE-NKILVTSN--DSRIRLYDL 766
Query: 304 LQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ----------VNKPQ 353
L + G S +K+ + ++++SGS D Y+W V + +
Sbjct: 767 RDLSLS--MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDR 824
Query: 354 ADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
D + +K+H+ VT+ + PN + ++ S D + +L ++
Sbjct: 825 NDFWEGIKAHNAVVTSAIFAPNPS--LMLSLDVQSEKLEGID 864
Score = 60 (26.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 288 FLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
FL+ S +D ++ L+N+ G + C N + + G+ DG +
Sbjct: 658 FLSGS-LDGKLRLWNIPDKKVALWNEVDGQT--KLITAANFCQNGKYAVIGTYDGRCIFY 714
Query: 348 QVNKPQADP-IKLKSHDG------EVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ I ++S G ++T + P E KI+ +S+D +RL+ L +
Sbjct: 715 DTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGE-NKILVTSNDSRIRLYDLRD 768
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 107 (42.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ DG + L+D+ + ++E+ ++ DW Q + +
Sbjct: 71 SENNEHVLVTCSGDGSLQLWDTAKATGPLQVYKEHTQEVYSVDW--SQT--------RGE 120
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD GH I S P S S D + IWD+
Sbjct: 121 QLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDV 180
Query: 181 R 181
+
Sbjct: 181 K 181
Score = 86 (35.3 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 168 SASGDQTLRIWDV-KTTGVRIVIPAHQTEILSCDWCKYNENLVVTGAVDCSLRGWDLRN 225
Score = 73 (30.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 205 NENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASCSYDFTVRF 264
Query: 391 WS 392
W+
Sbjct: 265 WN 266
>MGI|MGI:1919654 [details] [associations]
symbol:Wdr44 "WD repeat domain 44" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005874 "microtubule" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=ISO] [GO:0030334 "regulation of cell migration"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919654 GO:GO:0005829 GO:GO:0005794
GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008
GO:GO:0030334 GO:GO:0005874 GeneTree:ENSGT00530000063479
HSSP:P38262 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK088885 EMBL:AK139877 EMBL:BC068151
EMBL:BC049191 IPI:IPI00308560 IPI:IPI00676517 RefSeq:NP_780389.2
UniGene:Mm.423 ProteinModelPortal:Q6NVE8 SMR:Q6NVE8 STRING:Q6NVE8
PhosphoSite:Q6NVE8 PaxDb:Q6NVE8 PRIDE:Q6NVE8
Ensembl:ENSMUST00000035766 Ensembl:ENSMUST00000101670 GeneID:72404
KEGG:mmu:72404 UCSC:uc009suy.1 InParanoid:Q6NVE8 NextBio:336206
Bgee:Q6NVE8 CleanEx:MM_WDR44 Genevestigator:Q6NVE8
GermOnline:ENSMUSG00000036769 Uniprot:Q6NVE8
Length = 915
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + DL W K + +L++S D+T+++W +++C H + ++ HP +
Sbjct: 608 HTADLLDLSWSK-NYFLLSSSMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYF 665
Query: 167 VSGSRDGSFAIWDL 180
+SGS DG +W++
Sbjct: 666 LSGSLDGKLRLWNI 679
Score = 93 (37.8 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 40/162 (24%), Positives = 77/162 (47%)
Query: 247 FWDTRNLKAQITQAWPHAESSSAKET---RLHGISSLSQDSNGVFLTASCMDHRIYLYNV 303
F+DT +LK TQ H S+ + ++ GI L + N + +T++ D RI LY++
Sbjct: 720 FYDTEHLKYH-TQI--HVRSTRGRNKVGRKITGIEPLPGE-NKILVTSN--DSRIRLYDL 773
Query: 304 LQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ----------VNKPQ 353
L + G S +K+ + ++++SGS D Y+W V + +
Sbjct: 774 RDLSLS--MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDR 831
Query: 354 ADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
D + +K+H+ VT+ + PN + ++ S D + +L ++
Sbjct: 832 NDFWEGIKAHNAVVTSAIFAPNPS--LMLSLDVQSEKLEGID 871
Score = 60 (26.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 288 FLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
FL+ S +D ++ L+N+ G + C N + + G+ DG +
Sbjct: 665 FLSGS-LDGKLRLWNIPDKKVALWNEVDGQT--KLITAANFCQNGKYAVIGTYDGRCIFY 721
Query: 348 QVNKPQADP-IKLKSHDG------EVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ I ++S G ++T + P E KI+ +S+D +RL+ L +
Sbjct: 722 DTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGE-NKILVTSNDSRIRLYDLRD 775
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 102 (41.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 31/135 (22%), Positives = 60/135 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HP+
Sbjct: 98 HENEVKSVSWSQSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPSK- 156
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKR-VSRRKAASMS 222
+IL S S D + ++ S +C + ++ V + +R VS ++
Sbjct: 157 EILASASYDNTIKMYAESALDSDW-DCTATLSSHTSTVWSIDFEADGERLVSCSDDTTLK 215
Query: 223 ITSVLYLKDEVSIAT 237
I + +E IAT
Sbjct: 216 IWRAYHPGNEAGIAT 230
Score = 92 (37.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+H+ +V AV W P AG++++ SDD T+++W L+
Sbjct: 297 AHEQDVNAVEWNPVTAGQLISCSDDGTIKIWKLQ 330
Score = 76 (31.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-----KCTGALMGHTGSIKSLCSHP 160
AH + + W + +AS D TIK++ AE CT L HT ++ S+
Sbjct: 142 AHTQDVKRVVWHPSKEILASASYDNTIKMY-AESALDSDWDCTATLSSHTSTVWSI-DFE 199
Query: 161 TNSDILVSGSRDGSFAIW 178
+ + LVS S D + IW
Sbjct: 200 ADGERLVSCSDDTTLKIW 217
Score = 74 (31.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM---GHTGSIKSLCSHPTNS 163
H+ I+ + W + + + D+ I+IW T + GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKGNSFASCGEDKAIRIWSQSGNTWTTKTILSDGHKRTIREVRWSPCG- 71
Query: 164 DILVSGSRDGSFAIWDLR-CKSSPKSNCAESFVFSSAVVKGAHLLSQSKR 212
+ L S S D + AIW C ++ + + E+ V S + + LL+ R
Sbjct: 72 EYLASASFDATTAIWSKHECNATLEGH--ENEVKSVSWSQSGGLLATCSR 119
>ASPGD|ASPL0000067538 [details] [associations]
symbol:AN10942 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0051286 "cell tip" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304
HOGENOM:HOG000162559 OMA:LKDQKKC ProteinModelPortal:C8VBC3
EnsemblFungi:CADANIAT00000540 Uniprot:C8VBC3
Length = 607
Score = 103 (41.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCT 143
H+ +IF + W K+ +TAS D+T+KIWDAE K T
Sbjct: 227 HKGSIFAVSWSKDSRKFVTASADKTVKIWDAEAGKVT 263
Score = 98 (39.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKS-HDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
N +HI+SG+ D N +VW + P D +++ + H V V W K+ ++ D V+
Sbjct: 542 NGAHIVSGALDTNIFVWSLTNP-GDWLQVSNAHKEGVNGVAWIAG-GSKVASAGADAAVK 599
Query: 390 LWSLE 394
+W +E
Sbjct: 600 VWKVE 604
Score = 77 (32.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ S + G S G V++V + +H +T++ W N A IV+ + D +
Sbjct: 498 PDGSKLAIGDSRGRVLVYKVADGSLVNDRWTAHTSRITSIAWNDNGA-HIVSGALDTNIF 556
Query: 390 LWSLEN 395
+WSL N
Sbjct: 557 VWSLTN 562
Score = 70 (29.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGAL-MG-HTGSIKSLCSHPTNSD 164
H N I+ + + + + +++ D+ I ++D + + G + G H GSI ++ S +S
Sbjct: 183 HTNYIYGVGFSPDGSTLVSVGADRKIWLYDGKSGEVKGQIGEGEHKGSIFAV-SWSKDSR 241
Query: 165 ILVSGSRDGSFAIWD 179
V+ S D + IWD
Sbjct: 242 KFVTASADKTVKIWD 256
>FB|FBgn0031431 [details] [associations]
symbol:CG3515 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AY089469
ProteinModelPortal:Q8T3W2 SMR:Q8T3W2 PRIDE:Q8T3W2
FlyBase:FBgn0031431 eggNOG:NOG238696 InParanoid:Q8T3W2
OrthoDB:EOG4W0VVH ArrayExpress:Q8T3W2 Bgee:Q8T3W2 Uniprot:Q8T3W2
Length = 395
Score = 126 (49.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 115 CWIKEDTNIL--TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
C++++DT +L T+ D TI+ D + C GH +I L S P ++ +S RD
Sbjct: 71 CFVQQDTRVLHSTSKHDYTIRCLDLNTRHCVRVFGGHAKTINRLASQPGGENVFISAGRD 130
Query: 173 GSFAIWDLRCKS 184
+WD+R K+
Sbjct: 131 DQVYMWDIRVKT 142
Score = 68 (29.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 38/160 (23%), Positives = 70/160 (43%)
Query: 235 IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCM 294
+AT+S I + D R + + ++ + + ++ A T+L NG L S
Sbjct: 164 LATSSGTEGI-QIRDVRMMGGEPSRKFVYQVNAKANWTQLQFAP------NGKSLLLST- 215
Query: 295 DHRIYLYNVLQLDKGPIQHFSGCRIE-SFYVKSEICPNASHILSGSSDGNAYVWQVNKPQ 353
DH + ++V +D Q F+G + + + P++ ILSG+ G ++W+
Sbjct: 216 DHS-WCFSVSAIDGTYQQSFTGYSNKLRLPLDATYTPDSQFILSGADKGRIHIWRA--AD 272
Query: 354 ADPIK-LKSHD-GEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
P+ LK ++ G V + + P + SSD V W
Sbjct: 273 GFPVAVLKGNNMGPVRCMRFNPRAT--MFVSSDSRIV-FW 309
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVEDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 117 (46.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 104 (41.7 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 35/137 (25%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 42 (19.8 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 78/286 (27%), Positives = 124/286 (43%)
Query: 122 NILTASG-DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
NIL + G D+ +++W+ + L GHT +++ C ++ + +SGSRD + IWDL
Sbjct: 303 NILVSGGCDREVRVWNMATGESIYLLRGHTSTVR--CLKMSDKNTAISGSRDTTLRIWDL 360
Query: 181 R---CKSSPKSNCAES---FVFSSAVVKG-----AHLLSQSK-RVSRRKAASMS-ITSVL 227
R C+S + A V VV G A + S S+ R R + S I ++
Sbjct: 361 RTGTCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVWSISEGRFLRALSGHFSQIYAIA 420
Query: 228 YLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ D IAT S +++ V+ WD + HA T L G +S D+
Sbjct: 421 F--DGRRIATGS-LDTSVRIWDPNTGQC-------HAILQG--HTSLVGQLQMSGDT--- 465
Query: 288 FLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
L D + ++++ ++ PI H S V S N + I+SG SDG VW
Sbjct: 466 -LVTGGSDGSVRVWSLTRM--API-HRLAAHDNS--VTSLQFDN-NRIVSGGSDGRVKVW 518
Query: 348 QVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV-RLWS 392
+ Q +L + V V + E I++S TV +WS
Sbjct: 519 CLRTGQLLR-ELSTPSDTVWRVTF-EEEKAVIMSSRSGRTVMEVWS 562
Score = 115 (45.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 115 CWIKEDTNI-LTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDG 173
C D N ++ S D T++IWD C L+GH S++ L H DI+VSGS D
Sbjct: 337 CLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVH---GDIVVSGSYDT 393
Query: 174 SFAIWDL 180
+ +W +
Sbjct: 394 TARVWSI 400
Score = 85 (35.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+++G SDG+ VW + + PI +L +HD VT++ + N +IV+ D V++W L
Sbjct: 466 LVTGGSDGSVRVWSLTRMA--PIHRLAAHDNSVTSLQFDNN---RIVSGGSDGRVKVWCL 520
Score = 68 (29.0 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
I +GS D + +W N Q I L+ H + V +VT D +VR+WSL
Sbjct: 426 IATGSLDTSVRIWDPNTGQCHAI-LQGH---TSLVGQLQMSGDTLVTGGSDGSVRVWSL 480
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 135 (52.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 275 HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC---PN 331
H I + S +S + + ++L+++ DK ++ F G R +F + S C N
Sbjct: 488 HPIMTFSINSADRLALLNVSNQGLHLWDIE--DKCLVRRFQGIRQSNFAIHS--CFGGVN 543
Query: 332 ASHILSGSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
S + SGS D Y+W + + + P+ KL H V V+W P + ++SDD TVR+
Sbjct: 544 ESFVASGSEDKVVYIWHIKREE--PLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRI 601
Query: 391 W 391
W
Sbjct: 602 W 602
Score = 64 (27.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/102 (25%), Positives = 39/102 (38%)
Query: 86 LPSFACHRENAEKARISDWVAHQNAIFDLCWIKED-TNILTASGDQTIKIWDAEKKKCT- 143
L C + I H + ++ C D + T S D T+ IWD + K T
Sbjct: 292 LTDHCCTTDGFPMQTIQILTDHCDEVW-FCKFSPDGLKLATGSKDSTVIIWDVDPYKLTL 350
Query: 144 ---GALMGHTG-SIKSLCSHPTNSDILVSGSRDG-SFAIWDL 180
L G S+ + P + ILV G+ D IW++
Sbjct: 351 KHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHELYIWNV 392
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 20/88 (22%), Positives = 36/88 (40%)
Query: 56 VSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLC 115
V FCK S + A +D V ++D P ++ + R+ D A + F +
Sbjct: 317 VWFCKFSPDGLKLATGSKDSTVIIWDVD---P----YKLTLKHRRVLDGQAQLSVSF-VS 368
Query: 116 WIKEDTNILTASGDQT--IKIWDAEKKK 141
W + IL + + + IW+ + K
Sbjct: 369 WSPDSKLILVGGTEDSHELYIWNVDDGK 396
Score = 38 (18.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 11/47 (23%), Positives = 20/47 (42%)
Query: 127 SGDQTIKIWDAEKKKCTGALMGHTGSIKS-LCSHPTNSDILVSGSRD 172
SGD ++ I D + A GH + ++ +S +V G +
Sbjct: 36 SGDDSVGIGDENPSGSSAATNGHDSKHNGFIVNNNGSSSRIVDGENN 82
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIW 178
DIL S S D + ++
Sbjct: 161 DILASASYDNTIKMF 175
Score = 94 (38.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 87 (35.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+H+ +V AV W P AG++++ SDD T+++W +
Sbjct: 301 AHEQDVNAVEWNPAVAGQLISCSDDGTIKIWKV 333
Score = 79 (32.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK-----KCTGALMGHTGSIKSLCSHP 160
