BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010390
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZJW8|DTL_CHICK Denticleless protein homolog OS=Gallus gallus GN=DTL PE=2 SV=1
Length = 720
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 192/363 (52%), Gaps = 31/363 (8%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP SF H+ AV++E+G+V L+D+ +N K +W AH
Sbjct: 43 GMPVPPFGCSFSAAPNFEHVLAVANEEGFVRLYDT---------EAQNTTKLISKEWQAH 93
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + I+TASGDQT K+WD + G GH S+KS+ +
Sbjct: 94 SNAVFDLAWVPGEHRIVTASGDQTAKVWDVRAGELLGICKGHQCSLKSVAFSRFEKAVFC 153
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLS--------QSKRVSRRKAA 219
+G RDG+ +WD RC N + F + GAH + + KR + R A
Sbjct: 154 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNVVDRQTPSKLRKKRQNLRGLA 207
Query: 220 SM-----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES--SSAKET 272
+ S+T VL L+DE ++ +A AV+ ++K WD R A Q ++S T
Sbjct: 208 PLVDFQQSVTVVL-LQDEHTLISAGAVDGVIKVWDLRKNYAAYRQDPVPSKSFFYPGTST 266
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ FSG + +FY+KS I P+
Sbjct: 267 RKLGYSSLVLDSTGANLFANCTDDSIYMFNMTSLKTFPVAVFSGHQNSTFYIKSSISPDD 326
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD NAY+W+V++P P L H EVT++ WCP++ KI T SDD TVR+W
Sbjct: 327 QFLVSGSSDCNAYIWKVSEPSLPPRILVGHSQEVTSIAWCPSDFTKIATCSDDNTVRIWR 386
Query: 393 LEN 395
L++
Sbjct: 387 LQH 389
>sp|Q3TLR7|DTL_MOUSE Denticleless protein homolog OS=Mus musculus GN=Dtl PE=1 SV=2
Length = 729
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 186/361 (51%), Gaps = 32/361 (8%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +FC HI AV++E+G+V L+++ + C +E W+AH
Sbjct: 47 GVPVPPFGCTFCTAPSMEHILAVANEEGFVRLYNTESQTSKKTCFKE---------WMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVRAGELMGTCKGHQCSLKSVAFPKFQKAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKA--------- 218
+G RDG+ IWD RC N + F + GAH + + S+ K
Sbjct: 158 TGGRDGNIMIWDTRC------NKKDGFYRQVNQISGAHNTADKQTPSKPKKKQNSKGLAP 211
Query: 219 ---ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
+ S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S T
Sbjct: 212 AVDSQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGTST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ F+G + +FYVKS + P+
Sbjct: 270 RKLGYSSLVLDSTGSTLFANCTDDNIYMFNMTGLKTSPVAVFNGHQNSTFYVKSSLSPDD 329
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 QFLISGSSDEAAYIWKVSMPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWR 389
Query: 393 L 393
L
Sbjct: 390 L 390
>sp|Q6P1W0|DTL_XENTR Denticleless protein homolog OS=Xenopus tropicalis GN=dtl PE=1 SV=1
Length = 713
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 204/392 (52%), Gaps = 47/392 (11%)
Query: 31 DVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFA 90
D T + E+GA PP +F SH+ AV++E+G V L+D+ +
Sbjct: 38 DEHTSYGELGAAV--------PPFGCAFSTVPDMSHVLAVANEEGIVRLYDTECR----- 84
Query: 91 CHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHT 150
+ ++ + +++AH NA+FD+ W+ + ++TASGDQT K+WD + G GH
Sbjct: 85 ----DVQRLVVKEFMAHTNAVFDIAWVPGEHKLVTASGDQTAKLWDVKAGDLIGECKGHQ 140
Query: 151 GSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAH--LLS 208
S+KS+ + +G RDG+ +WD RC N + F + GAH L
Sbjct: 141 CSLKSVAFSKFEKAVFSTGGRDGNIMVWDTRC------NKKDGFYRQVNQITGAHNALDK 194
Query: 209 QS-KRVSRRKA----------ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQI 257
Q+ +V +RK + S+T V++ +DE +I +A AV+ IVK WD R +
Sbjct: 195 QTPSKVKKRKPYVRGLAPSVDSQQSVTVVIF-QDEHTIISAGAVDGIVKVWDLRKNYSAY 253
Query: 258 TQ------AWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPI 311
Q +P+ +S TR G S+L D G L ASC D +Y++N L P+
Sbjct: 254 RQDPVPAKLFPYPGNS----TRKLGYSNLVLDPTGTNLFASCTDDNVYMFNATGLKTEPV 309
Query: 312 QHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNW 371
F G + +FY+K+ + P+ +LSGSSD +AY+WQV+ P+ P+ L H EVT+V W
Sbjct: 310 SVFGGHQNSTFYIKTSVSPDGQFLLSGSSDHSAYIWQVSDPKVPPVTLTGHCQEVTSVAW 369
Query: 372 CPNEAGKIVTSSDDYTVRLWSLENSRCSSMRS 403
C ++ KI T SDD TVR+W L+ S S +S
Sbjct: 370 CQSDFTKIATCSDDNTVRVWRLKRSSEDSAQS 401
>sp|Q6GPU3|DTLB_XENLA Denticleless protein homolog B OS=Xenopus laevis GN=dtl-b PE=2 SV=1
Length = 711
Score = 223 bits (568), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 191/367 (52%), Gaps = 37/367 (10%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F SH+ AV++E+G V L+D+ C + ++ + +++AH
Sbjct: 47 GRAVPPFGCAFSTVPGMSHVLAVANEEGIVRLYDTE-------CG--DMQRLVVKEFMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FD+ W+ + ++TASGDQT K+WD + + G GH S+KS+ +
Sbjct: 98 TNAVFDIAWVPGEHKLVTASGDQTAKLWDVKAGELIGECKGHQCSLKSVAFSKFERAVFS 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSK---RVSRRKAA----- 219
+G RDG+ +WD RC N + F + GAH + +V +RK +
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQITGAHNAIDKQTPSKVKKRKPSIRGLA 211
Query: 220 ----SMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQ------AWPHAESSSA 269
S +V+ +DE ++ +A AV+ +VK WD R + Q +P+ +S
Sbjct: 212 PSVDSQQSVTVVIFQDEYTVISAGAVDGVVKIWDLRKNYSTYRQDPVPVKLFPYPGNS-- 269
Query: 270 KETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEIC 329
TR G SSL D G L ASC D +Y++N L P+ F G + +FY+K+ +
Sbjct: 270 --TRKLGYSSLVLDPTGTNLFASCTDDNVYMFNATGLKTDPVSVFRGHQNSTFYIKASVS 327
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ +LSGSSD +AY+WQV+ P A PI L H EVT+V WC ++ KI T SDD TVR
Sbjct: 328 PDGQFLLSGSSDHSAYIWQVSDPLAAPINLIGHCQEVTSVAWCQSDFTKIATCSDDNTVR 387
Query: 390 LWSLENS 396
+W L S
Sbjct: 388 IWRLNRS 394
>sp|Q4V837|DTLA_XENLA Denticleless protein homolog A OS=Xenopus laevis GN=dtl-a PE=2 SV=1
Length = 710
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/412 (31%), Positives = 203/412 (49%), Gaps = 43/412 (10%)
Query: 9 FFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVTVEHH------GEETPPLAVSFCKTS 62
F +V ++ G+ + P+ + + V + H G PP +F
Sbjct: 2 LFRSVMNKPRLGYGQKGAPFTYPLQSLLQCYQCVKQDEHISYGELGMPVPPFGCAFSTVP 61
Query: 63 KNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTN 122
SH+ AV++E+G V L+D+ + + ++ + +++AH NA+FD+ W+ +
Sbjct: 62 DMSHVLAVANEEGIVRLYDTECR---------DMQRLLMKEFMAHTNAVFDIAWVPGEHK 112
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
++TASGDQT K+WD + G GH S+KS+ + +G RDG+ +WD RC
Sbjct: 113 LVTASGDQTAKLWDVMAGELIGECRGHQCSLKSVSFSKFERAVFSTGGRDGNIMMWDTRC 172
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSI------------TSVLYLK 230
+ F + GAH + S+ K SI +V+ +
Sbjct: 173 SKK------DGFYRQVNQITGAHNAIDKQTPSKMKKRKPSIRGLAPSVDSQQSVTVVIFQ 226
Query: 231 DEVSIATASAVNSIVKFWDTRNLKAQITQ------AWPHAESSSAKETRLHGISSLSQDS 284
DE +I +A AV+ +VK WD R + Q +P+ +S TR G SSL D
Sbjct: 227 DEYTIISAGAVDGVVKIWDLRKNYSAYRQDPVPVKHFPYPGNS----TRKLGYSSLVLDP 282
Query: 285 NGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNA 344
G L ASC D +Y++N L P+ F G + +FY+K+ + P+ +LSGSSD +A
Sbjct: 283 TGTNLFASCTDDNVYMFNATGLKTDPVSIFRGHQNSTFYIKASVSPDGQFLLSGSSDHSA 342
Query: 345 YVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENS 396
Y+WQV+ P A P+ L H EVT+V WC ++ KI T SDD TVR+W L+ S
Sbjct: 343 YIWQVSDPMAAPVTLMGHCQEVTSVAWCQSDFTKIATCSDDNTVRVWRLKRS 394
>sp|Q9NZJ0|DTL_HUMAN Denticleless protein homolog OS=Homo sapiens GN=DTL PE=1 SV=3
Length = 730
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 185/361 (51%), Gaps = 32/361 (8%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAH 107
G PP +F H+ AV++E+G+V L+++ + C +E W+AH
Sbjct: 47 GVPVPPFGCTFSSAPNMEHVLAVANEEGFVRLYNTESQSFRKKCFKE---------WMAH 97
Query: 108 QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILV 167
NA+FDL W+ + ++TA+GDQT K WD + + G GH S+KS+ +
Sbjct: 98 WNAVFDLAWVPGELKLVTAAGDQTAKFWDVKAGELIGTCKGHQCSLKSVAFSKFEKAVFC 157
Query: 168 SGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAAS------- 220
+G RDG+ +WD RC N + F + GAH S + S+ K
Sbjct: 158 TGGRDGNIMVWDTRC------NKKDGFYRQVNQISGAHNTSDKQTPSKPKKKQNSKGLAP 211
Query: 221 -----MSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS---SAKET 272
S+T VL+ +DE ++ +A AV+ I+K WD R Q P A S T
Sbjct: 212 SVDFQQSVTVVLF-QDENTLVSAGAVDGIIKVWDLRKNYTAYRQE-PIASKSFLYPGSST 269
Query: 273 RLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNA 332
R G SSL DS G L A+C D IY++N+ L P+ F+G + +FYVKS + P+
Sbjct: 270 RKLGYSSLILDSTGSTLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDD 329
Query: 333 SHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWS 392
++SGSSD AY+W+V+ P P L H EVT+V WCP++ KI T SDD T+++W
Sbjct: 330 QFLVSGSSDEAAYIWKVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIWR 389
Query: 393 L 393
L
Sbjct: 390 L 390
>sp|Q5RHI5|DTL_DANRE Denticleless protein homolog OS=Danio rerio GN=dtl PE=2 SV=1
Length = 647
Score = 218 bits (556), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 183/356 (51%), Gaps = 36/356 (10%)
Query: 52 PPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAI 111
PP +F + AV++E+G+V++F++ K + + + +W AH NA+
Sbjct: 52 PPFGCTFSSAHGQQNCLAVANEEGFVTIFNTGEK-----------QSSVLKEWQAHDNAV 100
Query: 112 FDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSR 171
FD+ W+ ++TASGDQT ++WD G GH S+KS+ + + +G R
Sbjct: 101 FDIAWVPGTNCLVTASGDQTARLWDVITGDLLGTFKGHQCSLKSVAFYKQEKAVFSTGGR 160
Query: 172 DGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS--------I 223
DG+ IWD RC + F + GAH+ + +K M+ +
Sbjct: 161 DGNIMIWDTRCSKK------DGFYRQVKQISGAHMKPERFTPQTKKRRGMAPPVDSQQGV 214
Query: 224 TSVLYLKDEVSIATASAVNSIVKFWDTR-NLKAQ-----ITQAWPHAESSSAKETRLHGI 277
T VL+ DE + ++ AV+ I+K WD R N A QA+P+ S TR G
Sbjct: 215 TVVLFC-DETKLISSGAVDGIIKMWDLRRNYTAYHQNPLPLQAYPYPGSC----TRKLGY 269
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILS 337
S LS D G L ++C D IY++N+ L P+ FSG SFYVKS + P+ + S
Sbjct: 270 SGLSLDYTGSRLFSNCTDDNIYMFNISGLKTTPVAVFSGHSNSSFYVKSTVSPDDQFLAS 329
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
GSSD N Y+W+++ P+ P+ L+ H EVT+V WCP + KI + SDD TVR+W L
Sbjct: 330 GSSDHNVYIWKISDPKQAPMMLQGHSQEVTSVAWCPTDFTKIASCSDDNTVRIWRL 385
>sp|Q24371|L2DTL_DROME Protein lethal(2)denticleless OS=Drosophila melanogaster GN=l(2)dtl
PE=1 SV=2
Length = 769
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 172/356 (48%), Gaps = 23/356 (6%)
Query: 50 ETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQN 109
E P + F HI A+++EDG ++L D+ ++ E+ + H N
Sbjct: 50 EPPIFSAKFANCDGYRHILAIANEDGKITLQDTTQR-------NHQPEEQSLVGPQCHFN 102
Query: 110 AIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTG--ALMGHTGSIKSLCSHPTNSDILV 167
A+FDL W ++ASGD T ++W+ G + +GHT S+KS T+ +
Sbjct: 103 AVFDLEWAPGQMRFVSASGDHTARLWEVAGSGIRGLNSYVGHTRSVKSAAFKRTDPAVFA 162
Query: 168 SGSRDGSFAIWDLRCK-----SSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
+G RDG+ IWD+R +S NC ++S +SQ K+ +R +
Sbjct: 163 TGGRDGAILIWDIRANLNMDLTSRVDNC----IYSGHTGGPGTPVSQRKQRTRTPKMAGG 218
Query: 223 ITSV----LYLKDEVSIATASAVNSIVKFWDTR-NLKAQITQAWPHAESSSAKETRLHGI 277
TS L +D ++ + A + ++K WD R N A + P + A + G
Sbjct: 219 TTSSSITGLAFQDNDTLISCGAGDGVIKVWDLRRNYTAYKKEPLPRHKLPYAGSSTFRGF 278
