BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010392
(512 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=typA PE=3 SV=1
Length = 597
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/369 (55%), Positives = 274/369 (74%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN+AIIAHVDHGKTTLVDA+LKQ+ +FR+ + V +MDSNDLERERGITILSKNT++
Sbjct: 5 IRNVAIIAHVDHGKTTLVDALLKQSGIFREGEDVPVCVMDSNDLERERGITILSKNTAVR 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
Y DT INI+DTPGH+DFGGEVER+L MV+G +L+VD+ EGPMPQTRFVLKKALE G +
Sbjct: 65 YQDTLINIVDTPGHADFGGEVERVLGMVDGCVLIVDANEGPMPQTRFVLKKALEKGLRPL 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VVVNKIDRP A P+ ++ F+LF+EL A D+QCDF ++ASG+ G A S D+ ++D+
Sbjct: 125 VVVNKIDRPRADPNTAVDKVFDLFVELGADDDQCDFTTLFASGLGGFAKESLDDDSEDMK 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PLFE+I+ +P P + + LQ+ T L+Y ++ GRI IGR+H G ++ G + + +
Sbjct: 185 PLFEAILHHVPPPAGDPNKPLQLQVTTLDYSDYLGRIIIGRIHNGTVKAGQQAALVKEDG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
S ++S+L +E +R+ +AG I A+ G D IGET+ + LP IKV+E
Sbjct: 245 SIAKGKVSKLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQALPLIKVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PT++M+FS+N SPF G+EGK+VTSR +RDRL RELE N+A+RV DGE+A+ F+VSGRG L
Sbjct: 305 PTLQMTFSVNDSPFAGQEGKFVTSRQIRDRLNRELETNVALRVEDGESAEQFLVSGRGEL 364
Query: 449 HITILIENI 457
H+ ILIE +
Sbjct: 365 HLGILIETM 373
>sp|P0A3B4|TYPA_SHIFL GTP-binding protein TypA/BipA OS=Shigella flexneri GN=typA PE=3
SV=1
Length = 607
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 273/369 (73%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
+RNIAIIAHVDHGKTTLVD +L+Q+ F +ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+ND +INI+DTPGH+DFGGEVER+++MV+ VLLVVD+ +GPMPQTRFV KKA +G +
Sbjct: 65 WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NK+DRP ARPD+V++ F+LF+ L+ATDEQ DF +YAS + G AGL +++A+D+
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+++I+ +P P ++ DG QM + L+Y+ + G I IGR+ G ++ +V + SE
Sbjct: 185 PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R A++ ++ + R+ ++ AGDI A+ G+ ++ I +T+ D + + LP++ V+E
Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M F +NTSPF G+EGK+VTSR + DRL +EL N+A+RV + E AD F VSGRG L
Sbjct: 305 PTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGEL 364
Query: 449 HITILIENI 457
H+++LIEN+
Sbjct: 365 HLSVLIENM 373
>sp|P32132|TYPA_ECOLI GTP-binding protein TypA/BipA OS=Escherichia coli (strain K12)
GN=typA PE=1 SV=2
Length = 607
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 273/369 (73%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
+RNIAIIAHVDHGKTTLVD +L+Q+ F +ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+ND +INI+DTPGH+DFGGEVER+++MV+ VLLVVD+ +GPMPQTRFV KKA +G +
Sbjct: 65 WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NK+DRP ARPD+V++ F+LF+ L+ATDEQ DF +YAS + G AGL +++A+D+
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+++I+ +P P ++ DG QM + L+Y+ + G I IGR+ G ++ +V + SE
Sbjct: 185 PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R A++ ++ + R+ ++ AGDI A+ G+ ++ I +T+ D + + LP++ V+E
Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M F +NTSPF G+EGK+VTSR + DRL +EL N+A+RV + E AD F VSGRG L
Sbjct: 305 PTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGEL 364
Query: 449 HITILIENI 457
H+++LIEN+
Sbjct: 365 HLSVLIENM 373
>sp|P0A3B1|TYPA_ECOL6 GTP-binding protein TypA/BipA OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=typA PE=3 SV=1
Length = 607
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 273/369 (73%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
+RNIAIIAHVDHGKTTLVD +L+Q+ F +ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+ND +INI+DTPGH+DFGGEVER+++MV+ VLLVVD+ +GPMPQTRFV KKA +G +
Sbjct: 65 WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NK+DRP ARPD+V++ F+LF+ L+ATDEQ DF +YAS + G AGL +++A+D+
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+++I+ +P P ++ DG QM + L+Y+ + G I IGR+ G ++ +V + SE
Sbjct: 185 PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R A++ ++ + R+ ++ AGDI A+ G+ ++ I +T+ D + + LP++ V+E
Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M F +NTSPF G+EGK+VTSR + DRL +EL N+A+RV + E AD F VSGRG L
Sbjct: 305 PTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGEL 364
Query: 449 HITILIENI 457
H+++LIEN+
Sbjct: 365 HLSVLIENM 373
>sp|P0A3B3|TYPA_ECO57 GTP-binding protein TypA/BipA OS=Escherichia coli O157:H7 GN=typA
PE=3 SV=1
Length = 607
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 273/369 (73%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
+RNIAIIAHVDHGKTTLVD +L+Q+ F +ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+ND +INI+DTPGH+DFGGEVER+++MV+ VLLVVD+ +GPMPQTRFV KKA +G +
Sbjct: 65 WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NK+DRP ARPD+V++ F+LF+ L+ATDEQ DF +YAS + G AGL +++A+D+
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+++I+ +P P ++ DG QM + L+Y+ + G I IGR+ G ++ +V + SE
Sbjct: 185 PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R A++ ++ + R+ ++ AGDI A+ G+ ++ I +T+ D + + LP++ V+E
Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M F +NTSPF G+EGK+VTSR + DRL +EL N+A+RV + E AD F VSGRG L
Sbjct: 305 PTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGEL 364
Query: 449 HITILIENI 457
H+++LIEN+
Sbjct: 365 HLSVLIENM 373
>sp|P0A3B2|TYPA_ECO27 GTP-binding protein TypA/BipA OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=typA PE=3 SV=1
Length = 607
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 190/369 (51%), Positives = 273/369 (73%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
+RNIAIIAHVDHGKTTLVD +L+Q+ F +ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 5 LRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+ND +INI+DTPGH+DFGGEVER+++MV+ VLLVVD+ +GPMPQTRFV KKA +G +
Sbjct: 65 WNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NK+DRP ARPD+V++ F+LF+ L+ATDEQ DF +YAS + G AGL +++A+D+
Sbjct: 125 VVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMT 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+++I+ +P P ++ DG QM + L+Y+ + G I IGR+ G ++ +V + SE
Sbjct: 185 PLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R A++ ++ + R+ ++ AGDI A+ G+ ++ I +T+ D + + LP++ V+E
Sbjct: 245 KTRNAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M F +NTSPF G+EGK+VTSR + DRL +EL N+A+RV + E AD F VSGRG L
Sbjct: 305 PTVSMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADAFRVSGRGEL 364
Query: 449 HITILIENI 457
H+++LIEN+
Sbjct: 365 HLSVLIENM 373
>sp|O07631|TYPA_BACSU GTP-binding protein TypA/BipA homolog OS=Bacillus subtilis (strain
168) GN=typA PE=3 SV=1
Length = 612
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/372 (52%), Positives = 270/372 (72%)
Query: 86 RSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNT 145
R+D+RNIAIIAHVDHGKTTLVD +L QA FR N+ V ER MDSNDLERERGITIL+KNT
Sbjct: 4 RNDLRNIAIIAHVDHGKTTLVDQLLHQAGTFRANEQVAERAMDSNDLERERGITILAKNT 63
Query: 146 SITYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGH 205
+I Y DT+INI+DTPGH+DFGGEVERI+ MV+GV+LVVD+ EG MPQTRFVLKKALE
Sbjct: 64 AINYKDTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEGCMPQTRFVLKKALEQNL 123
Query: 206 AVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLAD 265
VVVVNKIDR ARP+ VI+ +LFIEL+A +EQ +F +YAS I G A L P +
Sbjct: 124 NPVVVVNKIDRDFARPEEVIDEVLDLFIELDANEEQLEFPVVYASAINGTASLDPKQQDE 183
Query: 266 DLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCT 325
++ L+E+I++ +P P + LQ L+Y+++ GRI IGR+ G ++ G +V +
Sbjct: 184 NMEALYETIIKHVPAPVDNAEEPLQFQVALLDYNDYVGRIGIGRVFRGTMKVGQQVSLMK 243
Query: 326 SEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIK 385
+ + + R++++F ++ RV E AGD+ AV G++DI +GET+ PLP ++
Sbjct: 244 LDGTAKSFRVTKIFGFQGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVDHQDPLPVLR 303
Query: 386 VEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGR 445
++EPT++M+F +N SPF GREGKYVT+R + +RL +L+ ++++RV + D ++VSGR
Sbjct: 304 IDEPTLQMTFVVNNSPFAGREGKYVTARKIEERLQSQLQTDVSLRVEPTASPDAWVVSGR 363
Query: 446 GTLHITILIENI 457
G LH++ILIEN+
Sbjct: 364 GELHLSILIENM 375
>sp|P44910|TYPA_HAEIN GTP-binding protein TypA/BipA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=typA PE=1
SV=1
Length = 616