AH + + W + +AS D TIK++ AE + CT L HT ++ S+
Sbjct: 146 AHTQDVKRVVWHPTKDILASASYDNTIKMF-AESQLDSDWDCTATLSSHTSTVWSI-DFD 203
Query: 161 TNSDILVSGSRDGSFAIW 178
D LVS S D + IW
Sbjct: 204 AEGDRLVSCSDDKTLKIW 221
Score = 74 (31.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 24/88 (27%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I++W T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
+HQ + W+ ++TAS D+T ++D E + +L GH + C+HPT +
Sbjct: 281 SHQGVVIAADWLVGGKQVVTASWDRTANLYDVETSELVHSLTGHDQELTHCCTHPTQR-L 339
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+V+ SRD +F +WD R P + F + V A VS ++ +
Sbjct: 340 VVTSSRDTTFRLWDFR---DPSIHSVNVFQGHTDTVTSAVFTVGDNVVSGSDDRTVKVWD 396
Query: 226 VLYLKDEVS-IATASAVNSI 244
+ ++ ++ I T SA+N I
Sbjct: 397 LKNMRSPIATIRTDSAINRI 416
Score = 120 (47.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
+ +++ H++ I+D+ + +L TAS D T +W E KC GH GS+ S+ H
Sbjct: 149 VKEYIGHRDGIWDVSVTRTQPIVLGTASADHTALLWSIETGKCLVKYAGHVGSVNSIKFH 208
Query: 160 PTNSDILVSGSRDGSFAIW 178
P+ + ++ S D + IW
Sbjct: 209 PSEQ-LALTASGDQTAHIW 226
Score = 77 (32.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKL-KSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P +++ S D +W P + + + H VT+ + + +V+ SDD TV
Sbjct: 335 PTQRLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGD--NVVSGSDDRTV 392
Query: 389 RLWSLEN 395
++W L+N
Sbjct: 393 KVWDLKN 399
Score = 68 (29.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVT-S 382
V S + +++SGS D VW + K PI D + +N C + KI+
Sbjct: 372 VTSAVFTVGDNVVSGSDDRTVKVWDL-KNMRSPIATIRTDSAINRINVCVGQ--KIIALP 428
Query: 383 SDDYTVRLWSL 393
D+ VRL+ +
Sbjct: 429 HDNRQVRLFDM 439
Score = 66 (28.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 359 LKSHDGEVTAVNWCPNEAGK-IVTSSDDYTVRLWSLE 394
LKSH G V A +W GK +VT+S D T L+ +E
Sbjct: 279 LKSHQGVVIAADWLVG--GKQVVTASWDRTANLYDVE 313
Score = 43 (20.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 222 SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQI 257
++TS ++ + ++ + S + VK WD +N+++ I
Sbjct: 371 TVTSAVFTVGD-NVVSGSD-DRTVKVWDLKNMRSPI 404
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 106 (42.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 92 HRENAEKA-RISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALM-- 147
H E+ + R DW +A+FD+ W + + ++L T SGD ++++WD G L
Sbjct: 53 HNESGLRIFRSFDWT---DALFDVTWSENNEHVLVTCSGDGSLQLWDTAG--AAGPLQVY 107
Query: 148 -GHTGSIKSL-CSHPTNSDILVSGSRDGSFAIWD 179
HT + S+ S ++VSGS D + +WD
Sbjct: 108 KEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWD 141
Score = 104 (41.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/121 (23%), Positives = 49/121 (40%)
Query: 61 TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKED 120
+ N H+ DG + L+D+ ++E+ ++ DW Q + +
Sbjct: 76 SENNEHVLVTCSGDGSLQLWDTAGAAGPLQVYKEHTQEVYSVDW--SQT--------RGE 125
Query: 121 TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
+++ S DQT+K+WD + GH I S P S S D + IWD+
Sbjct: 126 QLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDV 185
Query: 181 R 181
+
Sbjct: 186 K 186
Score = 86 (35.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
S S D +W V K I + +H E+ + +WC +VT + D ++R W L N
Sbjct: 173 SASGDQTLRIWDV-KTTGVRIVVPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRN 230
Score = 70 (29.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N + +++G+ D + W + + +L H + V + P A + + S D+TVR
Sbjct: 210 NENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASCSYDFTVRF 269
Query: 391 WS 392
W+
Sbjct: 270 WN 271
>UNIPROTKB|Q96S15 [details] [associations]
symbol:WDR24 "WD repeat-containing protein 24" species:9606
"Homo sapiens" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471112
GO:GO:0016558 EMBL:AE006464 EMBL:Z92544 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 OMA:HALYDSR OrthoDB:EOG48WC1D EMBL:AL136863
EMBL:BC008025 EMBL:BC009761 IPI:IPI00031042 IPI:IPI00045472
RefSeq:NP_115635.1 UniGene:Hs.459632 ProteinModelPortal:Q96S15
SMR:Q96S15 IntAct:Q96S15 MINT:MINT-1444376 STRING:Q96S15
PhosphoSite:Q96S15 DMDM:74762692 PaxDb:Q96S15 PRIDE:Q96S15
DNASU:84219 Ensembl:ENST00000248142 Ensembl:ENST00000293883
GeneID:84219 KEGG:hsa:84219 UCSC:uc002ciz.1 GeneCards:GC16M000734
HGNC:HGNC:20852 HPA:HPA039506 neXtProt:NX_Q96S15
PharmGKB:PA134918496 InParanoid:Q96S15 PhylomeDB:Q96S15
GenomeRNAi:84219 NextBio:73642 Bgee:Q96S15 CleanEx:HS_WDR24
Genevestigator:Q96S15 GermOnline:ENSG00000127580 Uniprot:Q96S15
Length = 920
Score = 114 (45.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 113 DLCWIKEDTNIL-TASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNSDILVS 168
D+ W + D N+L TA+ + + W+ + K H ++ +C HPT + +L+S
Sbjct: 141 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 200
Query: 169 GSRDGSFAIWDLRCKSSPKSNCAES 193
GS+DG +DLR K S + E+
Sbjct: 201 GSQDGFMKCFDLRRKDSVSTFSGEA 225
Score = 90 (36.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+GN +W + +P +H+G V +W P + G + T D V++W +
Sbjct: 315 NGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDM 367
Score = 69 (29.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 330 PNASHILSGSS---DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGKIVTSSDD 385
P H L+ S D N YVW V +P + H T + W P++ +++ S D
Sbjct: 391 PECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKD 450
>UNIPROTKB|Q9XSC3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9913
"Bos taurus" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 EMBL:AF117897
IPI:IPI00717067 RefSeq:NP_777199.1 UniGene:Bt.216 HSSP:P38262
ProteinModelPortal:Q9XSC3 STRING:Q9XSC3 PRIDE:Q9XSC3 GeneID:286825
KEGG:bta:286825 CTD:54521 HOGENOM:HOG000267152 HOVERGEN:HBG080376
InParanoid:Q9XSC3 OrthoDB:EOG4K6G3H NextBio:20806479 Uniprot:Q9XSC3
Length = 912
Score = 112 (44.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + DL W K + +L++S D+T+++W +++C H + ++ HP +
Sbjct: 605 HTADLLDLSWSK-NYFLLSSSMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYF 662
Query: 167 VSGSRDGSFAIWDL 180
+SGS DG +W++
Sbjct: 663 LSGSLDGKLRLWNI 676
Score = 92 (37.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 247 FWDTRNLKAQITQAWPHAESSSAKET---RLHGISSLSQDSNGVFLTASCMDHRIYLYNV 303
F+DT +LK TQ H S+ + ++ GI L + N + +T++ D RI LY++
Sbjct: 717 FYDTEHLKYH-TQI--HVRSTRGRNKVGRKITGIEPLPGE-NKILVTSN--DSRIRLYDL 770
Query: 304 LQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ----------VNKPQ 353
L + G S +K+ + ++++SGS D Y+W V + +
Sbjct: 771 RDLSLS--MKYKGYVNSSSQIKASFSHDFNYLVSGSEDKYVYIWSTYHDLSKFTSVRRDR 828
Query: 354 ADPIK-LKSHDGEVTAVNWCPN 374
D + +K+H+ VT+ + PN
Sbjct: 829 NDFWEGIKAHNAVVTSAIFAPN 850
Score = 60 (26.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 288 FLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
FL+ S +D ++ L+N+ G + C N + + G+ DG +
Sbjct: 662 FLSGS-LDGKLRLWNIPDKKVALWNEVDGQT--KLITAANFCQNGKYAVIGTYDGRCIFY 718
Query: 348 QVNKPQADP-IKLKSHDG------EVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ I ++S G ++T + P E KI+ +S+D +RL+ L +
Sbjct: 719 DTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGE-NKILVTSNDSRIRLYDLRD 772
>UNIPROTKB|F1S3R7 [details] [associations]
symbol:AHI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072372 "primary cilium" evidence=ISS] [GO:0005912
"adherens junction" evidence=ISS] [GO:0005911 "cell-cell junction"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0031513
"nonmotile primary cilium" evidence=ISS] [GO:0005932 "microtubule
basal body" evidence=ISS] [GO:0005929 "cilium" evidence=ISS]
[GO:0005814 "centriole" evidence=ISS] [GO:0060271 "cilium
morphogenesis" evidence=ISS] [GO:0050795 "regulation of behavior"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0035845 "photoreceptor cell outer segment organization"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0007169 "transmembrane receptor protein tyrosine
kinase signaling pathway" evidence=ISS] [GO:0002092 "positive
regulation of receptor internalization" evidence=ISS] [GO:0070986
"left/right axis specification" evidence=ISS] [GO:0070121
"Kupffer's vesicle development" evidence=ISS] [GO:0039023
"pronephric duct morphogenesis" evidence=ISS] [GO:0035844 "cloaca
development" evidence=ISS] [GO:0001947 "heart looping"
evidence=ISS] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0071599 "otic vesicle development" evidence=ISS] [GO:0065001
"specification of axis polarity" evidence=ISS] [GO:0039008
"pronephric nephron tubule morphogenesis" evidence=ISS] [GO:0030902
"hindbrain development" evidence=ISS] [GO:0030862 "positive
regulation of polarized epithelial cell differentiation"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0007417 "central nervous system development" evidence=ISS]
[GO:0001738 "morphogenesis of a polarized epithelium" evidence=ISS]
[GO:0033365 "protein localization to organelle" evidence=IEA]
Pfam:PF00018 InterPro:IPR017986 InterPro:IPR001452
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PRINTS:PR00452
PROSITE:PS50002 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00326 GO:GO:0043066 GO:GO:0034613 GO:GO:0005814
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0050795
GO:GO:0045944 GO:GO:0005911 GO:GO:0007169 SUPFAM:SSF50044
GO:GO:0005912 GO:GO:0033365 OMA:FKGIPIS GO:GO:0005932 GO:GO:0042384
GO:GO:0035844 GO:GO:0001947 GO:GO:0030902 GO:GO:0070121
GO:GO:0070986 GO:GO:0001738 GO:GO:0071599 GO:GO:0035845
GO:GO:0030862 GO:GO:0002092 GO:GO:0039023 GO:GO:0039008
GO:GO:0010842 GO:GO:0065001 GO:GO:0031513
GeneTree:ENSGT00530000063479 EMBL:CU633228 EMBL:CU695061
Ensembl:ENSSSCT00000004605 Uniprot:F1S3R7
Length = 1188
Score = 144 (55.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 43/134 (32%), Positives = 60/134 (44%)
Query: 58 FCKT-SKNSHIFAVS--DEDGY-VSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
FC S N I A + DGY + L++ +PS RE H N I+D
Sbjct: 608 FCLAFSHNGRILAAACASRDGYPIILYE----IPSGRFMRELC---------GHLNIIYD 654
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKC-TGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
LCW +D ILTAS D T +IW E T ++ H + + HP +++V+G D
Sbjct: 655 LCWSNDDRYILTASSDGTARIWKNEINNTNTFRVLPHPSFVYTAKFHPAVKELVVTGCYD 714
Query: 173 GSFAIWDLRCKSSP 186
IW + K P
Sbjct: 715 SVIRIWKVDMKEDP 728
Score = 61 (26.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/107 (22%), Positives = 43/107 (40%)
Query: 244 IVKFWDTRNLKAQITQAWPH-AESSSAKETRLHGI--SSLSQDSNGVFLTASCMDHRIYL 300
++ W+T + + H + + KE+ GI S L NG L D + +
Sbjct: 763 VIVVWNTYVKVNDVQHSVRHWSVNKEIKESEFKGIPISYLEVHPNGKRLLIHTKDSTLRI 822
Query: 301 YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
++ L + F G + S + P + + +GS DG +VW
Sbjct: 823 MDLRIL---AARKFVGAANYREKIHSTLTPCGTFLFAGSEDGVVFVW 866
>UNIPROTKB|Q5JSH3 [details] [associations]
symbol:WDR44 "WD repeat-containing protein 44" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005794 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010008 GO:GO:0030334
GO:GO:0005874 HSSP:P38262 CTD:54521 HOVERGEN:HBG080376
OrthoDB:EOG4K6G3H EMBL:AK001978 EMBL:AK092077 EMBL:AK127556
EMBL:AM393332 EMBL:AM393787 EMBL:BX537578 EMBL:BX538087
EMBL:AL391474 EMBL:AL391803 EMBL:AL391830 EMBL:BC028697
IPI:IPI00444371 IPI:IPI00807730 IPI:IPI00872729
RefSeq:NP_001171894.1 RefSeq:NP_001171895.1 RefSeq:NP_061918.3
UniGene:Hs.98510 ProteinModelPortal:Q5JSH3 SMR:Q5JSH3 IntAct:Q5JSH3
STRING:Q5JSH3 PhosphoSite:Q5JSH3 DMDM:74762196 PaxDb:Q5JSH3
PRIDE:Q5JSH3 DNASU:54521 Ensembl:ENST00000254029
Ensembl:ENST00000371825 GeneID:54521 KEGG:hsa:54521 UCSC:uc004eqn.3
UCSC:uc004eqo.3 GeneCards:GC0XP117480 H-InvDB:HIX0017006
HGNC:HGNC:30512 HPA:HPA038084 neXtProt:NX_Q5JSH3
PharmGKB:PA128394668 InParanoid:Q5JSH3 OMA:KTDHTEV PhylomeDB:Q5JSH3
GenomeRNAi:54521 NextBio:56920 ArrayExpress:Q5JSH3 Bgee:Q5JSH3
CleanEx:HS_WDR44 Genevestigator:Q5JSH3 GermOnline:ENSG00000131725
Uniprot:Q5JSH3
Length = 913
Score = 112 (44.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + DL W K + +L++S D+T+++W +++C H + ++ HP +
Sbjct: 606 HTADLLDLSWSK-NYFLLSSSMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRYF 663
Query: 167 VSGSRDGSFAIWDL 180
+SGS DG +W++
Sbjct: 664 LSGSLDGKLRLWNI 677
Score = 92 (37.4 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 247 FWDTRNLKAQITQAWPHAESSSAKET---RLHGISSLSQDSNGVFLTASCMDHRIYLYNV 303
F+DT +LK TQ H S+ + ++ GI L + N + +T++ D RI LY++