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILS 337
++L D++G L A+CMD+ IY YN+ + P+ + G +FY+KS + P+ ++LS
Sbjct: 279 TNLIVDASGTRLYANCMDNTIYCYNLASYSQRPLACYKGLLNSTFYIKSCLSPDGKYLLS 338
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
GSSD AY+W ++ + + L H EVT V W + IVT SDD ++W +
Sbjct: 339 GSSDERAYIWNLDHAEEPLVALAGHTVEVTCVAWGSSHDCPIVTCSDDARHKIWRI 394
>sp|Q10990|CDT2_SCHPO Cell division cycle protein cdt2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cdt2 PE=1 SV=1
Length = 490
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 164/365 (44%), Gaps = 55/365 (15%)
Query: 53 PLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKA----RISDWVAHQ 108
P + F + N + AV E G + LFDSR R+N E RI W+AH
Sbjct: 130 PFCLGF---ANNESLLAVCTETGALELFDSR------FYDRQNEENQPSARRIHGWLAHN 180
Query: 109 NAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCT------GALMGHTGSIK--SLCSH- 159
NAIF + + K+D+ + T+SGDQT K++D ++C G H+ S+K + C+
Sbjct: 181 NAIFSVNFSKDDSLLATSSGDQTSKVFDLSTQQCITRLGRRGVDGYHSHSVKQVNFCNDS 240
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
P N LVS SRDGS WD+R + G H R+ +
Sbjct: 241 PYN---LVSCSRDGSIIFWDMRTH--------------GITIDGEHFQKPVLRIRKAHEN 283
Query: 220 S---MSITSVLYLKDEVS-IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKET-RL 274
S SITS +L S + ++ + NS +K WD R + + P A + + R
Sbjct: 284 SGRDCSITSATWLPQSTSQVISSCSANSALKLWDLRTV--HTVRPLPAATTPELTTSKRD 341
Query: 275 HGISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSG--CRIESFYVKSEICPNA 332
G++++ +G + A+ D IY Y+ L+ G + + RI SFYVK P+
Sbjct: 342 FGVTNVCTSPDGERIYAASRDSIIYEYSSRHLNSGFCKTYKDPRLRISSFYVKLACSPDG 401
Query: 333 SHILSGS-----SDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYT 387
+ + G + G + + H +VTAV+W + G++ + SDD +
Sbjct: 402 ATLACGGGVQDKTSGVVVFDTTRNCSSSAMLTGGHTKDVTAVDW--SSEGQLASISDDGS 459
Query: 388 VRLWS 392
VR+W+
Sbjct: 460 VRVWN 464
>sp|Q55AR8|SNR40_DICDI U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium
discoideum GN=snrnp40 PE=3 SV=1
Length = 355
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 45/293 (15%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I +L W + I TA D++I +WD+ K + + H+G + S C +
Sbjct: 103 GHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPL 162
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ SGS D S I+D R K S HL +TS
Sbjct: 163 VASGSDDRSARIFDTRSKGS------------------THLFQH----------KYPVTS 194
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
V + D ++++++ WD RN + + H ++ I+S S +
Sbjct: 195 VCF-SDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDT----------ITSTSVSKD 243
Query: 286 GVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGCR--IESFYVKSEICPNASHILSGSSD 341
G +L ++ MD+ ++++ I+ F+G + E +KS + I GSSD
Sbjct: 244 GAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSD 303
Query: 342 GNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
Y+W N Q L H G V V + PNE I + S D T+ L ++
Sbjct: 304 RQVYIWDTNTKQLQYC-LPGHSGTVNEVTFHPNEP-IIASCSSDKTIYLGEIK 354
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 73/348 (20%)
Query: 46 HHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWV 105
H GE V CK N A + D + L++ ++A +
Sbjct: 66 HEGE------VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK------------ 107
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS DG+ +WD+R K++ ++F + V+ A + + TS
Sbjct: 168 VCTGSDDGTVKLWDIRKKAA-----VQTFQNTYQVL----------------AVTFNDTS 206
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
D++ + +++ +K WD R K T HA+S ++ LS S
Sbjct: 207 -----DQI---ISGGIDNDIKVWDLRQNKLTYTMR-GHADS----------VTGLSLSSE 247
Query: 286 GVFLTASCMDHRIYLYNV---------LQLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
G +L ++ MD+ + +++V +++ +G + +F E ++ P+ S I
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-----EKNLLRCSWSPDGSKIA 302
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 303 AGSADRFVYVWDTTSRRV-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 35.4 bits (80), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 285 NGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDG 342
NG L ++ D I L+NV + ++ SG +E Y + S + S S+D
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT-----DGSMLFSASTDK 132
Query: 343 NAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGK--IVTSSDDYTVRLWSL 393
VW + ++K G + VN C P G + T SDD TV+LW +
Sbjct: 133 TVAVWDSETGE----RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 147/348 (42%), Gaps = 73/348 (20%)
Query: 46 HHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWV 105
H GE V CK N A + D + L++ ++A +
Sbjct: 65 HEGE------VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK------------ 106
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S +
Sbjct: 107 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS DG+ +WD+R K++ ++F + V+ A + + TS
Sbjct: 167 VCTGSDDGTVKLWDIRKKAA-----IQTFQNTYQVL----------------AVTFNDTS 205
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
D++ + +++ +K WD R K T HA+S ++ LS S
Sbjct: 206 -----DQI---ISGGIDNDIKVWDLRQNKLTYTMR-GHADS----------VTGLSLSSE 246
Query: 286 GVFLTASCMDHRIYLYNV---------LQLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
G +L ++ MD+ + +++V +++ +G + +F E ++ P+ S I
Sbjct: 247 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-----EKNLLRCSWSPDGSKIA 301
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+GS+D YVW + KL H G + V + P+E I SSD
Sbjct: 302 AGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 35.4 bits (80), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 285 NGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDG 342
NG L ++ D I L+NV + ++ SG +E Y + S + S S+D
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT-----DGSMLFSASTDK 131
Query: 343 NAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGK--IVTSSDDYTVRLWSL 393
VW + ++K G + VN C P G + T SDD TV+LW +
Sbjct: 132 TVAVWDSETGE----RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 73/348 (20%)
Query: 46 HHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWV 105
H GE V CK N A + D + L++ ++A +
Sbjct: 66 HEGE------VYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLK------------ 107
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H A+ +L + + + + +AS D+T+ +WD+E + L GHT + S +
Sbjct: 108 GHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 167
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS DG+ +WD+R K++ ++F + V+ A + + TS
Sbjct: 168 VCTGSDDGTVKLWDIRKKAA-----IQTFQNTYQVL----------------AVTFNDTS 206
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
D++ + +++ +K WD R K T HA+S ++ LS S
Sbjct: 207 -----DQI---ISGGIDNDIKVWDLRQNKLTYTMR-GHADS----------VTGLSLSSE 247
Query: 286 GVFLTASCMDHRIYLYNV---------LQLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
G +L ++ MD+ + +++V +++ +G + +F E ++ P+ S I
Sbjct: 248 GSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNF-----EKNLLRCSWSPDGSKIA 302
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+GS+D YVW + KL H G + V + P+E + SSD
Sbjct: 303 AGSADRFVYVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIILSASSD 349
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Query: 285 NGVFLTASCMDHRIYLYNVLQL--DKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDG 342
NG L ++ D I L+NV + ++ SG +E Y + S + S S+D
Sbjct: 78 NGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNT-----DGSMLFSASTDK 132
Query: 343 NAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGK--IVTSSDDYTVRLWSL 393
VW + ++K G + VN C P G + T SDD TV+LW +
Sbjct: 133 TVAVWDSETGE----RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 182
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 143/317 (45%), Gaps = 52/317 (16%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H ++ + + + + + T SGDQT+++WD +C GHT ++S+ ++ +
Sbjct: 988 GHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVV-FSSDGAM 1046
Query: 166 LVSGSRDGSFAIWDL---RCKSSPK--SNCAESFVFSSAVVKGAHL-------------L 207
L SGS D + +WD+ C + + ++C S VFS GA L +
Sbjct: 1047 LASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSP---DGAMLASGGDDQIVRLWDI 1103
Query: 208 SQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESS 267
S + + + + +++ + V++A S+ + IV+ WD + K T
Sbjct: 1104 SSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS-DQIVRLWDISSKKCLYTL-------- 1154
Query: 268 SAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNV-----LQLDKGPIQHFSGCRIESF 322
+ + +++++ +G L + D + L+++ L + +G H S
Sbjct: 1155 ---QGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQG---HTS------- 1201
Query: 323 YVKSEIC-PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVT 381
+V S + P+ S + SGSSD +W++N + + H V +V + P + + +
Sbjct: 1202 WVNSVVFNPDGSTLASGSSDQTVRLWEINSSKC-LCTFQGHTSWVNSVVFNP-DGSMLAS 1259
Query: 382 SSDDYTVRLWSLENSRC 398
S D TVRLW + +S+C
Sbjct: 1260 GSSDKTVRLWDISSSKC 1276
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 150/362 (41%), Gaps = 67/362 (18%)
Query: 62 SKNSHIFAVSDEDGYVSLFD--SRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKE 119
S++ + A +D V L+D S + L +F H +R+ V N++
Sbjct: 915 SQDGKMLASGSDDQTVRLWDISSGQCLKTFKGH-----TSRVRSVVFSPNSLM------- 962
Query: 120 DTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
+ + S DQT+++WD +C GHTG + S+ + S +L +GS D + +WD
Sbjct: 963 ---LASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS-MLATGSGDQTVRLWD 1018
Query: 180 LRCKS-----SPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR-------------KAASM 221
+ ++C S VFSS GA L S S + R + +
Sbjct: 1019 ISSSQCFYIFQGHTSCVRSVVFSS---DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075
Query: 222 SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISS-- 279
+ SV++ D +A+ + IV+ WD SS L G +S
Sbjct: 1076 CVRSVVFSPDGAMLASGGD-DQIVRLWDI---------------SSGNCLYTLQGYTSWV 1119
Query: 280 --LSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKS-EICPNASHIL 336
L NGV L D + L+++ K + G + +V + P+ + +
Sbjct: 1120 RFLVFSPNGVTLANGSSDQIVRLWDISS--KKCLYTLQG---HTNWVNAVAFSPDGATLA 1174
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENS 396
SGS D +W ++ + I L+ H V +V + P + + + S D TVRLW + +S
Sbjct: 1175 SGSGDQTVRLWDISSSKCLYI-LQGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSS 1232
Query: 397 RC 398
+C
Sbjct: 1233 KC 1234
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 55/362 (15%)
Query: 56 VSFCKTSKNSHIFAVSDEDGYVSLFD--SRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
V F S N A D V L+D S++ L + H ++WV NA+
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGH---------TNWV---NAV-- 1164
Query: 114 LCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDG 173
+ + + + SGDQT+++WD KC L GHT + S+ +P S L SGS D
Sbjct: 1165 -AFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGS-TLASGSSDQ 1222
Query: 174 SFAIWDLR-----CKSSPKSNCAESFVF--------SSAVVKGAHL--LSQSKRVSRRKA 218
+ +W++ C ++ S VF S + K L +S SK + +
Sbjct: 1223 TVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQG 1282