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/370 (52%), Positives = 267/370 (72%), Gaps = 1/370 (0%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQ-TVKERIMDSNDLERERGITILSKNTSI 147
+RNIAIIAHVDHGKTTLVD +L+Q+ F + V ER+MDSNDLE+ERGITIL+KNT+I
Sbjct: 10 LRNIAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAI 69
Query: 148 TYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAV 207
+ND +INI+DTPGH+DFGGEVER+L+MV+ VLLVVD+ +GPMPQTRFV +KA G
Sbjct: 70 NWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKP 129
Query: 208 VVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDL 267
+VV+NK+DRP ARPD+V++ F+LF+ L A+DEQ DF IYAS + G AGL ++LA+D+
Sbjct: 130 IVVINKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDM 189
Query: 268 GPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSE 327
PLFE+I++ + P++E D QM + L+Y+ + G I IGR+ G ++ V + SE
Sbjct: 190 TPLFEAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINSE 249
Query: 328 DSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVE 387
R RI ++ + R ++ AGDI A+ G+ ++ I +TI D + + LPS+ V+
Sbjct: 250 GKTRQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINTVEALPSLTVD 309
Query: 388 EPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGT 447
EPTV M F +NTSPF G+EGKYVTSR + +RL +EL N+A+RV + D F VSGRG
Sbjct: 310 EPTVTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDEFRVSGRGE 369
Query: 448 LHITILIENI 457
LH+++LIEN+
Sbjct: 370 LHLSVLIENM 379
>sp|P57508|TYPA_BUCAI GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=typA PE=3 SV=1
Length = 607
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 182/369 (49%), Positives = 266/369 (72%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRNIAIIAHVDHGKTTL+D +L+Q+ F +++ ERIMDSNDLE+ERGITILSKNTSI
Sbjct: 5 IRNIAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIK 64
Query: 149 YNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVV 208
+N+ KINI+DTPGH+DFGGEVER+++MV+ VLLVVD+++GPMPQTRFV KKA ++G +
Sbjct: 65 WNNYKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPI 124
Query: 209 VVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDLG 268
VV+NKIDR +RPD+V++ F+LF+ LNA+DEQ DF IY S + G +G N+ +++
Sbjct: 125 VVINKIDRIHSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQNNMI 184
Query: 269 PLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSED 328
PL+ESI++ P P + D QM + L+Y+ + G I +GR+ G ++ +V +
Sbjct: 185 PLYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIIDRFG 244
Query: 329 SCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVEE 388
R +++++ Y R+ AGDI A+ G++ ++I +TI + +PLP++ ++E
Sbjct: 245 KHRSGKVNKVLNYFGLKRMEINQGYAGDIIAITGLNKLKISDTICHPDNLQPLPALSIDE 304
Query: 389 PTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGTL 448
PTV M FS+NTSPF G+EGKY+TSR + +RL +E N+A+++ + + + F VSGRG L
Sbjct: 305 PTVNMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNVALQIKETKDPNIFSVSGRGEL 364
Query: 449 HITILIENI 457
H++ILIEN+
Sbjct: 365 HLSILIENM 373
>sp|Q89AC9|TYPA_BUCBP GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=typA PE=3 SV=2
Length = 611
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 262/370 (70%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
++RNIAIIAHVDHGKTTLVD +L+Q+ F+ ++ ERIMDSNDLE+ERGITIL+KNT+I
Sbjct: 8 NLRNIAIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAI 67
Query: 148 TYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAV 207
+ +INIIDTPGH+DFGGEVERIL+MV+ VLLVVD++EGPMPQTRFV +KA +G
Sbjct: 68 QWKKYRINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKP 127
Query: 208 VVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDL 267
+VV+NKIDR ARP++VI+ F+LF+ LNATDEQ DF IY S + G +G+S +++ D+
Sbjct: 128 IVVINKIDRKHARPNWVIDQIFDLFVNLNATDEQLDFPTIYTSALLGTSGVSYNHMNPDM 187
Query: 268 GPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSE 327
PL+ +I++ P P + + QM + L+YD + G I IGR++ G + + + +
Sbjct: 188 IPLYNAIVKYTPPPTVYPNCPFQMQISQLDYDNYLGIIGIGRINKGSVTSNQSISIINNT 247
Query: 328 DSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVE 387
+ R +I ++ Y +++ +GDI A+ GID + I +TI D LP +K++
Sbjct: 248 EVKRTGKIGKILQYLGLNKIEINEAQSGDIIAITGIDKLNISDTICDPQYISALPMLKID 307
Query: 388 EPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGT 447
EPTV+M FS+N SPF G EGKY+TSR + +RL +E N+A+++ + +TF VSGRG
Sbjct: 308 EPTVEMLFSVNKSPFSGTEGKYITSRQIFNRLKKEENYNVALKIKETNDTNTFSVSGRGE 367
Query: 448 LHITILIENI 457
LH++ILIEN+
Sbjct: 368 LHLSILIENM 377
>sp|Q8K9C8|TYPA_BUCAP GTP-binding protein TypA/BipA homolog OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=typA PE=3 SV=1
Length = 609
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 270/370 (72%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
+IRNIAIIAHVDHGKTTL+D +L+Q+ F+ ++ KERIMDSNDLE+ERGITILSKNTSI
Sbjct: 4 NIRNIAIIAHVDHGKTTLLDQLLQQSGTFQKHEEKKERIMDSNDLEKERGITILSKNTSI 63
Query: 148 TYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAV 207
+ + KINI+DTPGH+DFGGEVER+++MV+ VLL+VD+++GPMPQTRFV KKA ++G
Sbjct: 64 KWKEYKINIVDTPGHADFGGEVERVMSMVDSVLLIVDALDGPMPQTRFVTKKAFKYGLNP 123
Query: 208 VVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDL 267
+VV+NKIDR ++RPD+VIN F+LF+ LNA D+Q DF IY S I G +G++ ++ +++
Sbjct: 124 IVVINKIDRKNSRPDWVINEIFDLFVNLNANDKQLDFPIIYTSAILGTSGINYLDMKENM 183
Query: 268 GPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSE 327
PL+E+I++ P P ++ + QM + L+Y+ + G I +GR+ G ++ V + S
Sbjct: 184 IPLYEAIIKYAPAPNVDPNQKFQMQISQLDYNNYLGVIGVGRIKQGHIKPNDSVVIIDSL 243
Query: 328 DSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVE 387
+ R +I+++ Y R+ + AGDI A+ G++ + I +TI + PLP + ++
Sbjct: 244 GNTRNGKINKVLNYFGLKRLEIQKGDAGDIIAITGLNKLNISDTICHPDNLCPLPPLIID 303
Query: 388 EPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETADTFIVSGRGT 447
EPTV M FS+NTSPF G+EGKY+TSR + +RL +E N+A++V + + A+ F VSGRG
Sbjct: 304 EPTVNMFFSVNTSPFSGKEGKYITSRQILERLKKETIHNVALQVKETKDANIFSVSGRGE 363
Query: 448 LHITILIENI 457
LH++ILIEN+
Sbjct: 364 LHLSILIENM 373
>sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=typA PE=3 SV=1
Length = 599
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/371 (51%), Positives = 258/371 (69%), Gaps = 3/371 (0%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
+IRNIA+IAHVDHGKTTLVD +L Q+ F + + V ER+MDSNDLERERGITILSKNT+I
Sbjct: 3 NIRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLERERGITILSKNTAI 62
Query: 148 TYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAV 207
Y DTKINIIDTPGH+DFGGEVER+L MV+GVLL+VD+ EG MPQT+FV+KKAL FG
Sbjct: 63 YYKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICP 122
Query: 208 VVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDL 267
+VVVNKID+P+A PD V++ F+LF+ + A+D+Q DF +YA+ G A S D+ +L
Sbjct: 123 IVVVNKIDKPAAEPDRVVDEVFDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEKKNL 182
Query: 268 GPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSE 327
PLFE+I+ +P P D LQM L+YD + G+I I R+ G ++K V + S+
Sbjct: 183 EPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNESVLLMKSD 242
Query: 328 DSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVE 387
S RI++L + +R E AGDI A+ G + + +G+++ D + PL + +E
Sbjct: 243 GSKENGRITKLIGFLGLARTEIENAYAGDIVAIAGFNAMDVGDSVVDPANPMPLDPMHLE 302
Query: 388 EPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVAD-GETADTFIVSGRG 446
EPT+ + F++N SP G EGK+VT+ L+DRL +E++ N+AM+ + GE F VSGRG
Sbjct: 303 EPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGEG--KFKVSGRG 360
Query: 447 TLHITILIENI 457
L ITIL EN+
Sbjct: 361 ELQITILAENL 371
>sp|Q9ZLZ3|TYPA_HELPJ GTP-binding protein TypA/BipA homolog OS=Helicobacter pylori
(strain J99) GN=typA PE=3 SV=1
Length = 599
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/371 (50%), Positives = 258/371 (69%), Gaps = 3/371 (0%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
+IRNIA+IAHVDHGKTTLVD +L Q+ F + + V ER+MDSNDLE+ERGITILSKNT+I
Sbjct: 3 NIRNIAVIAHVDHGKTTLVDGLLSQSGTFSEREKVDERVMDSNDLEKERGITILSKNTAI 62
Query: 148 TYNDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAV 207
Y DTKINIIDTPGH+DFGGEVER+L MV+GVLL+VD+ EG MPQT+FV+KKAL FG
Sbjct: 63 YYKDTKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQEGVMPQTKFVVKKALSFGICP 122
Query: 208 VVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLADDL 267
+VVVNKID+P+A PD V++ F+LF+ + A+D+Q DF +YA+ G A S D+ +L