Sbjct: 718 FYDTEHLKYH-TQI--HVRSTRGRNKVGRKITGIEPLPGE-NKILVTSN--DSRIRLYDL 771
Query: 304 LQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ----------VNKPQ 353
L + G S +K+ + ++++SGS D Y+W V + +
Sbjct: 772 RDLSLS--MKYKGYVNSSSQIKASFSHDFTYLVSGSEDKYVYIWSTYHDLSKFTSVRRDR 829
Query: 354 ADPIK-LKSHDGEVTAVNWCPN 374
D + +K+H+ VT+ + PN
Sbjct: 830 NDFWEGIKAHNAVVTSAIFAPN 851
Score = 60 (26.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 25/115 (21%), Positives = 48/115 (41%)
Query: 288 FLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
FL+ S +D ++ L+N+ G + C N + + G+ DG +
Sbjct: 663 FLSGS-LDGKLRLWNIPDKKVALWNEVDGQT--KLITAANFCQNGKYAVIGTYDGRCIFY 719
Query: 348 QVNKPQADP-IKLKSHDG------EVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ I ++S G ++T + P E KI+ +S+D +RL+ L +
Sbjct: 720 DTEHLKYHTQIHVRSTRGRNKVGRKITGIEPLPGE-NKILVTSNDSRIRLYDLRD 773
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 117 (46.2 bits), Expect = 0.00082, P = 0.00082
Identities = 31/130 (23%), Positives = 52/130 (40%)
Query: 67 IFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTA 126
+FA D + ++D R P AC A AH + + W + + +L+
Sbjct: 275 VFASCSADASIRIWDIRAA-PGKACMLTTA--------AAHDGDVNVISWSRREPFLLSG 325
Query: 127 SGDQTIKIWDAEKKKC---TGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCK 183
D T+K+WD + K H + S+ HP +S + + D WDL +
Sbjct: 326 GDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVE 385
Query: 184 SSPKSNCAES 193
P+S E+
Sbjct: 386 RDPESGETET 395
Score = 100 (40.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 47/187 (25%), Positives = 77/187 (41%)
Query: 32 VVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC 91
+V + I V V GEE P+A + + + +FA+ + + D + L F
Sbjct: 144 MVPHYGGINRVRVSWLGEE--PVAGVWSEKGQ-VEVFALRR---LLQVVDDPQALAIFL- 196
Query: 92 HRENAEKARISDWVAHQNAIFDLCWI-KEDTNILTASGDQTIKIWDAEKKKCTGA----L 146
E A I + H F L W + +LT + I +W
Sbjct: 197 RDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVDQRPF 256
Query: 147 MGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKG-AH 205
+GHT S++ L PT + S S D S IWD+R ++P C + ++A G +
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR--AAPGKAC---MLTTAAAHDGDVN 311
Query: 206 LLSQSKR 212
++S S+R
Sbjct: 312 VISWSRR 318
Score = 97 (39.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 335 ILSGSSDGNAYVWQVNK-PQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSG DG VW + + P+ K H VT+V W P ++G S D + W
Sbjct: 322 LLSGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
Query: 393 L 393
L
Sbjct: 382 L 382
>UNIPROTKB|I3LF05 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:FP016225 ProteinModelPortal:I3LF05 Ensembl:ENSSSCT00000028633
Uniprot:I3LF05
Length = 928
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 113 DLCWIKEDTNIL-TASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNSDILVS 168
D+ W + D N+L TA+ + + W+ + K H ++ +C HPT + +L+S
Sbjct: 140 DVVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLS 199
Query: 169 GSRDGSFAIWDLRCKSSPKSNCAES 193
GS+DG +DLR K S + E+
Sbjct: 200 GSQDGFMKCFDLRRKDSVSTFSGEA 224
Score = 90 (36.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+GN +W + +P +H+G V +W P + G + T D V++W +
Sbjct: 323 NGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDM 375
Score = 73 (30.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 330 PNASHILSGSS---DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGKIVTSSDD 385
P H L+ S D N YVW V +P + H T + W P++ +++ S D
Sbjct: 399 PECRHHLATCSMMVDHNIYVWDVRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKD 458
Query: 386 YTV 388
T+
Sbjct: 459 STL 461
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 71/278 (25%), Positives = 121/278 (43%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPTNSDILVSGSRDGSFAIWDL 180
ILT S D+T +IW E K ++GHT +K + + S +L+S S D + +W+
Sbjct: 114 ILTGSYDKTSRIWSLEGKSIM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW 172
Query: 181 RC-KSSPKS-NCAESFVFS--SAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIA 236
++ K+ +C S S V G S +K S + I S + +E +
Sbjct: 173 NVERNKVKALHCCRGHAGSVDSIAVDG----SGTKFCSGSWDKMLKIWSTVPTDEEDEME 228
Query: 237 TASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDH 296
++ N K T L +T+ P S E +SS+ +AS DH
Sbjct: 229 EST--NRPRKKQKTEQLG--LTRT-PIVTLSGHMEA----VSSVLWSDAEEICSAS-WDH 278
Query: 297 RIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQAD 355
I +++V + G ++ +G ++ + S +C + SGS+D + +W
Sbjct: 279 TIRVWDV---ESGSLKSTLTGNKVFNCISYSPLC---KRLASGSTDRHIRLWDPRTKDGS 332
Query: 356 PIKLK--SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ L SH G VT+V W P ++++ S D V+LW
Sbjct: 333 LVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 72/293 (24%), Positives = 120/293 (40%)
Query: 105 VAHQNAIFDLCWIKEDTN---ILTASGDQTIKIWD----AEKKKCTGALMGHTGSIKSLC 157
V H + + D+ W+K+D+ +L+AS DQTI +W+ K K GH GS+ S+
Sbjct: 137 VGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIA 196
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL-LSQSKRVSRR 216
+ + SGS D IW + + ES K L L+++ V+
Sbjct: 197 VDGSGTKFC-SGSWDKMLKIWST-VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTL- 253
Query: 217 KAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG 276
+++SVL+ D I +AS WD + W ES S K T L G
Sbjct: 254 SGHMEAVSSVLW-SDAEEICSAS--------WD------HTIRVWD-VESGSLKST-LTG 296
Query: 277 ---ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP-NA 332
+ +S L + D I L++ D G + S + + P +
Sbjct: 297 NKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKD-GSLVSLSLTSHTGWVTSVKWSPTHE 355
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
++SGS D +W +A L +H+ +V +V+W + G +++ D
Sbjct: 356 QQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW--TDTGLLLSGGAD 406
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 150 (57.9 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 71/278 (25%), Positives = 121/278 (43%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPTNSDILVSGSRDGSFAIWDL 180
ILT S D+T +IW E K ++GHT +K + + S +L+S S D + +W+
Sbjct: 114 ILTGSYDKTSRIWSLEGKSIM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW 172
Query: 181 RC-KSSPKS-NCAESFVFS--SAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIA 236
++ K+ +C S S V G S +K S + I S + +E +
Sbjct: 173 NVERNKVKALHCCRGHAGSVDSIAVDG----SGTKFCSGSWDKMLKIWSTVPTDEEDEME 228
Query: 237 TASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDH 296
++ N K T L +T+ P S E +SS+ +AS DH
Sbjct: 229 EST--NRPRKKQKTEQLG--LTRT-PVVTLSGHMEA----VSSVLWSDAEEICSAS-WDH 278
Query: 297 RIYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQAD 355
I +++V + G ++ +G ++ + S +C + SGS+D + +W
Sbjct: 279 TIRVWDV---ESGSLKSTLTGNKVFNCISYSPLC---KRLASGSTDRHIRLWDPRTKDGS 332
Query: 356 PIKLK--SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ L SH G VT+V W P ++++ S D V+LW
Sbjct: 333 LVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 71/292 (24%), Positives = 115/292 (39%)
Query: 105 VAHQNAIFDLCWIKEDTN---ILTASGDQTIKIWD----AEKKKCTGALMGHTGSIKSLC 157
V H + + D+ W+K+D+ +L+AS DQTI +W+ K K GH GS+ S+
Sbjct: 137 VGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIA 196
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK 217
+ + SGS D IW + + ES K L V
Sbjct: 197 VDGSGTKFC-SGSWDKMLKIWST-VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPVVTLS 254
Query: 218 AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG- 276
+++SVL+ D I +AS WD + W ES S K T L G
Sbjct: 255 GHMEAVSSVLW-SDAEEICSAS--------WD------HTIRVWD-VESGSLKST-LTGN 297
Query: 277 --ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICP-NAS 333
+ +S L + D I L++ D G + S + + P +
Sbjct: 298 KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKD-GSLVSLSLTSHTGWVTSVKWSPTHEQ 356
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDD 385
++SGS D +W +A L +H+ +V +V+W + G +++ D
Sbjct: 357 QLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW--TDTGLLLSGGAD 406
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 72/301 (23%), Positives = 117/301 (38%)
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC-SHPTNSDILVSG 169
IF L W E ++T + +W+ L H S++++ SH N +V+G
Sbjct: 149 IFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSH--NDSWMVTG 206
Query: 170 SRDGSFAIWDLRCKS----SPKSNCAESFVFS---SAVVKGAH---------LLSQSKRV 213
G W + FS S V G+ + Q +RV
Sbjct: 207 DHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERV 266
Query: 214 SRRKAASMSITSVLYLKDEVSIATASAVNSI-VKFWDTRNLKAQITQAWPHAESSSAKET 272
R A + V + + I + S N +K WD K+ I A HA S+
Sbjct: 267 LRGHGAD--VKCVHWHPQKGMIVSGSKDNQQPIKIWDP---KSGIALATLHAHKST---- 317
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
+ L + NG +L + DH + L+++ L + +Q F G + E+ V +
Sbjct: 318 ----VMDLKWNDNGNWLVTASRDHLLKLFDIRNL-REEVQVFRGHKKEASSVSWHPI-HE 371
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLW 391
SG SDG+ W V + +HD V + W P G I+ S S+D+T++ W
Sbjct: 372 GLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHP--LGHILCSGSNDHTIKFW 429
Query: 392 S 392
+
Sbjct: 430 T 430
Score = 122 (48.0 bits), Expect = 0.00053, P = 0.00053
Identities = 71/291 (24%), Positives = 118/291 (40%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH ++ + W D+ ++T +K W + H +I+ + PT+S
Sbjct: 186 AHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVK-MYQAHKEAIRGISFSPTDSKF 244
Query: 166 LVSGSRDGSFAIWD-LRCKSS-------PKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK 217
VSGS DG+ IWD +RC+ C +V G+ Q ++ K
Sbjct: 245 -VSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPK 303
Query: 218 AASMSIT------SVLYLK--DEVS-IATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
+ T +V+ LK D + + TAS + ++K +D RNL+ ++ H + +S
Sbjct: 304 SGIALATLHAHKSTVMDLKWNDNGNWLVTASR-DHLLKLFDIRNLREEVQVFRGHKKEAS 362
Query: 269 AKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY---VK 325
+ H I G+F + D I +NV DK GC +E+ + V
Sbjct: 363 S--VSWHPIHE------GLFCSGGS-DGSILFWNV-GTDKE-----IGC-VETAHDSIVW 406
Query: 326 SEICPNASHIL-SGSSDGNAYVWQVNKP---QADPIKLKSHDGEVTAVNWC 372
+ HIL SGS+D W N+P D L + + A++ C
Sbjct: 407 TLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDEC 457
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 173 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLT 228
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 229 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 278
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 279 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 337
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 338 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 392
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 393 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 448
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 449 LQF---DEFQIISSSHDDTILIWDFLN 472
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 132 (51.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/135 (29%), Positives = 64/135 (47%)
Query: 56 VSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLC 115
V C + N A D S+F+ L S A N +RI H+ +
Sbjct: 111 VMTCAFAPNGQSVACGGLDSACSIFN----LNSQADRDGNIPVSRIL--TGHKGYVSSCQ 164
Query: 116 WIKE-DTNILTASGDQTIKIWDA---EKKKCTGALM--GHTGSIKSLCSHPTNSDILVSG 169
++ + +T ++T+SGDQT +WD ++ G GHT + SL + +NS++ VSG
Sbjct: 165 YVPDQETRLITSSGDQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSG 224
Query: 170 SRDGSFAIWDLRCKS 184
S D + +WD+R S
Sbjct: 225 SCDATVRLWDIRIAS 239
Score = 86 (35.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 21/91 (23%), Positives = 42/91 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++ L W E I++AS D + +W+A + T A+ H + + C+ N +
Sbjct: 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMT-CAFAPNGQSV 123
Query: 167 VSGSRDGSFAIWDLRCKSSPKSNCAESFVFS 197
G D + +I++L ++ N S + +
Sbjct: 124 ACGGLDSACSIFNLNSQADRDGNIPVSRILT 154
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
N++ +SGS D +W + H+G++ +V + P + + T SDD T RL
Sbjct: 217 NSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRL 275
Query: 391 WSL 393
+ +
Sbjct: 276 FDV 278
Score = 60 (26.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKL----KSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
+ +G S+G+ YVW + + L SH+G ++ + ++ + T S D +++
Sbjct: 313 LFAGYSNGDCYVWDTLLAEV-VLNLGNLQNSHEGRISCLG-LSSDGSALCTGSWDKNLKI 370
Query: 391 WS 392
W+
Sbjct: 371 WA 372