Query: 219 ASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGIS 278
+ + SV + D +A+ S + V+ W+ + K T + +S
Sbjct: 1283 HTNWVNSVAFNPDGSMLASGSG-DQTVRLWEISSSKCLHT-----------FQGHTSWVS 1330
Query: 279 SLSQDSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHIL 336
S++ +G L + D + L+++ G + F G + +V S I P+ + +
Sbjct: 1331 SVTFSPDGTMLASGSDDQTVRLWSI---SSGECLYTFLG---HTNWVGSVIFSPDGAILA 1384
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENS 396
SGS D +W ++ + L+ H+ V ++ + P + + + SDD TVRLW++ +
Sbjct: 1385 SGSGDQTVRLWSISSGKC-LYTLQGHNNWVGSIVFSP-DGTLLASGSDDQTVRLWNISSG 1442
Query: 397 RC 398
C
Sbjct: 1443 EC 1444
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 153/372 (41%), Gaps = 74/372 (19%)
Query: 54 LAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFD 113
L V+F S + +FA D G V +++ C N+ WV N++
Sbjct: 868 LTVAF---SPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNS-------WV---NSVG- 913
Query: 114 LCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRD 172
+D +L + S DQT+++WD +C GHT ++S+ P NS +L SGS D
Sbjct: 914 ---FSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSP-NSLMLASGSSD 969
Query: 173 GSFAIWDL---RCKSSPKSNCAESFVFSSAV-VKGAHLLSQSKRVSRR------------ 216
+ +WD+ C + + +V+S A + G+ L + S + R
Sbjct: 970 QTVRLWDISSGECLYIFQGHTG--WVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYI 1027
Query: 217 -KAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLH 275
+ + + SV++ D +A+ S + V+ WD SS L
Sbjct: 1028 FQGHTSCVRSVVFSSDGAMLASGSD-DQTVRLWDI---------------SSGNCLYTLQ 1071
Query: 276 G----ISSLSQDSNGVFLTASCMDHRIYLY-----NVLQLDKGPIQHFSGCRIESFYVKS 326
G + S+ +G L + D + L+ N L +G + S R F
Sbjct: 1072 GHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQG---YTSWVRFLVF---- 1124
Query: 327 EICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDY 386
PN + +GSSD +W ++ + L+ H V AV + P+ A + + S D
Sbjct: 1125 --SPNGVTLANGSSDQIVRLWDISSKKC-LYTLQGHTNWVNAVAFSPDGA-TLASGSGDQ 1180
Query: 387 TVRLWSLENSRC 398
TVRLW + +S+C
Sbjct: 1181 TVRLWDISSSKC 1192
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H N + + + + T + + S DQT+++W+ +C L GH S++S+ + ++ I
Sbjct: 1408 GHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSV-AFSSDGLI 1466
Query: 166 LVSGSRDGSFAIWDLRCKSSPKS 188
L SGS D + +WD++ K+
Sbjct: 1467 LASGSDDETIKLWDVKTGECIKT 1489
>sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1
Length = 579
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 122/303 (40%), Gaps = 51/303 (16%)
Query: 96 AEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGH-TGSIK 154
E+ + ++ H A+ D+C+ T L+A+ D+ +K+WD E +C
Sbjct: 320 GERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCV 379
Query: 155 SLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVS 214
++ V+G D WD+R S +V+
Sbjct: 380 KFNPDEDKQNLFVAGMSDKKIVQWDIR---------------SGEIVQ---------EYD 415
Query: 215 RRKAASMSITSVLYLKDEVSIATASAVNSI-VKFWDTRNLKAQITQAWPHAESSSAKETR 273
R A + +++++ + + S S+ V WD + E
Sbjct: 416 RHLGA---VNTIVFVDENRRFVSTSDDKSLRVWEWDIP------------VDFKYIAEPS 460
Query: 274 LHGISSLSQDSNGVFLTASCMDHRIYLY---NVLQLDKGPIQHFSGCRIESFYVKSEICP 330
+H + +++ NG +L MD++I ++ N +L+K I F G + + + + P
Sbjct: 461 MHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKI--FKGHMVAGYACQVDFSP 518
Query: 331 NASHILSGSSDG--NAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
+ S+++SG +G N + W+ K + + K+HD W P+E K++T D +
Sbjct: 519 DMSYVISGDGNGKLNIWDWKTTKLYS---RFKAHDKVCIGAVWHPHETSKVITCGWDGLI 575
Query: 389 RLW 391
+LW
Sbjct: 576 KLW 578
>sp|Q9DC48|PRP17_MOUSE Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=1 SV=1
Length = 579
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 119/295 (40%), Gaps = 51/295 (17%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGH-TGSIKSLCSHPTN 162
++ H A+ D+C+ T L+A+ D+ +K+WD E +C
Sbjct: 328 FIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDK 387
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
++ V+G D WD+R S +V+ R A
Sbjct: 388 QNLFVAGMSDKKIVQWDIR---------------SGEIVQ---------EYDRHLGA--- 420
Query: 223 ITSVLYLKDEVSIATASAVNSI-VKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLS 281
+ +++++ + + S S+ V WD + E +H + +++
Sbjct: 421 VNTIVFVDENRRFVSTSDDKSLRVWEWDIP------------VDFKYIAEPSMHSMPAVT 468
Query: 282 QDSNGVFLTASCMDHRIYLY---NVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSG 338
NG +L MD++I ++ N +L+K I F G + + + + P+ S+++SG
Sbjct: 469 LSPNGKWLACQSMDNQILIFGAQNRFRLNKKKI--FKGHMVAGYACQVDFSPDMSYVISG 526
Query: 339 SSDG--NAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLW 391
+G N + W+ K + + K+HD W P+E K++T D ++LW
Sbjct: 527 DGNGKLNIWDWKTTKLYS---RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 328 ICPNASHIL-SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAV-NWCPNEAG-KIVTSSD 384
+ P + H+L S S D +W+V D L++ G AV + C N AG + ++++
Sbjct: 296 LFPLSGHLLLSCSMDCKIKLWEV---YGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAY 352
Query: 385 DYTVRLWSLENSRCSSMRSPSSVRRRVMAIPSTECRKLFMNGEPG-----WLAKGSDRSY 439
D ++LW E +C S + V V P + + LF+ G W + +
Sbjct: 353 DRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQ 412
Query: 440 NSDDVLNQINS--SDPKNMPIIRTPEAQKKKIPSFDTKEAFEKTPEASLNS-PSSVLNP 495
D L +N+ +N + T + + ++ +D F+ E S++S P+ L+P
Sbjct: 413 EYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSP 471
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 147/348 (42%), Gaps = 73/348 (20%)
Query: 46 HHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWV 105
H GE V CK N A + D + L++ ++A +
Sbjct: 65 HEGE------VYCCKFHPNGSTLASAGFDRLILLWNVYGDCGNYATLK------------ 106
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
+ A+ +L + + + + +AS D+T+ +WD+E + L GHT + S +
Sbjct: 107 GYSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL 166
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS DG+ +WD+R K++ ++F + V+ A + + TS
Sbjct: 167 VCTGSDDGTVKLWDIRKKAA-----IQTFQNTYQVL----------------AVTFNDTS 205
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
D++ + +++ +K WD R K T HA+S ++ LS S
Sbjct: 206 -----DQI---ISGGIDNDIKVWDLRQNKLTYTMR-GHADS----------VTGLSLSSE 246
Query: 286 GVFLTASCMDHRIYLYNV---------LQLDKGPIQHFSGCRIESFYVKSEICPNASHIL 336
G +L ++ MD+ + +++V +++ +G + +F E ++ P+ S I
Sbjct: 247 GSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNF-----EKNLLRCSWSPDGSKIA 301
Query: 337 SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+GS+D + VW + KL H G + V + P+E I SSD
Sbjct: 302 AGSADRSVCVWDTTSRRI-LYKLPGHAGSINEVAFHPDEPIIISASSD 348
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 15/141 (10%)
Query: 43 TVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARIS 102
T+ H + L++S S+ S++ + + D V ++D R P C +I
Sbjct: 230 TMRGHADSVTGLSLS----SEGSYLLS-NAMDNTVRVWDVRPFAPKERC-------VKIF 277
Query: 103 DWVAH--QNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
H + + W + + I S D+++ +WD ++ L GH GSI + HP
Sbjct: 278 QGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHP 337
Query: 161 TNSDILVSGSRDGSFAIWDLR 181
+ I++S S D + +++
Sbjct: 338 -DEPIIISASSDKRLYMGEIQ 357
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 285 NGVFLTASCMDHRIYLYNVLQ--LDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDG 342
NG L ++ D I L+NV + ++ +SG +E Y + S + S S+D
Sbjct: 77 NGSTLASAGFDRLILLWNVYGDCGNYATLKGYSGAVMELHYNT-----DGSMLFSASTDK 131
Query: 343 NAYVWQVNKPQADPIKLKSHDGEVTAVNWC-PNEAGK--IVTSSDDYTVRLWSL 393
VW + ++K G + VN C P G + T SDD TV+LW +
Sbjct: 132 TVAVWDSETGE----RVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI 181
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 128/311 (41%), Gaps = 38/311 (12%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +++ + + + + + SGD+TIKIWD CT L GH GS+ S+ P +
Sbjct: 965 GHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRV 1024
Query: 166 LVSGSRDGSFAIWDLRCKSSPKS-----NCAESFVFS---SAVVKGA--HLLSQSKRVSR 215
SGS D + IWD + ++ +S VFS V G+ H + VS
Sbjct: 1025 -ASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSG 1083
Query: 216 RKAASM-----SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAK 270
++ S+ SV + D +A+ S ++ +K WD A + +
Sbjct: 1084 TCTQTLEGHGDSVWSVAFSPDGQRVASGS-IDGTIKIWDA-------------ASGTCTQ 1129
Query: 271 ETRLHG--ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEI 328
HG + S++ +G + + +D I +++ G ++S
Sbjct: 1130 TLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSV----AF 1185
Query: 329 CPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTV 388
P+ + SGSSD +W L+ H G V +V + P+ ++ + S D T+
Sbjct: 1186 SPDGQRVASGSSDKTIKIWDTASGTCTQ-TLEGHGGWVQSVAFSPD-GQRVASGSSDNTI 1243
Query: 389 RLWSLENSRCS 399
++W + C+
Sbjct: 1244 KIWDTASGTCT 1254
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 48/316 (15%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H +++ + + + + + S D+TIKIWDA CT L GH G ++S+ P +
Sbjct: 881 GHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRV 940
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVS----------- 214
SGS D + IWD + C ++ + V +RV+
Sbjct: 941 -ASGSDDHTIKIWD-----AASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIW 994
Query: 215 ---------RRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAE 265
+ S+ SV + D +A+ S + +K WDT A
Sbjct: 995 DTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD-DKTIKIWDT-------------AS 1040
Query: 266 SSSAKETRLHG--ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFY 323
+ + HG + S+ +G + + DH I +++ + G + S
Sbjct: 1041 GTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSV- 1099
Query: 324 VKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS 383
P+ + SGS DG +W L+ H G V +V + P+ ++ + S
Sbjct: 1100 ---AFSPDGQRVASGSIDGTIKIWDAASGTCTQ-TLEGHGGWVHSVAFSPD-GQRVASGS 1154
Query: 384 DDYTVRLWSLENSRCS 399
D T+++W + C+
Sbjct: 1155 IDGTIKIWDAASGTCT 1170
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 101/271 (37%), Gaps = 50/271 (18%)
Query: 131 TIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNC 190
TI + +AE CT L GH S+ S+ + + + SGS D + IWD
Sbjct: 822 TISVVEAEWNACTQTLEGHGSSVLSV-AFSADGQRVASGSDDKTIKIWD----------- 869
Query: 191 AESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDT 250
+A G L + S+ SV + D +A+ S + +K WD
Sbjct: 870 -------TASGTGTQTL---------EGHGGSVWSVAFSPDRERVASGSD-DKTIKIWDA 912
Query: 251 RNLKAQITQAWPHAESSSAKETRLHG--ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDK 308
A + + HG + S++ +G + + DH I +++
Sbjct: 913 -------------ASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTC 959
Query: 309 GPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTA 368
G + S P+ + SGS D +W L+ H G V +
Sbjct: 960 TQTLEGHGSSVLSV----AFSPDGQRVASGSGDKTIKIWDTASGTCTQ-TLEGHGGSVWS 1014
Query: 369 VNWCPNEAGKIVTSSDDYTVRLWSLENSRCS 399
V + P+ ++ + SDD T+++W + C+
Sbjct: 1015 VAFSPD-GQRVASGSDDKTIKIWDTASGTCT 1044
>sp|Q498M4|WDR5_RAT WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2
SV=1
Length = 334