Sbjct: 123 IVVVNKIDKPAAEPDRVVDEVFDLFVAMGASDKQLDFPVVYAAARDGYAMKSLDDEKKNL 182
Query: 268 GPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVCTSE 327
PLFE+I+ +P P D LQM L+YD + G+I I R+ G ++K V + S+
Sbjct: 183 EPLFETILEHVPSPSGSVDEPLQMQIFTLDYDNYVGKIGIARVFNGSVKKNESVLLMKSD 242
Query: 328 DSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIADKVSGKPLPSIKVE 387
S RI++L + +R E AGDI A+ G + + +G+++ D + PL + +E
Sbjct: 243 GSKENGRITKLIGFLGLARTEIENAYAGDIVALAGFNAMDVGDSVVDPTNPMPLDPMHLE 302
Query: 388 EPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVAD-GETADTFIVSGRG 446
EPT+ + F++N SP G EGK+VT+ L+DRL +E++ N+AM+ + GE F VSGRG
Sbjct: 303 EPTMSVYFAVNDSPLAGLEGKHVTANKLKDRLLKEMQTNIAMKCEEMGEG--KFKVSGRG 360
Query: 447 TLHITILIENI 457
L ITIL EN+
Sbjct: 361 ELQITILAENL 371
>sp|Q5SKA7|LEPA_THET8 Elongation factor 4 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=lepA PE=3 SV=1
Length = 610
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 173/319 (54%), Gaps = 32/319 (10%)
Query: 84 MRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSK 143
M S IRN +IIAHVDHGK+TL D +L+ D + ++E+ +DS +LERERGITI +
Sbjct: 4 MDLSRIRNFSIIAHVDHGKSTLADRILELTHAVSDRE-MREQFLDSLELERERGITIKAS 62
Query: 144 NTSITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLK 198
+TY + ++IDTPGH DF EV R L VEGVLLVVD+ +G +T
Sbjct: 63 AVRVTYRAKDGEEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY 122
Query: 199 KALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGL 258
ALE GH ++ V+NKID P+ARP E+ +E+ +AI+ASG G+
Sbjct: 123 MALEHGHVIIPVINKIDLPNARP-------LEVALEVEEVLGLPADEAIFASGKTGEG-- 173
Query: 259 SPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKG 318
+ + E+I++ IP P+ + + L+ L + YD ++G I RL G +R G
Sbjct: 174 --------VEEILEAIVQRIPPPKGDPEAPLKALIFDSVYDAYQGVIPYLRLFEGRVRPG 225
Query: 319 MEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGD----ICAVCGIDDIQIGETI-- 372
+R+ ++ ++ V+ V+ E + AG+ + A+ I D+Q+G+TI
Sbjct: 226 DRIRIYSTGKEFTVDKVG---VFTPQGLVATEALEAGEVGWLVAAIRDIHDVQVGDTITL 282
Query: 373 ADKVSGKPLPSIKVEEPTV 391
AD+ + P P + +P V
Sbjct: 283 ADRPTPSPYPGFRPAKPVV 301
>sp|Q72KV2|LEPA_THET2 Elongation factor 4 OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=lepA PE=3 SV=1
Length = 610
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 172/319 (53%), Gaps = 32/319 (10%)
Query: 84 MRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSK 143
M S IRN +IIAHVDHGK+TL D +L+ D + ++E+ +DS +LERERGITI +
Sbjct: 4 MDLSRIRNFSIIAHVDHGKSTLADRILELTHAVSDRE-MREQFLDSLELERERGITIKAS 62
Query: 144 NTSITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLK 198
+ Y + ++IDTPGH DF EV R L VEGVLLVVD+ +G +T
Sbjct: 63 AVRVRYRAKDGEEYVFHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFY 122
Query: 199 KALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGL 258
ALE GH ++ V+NKID P+ARP E+ +E+ +AI+ASG G+
Sbjct: 123 MALEHGHVIIPVINKIDLPNARP-------LEVALEVEEVLGLPADEAIFASGKTGEG-- 173
Query: 259 SPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKG 318
+ + E+I++ IP P+ + + L+ L + YD ++G I RL G +R G
Sbjct: 174 --------VEEILEAIVQRIPPPKGDPEAPLKALIFDSVYDAYQGVIPYLRLFEGRVRPG 225
Query: 319 MEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGD----ICAVCGIDDIQIGE--TI 372
+R+ ++ ++ V+ V+ E + AG+ + A+ I D+Q+G+ T+
Sbjct: 226 DRIRIYSTGKEFTVDKVG---VFTPQGLVATEALEAGEVGWLVAAIRDIHDVQVGDTLTL 282
Query: 373 ADKVSGKPLPSIKVEEPTV 391
AD+ + P P + +P V
Sbjct: 283 ADRPTPSPYPGFRPAKPVV 301
>sp|Q2W0F9|LEPA_MAGSA Elongation factor 4 OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=lepA PE=3 SV=1
Length = 600
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 59/396 (14%)
Query: 83 LMRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILS 142
+ + S IRN +I+AH+DHGK+TL D +++ + + +KE+++DS D+ERERGITI +
Sbjct: 1 MTKLSHIRNFSIVAHIDHGKSTLADRLIQACGAI-EAREMKEQMLDSMDIERERGITIKA 59
Query: 143 KNTSITYNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVL 197
+ + Y ++N++DTPGH DF EV R L EG LLVVD+ +G QT +
Sbjct: 60 QTVRLDYKAKDGKTYQLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANV 119
Query: 198 KKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAG 257
AL+ GH VV V+NKID P+A P+ V E I L+ +D A I K G
Sbjct: 120 YHALDAGHEVVPVLNKIDLPAAEPERV-KQQIEDVIGLDTSD---------AVMISAKTG 169
Query: 258 LSPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRK 317
+ +G + E+++ +P P + D LQ L + YD + G I + R+ GVL+K
Sbjct: 170 IG-------IGDVLEALVNRLPCPEGDADAPLQALLVDSWYDPYLGVIILVRIKNGVLKK 222
Query: 318 GMEVRVCTSE-----DSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQI 368
G ++R+ ++ DSC Y + E + G++ A+ + D ++
Sbjct: 223 GQKIRMMATQAAYQVDSCGYFTPKLVQTTE---------LRPGEMGFFTAAIKAVADTKV 273
Query: 369 GETIAD--KVSGKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELER 425
G+T+ D K + PLP K P V F I+ + + +LRD L + L
Sbjct: 274 GDTVTDDKKPADTPLPGFKPSVPVVWCGLFPIDAADY----------EDLRDSLAK-LRL 322
Query: 426 NLAMRVADGETADTFIVSGR----GTLHITILIENI 457
N A + ET+ R G LH+ I+ E +
Sbjct: 323 NDASFQYEPETSAALGFGFRCGFLGLLHLEIIQERL 358
>sp|Q182F4|LEPA_CLOD6 Elongation factor 4 OS=Clostridium difficile (strain 630) GN=lepA
PE=3 SV=1
Length = 601
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 205/388 (52%), Gaps = 47/388 (12%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
++S RN +IIAH+DHGK+TL D +++Q + + + +K +++D+ DLERERGITI +N
Sbjct: 4 KQSRTRNFSIIAHIDHGKSTLADRLIQQTGLVSE-RDMKSQLLDNMDLERERGITIKLQN 62
Query: 145 TSITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+ Y N+ +N+IDTPGH DF EV R L EG LLVVD+ +G QT +
Sbjct: 63 IRLMYKAKDGNEYYLNLIDTPGHVDFNYEVSRSLAACEGALLVVDAAQGVEAQTLANVYL 122
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
A++ ++ ++NKID PSARP+ V N E I L++++ A I K GL
Sbjct: 123 AIDQDLEILPIINKIDLPSARPEEVKNE-IEDLIGLDSSE---------APLISAKTGL- 171
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
N+ D + E I++ +P P+ + + L+ L + YD +KG +A R+ G ++KGM
Sbjct: 172 --NIED----VLEDIVKNVPPPKGDNEAPLKALIFDSYYDAYKGVVAYVRVFEGTVKKGM 225
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG-IDDI---QIGETIAD- 374
+++ + + ++E+ V +E+ +AGD+ + I DI ++G+TI D
Sbjct: 226 TIKMMNTN---KKFEVTEVGVMAPGQTELSEL-SAGDVGYIAASIKDIRSCRVGDTITDS 281
Query: 375 -KVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVAD 433
+ +PLP K P V + G KY N+RD L +L+ N A +
Sbjct: 282 NNPTEEPLPGYKKATPMVYCGI------YPGEGEKY---ENVRDAL-EKLQVNDAALEYE 331
Query: 434 GETADTFIVSGR----GTLHITILIENI 457
ET+ R G LH+ I+ E +
Sbjct: 332 AETSAALGFGFRCGFLGLLHMEIMQERL 359
>sp|A6TSM4|LEPA_ALKMQ Elongation factor 4 OS=Alkaliphilus metalliredigens (strain QYMF)
GN=lepA PE=3 SV=1
Length = 602
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 204/388 (52%), Gaps = 47/388 (12%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
R+ IRN +IIAH+DHGK+TL D ++++ + + ++ +++D+ +LERERGITI ++
Sbjct: 5 RQRKIRNFSIIAHIDHGKSTLADRLIERTGLISQRE-MQAQVLDNMELERERGITIKLQS 63
Query: 145 TSITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+ Y D +N+IDTPGH DF EV R L EG +LVVD+ +G QT +
Sbjct: 64 IRLIYKAKDGQDYYLNLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTMANVYL 123
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
ALE ++ V+NKID PSARPD I E I L+A++ A I K GL+
Sbjct: 124 ALEQNLEIIPVINKIDLPSARPDE-IKREIEDIIGLDASE---------APLISAKDGLN 173
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
D+ + E+I++ IP P +++ L+ L + YD +KG +A R+ G ++KGM
Sbjct: 174 IDD-------VLEAIVKNIPPPTEDEEAPLKALVFDSYYDNYKGVVAYTRVVEGTVKKGM 226
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG-IDDI---QIGETIADK 375
++R+ ++ + ++E+ VY + + ++AGD+ + I D+ ++G+TI D
Sbjct: 227 KIRMMATK---KEFEVTEVGVYSP-GPIQLDQLSAGDVGYIAASIKDVRYCRVGDTITDA 282
Query: 376 V--SGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVAD 433
+ + LP + P V P G KY R+ DR L+ N A V +
Sbjct: 283 LNPTEHSLPGYRKVTPMV----YCGVYPAEGE--KYEDVRDALDR----LQVNDAALVFE 332
Query: 434 GETADTFIVSGR----GTLHITILIENI 457
ET+ R G LH+ I+ E +
Sbjct: 333 AETSAALGFGFRCGFLGLLHMEIIQERL 360
>sp|Q2RNY6|LEPA_RHORT Elongation factor 4 OS=Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255) GN=lepA PE=3 SV=2
Length = 601
Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/329 (34%), Positives = 172/329 (52%), Gaps = 35/329 (10%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