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 151 (58.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 207 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLT 262
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 263 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 312
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 313 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 371
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 372 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 426
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 427 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 483 LQF---DEFQIISSSHDDTILIWDFLN 506
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 116 (45.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS SRD + +W+++
Sbjct: 208 VSASRDKTIKMWEVQ 222
Score = 103 (41.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 27/91 (29%), Positives = 44/91 (48%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + T +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 97 (39.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 35/137 (25%), Positives = 55/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S S D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/78 (23%), Positives = 37/78 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ + C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 VSG-SRDGSFAIWDLRCK 183
++ S D + +W + K
Sbjct: 249 IASCSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W ++ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDISTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDF 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
Score = 65 (27.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 40/174 (22%), Positives = 71/174 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AWPHAESSSAKETRLHGISS 279
+D IA+ S + V+ W T+ KA++ + +W ESS + + G +
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWA-PESSYSTISEATGSET 301
Query: 280 LSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHILS 337
G FL + D I ++++ + H + R F+ ILS
Sbjct: 302 KKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFH------SGGKFILS 355
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 356 CADDKTLRVWDFKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 42 (19.8 bits), Expect = 0.00095, Sum P(2) = 0.00094
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 320 ESFYVKSEICPNASHILSGSSDGNAYVWQ 348
E F + A ++++GS D VW+
Sbjct: 380 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
R+S +A C +D I+T+SGD T +WD E + T GHTG + SL
Sbjct: 34 RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA 93
Query: 160 PTNSDILVSGSRDGSFAIWDLR 181
P ++ + VSG+ D S +WD+R
Sbjct: 94 P-DTRLFVSGACDASAKLWDVR 114
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 151 (58.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 222 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLT 277
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 278 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 327
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 328 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 386
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 441
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 442 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 498 LQF---DEFQIISSSHDDTILIWDFLN 521
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 102 (41.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK---KCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + T S D+++ IW+ +++ +C + HT +K + HPT
Sbjct: 104 HENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQ- 162
Query: 164 DILVSGSRDGSFAIW 178
++L S S D + ++
Sbjct: 163 ELLASCSYDNNVCVY 177
Score = 91 (37.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKK--KCTGALMGHTGSIKSLCSHPTNSD 164
HQ A+ + W + +AS D T IW + +C L GH +K + P+ +
Sbjct: 60 HQRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQ 119
Query: 165 ILVSGSRDGSFAIWDL 180
L + SRD S IW++
Sbjct: 120 -LATCSRDKSVWIWEV 134
Score = 90 (36.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 265 ESSSAKETRLHGISSLSQDSNGVFLTASCMDHR-IYLYNVLQLDKGPIQHFSG-CRIESF 322
E + E + L+ D +G L ASC D R + ++ Q G + C + F
Sbjct: 185 ECRATLEGHTSTVWGLTFDPSGQRL-ASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGF 243
Query: 323 YVKS--EI--CPNASHILSGSSDGNAYVWQVNKPQADP----IKL-----KSHDGEVTAV 369
+ ++ +I CP + + D V++ ++ ADP L K+H +V +
Sbjct: 244 HGRTVYDIAWCPLTGALATACGDDGVRVFKEDET-ADPDQPVFSLSAHVPKAHSQDVNCI 302
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
W P EAG +V+ SD+ + +W+ ++
Sbjct: 303 AWHPKEAGLLVSCSDNGEIAVWNYQS 328
Score = 80 (33.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 99 ARISDWVAHQNA-IFDLCWIKEDTNILTASGDQTIKIW--DAEKKKCTGALM-GHTGSIK 154
A + + AH ++ + + W + T + + GD+ I+IW + + +C L GH +++
Sbjct: 6 ALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVR 65
Query: 155 SLCSHPTNSDILVSGSRDGSFAIW 178
+ P + L S S D + IW
Sbjct: 66 KVAWSPCGN-YLASASFDATTCIW 88
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 150 (57.9 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 68/306 (22%), Positives = 131/306 (42%)
Query: 100 RISDWVA-HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCS 158
R S +A H A+ + + + + + SGD T+++WD + GH + ++
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 159 HPTNSDILVSGSRDGSFAIWDLR---CKSSPKSNCAESFVFSSAVVKGAHLLSQSKR-VS 214
P LVSGS+ G W+ + + SP + + ++ + + HL S +R V+
Sbjct: 160 SPDGKH-LVSGSKSGEICCWNPKKGELEGSPLTG-HKKWI-TGISWEPVHLSSPCRRFVT 216
Query: 215 RRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL----KAQIT-QAWPHAESSSA 269
K I + K + ++ + + VK W + T + W +
Sbjct: 217 SSKDGDARIWDITLKKSIICLSGHTLAVTCVK-WGGDGIIYTGSQDCTIKMWETTQGKLI 275
Query: 270 KETRLHG--ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSE 327
+E + HG I+SL+ + V T + DH Y + + ++ ++ + +S
Sbjct: 276 RELKGHGHWINSLALSTEYVLRTGA-FDHTGRQYPPNEEKQKALERYNKTKGDS------ 328
Query: 328 ICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDY 386
P ++SGS D ++W+ + + +L H V V + P+ GK I ++S D
Sbjct: 329 --PE--RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD--GKWIASASFDK 382
Query: 387 TVRLWS 392
+VRLW+
Sbjct: 383 SVRLWN 388
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 70/297 (23%), Positives = 122/297 (41%)
Query: 116 WIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC-SHPTNSDILVSGSRDGS 174
W E ++T S +W+ L H +++S+ SH N D +VSG G+
Sbjct: 133 WTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSH--NEDWMVSGDDSGN 190
Query: 175 FAIWDLRCKSSPKSNCAESF-VFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEV 233
W P N + F + ++G LS S + K AS + ++ + D
Sbjct: 191 IKYWQ------PNMNNVKIFKAHEQSKIRG---LSFSP--TDLKLASCADDKIIKIWD-- 237
Query: 234 SIATASAVNSIVKF-WDTRNL-----KAQITQAWPHAE------SSSAKETRLHG----I 277
A + N +V WD + + K+ I SS T LHG +
Sbjct: 238 -FARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTV 296
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHI-L 336
S + + NG ++ ++ D + ++++ + + +Q F G E + P + +
Sbjct: 297 SKVEWNQNGNWIVSASSDQLLKVFDIRTMKE--MQTFKGHGKE--VTALALHPYHEDLFV 352
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWS 392
SG DG W V P+ +HD +V +++W P G I+ S S+D+T + WS
Sbjct: 353 SGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHP--IGHILASGSNDHTTKFWS 407
Score = 120 (47.3 bits), Expect = 0.00067, P = 0.00067
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H++ + + W + I++AS DQ +K++D K GH + +L HP + D+
Sbjct: 292 HKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTALALHPYHEDLF 351
Query: 167 VSGSRDGSFAIW 178
VSG +DG W
Sbjct: 352 VSGDKDGKILYW 363
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 109 (43.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/137 (22%), Positives = 60/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC-HRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P + H + V
Sbjct: 228 GDDRP---ISYCHFSPNSKMLATACWSGLCKLWS----VPDCSLLHTLRGHNTNVGAIVF 280
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + L ++D N+ + + D ++K+W + + + GHT + + HP+ L
Sbjct: 281 HPKSTVSLD--QKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR-FL 337
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 338 GTTCYDRSWRLWDLEAQ 354
Score = 91 (37.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + ++ + T D ++WD +C L GH I + P N +
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSP-NGYHI 421
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 422 ATGSGDNTCKVWDLR 436
Score = 88 (36.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN HI +GS D VW + + + + +H VT V + P ++T + D T +
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 390 LWS 392
+W+
Sbjct: 475 IWT 477
Score = 79 (32.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+L+G+ D A +W P P+K L H+G+V ++ ++ I T S D T +LW
Sbjct: 464 LLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISSDGQLIATCSYDRTFKLWMA 520
Query: 394 E 394
E
Sbjct: 521 E 521
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 109 (43.4 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/137 (22%), Positives = 60/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC-HRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P + H + V
Sbjct: 228 GDDRP---ISYCHFSPNSKMLATACWSGLCKLWS----VPDCSLLHTLRGHNTNVGAIVF 280
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + L ++D N+ + + D ++K+W + + + GHT + + HP+ L
Sbjct: 281 HPKSTVSLD--QKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR-FL 337
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 338 GTTCYDRSWRLWDLEAQ 354
Score = 89 (36.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + ++ + T D ++WD +C L GH I + P N +
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYHI 421
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 422 ATGSGDNTCKVWDLR 436
Score = 88 (36.0 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN HI +GS D VW + + + + +H VT V + P ++T + D T +
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 390 LWS 392
+W+
Sbjct: 475 IWT 477
Score = 79 (32.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+L+G+ D A +W P P+K L H+G+V ++ ++ I T S D T +LW
Sbjct: 464 LLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISSDGQLIATCSYDRTFKLWMA 520
Query: 394 E 394
E
Sbjct: 521 E 521
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 71/277 (25%), Positives = 120/277 (43%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPTNSDILVSGSRDGSFAIWDL 180
ILT S D+T +IW +E K ++GHT +K + + S +L+S S D + +W+
Sbjct: 114 ILTGSYDKTSRIWSSEGKSIM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEW 172
Query: 181 RC-KSSPKS-NCAESFVFSSAVVKGAHLLSQSKRVSRRKAASM-SITSVLYLKDEVSIAT 237
++ K+ +C S V + S R M I S + +E +
Sbjct: 173 NVERNKVKALHCCRGHAGS---VDSIAVDSTGTRFCSGSWDKMLKIWSTVPTDEEDEMEE 229
Query: 238 ASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHR 297
++ N K T L +T+ P S KE ISS+ +AS DH
Sbjct: 230 ST--NRPRKKQKTEQLG--LTRT-PIVTLSGHKEA----ISSVLWSDAEEICSAS-WDHT 279
Query: 298 IYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADP 356
I +++V + G ++ +G ++ + S +C + SGS+D + +W
Sbjct: 280 IGVWDV---ESGSLKSTLTGNKVFNCISYSPLC---KRLASGSTDRHIRLWDPRTKDGSL 333
Query: 357 IKLK--SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ L SH G VT+V W P ++++ S D V+LW
Sbjct: 334 VSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLW 370
Score = 144 (55.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 76/303 (25%), Positives = 122/303 (40%)
Query: 95 NAEKARISDWVAHQNAIFDLCWIKEDTN---ILTASGDQTIKIWD----AEKKKCTGALM 147
++E I V H + + D+ W+K+D+ +L+AS DQTI +W+ K K
Sbjct: 127 SSEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCR 186
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GH GS+ S+ T + SGS D IW + + ES K L
Sbjct: 187 GHAGSVDSIAVDSTGTRFC-SGSWDKMLKIWST-VPTDEEDEMEESTNRPRKKQKTEQLG 244
Query: 207 LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES 266
L+++ V+ +I+SVL+ D I +AS WD W ES
Sbjct: 245 LTRTPIVTL-SGHKEAISSVLW-SDAEEICSAS--------WD------HTIGVWD-VES 287
Query: 267 SSAKETRLHG---ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY 323
S K T L G + +S L + D I L++ D G + S +
Sbjct: 288 GSLKST-LTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKD-GSLVSLSLTSHTGWV 345
Query: 324 VKSEICP-NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
+ P + ++SGS D +W +A L +H+ +V +V+W G +++