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++AS D+T+KIWD KC L GH+ + C+ S++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNL 143
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD++ K + A S +++
Sbjct: 144 IVSGSFDESVRIWDVK---------------------------TGKCLKTLPAHSDPVSA 176
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 177 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 222
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS
Sbjct: 223 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V + P E I+ S+ +D T++LW
Sbjct: 280 DNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDKTIKLW 330
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+SS+ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL----- 101
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++S S D +W V+ + LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 102 -LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 158
Query: 394 ENSRC 398
+ +C
Sbjct: 159 KTGKC 163
>sp|P61965|WDR5_MOUSE WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=1 SV=1
Length = 334
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++AS D+T+KIWD KC L GH+ + C+ S++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNL 143
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD++ K + A S +++
Sbjct: 144 IVSGSFDESVRIWDVK---------------------------TGKCLKTLPAHSDPVSA 176
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 177 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 222
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS
Sbjct: 223 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V + P E I+ S+ +D T++LW
Sbjct: 280 DNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDKTIKLW 330
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+SS+ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL----- 101
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++S S D +W V+ + LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 102 -LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 158
Query: 394 ENSRC 398
+ +C
Sbjct: 159 KTGKC 163
>sp|P61964|WDR5_HUMAN WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1
Length = 334
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++AS D+T+KIWD KC L GH+ + C+ S++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNL 143
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD++ K + A S +++
Sbjct: 144 IVSGSFDESVRIWDVK---------------------------TGKCLKTLPAHSDPVSA 176
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 177 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 222
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS
Sbjct: 223 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V + P E I+ S+ +D T++LW
Sbjct: 280 DNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDKTIKLW 330
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+SS+ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL----- 101
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++S S D +W V+ + LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 102 -LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 158
Query: 394 ENSRC 398
+ +C
Sbjct: 159 KTGKC 163
>sp|Q2KIG2|WDR5_BOVIN WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1
Length = 334
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 129/294 (43%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++AS D+T+KIWD KC L GH+ + C+ S++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNL 143
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD++ K + A S +++
Sbjct: 144 IVSGSFDESVRIWDVK---------------------------TGKCLKTLPAHSDPVSA 176
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 177 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 222
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS
Sbjct: 223 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V + P E I+ S+ +D T++LW
Sbjct: 280 DNLVYIWNLQTKEIVQ-KLQGHTDVVISTACHPTE--NIIASAALENDKTIKLW 330
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+SS+ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL----- 101
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++S S D +W V+ + LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 102 -LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 158
Query: 394 ENSRC 398
+ +C
Sbjct: 159 KTGKC 163
>sp|Q5M786|WDR5_XENTR WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2
SV=1
Length = 334
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++AS D+T+KIWD KC L GH+ + C+ S++
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-FCCNFNPQSNL 143
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD++ K + A S +++
Sbjct: 144 IVSGSFDESVRIWDVK---------------------------TGKCLKTLPAHSDPVSA 176
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 177 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 222
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++ + E + + + I+SGS
Sbjct: 223 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSE 279
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V + P E I+ S+ +D T++LW
Sbjct: 280 DNLVYIWNLQTKEVVQ-KLQGHTDVVISTACHPTE--NIIASAALENDKTIKLW 330
Score = 33.5 bits (75), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+SS+ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNL----- 101
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSL 393
++S S D +W V+ + LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 102 -LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 158
Query: 394 ENSRC 398
+ +C
Sbjct: 159 KTGKC 163
>sp|Q5AZX0|PFS2_EMENI Polyadenylation factor subunit 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=pfs2 PE=3 SV=1
Length = 567
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH +A+ DL W DT L+AS D T+KI+D + C L GH +KS HPT +
Sbjct: 153 AHHDAVRDLAWSPSDTKFLSASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTKG-L 211
Query: 166 LVSGSRDGSFAIWDLRC 182
LVSGS+D WD R
Sbjct: 212 LVSGSKDHQVKFWDPRT 228
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
+H+N + + + + N+L T+S DQT +++D + L GH I +L HP +
Sbjct: 237 SHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMRDICILRGHEKPISTLTWHPVHCS 296
Query: 165 ILVSGSRDGSF 175
++ +GS DGS
Sbjct: 297 LISTGSEDGSL 307
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ + LS S D ++ D + L H+ +V + +W P + G +V+ S D+ V+
Sbjct: 165 PSDTKFLSASDDTTLKIYDFTARTCDTV-LTGHNWDVKSCDWHPTK-GLLVSGSKDHQVK 222
Query: 390 LWSLENSRC 398
W +RC
Sbjct: 223 FWDPRTARC 231
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 113/286 (39%), Gaps = 39/286 (13%)
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS 170
I +C+ + + T + D+T+K+WD KK GH I SL + ++ +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSL-DYSSDGRFIVSGS 388
Query: 171 RDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLK 230
D IWD+ K CA F + V +TSV
Sbjct: 389 GDKKAKIWDIE-----KGKCA--FTLGNEEV----------------GPKNGVTSVAMSP 425
Query: 231 DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLT 290
D +A A ++++IV+ WD + + + E L + S++ +G L
Sbjct: 426 DGRLVA-AGSLDNIVRLWDAQT--GYFLERY---------EGHLDSVYSVAFSPDGKSLA 473
Query: 291 ASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVN 350
+ +D + L+++ + + F + P+ S ++SGS D + W
Sbjct: 474 SGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDP- 532
Query: 351 KPQADPIKLKSHDGEVTAVNWCP--NEAGKIVTSSDDYTVRLWSLE 394
+ + L+ H V +V P N G T S D+ RLW +
Sbjct: 533 RNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWKYD 578
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 33/150 (22%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGAL----MGHTGSIKSLCSH 159
+ H+ I+ L + + I++ SGD+ KIWD EK KC L +G + S+
Sbjct: 365 FYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMS 424
Query: 160 PTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
P + ++ +GS D +WD A++ F + R +
Sbjct: 425 P-DGRLVAAGSLDNIVRLWD-----------AQTGYF----------------LERYEGH 456
Query: 220 SMSITSVLYLKDEVSIATASAVNSIVKFWD 249
S+ SV + D S+A+ S ++ +K WD
Sbjct: 457 LDSVYSVAFSPDGKSLASGS-LDKSLKLWD 485
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNS-- 163
H++ + + + + + +++ S D++++ WD L GH S+ S+ P N+
Sbjct: 501 GHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSH 560
Query: 164 DILVSGSRDGSFAIW 178
+ +GS D +W
Sbjct: 561 GVFATGSGDFRSRLW 575
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/80 (20%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 322 FYVKSEIC--PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKI 379
Y++S +C P+ +++ +G+ D VW ++ + H+ ++ ++++ ++ I
Sbjct: 328 LYIRS-VCFSPDGNYLATGAEDKTVKVWDIHTKKIQHT-FYGHELDIYSLDYS-SDGRFI 384
Query: 380 VTSSDDYTVRLWSLENSRCS 399
V+ S D ++W +E +C+
Sbjct: 385 VSGSGDKKAKIWDIEKGKCA 404
>sp|Q23256|YH92_CAEEL Uncharacterized WD repeat-containing protein ZC302.2
OS=Caenorhabditis elegans GN=ZC302.2 PE=4 SV=1
Length = 501
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
+HQ I D W I +AS D T+KI+D C + GHT + CS S +
Sbjct: 253 SHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYV-FCCSFNPQSSL 311
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ S D + +WD + C + A S ITS
Sbjct: 312 IASAGFDETVRVWDFK-----TGLCVKCI----------------------PAHSDPITS 344
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRL---HG-ISSLS 281
+ Y D ++AT+S + ++ WD A S S +T + H ++ +
Sbjct: 345 ISYNHDGNTMATSS-YDGCIRVWD--------------AASGSCLKTLVDTDHAPVTFVC 389
Query: 282 QDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG +L ++ +D + L++ + P+++++G + + + + + + P HI+SGS
Sbjct: 390 FSPNGKYLLSAQLDSSLKLWDPKKAK--PLKYYNGHKNKKYCLFANMSVPLGKHIISGSE 447
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD---DYTVRLW 391
DG VW + Q I L+ H V A + P I+ S D +R+W
Sbjct: 448 DGRILVWSIQTKQIVQI-LEGHTTPVLATDSHPTL--NIIASGGLEPDNVIRIW 498
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 62 SKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDT 121
S NS A + +D V +FD + S AC R H N +F + + +
Sbjct: 264 SSNSQFIASASDDTTVKIFD----VISGACLRTMR---------GHTNYVFCCSFNPQSS 310
Query: 122 NILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
I +A D+T+++WD + C + H+ I S+ S+ + + + + S DG +WD
Sbjct: 311 LIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSI-SYNHDGNTMATSSYDGCIRVWD 367
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 56 VSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQN---AIF 112
V+F S N + D + L+D ++ P + + H+N +F
Sbjct: 385 VTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKP-------------LKYYNGHKNKKYCLF 431
Query: 113 DLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS-- 170
+ +I++ S D I +W + K+ L GHT + + SHPT +I+ SG
Sbjct: 432 ANMSVPLGKHIISGSEDGRILVWSIQTKQIVQILEGHTTPVLATDSHPT-LNIIASGGLE 490
Query: 171 RDGSFAIW 178
D IW
Sbjct: 491 PDNVIRIW 498
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 125/292 (42%), Gaps = 51/292 (17%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W ++ I +AS D+TIKIWD E K L GH + + +P S++
Sbjct: 86 GHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP-QSNL 144