S IRN AIIAH+DHGK+TL D +++ + + +KE+++DS DLERERGITI ++
Sbjct: 5 SHIRNFAIIAHIDHGKSTLADRLIQTCGGV-EARDMKEQLLDSMDLERERGITIKAQTVR 63
Query: 147 ITYNDT------KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKA 200
+ Y ++N++DTPGH DF EV R L EG LLVVD+ +G QT + +A
Sbjct: 64 LHYTAKSDGRTYQLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQA 123
Query: 201 LEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSP 260
++ GH ++ V+NKID P+A P+ I E I L+ +D A GI K GL+
Sbjct: 124 IDAGHEIIPVLNKIDLPAAEPER-IKQQIEDVIGLDTSD---------AVGISAKTGLNI 173
Query: 261 DNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGME 320
D + E+++ +P P + D Q L + YD + G + + R+ GVLRKGM+
Sbjct: 174 DQ-------VLEALVLRLPPPTGDVDAPTQALLVDSWYDSYLGVVILVRVRHGVLRKGMK 226
Query: 321 VRVCTSEDSCRYARIS----ELFVYEKFSRVSAEIVAAGDICAVCGIDDIQIGETIAD-- 374
+ + + ++ ++ + S V AG + + D QIG+TI D
Sbjct: 227 MLMMATGAVHPIDKVGVFTPKMLETDSLSAGEMGFVMAG----IKSVADCQIGDTITDDR 282
Query: 375 KVSGKPLPSIKVEEPTVKMS-FSINTSPF 402
+ + LP K P V F +++S F
Sbjct: 283 APAAEALPGFKASIPVVWCGLFPVDSSDF 311
>sp|B3CPV1|LEPA_WOLPP Elongation factor 4 OS=Wolbachia pipientis subsp. Culex pipiens
(strain wPip) GN=lepA PE=3 SV=1
Length = 598
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/387 (31%), Positives = 201/387 (51%), Gaps = 49/387 (12%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
++IRN AIIAH+DHGK+TL D ++++ + + + +++DS D+ERERGITI ++
Sbjct: 2 NNIRNFAIIAHIDHGKSTLADRLIEECNGL-ETREMTNQVLDSMDIERERGITIKAQTVR 60
Query: 147 ITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKAL 201
+ Y N +N++DTPGH DF EV R L EG LLVVDS +G QT + KA+
Sbjct: 61 LNYTANNGNKYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANVYKAI 120
Query: 202 EFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPD 261
+ H ++VV+NK+D P+A P+ I E I ++AT+ I K GL
Sbjct: 121 DNNHEIIVVLNKVDLPAADPER-IKLQIEEVIGIDATESIL---------ISAKTGLG-- 168
Query: 262 NLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEV 321
+ + E+I+ +P P+ + + LQ + + YD + G + + R+ GVL+KGM
Sbjct: 169 -----IKDVLEAIVTKLPAPQGDTNAPLQAILVDSWYDPYLGVVILVRVKNGVLKKGM-- 221
Query: 322 RVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG----IDDIQIGETIAD--K 375
R+ ++ Y ++ + ++ ++ E+ +AG++ + + D ++G+TI + +
Sbjct: 222 RIVMMSNNATY-QVDNIGIFTPKKVMTGEL-SAGEVGFITASMKEVADCKVGDTITEEKR 279
Query: 376 VSGKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADG 434
K LP K P V S F NT F KY LR+ L +L N A D
Sbjct: 280 PCSKALPGFKEVHPVVFCSIFPNNTDDF-----KY-----LREAL-EKLHLNDASFTFDA 328
Query: 435 ETADTFIVSGR----GTLHITILIENI 457
ET++ R G LH+ ++ E +
Sbjct: 329 ETSNALGYGFRCGFLGMLHLEVIQERL 355
>sp|C4K3Z1|LEPA_HAMD5 Elongation factor 4 OS=Hamiltonella defensa subsp. Acyrthosiphon
pisum (strain 5AT) GN=lepA PE=3 SV=1
Length = 599
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 168/314 (53%), Gaps = 35/314 (11%)
Query: 90 RNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSITY 149
RN +IIAH+DHGK+TL D +++ + + + ++DS DLERERGITI +++ ++ Y
Sbjct: 5 RNFSIIAHIDHGKSTLSDRIIQLCGGLTEREMASQ-VLDSMDLERERGITIKAQSVTLYY 63
Query: 150 -----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEFG 204
N ++N IDTPGH DF EV R L EG LLVVD+ +G QT ALE
Sbjct: 64 QAQDGNTYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTLANCYTALEMN 123
Query: 205 HAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNLA 264
VV V+NKID P++ PD I E + ++ATD A K G+ +A
Sbjct: 124 LEVVPVLNKIDLPASDPDR-IAEEIEDIVGIDATD---------AVRCSAKTGI---GIA 170
Query: 265 DDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRVC 324
D + E ++R IP P+ + G LQ L + +D + G +++ RL G LRKG +V+V
Sbjct: 171 D----VLERLVRDIPAPKGDPKGTLQALIIDSWFDNYLGVVSLIRLKNGTLRKGDKVKVM 226
Query: 325 TSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDIQIGETIADKVS------ 377
++ R+ +F ++F +I+ G++ VC I DI +G + D ++
Sbjct: 227 STGQIYNVERLG-IFTPKRF---DTDILNCGEVGWLVCAIKDI-LGAPVGDTLTLSRHPA 281
Query: 378 GKPLPSIKVEEPTV 391
KPLP K +P V
Sbjct: 282 EKPLPGFKKVKPQV 295
>sp|Q3SVT1|LEPA_NITWN Elongation factor 4 OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=lepA PE=3 SV=1
Length = 603
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 168/318 (52%), Gaps = 35/318 (11%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTV-KERIMDSNDLERERGITILSKNT 145
++IRN +I+AH+DHGK+TL D +++ D + KE+++DS D+ERERGITI ++
Sbjct: 7 ANIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGITIKAQTV 66
Query: 146 SITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKA 200
+ Y D N++DTPGH DF EV R L EG LLVVD+ +G QT + +A
Sbjct: 67 RLKYRAKDGKDYVFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQA 126
Query: 201 LEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS- 259
L+ H +V V+NK+D P+A PD V E I ++A+D A I K GL
Sbjct: 127 LDNNHEIVPVLNKVDLPAAEPDKV-KQQIEDVIGIDASD---------AVMISAKTGLGV 176
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
PD + E+I+ +P P+ ++D L+ L + YD + G + + R+ G LRKG
Sbjct: 177 PD--------VLEAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVIDGALRKGS 228
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIAD- 374
+R+ + + R+ F K +V + G+I A+ + D ++G+TI D
Sbjct: 229 RIRMIGTSAAYDVERVG--FFTPKMQQVDE--LGPGEIGFITAAIKEVADTRVGDTITDD 284
Query: 375 -KVSGKPLPSIKVEEPTV 391
K + LP K P V
Sbjct: 285 RKPVTEMLPGFKPAIPVV 302
>sp|Q3J4P0|LEPA_RHOS4 Elongation factor 4 OS=Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM 158) GN=lepA PE=3 SV=1
Length = 599
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 177/327 (54%), Gaps = 36/327 (11%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +I+AH+DHGK+TL D +++ + + +K +I+DS D+ERERGITI + I
Sbjct: 7 IRNFSIVAHIDHGKSTLADRLIQLTGTVAE-RDMKAQILDSMDIERERGITIKANTVRID 65
Query: 149 Y--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y D + +N+IDTPGH DF EV R + VEG LLVVD+ +G QT + +AL+
Sbjct: 66 YPAKDGRTYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDASQGVEAQTLANVYQALDA 125
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS-PDN 262
GH +V V+NKID P+A P+ V S E I L+A+D A I K+GL PD
Sbjct: 126 GHEIVPVLNKIDLPAAEPERV-KSQIEDVIGLDASD---------AVLISAKSGLGIPD- 174
Query: 263 LADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVR 322
+ E+I+ +P P+ +++ L+ + + YD + G + + R+ GV+RKG V+
Sbjct: 175 -------VLEAIVHRLPPPKGDREAPLKAMLVDSWYDAYLGVVVMIRVMDGVIRKGDRVK 227
Query: 323 VCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIADKVSG 378
+ + R++ L K V + G+I ++ + D ++G+TI + G
Sbjct: 228 MMQTGAVYGIDRLAVL----KPQMVDIAELGPGEIGVLTASIKQVRDTRVGDTITHEKKG 283
Query: 379 --KPLPSIKVEEPTVKMS-FSINTSPF 402
PLP K +P V F ++ + F
Sbjct: 284 CAAPLPGFKPAQPVVFCGLFPVDANDF 310
>sp|Q89BJ8|LEPA_BRAJA Elongation factor 4 OS=Bradyrhizobium japonicum (strain USDA 110)
GN=lepA PE=3 SV=2
Length = 603
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 170/318 (53%), Gaps = 35/318 (11%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTV-KERIMDSNDLERERGITILSKNT 145
S+IRN +I+AH+DHGK+TL D +++ D + KE+++DS D+ERERGITI ++
Sbjct: 7 SNIRNFSIVAHIDHGKSTLADRLIQMTGGLTDREMAGKEQVLDSMDIERERGITIKAQTV 66
Query: 146 SITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKA 200
+ Y D N++DTPGH DF EV R L EG LLVVD+ +G QT + +A
Sbjct: 67 RLAYRAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQA 126
Query: 201 LEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS- 259
L+ H +V V+NK+D P+A P+ V E I ++A+D A I K GL
Sbjct: 127 LDNNHEIVPVLNKVDLPAAEPEKV-KQQIEDVIGIDASD---------AVMISAKTGLGV 176
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
PD + E+I+ +P P+ ++D L+ L + YD + G + + R+ GV++KG
Sbjct: 177 PD--------VLEAIVTRLPPPKGDRDATLKALLVDSWYDVYLGVVVLIRVVDGVMKKGS 228
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIAD- 374
VR+ + + R+ F K ++V + G+I A+ + D ++G+TI D
Sbjct: 229 RVRMMGTGAAYDVERVG--FFTPKMTQVDE--LGPGEIGFITAAIKEVADTRVGDTITDD 284
Query: 375 -KVSGKPLPSIKVEEPTV 391
K + LP K P V
Sbjct: 285 RKPVTEMLPGFKPAIPVV 302
>sp|A4WX88|LEPA_RHOS5 Elongation factor 4 OS=Rhodobacter sphaeroides (strain ATCC 17025 /
ATH 2.4.3) GN=lepA PE=3 SV=1
Length = 599
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/329 (34%), Positives = 177/329 (53%), Gaps = 36/329 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +I+AH+DHGK+TL D +++ + + +K +I+DS ++ERERGITI + I
Sbjct: 7 IRNFSIVAHIDHGKSTLADRLIQLTGTVAE-RDMKAQILDSMEIERERGITIKANTVRIE 65