Sbjct: 346 TSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW--TNTGLLLSG 403
Query: 383 SDD 385
D
Sbjct: 404 GAD 406
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 190 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 245
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 246 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 295
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 296 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 354
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 355 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 409
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 410 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 466 LQF---DEFQIISSSHDDTILIWDFLN 489
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 190 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 245
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 246 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 295
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 296 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 354
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 355 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 409
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 410 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 465
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 466 LQF---DEFQIISSSHDDTILIWDFLN 489
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 80/327 (24%), Positives = 144/327 (44%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD + +C L
Sbjct: 207 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDDKIISGLRDNSIKIWDKQSLECLKVLT 262
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ SS + + + V HL
Sbjct: 263 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDV---SS--GEVLNTLIHHNEAV--LHLR 312
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 313 FCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 371
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 372 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 426
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 427 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 482
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 483 LQF---DEFQIISSSHDDTILIWDFLN 506
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 209 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 264
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 265 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 314
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 315 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 373
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 374 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 428
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 429 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 484
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 485 LQF---DEFQIISSSHDDTILIWDFLN 508
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 210 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 265
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 266 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 315
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 316 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 374
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 375 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 429
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 430 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 485
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 486 LQF---DEFQIISSSHDDTILIWDFLN 509
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSL 156
+K ++ HQ I + + + I +AS D++IK+WD K +L GH ++ +
Sbjct: 361 DKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Query: 157 CSHPTNSDILVSGSRDGSFAIWDLRCK 183
+ +S +LVSGS D + +WD++ +
Sbjct: 421 -AWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 102 (41.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 37/149 (24%), Positives = 62/149 (41%)
Query: 43 TVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARIS 102
++E H E ++V+F T K A D V +D + P F C
Sbjct: 109 SLEGHSEAV--ISVAFSPTGK---YLASGSGDTTVRFWDLSTETPHFTCQ---------- 153
Query: 103 DWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG-ALMGHTGSIKSLCSHPT 161
H++ + + W + + + + I +WD K G AL GH+ I +L P
Sbjct: 154 ---GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPL 210
Query: 162 NSD----ILVSGSRDGSFAIWDL---RCK 183
+++ + S S+DGS +WD RC+
Sbjct: 211 HANPECRYVASSSKDGSVRVWDTTAGRCE 239
Score = 94 (38.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
++SGSSD VW V K Q L H EV AV+W P + ++ + D +R+W
Sbjct: 429 LVSGSSDSTLKVWDV-KAQKLAADLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 483
Score = 89 (36.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 22/90 (24%), Positives = 35/90 (38%)
Query: 90 ACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGH 149
A R A S H A+ + + + + SGD T++ WD + GH
Sbjct: 96 AVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGH 155
Query: 150 TGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
+ S+ P L SG ++G +WD
Sbjct: 156 RHWVLSISWSPDGKK-LASGCKNGQILLWD 184
Score = 86 (35.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+ ++S D ++++WD +C L GHT S+ C +L S S+D + +W
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSVT--CLRWGGDGLLYSASQDRTIKVW 272
Score = 83 (34.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 123 ILTASGDQTIKIWD-AEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLR 181
+++ S D T+ +W AE KK + GH I + P +S I+ S S D S +WD R
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP-DSRIIASASFDKSIKLWDGR 402
Score = 69 (29.3 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 22/106 (20%), Positives = 49/106 (46%)
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
L + D ++L++ + DK P+ +G ++ + P++ I S S D + +W
Sbjct: 344 LVSGSDDFTLFLWSPAE-DKKPLARMTGH--QALINQVLFSPDSRIIASASFDKSIKLWD 400
Query: 349 VNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+ L+ H V + W ++ +V+ S D T+++W ++
Sbjct: 401 -GRTGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVK 444
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 122 (48.0 bits), Expect = 0.00026, P = 0.00026
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSL 156
+K ++ HQ I + + + I +AS D++IK+WD K +L GH ++ +
Sbjct: 362 DKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 421
Query: 157 CSHPTNSDILVSGSRDGSFAIWDLRCK 183
+ +S +LVSGS D + +WD++ +
Sbjct: 422 -AWSADSRLLVSGSSDSTLKVWDVKAQ 447
Score = 102 (41.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 37/149 (24%), Positives = 62/149 (41%)
Query: 43 TVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARIS 102
++E H E ++V+F T K A D V +D + P F C
Sbjct: 110 SLEGHSEAV--ISVAFSPTGK---YLASGSGDTTVRFWDLSTETPHFTCQ---------- 154
Query: 103 DWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG-ALMGHTGSIKSLCSHPT 161
H++ + + W + + + + I +WD K G AL GH+ I +L P
Sbjct: 155 ---GHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPL 211
Query: 162 NSD----ILVSGSRDGSFAIWDL---RCK 183
+++ + S S+DGS +WD RC+
Sbjct: 212 HANPECRYVASSSKDGSVRVWDTTAGRCE 240
Score = 94 (38.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
++SGSSD VW V K Q L H EV AV+W P + ++ + D +R+W
Sbjct: 430 LVSGSSDSTLKVWDV-KAQKLSTDLPGHADEVYAVDWSP-DGQRVASGGKDKCLRIW 484
Score = 89 (36.4 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 22/90 (24%), Positives = 35/90 (38%)
Query: 90 ACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGH 149
A R A S H A+ + + + + SGD T++ WD + GH
Sbjct: 97 AIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGH 156
Query: 150 TGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
+ S+ P L SG ++G +WD
Sbjct: 157 RHWVLSISWSPDGKK-LASGCKNGQILLWD 185
Score = 82 (33.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+ ++S D ++++WD +C L GH S+ C +L S S+D + +W
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSVT--CLRWGGDGLLYSASQDRTIKVW 273
Score = 70 (29.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 22/106 (20%), Positives = 49/106 (46%)
Query: 289 LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQ 348
L + D ++L++ + DK P+ +G ++ + P++ I S S D + +W
Sbjct: 345 LVSGSDDFTLFLWSPAE-DKKPLARMTGH--QALINQVVFSPDSRVIASASFDKSIKLWD 401
Query: 349 VNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
+ L+ H V + W ++ +V+ S D T+++W ++
Sbjct: 402 -GRTGKYLASLRGHVAAVYQIAWSA-DSRLLVSGSSDSTLKVWDVK 445
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 115 (45.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDL 180
VS SRD + +W++
Sbjct: 208 VSASRDKTIKMWEV 221
Score = 106 (42.4 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++AS D TIK+WD E L GHT S++ + T +L S S D + +WD +
Sbjct: 123 IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK-LLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S S+
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
Score = 104 (41.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 36/137 (26%), Positives = 57/137 (41%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W H + + H + +S D G L + D I L++ + H
Sbjct: 133 KVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNE 375
+ S I PN HI+S S D +W+V A +K+ G V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSASRDKTIKMWEV----ATGYCVKTFTGHREWVRMVRPNQ 244
Query: 376 AGKIV-TSSDDYTVRLW 391
G ++ +SS+D TVR+W
Sbjct: 245 DGTLIASSSNDQTVRVW 261
Score = 83 (34.3 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + + + + +I++AS D+TIK+W+ C GH ++ + P L
Sbjct: 191 HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV--RPNQDGTL 248
Query: 167 V-SGSRDGSFAIWDLRCK 183
+ S S D + +W + K
Sbjct: 249 IASSSNDQTVRVWVVATK 266
Score = 78 (32.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V P GK IV+ +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSIGMC-LMTLVGHDNWVRGVLVHPG--GKYIVSCADDKTLRIWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 74 (31.1 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 42/173 (24%), Positives = 75/173 (43%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQAWPHAES-----SSAKETRLHGISSLSQ 282
+D IA++S + V+ W T+ KA++ + E SA T L S ++
Sbjct: 244 QDGTLIASSSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 283 DSN--GVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEIC-PNASHILSG 338
S G FL + D I +++V G + G +V+ + P +I+S
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDV---SIGMCLMTLVG---HDNWVRGVLVHPGGKYIVSC 356
Query: 339 SSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ D +W + L +H+ VT++++ A +VT S D TV++W
Sbjct: 357 ADDKTLRIWDYKNKRCTKT-LSAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 69 (29.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 20/63 (31%), Positives = 29/63 (46%)
Query: 118 KEDTNILTASGDQTI-KIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFA 176
KE+ NI G + K W + AL GH + + HP S ++VS S D +
Sbjct: 76 KEEINIGGPIGQKRDPKEWIPRPPE-KYALSGHRSPVTRVIFHPVFS-VIVSASEDATIK 133
Query: 177 IWD 179
+WD
Sbjct: 134 VWD 136
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 222 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 277
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 278 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 327
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 328 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 386
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 441
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 442 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 498 LQF---DEFQIISSSHDDTILIWDFLN 521
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 79/327 (24%), Positives = 142/327 (43%)
Query: 88 SFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALM 147
++ C R N + RI + ++ C +D I++ D +IKIWD +C L
Sbjct: 222 NWRCGRHNLQ--RIQCRSENSKGVY--CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLT 277
Query: 148 GHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL- 206
GHTGS+ LC + ++V+GS D + +WD+ + + + V HL
Sbjct: 278 GHTGSV--LCLQ-YDERVIVTGSSDSTVRVWDVNT-----GEVLNTLIHHNEAV--LHLR 327
Query: 207 LSQSKRVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQ 259
S V+ K S+++ + D V + +AVN +V F D + A + +
Sbjct: 328 FSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN-VVDFDDKYIVSASGDRTIK 386