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D + IWD+ N E +K +S A S +T
Sbjct: 145 IVSGSFDENVRIWDV--------NTGEC----------------TKMIS---AHSDPVTG 177
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
V + +D + + S + V+ WDT Q + KE +S + N
Sbjct: 178 VHFNRDGTLVVSGS-YDGTVRIWDTTT-----GQLLNTISTEDGKE-----VSFVKFSPN 226
Query: 286 GVFLTASCMDH--RIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH-ILSGSSDG 342
G F+ A +D+ R++ YN +K ++ ++G + E + + S I++GS D
Sbjct: 227 GKFVLAGTLDNTLRLWSYNN---NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDN 283
Query: 343 NAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
Y++ + + L H+ V V P E I+ S D +V++W
Sbjct: 284 LIYIYNLQTREIVQ-TLAGHEDVVLTVACHPTE--NIIASGALEKDRSVKIW 332
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDG-EVTAVNWCPNEAGKIVTSSD-DYTV 388
+ + ++SGS DG +W Q + + DG EV+ V + PN GK V + D T+
Sbjct: 183 DGTLVVSGSYDGTVRIWDTTTGQLLN-TISTEDGKEVSFVKFSPN--GKFVLAGTLDNTL 239
Query: 389 RLWSLENSR--CSSMRSPSSVRRRVMAIPSTECRKLFMNG 426
RLWS N++ + + + + + S C K + G
Sbjct: 240 RLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTG 279
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 10/128 (7%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
I S S D +W V + LK H V V++ P ++ IV+ S D VR+W +
Sbjct: 103 ICSASDDKTIKIWDVESGKMVK-TLKGHKEYVFGVSFNP-QSNLIVSGSFDENVRIWDVN 160
Query: 395 NSRCSSMRSPSSVRRRVMAIPSTECRKLFMNGEPGWLAKGSDRSYN--SDDVLNQINSSD 452
C+ M S S V + L ++G G+ R ++ + +LN I++ D
Sbjct: 161 TGECTKMISAHS--DPVTGVHFNRDGTLVVSGS----YDGTVRIWDTTTGQLLNTISTED 214
Query: 453 PKNMPIIR 460
K + ++
Sbjct: 215 GKEVSFVK 222
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 143/359 (39%), Gaps = 78/359 (21%)
Query: 43 TVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARIS 102
T+E H + ++S K S S D V +++ + +C R
Sbjct: 74 TIEGHTK-----SISAVKFSPCGKFLGTSSADKTVKIWN----MSDLSCERT-------- 116
Query: 103 DWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTN 162
H+ + D W + +I+TAS D+T+KI++ K L GHT + C+
Sbjct: 117 -LTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYV-FCCNFNPQ 174
Query: 163 SDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMS 222
S ++VSGS D S IWD+R C ++ A S
Sbjct: 175 SSLVVSGSFDESVRIWDVR-----TGMCVKTL----------------------PAHSDP 207
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQ 282
+++V + +D S+ T+ + + +V+ WDT N Q + E+ +
Sbjct: 208 VSAVSFNRDG-SLITSGSYDGLVRIWDTAN--GQCVKTLVDDENPPVAFVKF-------- 256
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKG-PIQHFSG------CRIESFYVKSEICPNASHI 335
NG ++ +S +D+ + L++ KG ++ + G C +F V I
Sbjct: 257 SPNGKYILSSNLDNTLKLWD---FGKGKTLKQYQGHENNKYCIFANFSVTG-----GKWI 308
Query: 336 LSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
+SGS D YVW + + L+ H V A + P + ++ S D T+R+W
Sbjct: 309 ISGSEDCKIYVWNLQTKEVVQ-SLEGHTQAVIASDCHPMQ--NMIASGALEPDNTIRIW 364
>sp|Q9V3J8|WDS_DROME Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1
Length = 361
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 126/294 (42%), Gaps = 56/294 (19%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I D+ W + +++ S D+T+K+W+ K L GH+ + C+ S++
Sbjct: 112 GHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYV-FCCNFNPQSNL 170
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+VSGS D S IWD+R K + A S +++
Sbjct: 171 IVSGSFDESVRIWDVR---------------------------TGKCLKTLPAHSDPVSA 203
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRN---LKAQITQAWPHAESSSAKETRLHGISSLSQ 282
V + +D S+ +S+ + + + WDT + LK I P +S +
Sbjct: 204 VHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPP-------------VSFVKF 249
Query: 283 DSNGVFLTASCMDHRIYLYNVLQLDKGP-IQHFSGCRIESFYVKSEI-CPNASHILSGSS 340
NG ++ A+ +D+ + L++ KG ++ ++G + E + + + I+SGS
Sbjct: 250 SPNGKYILAATLDNTLKLWD---YSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 306
Query: 341 DGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSS---DDYTVRLW 391
D Y+W + + KL+ H V P E I+ S+ +D T++LW
Sbjct: 307 DNMVYIWNLQSKEVVQ-KLQGHTDTVLCTACHPTE--NIIASAALENDKTIKLW 357
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Query: 277 ISSLSQDSNGVFLTASCMDHRIYLYNVL--QLDKGPIQHFSGCRIESFYVKSEICPNASH 334
+S++ NG +L +S D I ++ + +K H G ++ S +
Sbjct: 75 VSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRL------ 128
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
++SGS D VW+++ ++ LK H V N+ P ++ IV+ S D +VR+W +
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKT-LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 186
Query: 395 NSRC 398
+C
Sbjct: 187 TGKC 190
>sp|Q6P2Y2|WDR69_XENTR Outer row dynein assembly protein 16 homolog OS=Xenopus tropicalis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 120/296 (40%), Gaps = 58/296 (19%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I T S D+T K+W AE KC GHT I L +P S ++ +GS D + +WD++
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLAFNP-QSTLIATGSMDTTAKLWDIQS 208
Query: 183 --KSSPKSNCAESFVFSSAVVKGAHLLSQS-------------KRVSRRKAASMSITSVL 227
++ S A + S G L++ S +R+ I+S
Sbjct: 209 GEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQ 268
Query: 228 YLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ D IATAS S K WD+ N K T E + ++ DS G
Sbjct: 269 FNWDCSLIATASMDKS-CKLWDSLNGKCVATLTGHEDE-----------VLDVTFDSTGQ 316
Query: 288 FLTASCMDHRIYLYNV--------LQLDKGPIQHFSGCRIESFYVKSEICPNA--SHILS 337
+ + D +Y+ L+ +G I S+IC NA + IL+
Sbjct: 317 LVATASADGTARVYSASSRKCLAKLEGHEGEI--------------SKICFNAQGNRILT 362
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEV--TAVNWCPNEAGKIVTSSDDYTVRLW 391
SSD + +W + + + LK H E+ A N+ E I+T S D T R+W
Sbjct: 363 ASSDKTSRLWNPHTGECLQV-LKGHTDEIFSCAFNY---EGNTIITGSKDNTCRIW 414
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 48 GEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFD--SRRKLPSFACHRENAEKARISDWV 105
G E L V+F T + + A + DG ++ SR+ L
Sbjct: 301 GHEDEVLDVTFDSTGQ---LVATASADGTARVYSASSRKCLAKLE--------------- 342
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I +C+ + ILTAS D+T ++W+ +C L GHT I S C+ +
Sbjct: 343 GHEGEISKICFNAQGNRILTASSDKTSRLWNPHTGECLQVLKGHTDEIFS-CAFNYEGNT 401
Query: 166 LVSGSRDGSFAIW 178
+++GS+D + IW
Sbjct: 402 IITGSKDNTCRIW 414
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 27/305 (8%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + ++ + K ++ +T S D+T K+WD + L GH + ++ + D
Sbjct: 90 AHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDK 149
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS D + +W S+ C +F +A + QS ++ SM T+
Sbjct: 150 IATGSFDKTCKLW-----SAETGKCYHTFRGHTAEIVCLAFNPQSTLIA---TGSMDTTA 201
Query: 226 VLY--LKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES-----SSAKETRLHG-- 276
L+ E ++ + I+ IT ++ H S S + L G
Sbjct: 202 KLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHR 261
Query: 277 --ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH 334
ISS + + + + MD L++ L+ + +G E V +
Sbjct: 262 GEISSAQFNWDCSLIATASMDKSCKLWD--SLNGKCVATLTGHEDEVLDVTFD--STGQL 317
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAG-KIVTSSDDYTVRLWSL 393
+ + S+DG A V+ + + KL+ H+GE++ + C N G +I+T+S D T RLW+
Sbjct: 318 VATASADGTARVYSASSRKC-LAKLEGHEGEISKI--CFNAQGNRILTASSDKTSRLWNP 374
Query: 394 ENSRC 398
C
Sbjct: 375 HTGEC 379
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
++ H++ + D+ + + TAS D T +++ A +KC L GH G I +C +
Sbjct: 296 VATLTGHEDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNA 355
Query: 161 TNSDILVSGSRDGSFAIWD 179
+ IL + S D + +W+
Sbjct: 356 QGNRIL-TASSDKTSRLWN 373
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
RI + H+ I + + + I TAS D++ K+WD+ KC L GH + + +
Sbjct: 253 RIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHEDEVLDV-TF 311
Query: 160 PTNSDILVSGSRDGSFAIW 178
+ ++ + S DG+ ++
Sbjct: 312 DSTGQLVATASADGTARVY 330
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 128/294 (43%), Gaps = 57/294 (19%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S + +I++SGS D + +WD+
Sbjct: 1008 IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGV---WSSQMSGNIIISGSTDRTLKVWDMDS 1064
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSI----------------TSV 226
+ C + ++ V+ HL SK VS + A++ + +V
Sbjct: 1065 GA-----CVHTLQGHTSTVRCMHLHG-SKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAV 1118
Query: 227 LYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKET-RLHGISSLSQDSN 285
++ + + + A + +VK W H E T + H S +
Sbjct: 1119 RCVQYDGKLIVSGAYDYMVKIW--------------HPERQECLHTLQGHTNRVYSLQFD 1164
Query: 286 GVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAY 345
G+ + + +D I +++V + G +H + +S E+ N ++SG++D
Sbjct: 1165 GLHVVSGSLDTSIRVWDV---ETGNCKH-TLMGHQSLTSGMELRQNI--LVSGNADSTVK 1218
Query: 346 VWQVNKPQ-----ADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
VW + Q + P K H VT + + + +VTSSDD TV+LW ++
Sbjct: 1219 VWDITTGQCLQTLSGPNK---HHSAVTCLQF---NSRFVVTSSDDGTVKLWDVK 1266
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 27/201 (13%)
Query: 115 CWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGS 174
C + +++ S D T+++WD E+ C L+GH +++ + + ++VSG+ D
Sbjct: 1080 CMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCV---QYDGKLIVSGAYDYM 1136
Query: 175 FAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR------------KAASMS 222
IW + + + S G H++S S S R S
Sbjct: 1137 VKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQS 1196
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQ 282
+TS + L+ +I + +S VK WD + T + P+ S+ +
Sbjct: 1197 LTSGMELRQ--NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQF-------- 1246
Query: 283 DSNGVFLTASCMDHRIYLYNV 303
N F+ S D + L++V
Sbjct: 1247 --NSRFVVTSSDDGTVKLWDV 1265
Score = 34.7 bits (78), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 351 KPQADPIKLKSHDGEV-TAVNWCPNEAGKIVTSSDDYTVRLWSLENSRC 398
+P P LK HD V T + + N +IV+ SDD T+++WS N +C
Sbjct: 982 RPVRKPKVLKGHDDHVITCLQFSGN---RIVSGSDDNTLKVWSAVNGKC 1027
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
I+SGS+D VW ++ + + G + V K+V+ S D T+R+W +E
Sbjct: 1048 IISGSTDRTLKVWDMDSGAC----VHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIE 1103
Query: 395 NSRC 398
C
Sbjct: 1104 QGSC 1107
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 331 NASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRL 390
+ S ++SGS D VW + + + + G + AV + IV+ + DY V++
Sbjct: 1084 HGSKVVSGSRDATLRVWDIEQGSCLHVLV----GHLAAVRCVQYDGKLIVSGAYDYMVKI 1139
Query: 391 WSLENSRC 398
W E C
Sbjct: 1140 WHPERQEC 1147
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 50/288 (17%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
HQ I L + + T I T S D T K+WD E + L GH I SL T D+
Sbjct: 177 GHQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSL-GFNTGGDL 235
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+V+GS D +WD+R C H+LS + +S T
Sbjct: 236 IVTGSFDHDSRLWDVR-----TGQC-------------VHVLSGHR-------GEVSSTQ 270
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