Query: 149 Y--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y D K +N+IDTPGH DF EV R + VEG LLVVD+ +G QT + +AL+
Sbjct: 66 YPAKDGKTYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDASQGVEAQTLANVYQALDA 125
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS-PDN 262
GH +V V+NKID P+A PD V + E I L+A+D A I K+GL PD
Sbjct: 126 GHEIVPVLNKIDLPAAEPDRV-RTQIEDVIGLDASD---------AVLISAKSGLGIPD- 174
Query: 263 LADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVR 322
+ E+I+ +P P+ ++ L+ + + YD + G + + R+ GV+RKG V+
Sbjct: 175 -------VLEAIVTRLPPPKGNREAPLKAMLVDSWYDAYLGVVVMIRVMDGVIRKGDRVK 227
Query: 323 VCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIADKVSG 378
+ + R++ L K V + G+I ++ + D ++G+TI + G
Sbjct: 228 MMQTGAVYGIDRLAVL----KPQMVDIAELGPGEIGVLTASIKQVRDTRVGDTITHEKKG 283
Query: 379 --KPLPSIKVEEPTVKMS-FSINTSPFVG 404
PLP K +P V F ++ + F G
Sbjct: 284 CEAPLPGFKPAQPVVFCGLFPVDANDFEG 312
>sp|Q2GJV7|LEPA_ANAPZ Elongation factor 4 OS=Anaplasma phagocytophilum (strain HZ)
GN=lepA PE=3 SV=1
Length = 598
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 200/390 (51%), Gaps = 49/390 (12%)
Query: 84 MRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSK 143
M RS IRN AIIAH+DHGK+TL D +++ + + +KE+++DS D+ERERGITI ++
Sbjct: 1 MNRSSIRNFAIIAHIDHGKSTLADRLIESCDALAE-RDMKEQVLDSMDIERERGITIKAQ 59
Query: 144 NTSITYNDTK-----INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLK 198
+ Y +N++DTPGH DF EV R L EG LLV+DS +G QT +
Sbjct: 60 TVRLKYTSKAGEVYYLNLVDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVY 119
Query: 199 KALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGL 258
KA+E H ++ V+NK+D SA P+ V S E I L+A+D A + K G+
Sbjct: 120 KAIENNHEIITVLNKVDLVSADPEKV-KSQVETIIGLDASD---------ALLVSAKTGI 169
Query: 259 SPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKG 318
++ + E+I+ +P P +++ L+ + + YD + G + + R+ GVL+KG
Sbjct: 170 GIND-------VLEAIIERLPAPEGDEEAPLKAVLVDSWYDPYLGIVILVRIKDGVLKKG 222
Query: 319 MEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAV-CGIDDI---QIGETIAD 374
M ++C Y + + V+ ++ + ++ G+I + GI ++ ++G+T+ +
Sbjct: 223 M--KICMMSTGAVYT-VDNVGVFTPHKKM-VDALSVGEIGFITAGIKELLACKVGDTVTE 278
Query: 375 KV--SGKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRV 431
+ LP + P V S F ++ F +LR+ L + L+ N A
Sbjct: 279 DARRCAEALPGFRATCPVVFCSLFPVDAGSF----------EHLREALGK-LQLNDASFT 327
Query: 432 ADGETADTFIVSGR----GTLHITILIENI 457
D E++ R G LH+ ++ E +
Sbjct: 328 FDIESSTALGYGFRCGFLGMLHLEVVQERL 357
>sp|Q1QX26|LEPA_CHRSD Elongation factor 4 OS=Chromohalobacter salexigens (strain DSM 3043
/ ATCC BAA-138 / NCIMB 13768) GN=lepA PE=3 SV=1
Length = 606
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 201/386 (52%), Gaps = 50/386 (12%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D +++ + + +KE+++DS DLERERGITI +++ ++
Sbjct: 13 IRNFSIIAHIDHGKSTLSDRIIQICGGLTERE-LKEQVLDSMDLERERGITIKAQSVTLD 71
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y ++N IDTPGH DF EV R L EG LLVVD+ +G Q+ A+E
Sbjct: 72 YKAEDGQVYQLNFIDTPGHVDFSYEVSRSLYACEGALLVVDAGQGVEAQSVANCYTAVEQ 131
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
G V+ V+NK+D P A PD V + E+ I ++A+D A + K+GL
Sbjct: 132 GLEVLPVLNKMDLPQADPDRVAHEVEEI-IGIDASD---------ACRVSAKSGLG---- 177
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ L E ++R +P P+ + + LQ L + +D + G I++ RL G ++KG ++R+
Sbjct: 178 ---MEALLERLVRDVPPPKGDPEAPLQALIVDSWFDNYLGVISLVRLFDGTIKKGDKIRM 234
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDIC-AVCGIDDIQ---IGETIADKVSGK 379
++E R + E+ ++ R I+ AG++ V GI DI +G+TI G+
Sbjct: 235 KSTE---RAWEVGEVGIFTP-KRKETGILRAGEVGFVVAGIKDIHGAPVGDTIVHAKGGE 290
Query: 380 P---LPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGE 435
LP + +P V F +++ + + RD L + L N A + E
Sbjct: 291 DVARLPGFQKVKPQVYAGMFPVSSDDY----------EDFRDALEK-LALNDASLDYEPE 339
Query: 436 TADT----FIVSGRGTLHITILIENI 457
+D F V GTLH+ I+ E +
Sbjct: 340 NSDALGFGFRVGFLGTLHMEIVQERL 365
>sp|A8EY28|LEPA_RICCK Elongation factor 4 OS=Rickettsia canadensis (strain McKiel)
GN=lepA PE=3 SV=1
Length = 600
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 118/381 (30%), Positives = 190/381 (49%), Gaps = 41/381 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D +++ F+ + K+ ++DS D+E+ERGITI ++ +
Sbjct: 7 IRNFSIIAHIDHGKSTLADRLIEHCGGFQAREMSKQ-VLDSMDIEKERGITIKAQTVKLL 65
Query: 149 Y-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y N +N++DTPGH DF EV R L EG LLVVDS +G QT + KA+E
Sbjct: 66 YKAKDGNTYYLNLMDTPGHVDFAYEVSRSLAACEGSLLVVDSTQGVEAQTLANVYKAIEN 125
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
H +V V+NKID P++ P++V E I ++A++ A I K+G+ D
Sbjct: 126 NHEIVPVLNKIDLPASEPEHV-KQQIEDIIGIDASE---------ALLISAKSGIGID-- 173
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ E+I+ +P P+ D L+ L + YD + G + + R+ G LRK M +++
Sbjct: 174 -----LVLEAIVNKLPPPKESSDDILKALLVDSWYDPYLGVVILVRIIDGALRKNMRIKM 228
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIAD--KVS 377
+ + + Y + A+++ AG+I ++ + D ++G+TI D K
Sbjct: 229 MATNSVYKVEHVG----YFTPKKHIADVLYAGEIGFFTASIKQVADCKVGDTITDEKKPC 284
Query: 378 GKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYR-ELERNLAMRVADGET 436
+ LP K P V F S + +L D + E+E + A+ V
Sbjct: 285 EQALPGFKPNLPVVFCGFYPTDSSEFEYLKDSLAKLHLNDSSFEYEMESSSALGVG---- 340
Query: 437 ADTFIVSGRGTLHITILIENI 457
F G LH+ I+ E +
Sbjct: 341 ---FRCGFLGLLHLEIIQERL 358
>sp|Q72E76|LEPA_DESVH Elongation factor 4 OS=Desulfovibrio vulgaris (strain Hildenborough
/ ATCC 29579 / NCIMB 8303) GN=lepA PE=3 SV=1
Length = 601
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 169/318 (53%), Gaps = 33/318 (10%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
R+ IRN +IIAH+DHGK+TL D +L+ + D + +++ +D DLERERGITI ++
Sbjct: 3 RQEHIRNFSIIAHIDHGKSTLADRILEVTGLVSDREK-RDQYLDRMDLERERGITIKAQT 61
Query: 145 TSITYNDTK-----INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
I + +N+IDTPGH DF EV R L +G LLVVD+ +G QT +
Sbjct: 62 VRIPFTSKTGRKYILNLIDTPGHVDFNYEVSRSLAACDGALLVVDASQGVEAQTLANVYL 121
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
AL+ H ++ V+NKID PS+ D V + E I L+ TD A + K G++
Sbjct: 122 ALDHDHDIIPVLNKIDLPSSDVDRV-KAEIEESIGLDCTD---------AIAVSAKTGMN 171
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
D + E+I+ +P P + L+ L + YD ++G + + R+ GVLRKG
Sbjct: 172 VDK-------VLEAIVERLPAPEGNLNAPLKALIFDSWYDSYQGVVVLFRVMDGVLRKGD 224
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG----IDDIQIGETI--A 373
VR+ +E S R+ V+ AE+ AG++ +C + D ++G+TI
Sbjct: 225 RVRMFATEKSYEVIRLG---VFSPDIVDVAEL-GAGEVGFLCANIKELGDAKVGDTITHT 280
Query: 374 DKVSGKPLPSIKVEEPTV 391
D+ + +P+P K +P V
Sbjct: 281 DRPASEPVPGFKEVQPMV 298
>sp|Q65H50|LEPA_BACLD Elongation factor 4 OS=Bacillus licheniformis (strain DSM 13 / ATCC
14580) GN=lepA PE=3 SV=1
Length = 612
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 205/396 (51%), Gaps = 49/396 (12%)
Query: 78 EKKSRLMRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERG 137
+K+ RL R+S IRN +IIAH+DHGK+TL D +L++ + +KE+++DS DLERERG
Sbjct: 3 DKEKRLQRQSRIRNFSIIAHIDHGKSTLADRILEKTAAITQRE-MKEQLLDSMDLERERG 61
Query: 138 ITILSKNTSITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQ 192
ITI + + Y + ++IDTPGH DF EV R L EG +LVVD+ +G Q
Sbjct: 62 ITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQ 121
Query: 193 TRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGI 252
T + AL+ ++ V+NKID PSA P+ V E I L+A+ +A+ AS
Sbjct: 122 TLANVYLALDNDLEILPVINKIDLPSAEPERV-RQEVEDVIGLDAS------EAVLAS-- 172
Query: 253 QGKAGLSPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHA 312
KAG+ + + E I+ +P P + + LQ L + YD ++G +A R+
Sbjct: 173 -AKAGIGIEE-------ILEQIVEKVPAPSGDPEAPLQALIFDSLYDAYRGVVAYIRVVQ 224
Query: 313 GVLRKGMEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQI 368
G ++ G ++++ + + ++E+ V+ V A+ + GD+ A+ + D ++
Sbjct: 225 GTVKAGQKIKMMA---TGKEFEVTEVGVFTP-KAVPADELTVGDVGFLTAAIKNVGDTRV 280
Query: 369 GETI--ADKVSGKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELER 425
G+TI A+ + + LP + P V + I+T+ + +LR+ L +LE
Sbjct: 281 GDTITSAENPAPEALPGYRKLNPMVYCGLYPIDTAKY----------NDLREAL-EKLEL 329
Query: 426 NLAMRVADGETADTFIVSGR----GTLHITILIENI 457
N + + ET+ R G LH+ I+ E I
Sbjct: 330 NDSALQYEAETSQALGFGFRCGFLGMLHMEIIQERI 365
>sp|A9KF98|LEPA_COXBN Elongation factor 4 OS=Coxiella burnetii (strain Dugway 5J108-111)