Query: 260 AWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSG 316
W + + H GI+ L Q + + ++ S D+ I L+++ + G ++ G
Sbjct: 387 VWSTSTCEFVRTLNGHKRGIACL-QYRDRLVVSGSS-DNTIRLWDI---ECGACLRVLEG 441
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNK---PQA--DPIKLKS---HDGEVTA 368
V+ N I+SG+ DG VW + P+A + L++ H G V
Sbjct: 442 ---HEELVRCIRFDN-KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFR 497
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ + + +I++SS D T+ +W N
Sbjct: 498 LQF---DEFQIISSSHDDTILIWDFLN 521
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 104 (41.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/138 (21%), Positives = 60/138 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSN---CAESFVFSSAVVKGAHLLSQSKR-VSRRKAA 219
++L S S D + ++ P N C + ++ + G + +R VS
Sbjct: 161 EVLASASYDNTIKMY----AEDPVDNDWDCTATLTSHTSTIWGIDFDADGERLVSCSDDT 216
Query: 220 SMSITSVLYLKDEVSIAT 237
++ I + + +AT
Sbjct: 217 TIKIWKAYHPGNSAGVAT 234
Score = 96 (38.9 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 38/138 (27%), Positives = 59/138 (42%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSR 215
+ S + +L + SRD S IW++ + CA + VK + +K V
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEVA--GDDEFECAAVLNSHTQDVKRV-VWHPTKEVLA 164
Query: 216 RKAASMSITSVLYLKDEV 233
+AS T +Y +D V
Sbjct: 165 --SASYDNTIKMYAEDPV 180
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+HD +V +V W P AG++++ SDD T+++W +
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 74 (31.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I+IW T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGSTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 104 (41.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIW 178
DIL S S D + ++
Sbjct: 161 DILASASYDNTIKMF 175
Score = 94 (38.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+HD +V +V W P AG++++ SDD T+++W +
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 74 (31.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I+IW T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 104 (41.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/138 (23%), Positives = 60/138 (43%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIWDLRCKSSPKSN---CAESFVFSSAVVKGAHLLSQSKR-VSRRKAA 219
D+L S S D + ++ P N C + ++ V G + +R VS
Sbjct: 161 DVLASASYDNTIKMF----AEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDT 216
Query: 220 SMSITSVLYLKDEVSIAT 237
++ I + + +AT
Sbjct: 217 TIKIWKAYHPGNTAGVAT 234
Score = 94 (38.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 87 (35.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+HD +V +V W P AG++++ SDD T+++W +
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 74 (31.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I+IW T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 101 (40.6 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 30/134 (22%), Positives = 57/134 (42%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRE-NAEKARISDWVA 106
G++ P +S+C+ S NS + + G L+ K+P R +
Sbjct: 214 GDDRP---ISYCQFSPNSKLLVTASWSGLCKLW----KVPDCTLIRTLRGHNTNVGAISF 266
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A L + D N+ + + D ++K+W + + + GH+ + + HP+ L
Sbjct: 267 HPQATLTL--EESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGR-FL 323
Query: 167 VSGSRDGSFAIWDL 180
+ D S+ +WDL
Sbjct: 324 GTTCYDHSWRLWDL 337
Score = 96 (38.9 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 330 PNASH-ILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIV-TSSDDY 386
PN H +L+G+ D A +W P P+K L H+G+V V+ P+ G+++ T S D
Sbjct: 444 PNDGHYLLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGVDLSPD--GQLIATCSYDR 499
Query: 387 TVRLWSLE 394
T +LW E
Sbjct: 500 TFKLWMSE 507
Score = 94 (38.1 bits), Expect = 4.3e-07, Sum P(3) = 4.3e-07
Identities = 23/90 (25%), Positives = 41/90 (45%)
Query: 303 VLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSH 362
V L G F I+ Y PN H+ +GS D VW + + + + +H
Sbjct: 376 VWDLRTGRCVMFLEGHIKEIY-SINFSPNGFHVATGSGDNACKVWDLRQRRCI-YTIPAH 433
Query: 363 DGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
V++V + PN+ ++T + D T ++W+
Sbjct: 434 QNLVSSVKFQPNDGHYLLTGAYDNTAKIWT 463
Score = 92 (37.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 22/75 (29%), Positives = 34/75 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + DL + + + T D ++WD +C L GH I S+ P N +
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFSP-NGFHV 407
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 408 ATGSGDNACKVWDLR 422
Score = 82 (33.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 24/82 (29%), Positives = 38/82 (46%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
I+D H + + W + T D + ++WD E ++ GH+ + L HP
Sbjct: 301 IADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHP 360
Query: 161 TNSDILVSGSRDGSFA-IWDLR 181
S + +G D SFA +WDLR
Sbjct: 361 DGS-LAGTGGLD-SFARVWDLR 380
Score = 39 (18.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 227 LYLKDEVSIATASAVNSIVKFWDTR 251
L+ + S+A ++S + WD R
Sbjct: 356 LHFHPDGSLAGTGGLDSFARVWDLR 380
>DICTYBASE|DDB_G0269686 [details] [associations]
symbol:DDB_G0269686 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0269686 EMBL:AAFI02000005 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K11795 RefSeq:XP_646188.1
ProteinModelPortal:Q55DE3 EnsemblProtists:DDB0238180 GeneID:8617141
KEGG:ddi:DDB_G0269686 OMA:ECVNSIN ProtClustDB:CLSZ2729295
Uniprot:Q55DE3
Length = 895
Score = 104 (41.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 107 HQNAIFDLCWIKEDTN-ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +F ++ D +++ D I+ +D E +KCT H+ + L PT +
Sbjct: 88 HSTNVFATNFLNNDNRKVISGGNDADIRYYDIENQKCT-VYKHHSKKVLKLSVCPTQPQV 146
Query: 166 LVSGSRDGSFAIWDLRCK 183
+S S DGS ++D+R K
Sbjct: 147 FLSSSSDGSVRLFDVRLK 164
Score = 98 (39.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
PN+ +I+SGS D ++W +K A ++ L+ HD V +V PNE I TS D +
Sbjct: 790 PNSEYIVSGSDDSKLFIW--DKESAKIVRILEGHDSHVNSVVCHPNEPC-IATSGIDPYI 846
Query: 389 RLW 391
LW
Sbjct: 847 CLW 849
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 94 ENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
E EK + H + + + + + I++ D+T++IWD K+KC L GH+ ++
Sbjct: 36 ETLEKTELH---GHNECVNSINFNDDGSLIVSGGDDETVRIWDVGKRKCLTTLYGHSTNV 92
Query: 154 KSLCSHPTNSDI--LVSGSRDGSFAIWDL 180
++ N+D ++SG D +D+
Sbjct: 93 --FATNFLNNDNRKVISGGNDADIRYYDI 119
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 75/303 (24%), Positives = 120/303 (39%)
Query: 91 CHRENAEKARISDWVAHQNAIFDLCWIKEDTN---ILTASGDQTIKIWD----AEKKKCT 143
C + E I H A+ D+ W+K+D+ +L+AS DQTI++W+ K K
Sbjct: 123 CRIWSLEGKTIMTITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEWNTERNKIKAL 182
Query: 144 GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKG 203
GH GS+ S+ + + SGS D IW S + E+ K
Sbjct: 183 HCCRGHAGSVDSIAVDASRTKFC-SGSWDKMLKIWSA-VPSEEEDEYEETSDRPRKKQKT 240
Query: 204 AHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPH 263
+ + S +++SVL+ D I +AS ++I K WD + T A
Sbjct: 241 EKMGLTRIPIVTLSGHSEAVSSVLW-SDVDEICSASWDHNI-KIWDVETGTVKSTLA--- 295
Query: 264 AESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY 323
K S LSQ L + D I L++ D G + S +
Sbjct: 296 ----GNKVFNCISYSPLSQR-----LASGSTDRHIRLWDPRSKD-GSLVLCSLTSHTGWV 345
Query: 324 VKSEICPN-ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
+ P+ ++SGS D +W +A L +H +V +V+W +AG I++
Sbjct: 346 TSVKWSPSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDW--TDAGLILSG 403
Query: 383 SDD 385
D
Sbjct: 404 GSD 406
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 70/277 (25%), Positives = 122/277 (44%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC--SHPTNSDILVSGSRDGSFAIWDL 180
ILT S D+T +IW E K + GHT ++K + + S +L+S S D + +W+
Sbjct: 114 ILTGSYDKTCRIWSLEGKTIM-TITGHTEAVKDVTWVKKDSLSCLLLSASIDQTIQLWEW 172
Query: 181 RCKSSP-KS-NCAESFVFS-SAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIAT 237
+ + K+ +C S ++ A S++K S + I S + ++E
Sbjct: 173 NTERNKIKALHCCRGHAGSVDSIAVDA---SRTKFCSGSWDKMLKIWSAVPSEEEDEYEE 229
Query: 238 ASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHR 297
S + K T K +T+ P S E +SS+ +AS DH
Sbjct: 230 TS--DRPRKKQKTE--KMGLTRI-PIVTLSGHSEA----VSSVLWSDVDEICSAS-WDHN 279
Query: 298 IYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADP 356
I +++V + G ++ +G ++ + S P + + SGS+D + +W
Sbjct: 280 IKIWDV---ETGTVKSTLAGNKVFNCISYS---PLSQRLASGSTDRHIRLWDPRSKDGSL 333
Query: 357 I--KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+ L SH G VT+V W P+ ++V+ S D V+LW
Sbjct: 334 VLCSLTSHTGWVTSVKWSPSHEQQLVSGSLDKLVKLW 370
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 107 (42.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 31/137 (22%), Positives = 59/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSF-ACHRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P H + V
Sbjct: 228 GDDRP---ISYCHFSPNSKMLATACWSGLCKLWS----VPDCNLLHTLRGHNTNVGAIVF 280
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + L ++D N+ + + D ++K+W + + + GHT + + HP+ L
Sbjct: 281 HPKSTVSLD--QKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGR-FL 337
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 338 GTTCYDRSWRLWDLEAQ 354
Score = 89 (36.4 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN HI +GS D VW + + + + +H VT V + P ++T + D T +
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 474
Query: 390 LWS 392
+W+
Sbjct: 475 IWT 477
Score = 89 (36.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + ++ + T D ++WD +C L GH I + P N +
Sbjct: 363 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYHI 421
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 422 ATGSGDNTCKVWDLR 436
Score = 80 (33.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
+ + +L+G+ D A +W P P+K L H+G+V ++ ++ I T S D T +
Sbjct: 460 HGNFLLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISSDGQLIATCSYDRTFK 516
Query: 390 LWSLE 394
LW E
Sbjct: 517 LWMAE 521
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 121 (47.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 38/141 (26%), Positives = 58/141 (41%)
Query: 43 TVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARIS 102
T + H P + C + + + A D V+++ P E A K R
Sbjct: 102 TNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTVY------P-ITSDEEMAAKKRT- 153
Query: 103 DWVAHQNAIFDLC-WIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPT 161
V + C + D ILT SGD T +WD E + + GH+G + ++ P
Sbjct: 154 --VGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPN 211
Query: 162 NS-DILVSGSRDGSFAIWDLR 181
+ + VSGS D IWD+R
Sbjct: 212 ETGNTFVSGSCDRMAFIWDMR 232
Score = 69 (29.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+ +G +D +W K + + L H+ +V+ V P+ + T S DYT+R+W+
Sbjct: 303 LFAGYNDYTVNLWDTLKSERVCL-LYGHENKVSCVQVSPDGTA-LSTGSWDYTIRVWA 358
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 75/307 (24%), Positives = 124/307 (40%)
Query: 106 AHQNAIFDLCWIKEDTN----ILTASGDQTIKIW--DAEKKKCTGALMGHTGSIKSLCSH 159
AH++AI+ W + + + I+T S D +K+W EK + L GH + S+ +
Sbjct: 14 AHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSV-NI 72
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAE-----SFVFS---SAVVKGAHL----- 206
N I S S D +WDL KS A + FS + G+HL
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNI 132
Query: 207 --LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHA 264
+ K+ I S+ Y D +A+ A++ I+ +D K H
Sbjct: 133 FGVESGKKEHSLDTRGKFILSIAYSPDGKYLASG-AIDGIINIFDIATGKLL------HT 185
Query: 265 ESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYV 324
A R + S DS + +TAS D I +Y+V + G S+ +
Sbjct: 186 LEGHAMPIRS---LTFSPDSQ-LLVTASD-DGYIKIYDVQHANLAGTLSGHG----SWVL 236
Query: 325 KSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
P+ +H +S SSD + VW + ++ H +V +V + P KIV++ D
Sbjct: 237 SVAFSPDDTHFVSSSSDKSIKVWDTSS-RSCVNTFFDHQDQVWSVKYNPT-GSKIVSAGD 294
Query: 385 DYTVRLW 391
D + ++
Sbjct: 295 DRAIHIY 301
Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/151 (23%), Positives = 71/151 (47%)
Query: 31 DVVTDFTEIGAVTVEH--HGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPS 88
D + + +I + H G P +++F S +S + + +DGY+ ++D +
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAMPIRSLTF---SPDSQLLVTASDDGYIKIYDVQ----- 220
Query: 89 FACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMG 148