Y ++ + +++ + WD R+ S K+ + ++ D+
Sbjct: 271 FNYAG---TLVVSGSIDCTSRLWDVRS-----------GRCLSVKQGHTDEVLDVAFDAA 316
Query: 286 GVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAY 345
G + ++ D LY+ L G QH + E K P + +++ SSD
Sbjct: 317 GTKMVSASADGSARLYHTL---TGVCQH-TLVGHEGEISKVAFNPQGTRLITASSDKTCR 372
Query: 346 VWQVNKPQADPIKLKSHDGEV--TAVNWCPNEAGKIVTSSDDYTVRLW 391
+W + + + L+ H E+ A N+ E I+T S D T R+W
Sbjct: 373 LWDCDTGECLQV-LEGHTDEIFSCAFNY---EGDFIITGSKDNTCRIW 416
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 105 VAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
V H+ I + + + T ++TAS D+T ++WD + +C L GHT I S C+ D
Sbjct: 344 VGHEGEISKVAFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFS-CAFNYEGD 402
Query: 165 ILVSGSRDGSFAIW 178
+++GS+D + IW
Sbjct: 403 FIITGSKDNTCRIW 416
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 119/331 (35%), Gaps = 79/331 (23%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + + + K +T S D+T K+W+ + L GH + ++ + D
Sbjct: 92 AHILPLTNCAFNKSGDRFITGSYDRTCKVWNTFTGEEVFTLEGHKNVVYAIAFNNPYGDK 151
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+V+GS D + +WD + K I
Sbjct: 152 IVTGSFDKTCKLWDAY---------------------------TGQLYYTLKGHQTEIVC 184
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
+ + IAT S N+ K WD + + T A AE I SL ++
Sbjct: 185 LSFNPQSTIIATGSMDNT-AKLWDVETGQERATLAGHRAE-----------IVSLGFNTG 232
Query: 286 GVFLTASCMDHRIYLYN--------VLQLDKGPIQ----HFSG---------CRIESFYV 324
G + DH L++ VL +G + +++G C + V
Sbjct: 233 GDLIVTGSFDHDSRLWDVRTGQCVHVLSGHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDV 292
Query: 325 KSEICPN-----------------ASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVT 367
+S C + + ++S S+DG+A ++ L H+GE++
Sbjct: 293 RSGRCLSVKQGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQH-TLVGHEGEIS 351
Query: 368 AVNWCPNEAGKIVTSSDDYTVRLWSLENSRC 398
V + P + +++T+S D T RLW + C
Sbjct: 352 KVAFNP-QGTRLITASSDKTCRLWDCDTGEC 381
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTS-SDDYTVRLWSL 393
I++GS D ++ +W V Q + L H GEV++ + N AG +V S S D T RLW +
Sbjct: 236 IVTGSFDHDSRLWDVRTGQCVHV-LSGHRGEVSSTQF--NYAGTLVVSGSIDCTSRLWDV 292
Query: 394 ENSRCSSMR 402
+ RC S++
Sbjct: 293 RSGRCLSVK 301
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 394 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---WSSQMRDNIIISGSTDRTLKVWN--- 447
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLK-DEVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 448 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 504
Query: 242 NSIVKFWDTRNLKAQ----ITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHR 297
+ +D R + + + + W + + H S +G+ + + +D
Sbjct: 505 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 562
Query: 298 IYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA-- 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 563 IRVWDV---ETGNCIHTLTGH--QSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQ 615
Query: 355 ---DPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLE 394
P K H VT + + N ++TSSDD TV+LW L+
Sbjct: 616 TLQGPNK---HQSAVTCLQFNKN---FVITSSDDGTVKLWDLK 652
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 17/167 (10%)
Query: 115 CWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGS 174
C + +++ S D T+++WD E +C LMGH +++ + + +VSG+ D
Sbjct: 466 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV---QYDGRRVVSGAYDFM 522
Query: 175 FAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR------------KAASMS 222
+WD ++ + + S G H++S S S R S
Sbjct: 523 VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 582
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
+TS + LKD +I + +S VK WD + + T P+ S+
Sbjct: 583 LTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAV 627
Score = 40.8 bits (94), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 119 EDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+D +++ + D T+KIWD + +C L G ++ N + +++ S DG+ +W
Sbjct: 590 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
Query: 179 DLR 181
DL+
Sbjct: 650 DLK 652
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 356 PIKLKSHDGEV-TAVNWCPNEAGKIVTSSDDYTVRLWSLENSRC 398
P LK HD V T + +C N +IV+ SDD T+++WS +C
Sbjct: 373 PKVLKGHDDHVITCLQFCGN---RIVSGSDDNTLKVWSAVTGKC 413
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 144/343 (41%), Gaps = 54/343 (15%)
Query: 93 RENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGS 152
R N + RI+ + ++ C +D I++ D TIKIWD + C+ L GHTGS
Sbjct: 207 RGNYKMTRINCQSENSKGVY--CLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGS 264
Query: 153 IKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHL-LSQSK 211
+ LC N +++SGS D + +WD+ C ++ + V HL +
Sbjct: 265 V--LCLQYDNR-VIISGSSDATVRVWDVE-----TGECIKTLIHHCEAV--LHLRFANGI 314
Query: 212 RVSRRKAASMSITSVLYLKD----EVSIATASAVNSIVKFWDTRNLKA---QITQAWPHA 264
V+ K S+++ ++ +D V + +AVN +V F D + A + + W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVN-VVDFDDRYIVSASGDRTIKVWSMD 373
Query: 265 ESSSAKETRLH--GISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESF 322
+ H GI+ L G + + D+ I L+++ SG +
Sbjct: 374 TLEFVRTLAGHRRGIACLQY--RGRLVVSGSSDNTIRLWDI----------HSGVCLRVL 421
Query: 323 YVKSEICP----NASHILSGSSDGNAYVWQVNKPQADPIKLKS---------HDGEVTAV 369
E+ + I+SG+ DG VW + + DP L S H G V +
Sbjct: 422 EGHEELVRCIRFDEKRIVSGAYDGKIKVWDL-QAALDPRALSSEICLCSLVQHTGRVFRL 480
Query: 370 NWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSSVRRRVM 412
+ + +IV+SS D T+ +W ++ S + PSS R +
Sbjct: 481 QF---DDFQIVSSSHDDTILIWDFLDAPPSGL--PSSTNRATL 518
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 126/285 (44%), Gaps = 35/285 (12%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I++ S D T+K+W A KC L+GHTG + S +I++SGS D + +W+
Sbjct: 316 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKVWN--- 369
Query: 183 KSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLK-DEVSIATASAV 241
+ C + ++ V+ HL + + VS + A++ + + + V + +AV
Sbjct: 370 --AETGECIHTLYGHTSTVRCMHL-HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAV 426
Query: 242 NSIVKFWDTRNLKAQ----ITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHR 297
+ +D R + + + + W + + H S +G+ + + +D
Sbjct: 427 RCVQ--YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTS 484
Query: 298 IYLYNVLQLDKGPIQH-FSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA-- 354
I +++V + G H +G +S E+ N ++SG++D +W + Q
Sbjct: 485 IRVWDV---ETGNCIHTLTG--HQSLTSGMELKDNI--LVSGNADSTVKIWDIKTGQCLQ 537
Query: 355 ---DPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENS 396
P K H VT + + N ++TSSDD TV+LW L+
Sbjct: 538 TLQGPSK---HQSAVTCLQFNKNF---VITSSDDGTVKLWDLKTG 576
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 17/167 (10%)
Query: 115 CWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGS 174
C + +++ S D T+++WD E +C LMGH +++ + + +VSG+ D
Sbjct: 388 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV---QYDGRRVVSGAYDFM 444
Query: 175 FAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR------------KAASMS 222
+WD ++ + + S G H++S S S R S
Sbjct: 445 VKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS 504
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSA 269
+TS + LKD +I + +S VK WD + + T P S+
Sbjct: 505 LTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAV 549
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 119 EDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIW 178
+D +++ + D T+KIWD + +C L G + ++ N + +++ S DG+ +W
Sbjct: 512 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Query: 179 DLR 181
DL+
Sbjct: 572 DLK 574
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 356 PIKLKSHDGEV-TAVNWCPNEAGKIVTSSDDYTVRLWSLENSRC 398
P LK HD V T + +C N +IV+ SDD T+++WS +C
Sbjct: 295 PKVLKGHDDHVITCLQFCGN---RIVSGSDDNTLKVWSAVTGKC 335
>sp|Q2TZG4|PFS2_ASPOR Polyadenylation factor subunit 2 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pfs2 PE=3 SV=1
Length = 610
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH +A+ DL W DT L+AS D T+KI+D + L GH +KS HPT +
Sbjct: 184 AHHDAVRDLAWSPSDTKFLSASDDTTLKIFDFTSRTADTVLTGHNWDVKSCDWHPTKG-L 242
Query: 166 LVSGSRDGSFAIWDLRC 182
LVSGS+D WD R
Sbjct: 243 LVSGSKDHQVKFWDPRT 259
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 6/146 (4%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
+H+N + + + + N+L T+S DQT +++D + L GH + SL HP +S
Sbjct: 268 SHKNTVTATRFSRVNQNLLATSSRDQTARVFDLRMMRDICILRGHEKPVSSLTWHPIHSS 327
Query: 165 ILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSS--AVVKGAHLLSQSKRVSRRKAASMS 222
++ +GS DGS + L + P + S A ++ + RV + A S +
Sbjct: 328 LISTGSEDGSLYHYLLDEPNVPSGQIPTIAPYDSPDPANTPAQVIYPAHRV--QYAHSAT 385
Query: 223 ITSVLYLKDEVSIATASAVNSIVKFW 248
I S+ + +A+ S N +FW
Sbjct: 386 IWSLDWHPLGHILASGSKDN-FTRFW 410
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ + LS S D ++ AD + L H+ +V + +W P + G +V+ S D+ V+
Sbjct: 196 PSDTKFLSASDDTTLKIFDFTSRTADTV-LTGHNWDVKSCDWHPTK-GLLVSGSKDHQVK 253
Query: 390 LWSLENSRC 398
W +RC
Sbjct: 254 FWDPRTARC 262
>sp|Q4X1Y0|PFS2_ASPFU Polyadenylation factor subunit 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pfs2
PE=3 SV=1
Length = 510
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH +A+ DL W DT L+AS D T+KI+D + L GH +KS HPT +
Sbjct: 91 AHHDAVRDLAWSPSDTKFLSASDDTTLKIFDFTARTADTVLTGHNWDVKSCDWHPTKG-L 149
Query: 166 LVSGSRDGSFAIWDLRC 182
LVSGS+D WD R
Sbjct: 150 LVSGSKDHQVKFWDPRT 166
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
+H+N + + + ++N+L T+S DQT +++D + L GH I SL HP +S
Sbjct: 175 SHKNTVTTTRFSRVNSNLLATSSRDQTARVFDLRMMRDICILRGHEKPISSLTWHPIHSS 234
Query: 165 ILVSGSRDGSF 175
++ +GS DGS
Sbjct: 235 LISTGSEDGSL 245
Score = 36.2 bits (82), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ + LS S D ++ AD + L H+ +V + +W P + G +V+ S D+ V+
Sbjct: 103 PSDTKFLSASDDTTLKIFDFTARTADTV-LTGHNWDVKSCDWHPTK-GLLVSGSKDHQVK 160
Query: 390 LWSLENSRC 398
W +RC
Sbjct: 161 FWDPRTARC 169
>sp|Q6LA54|YF48_SCHPO Uncharacterized WD repeat-containing protein C3H5.08c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3H5.08c PE=1 SV=2
Length = 933
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 122/299 (40%), Gaps = 45/299 (15%)
Query: 98 KARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC 157
+A I ++ H I DL W + + +L++S D+T ++W +K C H+ + S+
Sbjct: 377 EAPIREYAGHTADILDLSWSRNNF-LLSSSMDKTARLWHPVRKDCL-CCFEHSDFVTSIA 434
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK 217
HP + +SGS D +W ++ K+ VS
Sbjct: 435 FHPKDDRFFLSGSLDCKLRLWSIKEKA----------------------------VSFWN 466
Query: 218 AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGI 277
IT+V + D +A A + F+DTR L+ + + + +AK +++ GI
Sbjct: 467 ELPELITAVAFSPDG-GLAIAGTFVGLCLFYDTRGLRFRTQMSIRSSRGKNAKGSKVTGI 525
Query: 278 SSLSQDSNGVF----LTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNAS 333
+ +Q + + + + D RI +YN+ DK F G ++ + +
Sbjct: 526 QTRTQMIDNIAGDTEMLVTTNDSRIRIYNLR--DKSLELKFKGHANAQSQNRAYFDDDGN 583