GN=lepA PE=3 SV=1
Length = 602
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/326 (34%), Positives = 170/326 (52%), Gaps = 34/326 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D ++ + + +K +++DS D+ERERGITI +++ ++
Sbjct: 9 IRNFSIIAHIDHGKSTLADRFIQLCGGLSERE-MKAQVLDSMDIERERGITIKAQSVTLN 67
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
+ ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 68 FKSQDGHFYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQ 127
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
G V+ V+NKID P A P+ VI E I + A D AI S +G+
Sbjct: 128 GLVVLPVLNKIDLPQADPERVIQE-IEDVIGIEAHD------AIRVSAKEGRC------- 173
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ L E ++ IP P + + LQ L + +D + G +++ R+ AG LRKG ++RV
Sbjct: 174 ---VKELLEQLVVAIPPPVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDKIRV 230
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDI---QIGETI--ADKVS 377
++ +I R E ++AG + V GI DI +G+T+ A + +
Sbjct: 231 MSTGKDYYADQIGHF----TPKRQPLEELSAGAVGFVVAGIKDIFGAPVGDTLTHAKQSA 286
Query: 378 GKPLPSIKVEEPTVKMS-FSINTSPF 402
G PLP K +P V F IN+ +
Sbjct: 287 GSPLPGFKQVKPQVFAGLFPINSEEY 312
>sp|A3PHQ9|LEPA_RHOS1 Elongation factor 4 OS=Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9) GN=lepA PE=3 SV=1
Length = 602
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 35/322 (10%)
Query: 82 RLMRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITIL 141
R+ + IRN +I+AH+DHGK+TL D +++ + + +K +I+DS ++ERERGITI
Sbjct: 3 RMTQLDLIRNFSIVAHIDHGKSTLADRLIQLTGTVAE-RDMKAQILDSMEIERERGITIK 61
Query: 142 SKNTSITY--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFV 196
+ I Y D + +N+IDTPGH DF EV R + VEG LLVVD+ +G QT
Sbjct: 62 ANTVRIDYPAKDGRTYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDASQGVEAQTLAN 121
Query: 197 LKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKA 256
+ +AL+ GH +V V+NKID P+A P+ V S E I L+A+D A I K+
Sbjct: 122 VYQALDAGHEIVPVLNKIDLPAAEPERV-KSQIEDVIGLDASD---------AVLISAKS 171
Query: 257 GLS-PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVL 315
GL PD + E+I+ +P P+ +++ L+ + + YD + G + + R+ GV+
Sbjct: 172 GLGIPD--------VLEAIVHRLPPPKGDREAPLKAMLVDSWYDAYLGVVVMIRVMDGVI 223
Query: 316 RKGMEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGET 371
RKG V++ + R++ L K V + G+I ++ + D ++G+T
Sbjct: 224 RKGDRVKMMQTGAVYGIDRLAVL----KPQMVDIAELGPGEIGVLTASIKQVRDTRVGDT 279
Query: 372 IADKVSG--KPLPSIKVEEPTV 391
I + G PLP K +P V
Sbjct: 280 ITHEKKGCAAPLPGFKPAQPVV 301
>sp|B9KNH9|LEPA_RHOSK Elongation factor 4 OS=Rhodobacter sphaeroides (strain KD131 / KCTC
12085) GN=lepA PE=3 SV=1
Length = 602
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 175/322 (54%), Gaps = 35/322 (10%)
Query: 82 RLMRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITIL 141
R+ + IRN +I+AH+DHGK+TL D +++ + + +K +I+DS ++ERERGITI
Sbjct: 3 RMTQLDLIRNFSIVAHIDHGKSTLADRLIQLTGTVAE-RDMKAQILDSMEIERERGITIK 61
Query: 142 SKNTSITY--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFV 196
+ I Y D + +N+IDTPGH DF EV R + VEG LLVVD+ +G QT
Sbjct: 62 ANTVRIDYPAKDGRTYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDASQGVEAQTLAN 121
Query: 197 LKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKA 256
+ +AL+ GH +V V+NKID P+A P+ V S E I L+A+D A I K+
Sbjct: 122 VYQALDAGHEIVPVLNKIDLPAAEPERV-KSQIEDVIGLDASD---------AVLISAKS 171
Query: 257 GLS-PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVL 315
GL PD + E+I+ +P P+ +++ L+ + + YD + G + + R+ GV+
Sbjct: 172 GLGIPD--------VLEAIVHRLPPPKGDREAPLKAMLVDSWYDAYLGVVVMIRVMDGVI 223
Query: 316 RKGMEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGET 371
RKG V++ + R++ L K V + G+I ++ + D ++G+T
Sbjct: 224 RKGDRVKMMQTGAVYGIDRLAVL----KPQMVDIAELGPGEIGVLTASIKQVRDTRVGDT 279
Query: 372 IADKVSG--KPLPSIKVEEPTV 391
I + G PLP K +P V
Sbjct: 280 ITHEKKGCAAPLPGFKPAQPVV 301
>sp|Q3AF13|LEPA_CARHZ Elongation factor 4 OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=lepA PE=3 SV=1
Length = 603
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 177/318 (55%), Gaps = 33/318 (10%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
R+ IRN IIAH+DHGK+TL D +++ + + +KE+++D +LERERGITI ++
Sbjct: 4 RQELIRNFCIIAHIDHGKSTLADRLIEFTGALSERE-LKEQVLDQMELERERGITIKAQA 62
Query: 145 TSITY-----NDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+TY N +N+IDTPGH DF EV R L EG LLVVD+ +G QT +
Sbjct: 63 VKLTYKAKDGNTYYLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGIEAQTLANVYL 122
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
A+E ++ VVNKID P+A P+ V+ E I L+ + +AI AS G+
Sbjct: 123 AMEHDLELIPVVNKIDLPNAEPERVLKE-IEDVIGLDTS------EAILASAKTGQG--- 172
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
+ + E+I++ IP PR +++ L+ L + YD +KG IA RL G ++ GM
Sbjct: 173 -------IEEVLEAIVKRIPPPRGDEEKPLKALIFDSHYDPYKGVIAYIRLVDGFIKPGM 225
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETI--A 373
++++ +++ ++E+ +++ + E + AG++ + + D ++G+TI A
Sbjct: 226 KIKMMSNDKEF---EVTEVGIFKPY-LTPVEGLWAGEVGFIAAGIKNVRDCRVGDTITSA 281
Query: 374 DKVSGKPLPSIKVEEPTV 391
+ + +PLP K +P V
Sbjct: 282 ENPAKEPLPGYKQVKPMV 299
>sp|A8MFA6|LEPA_ALKOO Elongation factor 4 OS=Alkaliphilus oremlandii (strain OhILAs)
GN=lepA PE=3 SV=1
Length = 602
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 200/390 (51%), Gaps = 51/390 (13%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
R+ IRN +IIAH+DHGK+TL D +++ + + ++ +++D+ DLERERGITI +
Sbjct: 5 RQKKIRNFSIIAHIDHGKSTLADRLIEYTGLISQRE-MQSQMLDNMDLERERGITIKLQT 63
Query: 145 TSITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+ Y + +N+IDTPGH DF EV R L EG +L+VD+ +G QT +
Sbjct: 64 IRLVYKAKDGEEYYLNLIDTPGHVDFTYEVSRSLAACEGAVLIVDAAQGIEAQTLANVYL 123
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
ALE ++ V+NKID PSARPD I + E I L+A++ A I K GL
Sbjct: 124 ALEQDLEIIPVINKIDLPSARPDE-IKTEIEDIIGLDASE---------APLISAKEGL- 172
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
N+ D + ESI++ +P P+ + + L+ L + YD +KG IA R+ G ++KGM
Sbjct: 173 --NIED----VLESIVKNVPSPKGDINAPLKALIFDSYYDSYKGVIAYMRVMEGQVKKGM 226
Query: 320 EVRVCTSEDSCRYARISELFVYEKFS--RVSAEIVAAGDICAVCG-IDDI---QIGETIA 373
+V++ + + FS + + ++AGD+ + I D+ ++G+TI
Sbjct: 227 KVKMMATNKEFEVVEVG------AFSPGAIPLDSLSAGDVGYLAASIKDVRHCRVGDTIT 280
Query: 374 DKV--SGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRV 431
D + + PLP + P V + KY ++RD L +L+ N A V
Sbjct: 281 DALNPTESPLPGYRKVNPMVYCGI------YPAEGEKY---EDIRDAL-EKLQVNDAALV 330
Query: 432 ADGETADTFIVSGR----GTLHITILIENI 457
+ E++ R G LH+ I+ E +
Sbjct: 331 FEPESSAALGFGFRCGFLGLLHMEIIQERL 360
>sp|B4UDQ7|LEPA_ANASK Elongation factor 4 OS=Anaeromyxobacter sp. (strain K) GN=lepA PE=3
SV=1
Length = 601
Score = 155 bits (391), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 49/389 (12%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
+ S IRN +IIAH+DHGK+TL D +L+ + + + +D+ +LERERGITI ++
Sbjct: 4 KNSHIRNFSIIAHIDHGKSTLADRLLEHTGTVTKREA-QAQFLDNMELERERGITIKAQT 62
Query: 145 TSITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+ Y D ++N+IDTPGH DF EV R + EG +LVVD+ +G QT + +
Sbjct: 63 VRMKYRAKDGRDYELNLIDTPGHVDFAYEVSRSMAACEGAILVVDATQGVEAQTLANVYQ 122
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
AL+ +V V+NKID PSA + V E I L+A D A+ AS +G
Sbjct: 123 ALDHDLEIVPVINKIDLPSADVEGV-RQEIEEVIGLDAKD------AVPASAKEGIG--- 172
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
+G + E I+ +P P + D L+ + + YD ++G + + R+ G +R
Sbjct: 173 -------IGEILEQIVHRVPAPEGDPDAPLKAIVFDSWYDSYRGVVMLVRVFEGTVRPKQ 225
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG----IDDIQIGETIAD- 374
++R+ ++ + EL V+ F++ E+ AG++ V + D ++G+TI D
Sbjct: 226 KIRLWSNRKEF---EVQELGVFAPFAKAVGEL-QAGEVGVVVANVKDVHDAKVGDTITDA 281
Query: 375 -KVSGKPLPSIKVEEPTV-KMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVA 432
+ + +P P KV +P V F I + + LRD L + L N +
Sbjct: 282 ARPTEEPFPGFKVVKPMVFSGVFPIEAADY----------EQLRDALEK-LSLNDSAFTY 330
Query: 433 DGETADTFIVSGR----GTLHITILIENI 457
+ ET+ R G LH+ I+ E +
Sbjct: 331 EPETSQALGFGFRCGYLGLLHMEIVQERL 359
>sp|A1S3X9|LEPA_SHEAM Elongation factor 4 OS=Shewanella amazonensis (strain ATCC BAA-1098
/ SB2B) GN=lepA PE=3 SV=1
Length = 596