H A +S H + + + + +DT+ +++S D++IK+WD + C
Sbjct: 221 ---HANLA--GTLS---GHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFD 272
Query: 149 HTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
H + S+ +PT S I+ +G D + I+D
Sbjct: 273 HQDQVWSVKYNPTGSKIVSAGD-DRAIHIYD 302
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 99 (39.9 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 107 HQNAIFDLCWIKEDTN---ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N ++ L W E N +L+ S D T+K+WD ++ +GH I P +
Sbjct: 122 HKNEVYSLDW-GEKWNYHTLLSGSWDCTLKLWDCNRQNSITTFVGHNDLIYGAKFSPLIA 180
Query: 164 DILVSGSRDGSFAIWD 179
++ S S DG +W+
Sbjct: 181 NLFASVSTDGHLNLWN 196
Score = 92 (37.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 287 VFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH-----ILSGSSD 341
+F + S H + L+N L P+ IE+ + +C + SH +++G SD
Sbjct: 182 LFASVSTDGH-LNLWNSLDFAGKPLMS-----IEA-HASEALCCDWSHFDRNVLVTGGSD 234
Query: 342 GNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
G W + K + +L S + V + P+ A + +++ D+T R+W+LE
Sbjct: 235 GLIRGWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLE 287
Score = 88 (36.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 43/177 (24%), Positives = 75/177 (42%)
Query: 43 TVEHHGEET--PPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHREN-AEKA 99
T + HG P ++ + S ++ ++ G + L + S + ++ E
Sbjct: 8 TTDRHGYSLRFSPFEANYLLLA-TSQLYGLAG-GGSLFLLEQNSNTNSSSTDGQSLGELC 65
Query: 100 RISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIW---DAEK-------KKCTGALMG 148
R+ +W + +FD+ W +I TASGD +++IW D E K+ L
Sbjct: 66 RL-EW---SDGLFDVAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQE 121
Query: 149 HTGSIKSL-CSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGA 204
H + SL N L+SGS D + +WD C + N +FV + ++ GA
Sbjct: 122 HKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWD--CN---RQNSITTFVGHNDLIYGA 173
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 115 (45.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H++ I + + +E I+++S D I+IW+ + + C L GH + S HP + D++
Sbjct: 92 HKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKD-DLV 150
Query: 167 VSGSRDGSFAIWDL 180
VS S D + IWD+
Sbjct: 151 VSASLDQTIRIWDI 164
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P +I+S S D +W++N P D + H V+ + P + I+++S+D T+R
Sbjct: 214 PTQPYIVSASDDHQVKLWRMNDPIVDTFR--GHYNNVSCALFHPRQ-DLIISNSEDKTIR 270
Query: 390 LWSL 393
+W +
Sbjct: 271 VWDI 274
Score = 82 (33.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 121 TNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
T L SG D IK+W+ ++++C L GH I+S+ H + +VS S D IW
Sbjct: 62 TQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFH-REAPWIVSSSDDMVIRIW 120
Query: 179 DLRCKS 184
+ + ++
Sbjct: 121 NWQSRT 126
Score = 64 (27.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 357 IKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLEN 395
+ L+ HD V ++ P + IV++SDD+ V+LW + +
Sbjct: 198 LSLEGHDRGVNWASFHPTQP-YIVSASDDHQVKLWRMND 235
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 138 (53.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 47/170 (27%), Positives = 78/170 (45%)
Query: 96 AEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQT-IKIWDAEKKKCTGALMGHTGSIK 154
A A + + VAH + + L K +L GD + +W K C +L GHT ++
Sbjct: 12 AAVAAVEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVE 71
Query: 155 SLCSHPTNSDILVSGSRDGSFAIWDL------RCKSSPKSN-CAESF-VFSSAVVKGAH- 205
S+ + T +++V+GS+ GS +WDL R K+N C+ F + V G+
Sbjct: 72 SVRLN-TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQD 130
Query: 206 ---LLSQSKR---VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWD 249
L +R V R + S ++ + + D +A+A A + VK WD
Sbjct: 131 TNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA-ADDHTVKLWD 179
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 107 (42.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 31/137 (22%), Positives = 59/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSF-ACHRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P H + V
Sbjct: 244 GDDRP---ISYCHFSPNSKMLATACWSGLCKLWS----VPDCNLLHTLRGHNTNVGAIVF 296
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + L ++D N+ + + D ++K+W + + + GHT + + HP+ L
Sbjct: 297 HPKSTVSLD--QKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR-FL 353
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 354 GTTCYDRSWRLWDLEAQ 370
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN HI +GS D VW + + + + +H VT V + P ++T + D T +
Sbjct: 432 PNGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 490
Query: 390 LWS 392
+W+
Sbjct: 491 IWT 493
Score = 89 (36.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + ++ + T D ++WD +C L GH I + P N +
Sbjct: 379 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYHI 437
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 438 ATGSGDNTCKVWDLR 452
Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
+ + +L+G+ D A +W P P+K L H+G+V ++ ++ I T S D T +
Sbjct: 476 HGNFLLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISSDGQLIATCSYDRTFK 532
Query: 390 LWSLE 394
LW E
Sbjct: 533 LWMAE 537
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 150 (57.9 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 84/349 (24%), Positives = 144/349 (41%)
Query: 74 DGYVSLFDSRRKLPSFACHRENAE-KARISDWVAHQNA--IFDL-------CWIKEDTNI 123
D ++F RR + SF+ ENAE + +D A IFD + +
Sbjct: 272 DSISNMFGRRRSVNSFSSSPENAEVPSACADVRVPSTALHIFDAHDGEVNAVRFSPGSRL 331
Query: 124 LTASG-DQTIKIWDAEKKKCT--GALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW-- 178
L G D+ +K+W+ +C GAL G I S+ + L++ S D + IW
Sbjct: 332 LATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSI-EFDSAGSYLLAASNDFASRIWTV 390
Query: 179 -DLRCKSSPKSNCAE----SFVFSSA-VVKGAHLLSQSKRVSRRKAASMSITSVLYLKDE 232
D R + + + + F+ +A +V G++ + R K SM ++
Sbjct: 391 DDYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCND 450
Query: 233 VSIATASAVNS-----IVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ + T V S V+FWD I+ H + K R+ + L+ D +
Sbjct: 451 I-VCTEQCVMSGHFDKKVRFWD-------ISYQNYHIQKQLNKLCRVTSLD-LNHDRTEL 501
Query: 288 FLTASCMDHRIYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNA 344
LT S D L ++ L + Q F+ G + S + + P+ S + +GS+DG
Sbjct: 502 -LTCSRDD----LVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVL 556
Query: 345 YVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR-LWS 392
Y+W V + + K H + +V+W + +G V S + + LWS
Sbjct: 557 YLWNVLTGKLEKTLDKGHSSAINSVSW--SLSGAFVASVEKGSKAVLWS 603
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 107 (42.7 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 31/137 (22%), Positives = 59/137 (43%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSF-ACHRENAEKARISDWVA 106
G++ P +S+C S NS + A + G L+ +P H + V
Sbjct: 246 GDDRP---ISYCHFSPNSKMLATACWSGLCKLWS----VPDCNLLHTLRGHNTNVGAIVF 298
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H + L ++D N+ + + D ++K+W + + + GHT + + HP+ L
Sbjct: 299 HPKSTVSLD--QKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGR-FL 355
Query: 167 VSGSRDGSFAIWDLRCK 183
+ D S+ +WDL +
Sbjct: 356 GTTCYDRSWRLWDLEAQ 372
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN HI +GS D VW + + + + +H VT V + P ++T + D T +
Sbjct: 434 PNGYHIATGSGDNTCKVWDLRQRRC-VYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 492
Query: 390 LWS 392
+W+
Sbjct: 493 IWT 495
Score = 89 (36.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H ++D+ + ++ + T D ++WD +C L GH I + P N +
Sbjct: 381 HSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSP-NGYHI 439
Query: 167 VSGSRDGSFAIWDLR 181
+GS D + +WDLR
Sbjct: 440 ATGSGDNTCKVWDLR 454
Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
+ + +L+G+ D A +W P P+K L H+G+V ++ ++ I T S D T +
Sbjct: 478 HGNFLLTGAYDNTAKIW--THPGWSPLKTLAGHEGKVMGLD-ISSDGQLIATCSYDRTFK 534
Query: 390 LWSLE 394
LW E
Sbjct: 535 LWMAE 539
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 114 (45.2 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 21/75 (28%), Positives = 42/75 (56%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H +++ D+ + + + S D TIK+WD + +C + GH ++ S+ P N D +
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP-NGDHI 207
Query: 167 VSGSRDGSFAIWDLR 181
VS +RD + +W+++
Sbjct: 208 VSAARDKTIKMWEVQ 222
Score = 101 (40.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 26/91 (28%), Positives = 45/91 (49%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+++AS D TIK+WD E L GHT S++ + S + +L S S D + +WD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDI-SFDHSGKLLASCSADMTIKLWDFQG 181
Query: 183 KSSPKSNCAESFVFSSAVV--KGAHLLSQSK 211
++ SS + G H++S ++
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
Score = 95 (38.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 34/137 (24%), Positives = 56/137 (40%)
Query: 259 QAWPHAESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG 316
+ W + + + H + +S D +G L + D I L++ + H
Sbjct: 133 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD 192
Query: 317 CRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIK-LKSHDGEVTAVNWCPNE 375
+ S I PN HI+S + D +W+V +K H V V PN+
Sbjct: 193 HNVSSV----AIMPNGDHIVSAARDKTIKMWEVQTGYC--VKTFTGHREWVRMVR--PNQ 244
Query: 376 AGKIVTS-SDDYTVRLW 391
G ++ S S+D TVR+W
Sbjct: 245 DGTLIASCSNDQTVRVW 261
Score = 78 (32.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
+LSGS D +W V+ + L HD V V + + GK + S +DD T+R+W
Sbjct: 311 LLSGSRDKTIKMWDVSTGMC-LMTLVGHDNWVRGVLF--HSGGKFILSCADDKTLRVWDY 367
Query: 394 EN 395
+N
Sbjct: 368 KN 369
Score = 68 (29.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 42/175 (24%), Positives = 71/175 (40%)
Query: 230 KDEVSIATASAVNSIVKFW--DTRNLKAQITQ--------AW-PHAESSSAKETRLHGIS 278
+D IA+ S + V+ W T+ KA++ + +W P + SS E G
Sbjct: 244 QDGTLIASCSN-DQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT--GSE 300
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
+ G FL + D I +++V + H + R F+ IL
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFH------SGGKFIL 354
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
S + D VW + L +H+ VT++++ A +VT S D TV++W
Sbjct: 355 SCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDF-HKTAPYVVTGSVDQTVKVW 407
Score = 68 (29.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 145 ALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
AL GH + + HP S ++VS S D + +WD
Sbjct: 103 ALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWD 136
>UNIPROTKB|G4MMY6 [details] [associations]
symbol:MGG_06892 "WD repeat-containing protein srw1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CM001231
RefSeq:XP_003709620.1 ProteinModelPortal:G4MMY6
EnsemblFungi:MGG_06892T0 GeneID:2685065 KEGG:mgr:MGG_06892
Uniprot:G4MMY6
Length = 604
Score = 124 (48.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 95 NAEKARISDWVA-HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSI 153
NA+ +R++ + + + WI++ T+I +G ++IWDAEK + + GHT +
Sbjct: 324 NAQTSRVNKLCTLEDDTVTSVSWIQKGTHIAIGTGKGLVQIWDAEKSRRLRTMTGHTARV 383
Query: 154 KSLCSHPTNSDILVSGSRD 172
SL N+ IL SGSRD
Sbjct: 384 GSLA---WNTHILTSGSRD 399
Score = 72 (30.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 333 SHIL-SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNW-CPNEAGKIVTSSDDYTVRL 390
+HIL SGS D Y V P KL H EV + W C E G++ + +D + +
Sbjct: 390 THILTSGSRDRLIYHRDVRAPDQWMRKLVGHKQEVCGLKWNC--EDGQLASGGNDNKLMV 447
Query: 391 W 391
W
Sbjct: 448 W 448
Score = 58 (25.5 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 331 NASHILS--GSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIV-TSSDDY 386
N++ I+S G S VW+ P + L H V + P+ G++V T + D
Sbjct: 518 NSNEIVSTHGYSQNQIVVWKY--PSMTQVASLTGHTYRVLYLAMSPD--GRVVVTGAGDE 573
Query: 387 TVRLWSL 393
T+R W+L
Sbjct: 574 TLRFWNL 580
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 99 (39.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 42/164 (25%), Positives = 66/164 (40%)
Query: 32 VVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFAC 91
+V + I V V GEE P+A + + + +FA+ + + D + L +F
Sbjct: 144 MVPHYGGINRVRVSWLGEE--PVAGVWSEKGQ-VEVFALRR---LLQVVDDPQALATFL- 196
Query: 92 HRENAEKARISDWVAHQNAIFDLCWI-KEDTNILTASGDQTIKIWDAEKKKCTGA----L 146
E A I + H F L W + +LT + I +W
Sbjct: 197 RDEQARVKPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPF 256
Query: 147 MGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNC 190