Query: 334 HILSGSSDGNAYVWQVNKPQADPIKLKSHDGE-------VTAVNWCPNEAGKIVTSSDD 385
+++ GS D ++W + PQ K +TA + P + +++T S D
Sbjct: 584 YVICGSEDHQVFIWDL-PPQHMHKTKKKKHEHFKASVRPITAAVFAPTKTKQLLTLSGD 641
>sp|Q8C0J2|A16L1_MOUSE Autophagy-related protein 16-1 OS=Mus musculus GN=Atg16l1 PE=1 SV=1
Length = 607
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 62/270 (22%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+L AS D +IW + + L GH+G + S N+ I VSGS D + +WDLR
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Query: 183 KSSPKSNCAES----FVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATA 238
K K+ A S V + V H
Sbjct: 440 KVCIKTVFAGSSCNDIVCTEQCVMSGHF-------------------------------- 467
Query: 239 SAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDHR 297
+ ++FWD R+ S +E L G I++L + L + D
Sbjct: 468 ---DKKIRFWDIRS-------------ESVVREMELLGKITALDLNPERTELLSCSRDD- 510
Query: 298 IYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
L V+ L + Q FS G + S + + P+ S++ +GS++G+ YVW V +
Sbjct: 511 --LLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKV 568
Query: 355 DPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+ + K H + AV W P +G V S D
Sbjct: 569 EKVLSKQHSSSINAVAWAP--SGLHVVSVD 596
>sp|P40968|PRP17_YEAST Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC40 PE=1 SV=2
Length = 455
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 142/351 (40%), Gaps = 51/351 (14%)
Query: 65 SHIFAVSDED----GYVSL-----FDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLC 115
SH + S++D GY+ D R + SF C+ K I ++ H L
Sbjct: 113 SHFYGKSEKDYQGRGYLYPPNDVDVDLREERISFRCY---LPKKVIRNYPGHPEGTTALK 169
Query: 116 WI-KEDTNILTASGDQTIKIWD-AEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDG 173
++ K IL+ D TIKIWD +C GH IK+L + +S S D
Sbjct: 170 FLPKTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKAL-RFTEDCQSFLSSSFDR 228
Query: 174 SFAIWD---------LRCKSSP-----KSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAA 219
S IWD L S+P + F+ + + +L RVS +
Sbjct: 229 SVKIWDTETGKVKTRLHLNSTPADVESRPTNPHEFIVG---LSNSKILHYDDRVSENQGL 285
Query: 220 SMS----ITSVLYLK--DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETR 273
+ ++S+L LK + S +S+ + V+ W+ + + I Q +T
Sbjct: 286 VQTYDHHLSSILALKYFPDGSKFISSSEDKTVRIWENQ-INVPIKQ---------ISDTA 335
Query: 274 LHGISSLSQDSNGVFLTASCMDHRIYLYNVL-QLDKGPIQHFSGCRIESFYVKSEICPNA 332
H + L+ + + A MD+RIY +++ + + P + F G + + +
Sbjct: 336 QHSMPFLNVHPSQNYFCAQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDG 395
Query: 333 SHILSGSSDGNAYVWQVNKPQ-ADPIKLKSHDGEVTAVNWCPNEAGKIVTS 382
+I SG S + W N + + IK+ + +T V+W P E K++ S
Sbjct: 396 RYICSGDSKSRLFTWDWNTSRLLNNIKIPG-NKPITQVDWHPQETSKVICS 445
>sp|Q676U5|A16L1_HUMAN Autophagy-related protein 16-1 OS=Homo sapiens GN=ATG16L1 PE=1 SV=2
Length = 607
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 105/270 (38%), Gaps = 62/270 (22%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
+L AS D +IW + + L GH+G + S N+ I VSGS D + +WDLR
Sbjct: 381 LLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARI-VSGSHDRTLKLWDLRS 439
Query: 183 KSSPKSNCAES----FVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATA 238
K K+ A S V + V H
Sbjct: 440 KVCIKTVFAGSSCNDIVCTEQCVMSGHF-------------------------------- 467
Query: 239 SAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHG-ISSLSQDSNGVFLTASCMDHR 297
+ ++FWD R+ S +E L G I++L + L + D
Sbjct: 468 ---DKKIRFWDIRS-------------ESIVREMELLGKITALDLNPERTELLSCSRDD- 510
Query: 298 IYLYNVLQLDKGPI-QHFS--GCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQA 354
L V+ L I Q FS G + S + + P+ S++ +GS++G+ Y+W V +
Sbjct: 511 --LLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKV 568
Query: 355 DPIKLKSHDGEVTAVNWCPNEAGKIVTSSD 384
+ + K H + AV W P +G V S D
Sbjct: 569 EKVLSKQHSSSINAVAWSP--SGSHVVSVD 596
>sp|Q5FWQ6|WDR69_XENLA Outer row dynein assembly protein 16 homolog OS=Xenopus laevis
GN=wdr69 PE=2 SV=1
Length = 415
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 120/296 (40%), Gaps = 58/296 (19%)
Query: 123 ILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRC 182
I T S D+T K+W AE KC GHT I L +P S ++ +GS D + +WD++
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLVFNP-QSTLIATGSMDTTAKLWDIQS 208
Query: 183 --KSSPKSNCAESFVFSSAVVKGAHLLSQS-------------KRVSRRKAASMSITSVL 227
++ S A + S G L++ S +R+ I+S
Sbjct: 209 GEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHRGEISSAQ 268
Query: 228 YLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGV 287
+ D IATAS S K WD+ N K T E + ++ DS G
Sbjct: 269 FNWDCSLIATASMDKS-CKLWDSLNGKCVATLTGHDDE-----------VLDVTFDSTGQ 316
Query: 288 FLTASCMDHRIYLYNV--------LQLDKGPIQHFSGCRIESFYVKSEICPNA--SHILS 337
+ + D +Y+ L+ +G I S+IC NA + I++
Sbjct: 317 LVATASADGTARVYSASSRKCLAKLEGHEGEI--------------SKICFNAQGNRIVT 362
Query: 338 GSSDGNAYVWQVNKPQADPIKLKSHDGEV--TAVNWCPNEAGKIVTSSDDYTVRLW 391
SSD + +W + + + LK H E+ A N+ E I+T S D T R+W
Sbjct: 363 ASSDKTSRLWDPHTGECLQV-LKGHTDEIFSCAFNY---EGNTIITGSKDNTCRIW 414
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I +C+ + I+TAS D+T ++WD +C L GHT I S C+ +
Sbjct: 343 GHEGEISKICFNAQGNRIVTASSDKTSRLWDPHTGECLQVLKGHTDEIFS-CAFNYEGNT 401
Query: 166 LVSGSRDGSFAIW 178
+++GS+D + IW
Sbjct: 402 IITGSKDNTCRIW 414
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 126/305 (41%), Gaps = 27/305 (8%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
AH + ++ + K ++ +T S D+T K+WD + L GH + ++ + D
Sbjct: 90 AHILPLTNVAFNKSGSSFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIQFNNPYGDK 149
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS D + +W S+ C +F +A + QS ++ SM T+
Sbjct: 150 IATGSFDKTCKLW-----SAETGKCYHTFRGHTAEIVCLVFNPQSTLIA---TGSMDTTA 201
Query: 226 VLY--LKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAES-----SSAKETRLHG-- 276
L+ E ++ + I+ IT ++ H S S + L G
Sbjct: 202 KLWDIQSGEEALTLSGHAAEIISLSFNTTGDRLITGSFDHTVSVWEIPSGRRIHTLIGHR 261
Query: 277 --ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASH 334
ISS + + + + MD L++ L+ + +G E V +
Sbjct: 262 GEISSAQFNWDCSLIATASMDKSCKLWD--SLNGKCVATLTGHDDEVLDVTFD--STGQL 317
Query: 335 ILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAG-KIVTSSDDYTVRLWSL 393
+ + S+DG A V+ + + KL+ H+GE++ + C N G +IVT+S D T RLW
Sbjct: 318 VATASADGTARVYSASSRKC-LAKLEGHEGEISKI--CFNAQGNRIVTASSDKTSRLWDP 374
Query: 394 ENSRC 398
C
Sbjct: 375 HTGEC 379
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 101 ISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHP 160
++ H + + D+ + + TAS D T +++ A +KC L GH G I +C +
Sbjct: 296 VATLTGHDDEVLDVTFDSTGQLVATASADGTARVYSASSRKCLAKLEGHEGEISKICFNA 355
Query: 161 TNSDILVSGSRDGSFAIWD 179
+ I V+ S D + +WD
Sbjct: 356 QGNRI-VTASSDKTSRLWD 373
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 100 RISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSH 159
RI + H+ I + + + I TAS D++ K+WD+ KC L GH + + +
Sbjct: 253 RIHTLIGHRGEISSAQFNWDCSLIATASMDKSCKLWDSLNGKCVATLTGHDDEVLDV-TF 311
Query: 160 PTNSDILVSGSRDGSFAIW 178
+ ++ + S DG+ ++
Sbjct: 312 DSTGQLVATASADGTARVY 330
>sp|Q99LL5|PWP1_MOUSE Periodic tryptophan protein 1 homolog OS=Mus musculus GN=Pwp1 PE=1
SV=1
Length = 501
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
H +A+ DL W K N+L +AS D T+ +WD K L HT +++L HP +
Sbjct: 253 GHTDAVLDLSWNKTVRNVLASASADSTVVLWDLSVGKSVARLTAHTDKVQTLQFHPFEAQ 312
Query: 165 ILVSGSRDGSFAIWDLR 181
L+SGS D S A++D R
Sbjct: 313 TLISGSYDKSVALYDCR 329
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 81/443 (18%), Positives = 151/443 (34%), Gaps = 145/443 (32%)
Query: 31 DVVTDFTEIGAVTVEHHGEETPPLAVSFCKTSKNSHIFAVSDEDGYVSLFDSRRK----- 85
D D E+ ++++ EE P A + ++ ++ +D+D YV+L D+ +
Sbjct: 83 DRTLDDDELAGYDLDNYDEEDNPDAETIGESLLGLTVYGSNDQDPYVTLKDTEQYEHEDF 142
Query: 86 --LPS---FACHRENAEKARI----------SDWVAHQNAI----FDLCWIKED------ 120
P+ C R E+ + S +V H + + W+ D
Sbjct: 143 LIKPTDNLIVCGRAEQEQCNLEVHVYNQEEESFYVHHDILLSAYPLSVEWLNFDPSPDAS 202
Query: 121 TNILTASGDQT--IKIWDAEKKKCTGALM---------------------GHTGSIKSLC 157
T A G+ T I++WD + + GHT ++ L
Sbjct: 203 TGNYIAVGNMTPVIEVWDLDIVDSLEPVFTLGSKLSKKKKKKGKKSSSAEGHTDAVLDLS 262
Query: 158 SHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRK 217
+ T ++L S S D + +WDL S K V+R
Sbjct: 263 WNKTVRNVLASASADSTVVLWDL---------------------------SVGKSVARLT 295
Query: 218 AASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGI 277
A + + ++ + E + + + V +D R+ S + ++ R G
Sbjct: 296 AHTDKVQTLQFHPFEAQTLISGSYDKSVALYDCRD------------PSQNHRQWRFSG- 342
Query: 278 SSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILS 337
Q+++ HFS C H L+
Sbjct: 343 ---------------------------QIERVTWNHFSPC----------------HFLA 359
Query: 338 GSSDGNAYVWQVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENS 396
+ DG +V+ ++ PI L +H+ E++ ++ G +VT+S D V++W +
Sbjct: 360 STDDG--FVYNLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDILGD 417
Query: 397 RCSSMRSPSSVRRRVMAIPSTEC 419
R PS + R M + C
Sbjct: 418 R------PSLIHSRDMKMGVLFC 434
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TUP1 PE=1
SV=2
Length = 713
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 37/271 (13%)
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS 170
I +C+ + + T + D+ I+IWD E +K L GH I SL P+ D LVSGS
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS-GDKLVSGS 504
Query: 171 RDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKG------AHLLSQSKRVSRRKAASM--- 221
D + IWDLR + E V + AV G A L ++ RV + +
Sbjct: 505 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 564
Query: 222 -------------SITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSS 268
S+ SV++ +D S+ + S ++ VK W+ +N + P+ S
Sbjct: 565 LDSENESGTGHKDSVYSVVFTRDGQSVVSGS-LDRSVKLWNLQNANNKSDSKTPN---SG 620
Query: 269 AKETRLHG----ISSLSQDSNGVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYV 324
E G + S++ N ++ + D + ++ + P+ G R V
Sbjct: 621 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD--KKSGNPLLMLQGHRNSVISV 678
Query: 325 K----SEICPNASHILSGSSDGNAYVWQVNK 351
S + P + +GS D A +W+ K
Sbjct: 679 AVANGSPLGPEYNVFATGSGDCKARIWKYKK 709
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 322 FYVKSEIC--PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKI 379
Y++S +C P+ + +G+ D +W + + I L+ H+ ++ ++++ P+ K+
Sbjct: 444 LYIRS-VCFSPDGKFLATGAEDRLIRIWDIENRKIVMI-LQGHEQDIYSLDYFPS-GDKL 500
Query: 380 VTSSDDYTVRLWSLENSRCS 399
V+ S D TVR+W L +CS
Sbjct: 501 VSGSGDRTVRIWDLRTGQCS 520
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC---SHP 160
++ H++ + + + D IL+ S D+ + WD + L GH S+ S+ P
Sbjct: 626 YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSP 685
Query: 161 TNSD--ILVSGSRDGSFAIW 178
+ + +GS D IW
Sbjct: 686 LGPEYNVFATGSGDCKARIW 705
>sp|O15736|TIPD_DICDI Protein tipD OS=Dictyostelium discoideum GN=tipD PE=3 SV=1
Length = 612
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 131/333 (39%), Gaps = 46/333 (13%)