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/384 (32%), Positives = 192/384 (50%), Gaps = 47/384 (12%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D +++ D + + E+++DS DLERERGITI +++ ++
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQVCGGLTDRE-MAEQVLDSMDLERERGITIKAQSVTLD 62
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y ++N IDTPGH DF EV R L EG LLVVD+ +G QT ALE
Sbjct: 63 YTAKNGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALEM 122
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
VV V+NKID P A P+ V + E + + ATD A K G+
Sbjct: 123 DLEVVPVLNKIDLPQAEPERV-AAEIEDIVGIEATD---------AVRCSAKTGVG---- 168
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+G + E+I+ IP P + + LQ L + +D + G +++ R+ GVL+KG + +V
Sbjct: 169 ---IGEVLETIVAQIPSPEGDPEAPLQALIIDSWFDSYLGVVSLVRIKNGVLKKGDKFKV 225
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCGIDDIQ---IGE--TIADKVSG 378
++ + R+ ++ + AE+ + GI +I +G+ T+A +
Sbjct: 226 MSTGQAYNADRVG---IFTPKMKDQAELKTGQVGYVIAGIKEIHGAPVGDTLTLAKHGAD 282
Query: 379 KPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGETA 437
KPLP K +P V F+I+T + + RD L + L N A + ET+
Sbjct: 283 KPLPGFKKAKPQVYAGVFTISTDDY----------ESFRDALNK-LSLNDASLQFEPETS 331
Query: 438 DT----FIVSGRGTLHITILIENI 457
F + G LH+ I+ E +
Sbjct: 332 SALGFGFRIGYLGLLHMEIIQERL 355
>sp|B8JAF3|LEPA_ANAD2 Elongation factor 4 OS=Anaeromyxobacter dehalogenans (strain 2CP-1
/ ATCC BAA-258) GN=lepA PE=3 SV=1
Length = 601
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 49/389 (12%)
Query: 85 RRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKN 144
+ S IRN +IIAH+DHGK+TL D +L+ + + + +D+ +LERERGITI ++
Sbjct: 4 KNSHIRNFSIIAHIDHGKSTLADRLLEHTGTVTKREA-QAQFLDNMELERERGITIKAQT 62
Query: 145 TSITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKK 199
+ Y D ++N+IDTPGH DF EV R + EG +LVVD+ +G QT + +
Sbjct: 63 VRMKYRAQDGRDYELNLIDTPGHVDFAYEVSRSMAACEGAILVVDATQGVEAQTLANVYQ 122
Query: 200 ALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS 259
AL+ +V V+NKID PSA + V E I L+A D A+ AS +G
Sbjct: 123 ALDHDLEIVPVINKIDLPSADVEGV-RQEIEEVIGLDAKD------AVPASAKEGIG--- 172
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
+G + E I+ +P P + D L+ + + YD ++G + + R+ G +R
Sbjct: 173 -------IGEILEQIVHRVPAPEGDPDAPLKAIVFDSWYDSYRGVVMLVRVFEGTVRPKQ 225
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG----IDDIQIGETIAD- 374
++R+ ++ + EL V+ F++ E+ AG++ V + D ++G+TI D
Sbjct: 226 KIRLWSNRKEF---EVQELGVFAPFAKAVVEL-QAGEVGVVVANVKDVHDAKVGDTITDA 281
Query: 375 -KVSGKPLPSIKVEEPTV-KMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVA 432
+ + +P P KV +P V F I + + LRD L + L N +
Sbjct: 282 TRPTEEPFPGFKVVKPMVFSGVFPIEAADY----------EQLRDALEK-LSLNDSAFTY 330
Query: 433 DGETADTFIVSGR----GTLHITILIENI 457
+ ET+ R G LH+ I+ E +
Sbjct: 331 EPETSQALGFGFRCGYLGLLHMEIVQERL 359
>sp|A7MZB0|LEPA_VIBHB Elongation factor 4 OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=lepA PE=3 SV=1
Length = 597
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 166/314 (52%), Gaps = 33/314 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D +++ D + + ++DS DLERERGITI S++ ++
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMAAQ-VLDSMDLERERGITIKSQSVTLN 62
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 63 YTAKDGETYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEM 122
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
VV ++NKID P+A P+ V E+ A+ A+ K G+ D+
Sbjct: 123 DLEVVPILNKIDLPAADPERVAEEIEEI----------VGIDAMEATRCSAKTGIGVDD- 171
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ E+I+ IP P + D LQ L + +D + G +++ R+ G L+K +++V
Sbjct: 172 ------VLENIVSAIPAPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKV 225
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDI---QIGE--TIADKVS 377
++ + R+ +F ++ V +++ G++ VCGI DI +G+ T+A S
Sbjct: 226 MSTGQTWGVDRLG-IFTPKQ---VDTDVLRTGEVGWVVCGIKDILGAPVGDTLTLAKNGS 281
Query: 378 GKPLPSIKVEEPTV 391
KPLP K +P V
Sbjct: 282 EKPLPGFKKVKPQV 295
>sp|Q92SU3|LEPA_RHIME Elongation factor 4 OS=Rhizobium meliloti (strain 1021) GN=lepA
PE=3 SV=1
Length = 608
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 178/331 (53%), Gaps = 38/331 (11%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
S IRN +I+AH+DHGK+TL D +++ + + + E+++DS D+ERERGITI ++
Sbjct: 11 SHIRNFSIVAHIDHGKSTLADRLIQSTGGLAERE-MSEQVLDSMDIERERGITIKAQTVR 69
Query: 147 ITY--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKAL 201
+ Y ND + +N+IDTPGH DF EV R L+ EG LLVVD+ +G QT + +A+
Sbjct: 70 LHYKANDGETYVLNLIDTPGHVDFAYEVSRSLSACEGSLLVVDASQGVEAQTLANVYQAI 129
Query: 202 EFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS-P 260
+ H +V V+NKID P+A P+ I E I ++A+D A I K GL P
Sbjct: 130 DNNHELVTVLNKIDLPAAEPER-IKEQIEEVIGIDASD---------AVLISAKTGLGIP 179
Query: 261 DNLADDLGPLFESIMRCIPGPRIE--KDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKG 318
D + E+I+ +P P+ E L+ L + YD + G + + R+ G L+KG
Sbjct: 180 D--------VLEAIVHKLPAPKSEGGDTAPLKALLVDSWYDAYLGVMVLVRVIDGTLKKG 231
Query: 319 MEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIAD 374
M +R+ ++ + R+ L V+ E + G+I ++ + D ++G+TI +
Sbjct: 232 MTIRMMGTDAKYQVERVGVL----TPKMVAMEALGPGEIGFITASIKEVADTRVGDTITE 287
Query: 375 --KVSGKPLPSIKVEEPTVKMS-FSINTSPF 402
+ + K LP K +P V F ++ + F
Sbjct: 288 DKRPTAKALPGFKPAQPVVFCGLFPVDAADF 318
>sp|Q1GIV5|LEPA_RUEST Elongation factor 4 OS=Ruegeria sp. (strain TM1040) GN=lepA PE=3
SV=1
Length = 599
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 178/328 (54%), Gaps = 34/328 (10%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
S IRN +I+AH+DHGK+TL D +++ +D + +KE+++D+ D+ERERGITI +
Sbjct: 5 SKIRNFSIVAHIDHGKSTLADRLIQSTGTVQD-RDMKEQLLDAMDIERERGITIKANTVR 63
Query: 147 ITY--NDTK---INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKAL 201
I Y +D + +N+IDTPGH DF EV R + VEG LLVVDS +G QT + +A+
Sbjct: 64 IDYEADDGERYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDSTQGVEAQTLANVYQAI 123
Query: 202 EFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPD 261
+ H +V V+NKID P+A D V E I ++ATD A + K G+
Sbjct: 124 DADHEIVPVLNKIDLPAADCDRVAEQ-IEDVIGIDATD---------AIRVSAKTGIG-- 171
Query: 262 NLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEV 321
+ E+I++ +P P E++ L+ + + YD + G I + R+ GVL+KG ++
Sbjct: 172 -----IKDTLEAIVKRLPAPTGERNAPLKAMLVDSWYDAYLGVIVLVRIMDGVLKKGDQI 226
Query: 322 RVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIADKVS 377
++ + + RY + + V+ +V E+ G+I ++ + D ++G+TI
Sbjct: 227 KMMQT--NARYG-VDRIGVFRPAMQVVDEL-GPGEIGFITASIKQVRDTKVGDTITHDKK 282
Query: 378 GK--PLPSIKVEEPTVKMS-FSINTSPF 402
G LP K P V F +++S F
Sbjct: 283 GAETALPGFKPSVPVVFCGLFPVDSSEF 310
>sp|Q87LN7|LEPA_VIBPA Elongation factor 4 OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=lepA PE=3 SV=1
Length = 597
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 194/385 (50%), Gaps = 49/385 (12%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D +++ D + + ++DS DLERERGITI S++ ++
Sbjct: 4 IRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMAAQ-VLDSMDLERERGITIKSQSVTLN 62
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
Y ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 63 YTAKDGETYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEM 122
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
VV ++NKID P+A P+ V E+ + ++A D A+ K GL ++
Sbjct: 123 DLEVVPILNKIDLPAADPERVAEEIEEI-VGIDAMD---------ATRCSAKTGLGVED- 171
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ E+I+ IP P + D LQ L + +D + G +++ R+ G L+K +++V
Sbjct: 172 ------VLENIVSAIPAPEGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKV 225
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDI---QIGE--TIADKVS 377
++ + R+ +F ++ V +++ G++ VCGI DI +G+ T+A S
Sbjct: 226 MSTGQAWGVDRLG-IFTPKQ---VDTDVLNTGEVGWVVCGIKDILGAPVGDTLTLAKNGS 281
Query: 378 GKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMRVADGET 436
KPLP K +P V F +++ + N RD L + L N A + E
Sbjct: 282 DKPLPGFKKVKPQVYAGLFPVSSDDY----------ENFRDALGK-LSLNDASLFYEPEN 330
Query: 437 ADTFIVSGR----GTLHITILIENI 457
+ R G LH+ I+ E +
Sbjct: 331 SAALGFGFRCGFLGMLHMEIIQERL 355
>sp|Q1QR19|LEPA_NITHX Elongation factor 4 OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=lepA PE=3 SV=1
Length = 610