+GHT S++ L PT + S S D S IWD+R ++P C
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIR--AAPSKAC 298
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 335 ILSGSSDGNAYVWQVNK-PQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSG DG VW + + P+ K H VT+V W P ++G S D + W
Sbjct: 322 LLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWD 381
Query: 393 L 393
L
Sbjct: 382 L 382
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 99 (39.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 37/137 (27%), Positives = 54/137 (39%)
Query: 67 IFAVSDEDGYVSLFDSRRKL-----PSFACHRENAEKARIS---DWVAHQNAIFDLCWI- 117
+ V E G V +F RR L P E+ARI + H F L W
Sbjct: 165 VAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKPIFSFAGHMGEGFALDWSP 224
Query: 118 KEDTNILTASGDQTIKIWDAEKKKCTGA----LMGHTGSIKSLCSHPTNSDILVSGSRDG 173
+ +LT + + +W + +GHT S++ L PT + S S D
Sbjct: 225 RVPGRLLTGDCQKNVHLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADA 284
Query: 174 SFAIWDLRCKSSPKSNC 190
S IWD+R ++P C
Sbjct: 285 SIRIWDIR--AAPGKAC 299
Score = 95 (38.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 335 ILSGSSDGNAYVWQVNK-PQADPIK-LKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
+LSG DG VW + + P+ K H VT+V W P ++G S D + W
Sbjct: 323 LLSGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWD 382
Query: 393 L 393
L
Sbjct: 383 L 383
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 64/260 (24%), Positives = 117/260 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S ++
Sbjct: 109 HSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLV 168
Query: 167 VSGSRDGSFAIWDLRCKSSPKS--NCAE--SFVF---SSAVVKGA---HL----LSQSKR 212
+GS DG+ +WD+R K++ ++ N + + F S ++ G + L Q+K
Sbjct: 169 CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKL 228
Query: 213 VSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNL--KAQITQAWPHAESSSAK 270
+ + S+T L L E S ++A+++ V+ WD R K + + + + +
Sbjct: 229 TYTMRGHADSVTG-LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIF-QGNVHNFE 286
Query: 271 ETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK-GPIQHFSGCRIESFYVKSEIC 329
+ L S S D G + A D +Y ++ L + G I R E VK +
Sbjct: 287 KNLLR--CSWSPD--GSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDS-VKPQ-- 339
Query: 330 PNASHILSGSSDGNAYVWQV 349
ILS SSD Y+ ++
Sbjct: 340 -EGIXILSASSDKRLYMGEI 358
Score = 117 (46.2 bits), Expect = 0.00057, P = 0.00057
Identities = 40/142 (28%), Positives = 61/142 (42%)
Query: 56 VSFCKTSKNS-HIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
V+ C ++ + +DG V L+D R+K A I + QN L
Sbjct: 155 VNSCYPARRGPQLVCTGSDDGTVKLWDIRKK-------------AAIQTF---QNTYQVL 198
Query: 115 CWIKEDTNILTASG--DQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
DT+ SG D IK+WD + K T + GH S+ L S + L+S + D
Sbjct: 199 AVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGL-SLSSEGSYLLSNAMD 257
Query: 173 GSFAIWDLRCKSSPKSNCAESF 194
+ +WD+R +PK C + F
Sbjct: 258 NTVRVWDVR-PFAPKERCVKIF 278
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 103 (41.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNSHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIW 178
+IL S S D + ++
Sbjct: 161 EILASASYDNTIKMY 175
Score = 94 (38.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIQWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 87 (35.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+HD +V +V W P AG++++ SDD T+++W +
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 74 (31.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKK-CTGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I+IW T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIQWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 103 (41.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDA---EKKKCTGALMGHTGSIKSLCSHPTNS 163
H+N + + W + + T S D+++ IW+ ++ +C L HT +K + HPT
Sbjct: 102 HENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTK- 160
Query: 164 DILVSGSRDGSFAIW 178
D+L S S D + ++
Sbjct: 161 DVLASASYDNTIKMF 175
Score = 94 (38.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKK--CTGALMGHTGSIKS 155
K +SD H+ I ++ W + +AS D T IW + C L GH +KS
Sbjct: 51 KTILSD--GHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKS 108
Query: 156 LCSHPTNSDILVSGSRDGSFAIWDL 180
+ S + +L + SRD S IW++
Sbjct: 109 V-SWSRSGGLLATCSRDKSVWIWEV 132
Score = 87 (35.7 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 361 SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
+HD +V +V W P AG++++ SDD T+++W +
Sbjct: 301 AHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKV 333
Score = 73 (30.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 107 HQNAIFDLCWIKEDTNILTASG-DQTIKIWDAEKKKC-TGALM--GHTGSIKSLCSHPTN 162
H+ I+ + W + N+ + G D+ I+IW T ++ GH +I+ + P
Sbjct: 13 HKGRIWGVAWHPKG-NVFASCGEDKAIRIWSLTGNTWGTKTILSDGHKRTIREIRWSPCG 71
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNC 190
L S S D + AIW KSS + C
Sbjct: 72 Q-YLASASFDATTAIWS---KSSGEFEC 95
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 108 (43.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWD-AEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +A+ D+ +++ S D +IK+WD + C +L GH ++ S+ PT D
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG-DF 205
Query: 166 LVSGSRDGSFAIWDL 180
++S SRD + WD+
Sbjct: 206 VLSASRDHTIKQWDI 220
Score = 91 (37.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/79 (24%), Positives = 35/79 (44%)
Query: 107 HQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDIL 166
H++ + + ++ +L+AS D TIK WD C GH ++ + + +
Sbjct: 190 HEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMI-RISNDGTLF 248
Query: 167 VSGSRDGSFAIWDLRCKSS 185
S S D + +W KS+
Sbjct: 249 ASASLDQTVTVWSFATKSA 267
Score = 84 (34.6 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 331 NASHIL-SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGK-IVTSSDDYTV 388
N++HIL SGS D + W +N L +H+ V + + P GK +++ +DD T+
Sbjct: 300 NSTHILFSGSRDRSIKAWNINTGDV-LFTLLAHENWVRGLAFHPK--GKYLISVADDKTL 356
Query: 389 RLWSL 393
R+W L
Sbjct: 357 RVWEL 361
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 150 (57.9 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 68/302 (22%), Positives = 133/302 (44%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDA-EKKKCTGALMGHTGSIKSLCSHPTN 162
+V HQ ++ LC + + S D+TIK+WD KC L GH G + +LC
Sbjct: 382 FVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALC---IQ 438
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
+ L SGS D + +WD++ + K N + + +H + S + K +
Sbjct: 439 GNKLYSGSADCTIIVWDIQ--NLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDI- 495
Query: 223 ITSVLYLKDEVS---------IATASAVNS----IVKFWDTRNLKAQITQAWPHAESSSA 269
+ + L LK E++ +A+ + + S +K WD RNL+ H +S
Sbjct: 496 VGTELKLKKELTGLNHWVRALVASQNYLYSGSYQTIKIWDIRNLECV------HVLQTSG 549
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC 329
+ S++ ++ + ++ I+++++ K ++ +G + + Y + I
Sbjct: 550 GS-----VYSIAVTNHHI--VCGTYENLIHVWDIET--KEQVRTLTG-HVGTVYALAVIS 599
Query: 330 -PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P+ + + S S D + VW ++ L+ H G VTA+ G++ + + D TV
Sbjct: 600 TPDQTKVFSASYDRSLRVWSMDNMICTQTLLR-HQGSVTAL---AVSRGRLFSGAVDSTV 655
Query: 389 RL 390
++
Sbjct: 656 KV 657
Score = 131 (51.2 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 67/266 (25%), Positives = 119/266 (44%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAV 200
KC G +GH G + LC + D+L SGS D + +WD C + C ++ +
Sbjct: 377 KCKGTFVGHQGPVWCLCVYSIG-DLLFSGSSDKTIKVWDT-CTTY---KCQKTLEGHDGI 431
Query: 201 VKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSI-ATASAVNSIVKFWD---TRNLKAQ 256
V A + +K S ++ + + L+ +I A + V ++V + + +LKA
Sbjct: 432 VL-ALCIQGNKLYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKA- 489
Query: 257 ITQAWP--HAESSSAKE-TRL-HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQ 312
+ W E KE T L H + +L N ++ S I ++++ L+ +
Sbjct: 490 -IKVWDIVGTELKLKKELTGLNHWVRALVASQNYLY---SGSYQTIKIWDIRNLECVHVL 545
Query: 313 HFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVN-KPQADPIKLKSHDGEV--TAV 369
SG + S V + HI+ G+ + +VW + K Q L H G V AV
Sbjct: 546 QTSGGSVYSIAVTNH------HIVCGTYENLIHVWDIETKEQVRT--LTGHVGTVYALAV 597
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLEN 395
P++ K+ ++S D ++R+WS++N
Sbjct: 598 ISTPDQT-KVFSASYDRSLRVWSMDN 622
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 152 (58.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTG 151
++ A+KA H +A+ DL W + N+L +AS D+T+ +WD EK K L HT
Sbjct: 240 KKKAKKAA-EPIEGHTDAVLDLSWNRLVRNVLASASADETVILWDLEKGKPAATLAKHTD 298
Query: 152 SIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSN 189
+++L HP + L+SGS D S ++D C+S S+
Sbjct: 299 KVQTLKFHPFEAQTLISGSFDKSVILYD--CRSPDDSH 334
Score = 39 (18.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 67 IFAVSDEDGYVSLFDS 82
+F ++ED YV++ D+
Sbjct: 117 VFGTNEEDPYVTIKDT 132
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 80/309 (25%), Positives = 124/309 (40%)
Query: 106 AHQNAIFDLCWIKEDTN----ILTASGDQTIKIW--DAEKKKCTGALMGHTGSIKSL-CS 158
AH +AI+ + W K N +++ S D +K+W + EK L GH + S+ S
Sbjct: 14 AHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLDLQWTLEGHQLGVVSVDIS 73
Query: 159 HPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAE-----SFVFS---SAVVKGAHL---- 206
H T S I S S D +WDL KS A S FS + G+H+
Sbjct: 74 H-TGS-IAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVN 131
Query: 207 ---LSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPH 263
+ K+ I S+ Y D +A+ A++ I+ +D K H
Sbjct: 132 IFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASG-AIDGIINIFDIATGKLL------H 184
Query: 264 AESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY 323
A R + S DS + +TAS D I +Y+V + G S+
Sbjct: 185 TLEGHAMPIRS---LTFSPDSQ-LLVTASD-DGYIKIYDVQHANLAGTLSGHG----SWV 235
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAG-KIVTS 382
+ CP+ +H +S SSD + VW + H +V V + N +G KIV+
Sbjct: 236 LNVAFCPDDTHFVSSSSDKSVKVWDAGT-RTCVHTFFDHQDQVWGVKY--NGSGSKIVSV 292
Query: 383 SDDYTVRLW 391
DD + ++
Sbjct: 293 GDDQEIHIY 301
>UNIPROTKB|H3BT67 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000569627 Bgee:H3BT67 Uniprot:H3BT67
Length = 117
Score = 125 (49.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQT-IKIWDAEKKKCTGALMGHTGSIKSLCS 158
++ + VAH + + L K +L GD + +W K C +L GHT ++S+
Sbjct: 12 KLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRL 71
Query: 159 HPTNSDILVSGSRDGSFAIWDL 180
+ T +++V+GS+ GS +WDL
Sbjct: 72 N-TPEELIVAGSQSGSIRVWDL 92
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 120 (47.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 75 GYVSLFDSRRKLPSFACHRENAEKARISDW-----------VAHQNAIFDLCWIKEDTNI 123
G+ + +S + PSF+ +E A I W H NA+ D+ + K +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 124 LTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
+ S D TIK+WD + C L GH ++ + P+ D L+S SRD + +W+
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG-DQLISSSRDKTIKVWE 218
Score = 71 (30.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWS 392
++ +GS D +W++ + + HD V AV + P GK + S DD T+R+W
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYI-GHDNWVRAVRFHP--CGKFLLSVGDDKTIRVWD 374
Query: 393 L 393
+
Sbjct: 375 I 375
Score = 55 (24.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 13/65 (20%), Positives = 29/65 (44%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P +LS D VW + + + ++H ++ +++C + I T D ++
Sbjct: 356 PCGKFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNP-HIATGGVDDVIK 414
Query: 390 LWSLE 394
+W L+
Sbjct: 415 VWKLQ 419
Score = 46 (21.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 375 EAGKIVTSSDDYTVRLWSL 393
+ G + T S D T+++W L
Sbjct: 315 QCGYLATGSRDKTIKIWEL 333
Score = 38 (18.4 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 327 EICPNASHILSGSSDGNAYVWQV 349
+ C + HI +G D VW++
Sbjct: 396 DFCLHNPHIATGGVDDVIKVWKL 418
WARNING: HSPs involving 571 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 512 482 0.00080 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 821
No. of states in DFA: 626 (67 KB)
Total size of DFA: 309 KB (2158 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.91u 0.21s 42.12t Elapsed: 00:00:02
Total cpu time: 41.98u 0.22s 42.20t Elapsed: 00:00:02
Start: Fri May 10 01:24:02 2013 End: Fri May 10 01:24:04 2013
WARNINGS ISSUED: 2