Query: 79 LFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAE 138
+F S LPS A R W H + I+ + + + T GD+ +K+WD
Sbjct: 305 VFSSEAMLPSKAKKR----------WTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVI 354
Query: 139 KKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAE------ 192
+ L+G + SI S+ P + IL S D S +W+ S +
Sbjct: 355 SGQQKSTLLGASQSIVSVSFSPNDESIL-GTSNDNSARLWNTELGRSRHTLTGHIGKVYT 413
Query: 193 -SFVFSSAVVKGAHLLS------QSKRVSRRKAASMSITSVLYLKDEVSIATASAVNSIV 245
F+ S+ VV G+H + Q +R S ++ L + + V+ V
Sbjct: 414 GKFINSNRVVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSV 473
Query: 246 KFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYLYNVLQ 305
+FWD+ P SS E ++ I++ ++N + + DH + + ++
Sbjct: 474 RFWDS-------NAGEPTQVLSSIHEGQITSITNSPTNTNQIL--TNSRDHTLKIIDIRT 524
Query: 306 LD-----KGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLK 360
D K P ++ +G + K+ P+ +I SGS DG+ +W + + K
Sbjct: 525 FDTIRTFKDP-EYRNGLN----WTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTK 579
Query: 361 SHDG--EVTAVNWCPNEAGKIVTSSDDYTVRLW 391
H+ V +W P A +++ D + W
Sbjct: 580 VHNNGSSVCCCSWSP-LANIFISADKDKNIIQW 611
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
PN IL S+D +A +W ++ L H G+V + + ++VT S D T++
Sbjct: 376 PNDESILGTSNDNSARLWNTELGRSRHT-LTGHIGKVYTGKFI--NSNRVVTGSHDRTIK 432
Query: 390 LWSLENSRCS 399
LW L+ C+
Sbjct: 433 LWDLQKGYCT 442
>sp|O43071|PRP17_SCHPO Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp17 PE=1 SV=1
Length = 558
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 122/301 (40%), Gaps = 48/301 (15%)
Query: 97 EKARISDWVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGH--TGSIK 154
+++ + + H I DL + ++ + L+ S D+TIK+WD E KC T +K
Sbjct: 299 DRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVK 358
Query: 155 SLCSHPTNSDILVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVS 214
P + ++G+ D +D+R SP V H L
Sbjct: 359 -FQVDPDKPNEFLAGTADKRILQFDIR---SP-----------DIVQAYDHHLG------ 397
Query: 215 RRKAASMSITSVLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRL 274
I S+ +L++ T S +S ++FW+ + +
Sbjct: 398 -------GINSITFLENGKRFVTTSD-DSSMRFWEYGT----------PVPIKFVADIAM 439
Query: 275 HGISSLSQDSNGVFLTASCMDHRIYLYNVLQ-LDKGPIQHFSGCRIESFYVKSEICPNAS 333
H + ++ NG + +D+ IY+Y+ + + + F G + ++ P+
Sbjct: 440 HSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGR 499
Query: 334 HILSGSSDGNA--YVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSD-DYTVRL 390
+ SG S GNA + W+ K A KL +H G V ++ + P E K+ TSS D +++
Sbjct: 500 FVFSGDSSGNACFWDWKTCKLMA---KLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKY 556
Query: 391 W 391
W
Sbjct: 557 W 557
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 17/113 (15%)
Query: 75 GYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL-----CWIKEDT--NILTAS 127
G L + P HR E + H++ +FD + D N+
Sbjct: 194 GQNELLKEQLATPEVETHRSKEET------ILHKDRLFDYQNRSYMHVPNDVGINLSEEP 247
Query: 128 GDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL 180
G+QT I KK GHT I L P + +L+SGS D IW++
Sbjct: 248 GEQTCYI----PKKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEV 296
>sp|Q13610|PWP1_HUMAN Periodic tryptophan protein 1 homolog OS=Homo sapiens GN=PWP1 PE=1
SV=1
Length = 501
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
H +A+ DL W K N+L +AS D T+ +WD K +L HT +++L HP +
Sbjct: 254 GHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQ 313
Query: 165 ILVSGSRDGSFAIWDLR 181
L+SGS D S A++D R
Sbjct: 314 TLISGSYDKSVALYDCR 330
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 235 IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCM 294
+A+ASA N+++ WD K + A + + + H + + S + +
Sbjct: 272 LASASADNTVI-LWDMSLGKPAASLA---VHTDKVQTLQFHPFEAQTLISGSYDKSVALY 327
Query: 295 D-------HRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
D HR++ ++ Q+++ HFS C H L+ + DG +V+
Sbjct: 328 DCRSPDESHRMWRFSG-QIERVTWNHFSPC----------------HFLASTDDG--FVY 368
Query: 348 QVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSS 406
++ PI L +H+ E++ ++ G +VT+S D V++W + R PS
Sbjct: 369 NLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDR------PSL 422
Query: 407 VRRRVMAIPSTEC 419
V R M + C
Sbjct: 423 VHSRDMKMGVLFC 435
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 50/305 (16%)
Query: 111 IFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGS 170
I +C+ + + T + D+ I+IWD E KK L GH I SL P+ + LVSGS
Sbjct: 409 IRSVCFSPDGKFLATGAEDKLIRIWDLETKKIVMTLKGHEQDIYSLDYFPSGNK-LVSGS 467
Query: 171 RDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLK 230
D + IWDL + + E V + AV G
Sbjct: 468 GDRTVRIWDLTTGTCSLTLSIEDGVTTVAVSPG--------------------------- 500
Query: 231 DEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLT 290
E A +++ V+ WD+ + + + E + ++ + ++D GV
Sbjct: 501 -EGKFIAAGSLDRTVRVWDS-DTGFLVERLDSENELGTGHRDSVYSV-VFTRDGKGVV-- 555
Query: 291 ASCMDHRIYLYNVLQLDKGPIQHFSGCRI-----ESFYVKSEICPNASHILSGSSDGNAY 345
+ +D + L+N+ L G H + C + + F + N +ILSGS D
Sbjct: 556 SGSLDRSVKLWNLNGL-SGQKSH-AECEVTYTGHKDFVLSVATTQNDEYILSGSKDRGVL 613
Query: 346 VWQVNKPQADP-IKLKSHDG---EVTAVNWCP--NEAGKIVTSSDDYTVRLW--SLENSR 397
W + +P + L+ H VT N P E G T S D R+W S +NS+
Sbjct: 614 FW--DTKSGNPLLMLQGHRNSVISVTVANGHPLGPEYGVFATGSGDCKARIWKYSKKNSQ 671
Query: 398 CSSMR 402
+S +
Sbjct: 672 QNSTQ 676
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 97/250 (38%), Gaps = 32/250 (12%)
Query: 106 AHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDI 165
H+ I+ L + +++ SGD+T++IWD C+ L G + ++ P
Sbjct: 446 GHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDLTTGTCSLTLSIEDG-VTTVAVSPGEGKF 504
Query: 166 LVSGSRDGSFAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITS 225
+ +GS D + +WD F+ L S+++ + + S+ S
Sbjct: 505 IAAGSLDRTVRVWD----------SDTGFLVE-------RLDSENELGTGHRD---SVYS 544
Query: 226 VLYLKDEVSIATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSN 285
V++ +D + + S ++ VK W+ L Q + HAE + S++ N
Sbjct: 545 VVFTRDGKGVVSGS-LDRSVKLWNLNGLSGQKS----HAECEVTYTGHKDFVLSVATTQN 599
Query: 286 GVFLTASCMDHRIYLYNVLQLDKGPIQHFSGCRIESFYVK----SEICPNASHILSGSSD 341
++ + D + ++ P+ G R V + P +GS D
Sbjct: 600 DEYILSGSKDRGVLFWDTKS--GNPLLMLQGHRNSVISVTVANGHPLGPEYGVFATGSGD 657
Query: 342 GNAYVWQVNK 351
A +W+ +K
Sbjct: 658 CKARIWKYSK 667
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 322 FYVKSEIC--PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKI 379
Y++S +C P+ + +G+ D +W + + + LK H+ ++ ++++ P+ K+
Sbjct: 407 LYIRS-VCFSPDGKFLATGAEDKLIRIWDLETKKI-VMTLKGHEQDIYSLDYFPS-GNKL 463
Query: 380 VTSSDDYTVRLWSLENSRCS 399
V+ S D TVR+W L CS
Sbjct: 464 VSGSGDRTVRIWDLTTGTCS 483
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 104 WVAHQNAIFDLCWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLC---SHP 160
+ H++ + + + D IL+ S D+ + WD + L GH S+ S+ HP
Sbjct: 584 YTGHKDFVLSVATTQNDEYILSGSKDRGVLFWDTKSGNPLLMLQGHRNSVISVTVANGHP 643
Query: 161 TNSD--ILVSGSRDGSFAIWDLRCKSSPKS 188
+ + +GS D IW K+S ++
Sbjct: 644 LGPEYGVFATGSGDCKARIWKYSKKNSQQN 673
>sp|Q8W1K8|MUT11_CHLRE Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1
Length = 370
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 43/198 (21%)
Query: 55 AVSFCKTSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDL 114
AV+ K S + + A D V+L+D+ A AR++ H + D+
Sbjct: 42 AVAAVKFSPDGSLLASGSADRTVALWDA-------------ATGARVNTLAGHSCGVSDV 88
Query: 115 CWIKEDTNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGS 174
W + TA+ D ++K+WDAE C L GHT + +L SGS D +
Sbjct: 89 AWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDET 148
Query: 175 FAIWDLRCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRR-KAASMSITSVLYLKDEV 233
+WD+R S R R A S +TS + D
Sbjct: 149 LRLWDVR----------------------------SGRCLREVPAHSDPVTSAAFSYDG- 179
Query: 234 SIATASAVNSIVKFWDTR 251
S+ S+++ +++ WDT+
Sbjct: 180 SMVVTSSLDGLIRLWDTQ 197
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 330 PNASHILSGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
P+ S + SGS+D +W A L H V+ V W PN + T++DD++++
Sbjct: 50 PDGSLLASGSADRTVALWDA-ATGARVNTLAGHSCGVSDVAWNPN-GRYLATAADDHSLK 107
Query: 390 LWSLENSRC 398
LW E C
Sbjct: 108 LWDAETGAC 116
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 276 GISSLSQDSNGVFLTASCMDHRIYLYNV-----LQLDKGPIQHFSGCRIESFYVKSEICP 330
G+S ++ + NG +L + DH + L++ L+ G + C +
Sbjct: 84 GVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDG--------- 134
Query: 331 NASHIL-SGSSDGNAYVWQVNKPQADPIKLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVR 389
A H+L SGS D +W V + ++ +H VT+ + + +VTSS D +R
Sbjct: 135 AAGHLLASGSFDETLRLWDVRSGRC-LREVPAHSDPVTSAAF-SYDGSMVVTSSLDGLIR 192
Query: 390 LWSLENSRC 398
LW + C
Sbjct: 193 LWDTQTGHC 201
Score = 33.1 bits (74), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 141 KCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
+CT AL GHT ++ ++ P S +L SGS D + A+WD
Sbjct: 31 RCTHALSGHTKAVAAVKFSPDGS-LLASGSADRTVALWD 68
Score = 32.7 bits (73), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
Query: 65 SHIFAVSDEDGYVSLFDSRRKLPSFACHRENAEKARISDWVAHQNAIFDLCWIKEDTNIL 124
H+ A D + L+D R S C RE AH + + + + + ++
Sbjct: 137 GHLLASGSFDETLRLWDVR----SGRCLREVP---------AHSDPVTSAAFSYDGSMVV 183
Query: 125 TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWD 179
T+S D I++WD + C L S + N+ ++ + DG +WD
Sbjct: 184 TSSLDGLIRLWDTQTGHCLKTLFDRDSPPVSFAAFTPNAKYVLCNTLDGRAKLWD 238
>sp|Q2HJ56|PWP1_BOVIN Periodic tryptophan protein 1 homolog OS=Bos taurus GN=PWP1 PE=2
SV=1
Length = 500
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 106 AHQNAIFDLCWIKEDTNIL-TASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSD 164
H +A+ DL W K N+L +AS D T+ +WD K +L HT +++L HP +
Sbjct: 253 GHTDAVLDLSWNKLVRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQ 312
Query: 165 ILVSGSRDGSFAIWDLR 181
L+SGS D S A++D R
Sbjct: 313 TLISGSYDKSVALYDCR 329
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 37/193 (19%)
Query: 235 IATASAVNSIVKFWDTRNLKAQITQAWPHAESSSAKETRLHGISSLSQDSNGVFLTASCM 294
+A+ASA N+++ WD K + A + + + H + + S + +
Sbjct: 271 LASASADNTVI-LWDMSLGKPAASLA---VHTDKVQTLQFHPFEAQTLISGSYDKSVALY 326
Query: 295 D-------HRIYLYNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVW 347
D HR++ ++ Q+++ HFS C H L+ + DG +V+
Sbjct: 327 DCRSPEESHRMWRFSG-QIERVTWNHFSPC----------------HFLASTDDG--FVY 367
Query: 348 QVNKPQADPI-KLKSHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSS 406
++ PI L +H+ E++ ++ G +VT+S D V++W + R PS
Sbjct: 368 NLDARSDKPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDR------PSL 421
Query: 407 VRRRVMAIPSTEC 419
V R M + C
Sbjct: 422 VHSRDMKMGVLFC 434
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 183,750,425
Number of Sequences: 539616
Number of extensions: 7363771
Number of successful extensions: 30447
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 669
Number of HSP's that attempted gapping in prelim test: 19198
Number of HSP's gapped (non-prelim): 8727
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)