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 169/318 (53%), Gaps = 35/318 (11%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTV-KERIMDSNDLERERGITILSKNT 145
++IRN +I+AH+DHGK+TL D +++ D + KE+++DS D+ERERGITI ++
Sbjct: 14 ANIRNFSIVAHIDHGKSTLADRLIQMTGGLSDREMAGKEQVLDSMDIERERGITIKAQTV 73
Query: 146 SITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKA 200
+ Y+ D N++DTPGH DF EV R L EG LLVVD+ +G QT + +A
Sbjct: 74 RLNYHAKDGKDYIFNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYQA 133
Query: 201 LEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLS- 259
L+ H +V V+NK+D P+A PD V E I ++A+D A I K GL
Sbjct: 134 LDNNHEIVPVLNKVDLPAAEPDKV-KQQIEDVIGIDASD---------AVMISAKTGLGV 183
Query: 260 PDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGM 319
PD + E+I+ +P P+ ++D L+ L + YD + G + + R+ GV++K
Sbjct: 184 PD--------VLEAIVTRLPPPQGDRDATLKALLVDSWYDVYLGVVVLVRIVDGVMKKNS 235
Query: 320 EVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIAD- 374
+R+ + + R+ F K +V + G+I A+ + D ++G+TI D
Sbjct: 236 RIRMMGTNAAYDVERVG--FFTPKMQQVDE--LGPGEIGFITAAIKEVADTRVGDTITDD 291
Query: 375 -KVSGKPLPSIKVEEPTV 391
K + LP K P V
Sbjct: 292 RKPITEMLPGFKPAIPVV 309
>sp|Q83BK3|LEPA_COXBU Elongation factor 4 OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=lepA PE=3 SV=2
Length = 602
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 169/326 (51%), Gaps = 34/326 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D ++ + + +K +++DS D+ERERGITI +++ ++
Sbjct: 9 IRNFSIIAHIDHGKSTLADRFIQLCGGLSERE-MKAQVLDSMDIERERGITIKAQSVTLN 67
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
+ ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 68 FKSQDGHFYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQ 127
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
G V+ V+NKID P A P+ I E I + A D AI S +G+
Sbjct: 128 GLVVLPVLNKIDLPQADPERAIQE-IEDVIGIEAHD------AIRVSAKEGRG------- 173
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ L E ++ IP P + + LQ L + +D + G +++ R+ AG LRKG ++RV
Sbjct: 174 ---VKELLEQLVVAIPPPVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDKIRV 230
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDI---QIGETI--ADKVS 377
++ +I R E ++AG + V GI DI +G+T+ A + +
Sbjct: 231 MSTGKDYYADQIGHF----TPKRQPLEELSAGAVGFVVAGIKDIFGAPVGDTLTHAKQSA 286
Query: 378 GKPLPSIKVEEPTVKMS-FSINTSPF 402
G PLP K +P V F IN+ +
Sbjct: 287 GSPLPGFKQVKPQVFAGLFPINSEEY 312
>sp|A9N944|LEPA_COXBR Elongation factor 4 OS=Coxiella burnetii (strain RSA 331 /
Henzerling II) GN=lepA PE=3 SV=1
Length = 602
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 169/326 (51%), Gaps = 34/326 (10%)
Query: 89 IRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSIT 148
IRN +IIAH+DHGK+TL D ++ + + +K +++DS D+ERERGITI +++ ++
Sbjct: 9 IRNFSIIAHIDHGKSTLADRFIQLCGGLSERE-MKAQVLDSMDIERERGITIKAQSVTLN 67
Query: 149 YNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALEF 203
+ ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 68 FKSQDGHFYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQ 127
Query: 204 GHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDNL 263
G V+ V+NKID P A P+ I E I + A D AI S +G+
Sbjct: 128 GLVVLPVLNKIDLPQADPERAIQE-IEDVIGIEAHD------AIRVSAKEGRG------- 173
Query: 264 ADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVRV 323
+ L E ++ IP P + + LQ L + +D + G +++ R+ AG LRKG ++RV
Sbjct: 174 ---VKELLEQLVVAIPPPVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDKIRV 230
Query: 324 CTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDI---QIGETI--ADKVS 377
++ +I R E ++AG + V GI DI +G+T+ A + +
Sbjct: 231 MSTGKDYYADQIGHF----TPKRQPLEELSAGAVGFVVAGIKDIFGAPVGDTLTHAKQSA 286
Query: 378 GKPLPSIKVEEPTVKMS-FSINTSPF 402
G PLP K +P V F IN+ +
Sbjct: 287 GSPLPGFKQVKPQVFAGLFPINSEEY 312
>sp|Q8DM20|LEPA_THEEB Elongation factor 4 OS=Thermosynechococcus elongatus (strain BP-1)
GN=lepA PE=3 SV=1
Length = 603
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 165/316 (52%), Gaps = 33/316 (10%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
S IRN +IIAH+DHGK+TL D +L+ D + +KE+ +D+ +LERERGITI +
Sbjct: 7 SHIRNFSIIAHIDHGKSTLADRLLQLTGTV-DPREMKEQFLDNMELERERGITIKLQAAR 65
Query: 147 ITYNDTK-----INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKAL 201
+TY +N+IDTPGH DF EV R L EG LLVVD+ +G QT + AL
Sbjct: 66 MTYTSRDGETYILNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAL 125
Query: 202 EFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPD 261
E ++ V+NKID P A PD V + E I L+ + QA+ AS +G
Sbjct: 126 EHNLEIIPVLNKIDLPGAEPDRV-KAEIEEIIGLDCS------QAVLASAKEGIG----- 173
Query: 262 NLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEV 321
+ + ESI+ +P PR D L+ L + YD ++G I R+ G++R+G +
Sbjct: 174 -----IEEILESIVHLVPPPRDTVDQPLRALIFDSYYDAYRGVIVYFRVMDGIVRRGDRI 228
Query: 322 RVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETI--ADK 375
R+ S + I EL V + E + AG++ A+ + D ++G+TI A
Sbjct: 229 RLMA---SGKEYEIDELGVLAPNQK-PVESLHAGEVGYLAAAIKAVGDARVGDTITLAHN 284
Query: 376 VSGKPLPSIKVEEPTV 391
+ +PLP +P V
Sbjct: 285 PAKEPLPGYTEAKPMV 300
>sp|B8ENL1|LEPA_METSB Elongation factor 4 OS=Methylocella silvestris (strain BL2 / DSM
15510 / NCIMB 13906) GN=lepA PE=3 SV=1
Length = 601
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 34/327 (10%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
+IRN +I+AH+DHGK+TL D +++Q V E+++DS D+ERERGITI ++ +
Sbjct: 8 NIRNFSIVAHIDHGKSTLADRLIQQTGAVAARDMV-EQVLDSMDIERERGITIKAQTVRL 66
Query: 148 TYNDTK-----INIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALE 202
Y +N++DTPGH DF EV R L EG LLVVD+ +G QT + AL+
Sbjct: 67 EYKAADGEAYILNLMDTPGHVDFAYEVSRSLAACEGSLLVVDASQGVEAQTLANVYHALD 126
Query: 203 FGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDN 262
GH +V V+NKID P+A P+ I E I L+A+ +A I K G+ D
Sbjct: 127 AGHEIVPVLNKIDLPAAEPER-IKQQIEDVIGLDAS---------HAVMISAKTGVGIDL 176
Query: 263 LADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVR 322
+ E+I+ +P P+ ++ L+ L + YD + G + + R+ GVLRKG +++
Sbjct: 177 -------VLEAIVTRLPPPQGDETAPLKALLVDSWYDAYLGVVVLVRVIDGVLRKGQKIK 229
Query: 323 VCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDICAVCG----IDDIQIGETIAD--KV 376
+ ++ RI + AE ++ G+I + + D ++G+TI D +
Sbjct: 230 MMAADAHYEVDRIGVF----RPKMQDAEQLSPGEIGFITAQIKQVADTRVGDTITDERRP 285
Query: 377 SGKPLPSIKVEEPTVKMS-FSINTSPF 402
+ LP K +P V F ++ + F
Sbjct: 286 CAQALPGFKPAQPVVFCGLFPVDAADF 312
>sp|A7Z6W5|LEPA_BACA2 Elongation factor 4 OS=Bacillus amyloliquefaciens (strain FZB42)
GN=lepA PE=3 SV=1
Length = 611
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 125/396 (31%), Positives = 206/396 (52%), Gaps = 49/396 (12%)
Query: 78 EKKSRLMRRSDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERG 137
+K+ RL R+S IRN +IIAH+DHGK+TL D +L++ + +KE+++DS DLERERG
Sbjct: 3 DKEKRLERQSRIRNFSIIAHIDHGKSTLADRILEKTSAITQRE-MKEQLLDSMDLERERG 61
Query: 138 ITILSKNTSITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQ 192
ITI + + Y + ++IDTPGH DF EV R L EG +LVVD+ +G Q
Sbjct: 62 ITIKLNSVQLKYKAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQ 121
Query: 193 TRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGI 252
T + AL+ ++ V+NKID PSA P+ V E I L+A+D A+ AS
Sbjct: 122 TLANVYLALDNDLEILPVINKIDLPSAEPERV-RQEVEDVIGLDASD------AVLAS-- 172
Query: 253 QGKAGLSPDNLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHA 312
KAG+ ++ + E I+ +P P + + L+ L + YD ++G +A R+
Sbjct: 173 -AKAGIGIED-------ILEQIVEKVPAPAGDPEAPLKALIFDSLYDAYRGVVAYIRVVE 224
Query: 313 GVLRKGMEVRVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQI 368
G ++ G ++++ + + + E+ V+ ++ + E+ GD+ A+ + D ++
Sbjct: 225 GTVKPGQKIKMMA---TGKEFEVIEVGVFTPKAQPADEL-TVGDVGYLTAAIKNVGDTRV 280
Query: 369 GETI--ADKVSGKPLPSIKVEEPTVKMS-FSINTSPFVGREGKYVTSRNLRDRLYRELER 425
G+TI A K + + LP + P V + I+T+ + +LR+ L +LE
Sbjct: 281 GDTITSAVKPAAEALPGYRKLNPMVYCGLYPIDTAKY----------NDLREAL-EKLEL 329
Query: 426 NLAMRVADGETADTFIVSGR----GTLHITILIENI 457
N + + ET+ R G LH+ I+ E I
Sbjct: 330 NDSSLQYEAETSQALGFGFRCGFLGMLHMEIIQERI 365
>sp|C5BAI0|LEPA_EDWI9 Elongation factor 4 OS=Edwardsiella ictaluri (strain 93-146)
GN=lepA PE=3 SV=1
Length = 597
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/315 (34%), Positives = 169/315 (53%), Gaps = 33/315 (10%)
Query: 88 DIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTSI 147
+IRN +IIAH+DHGK+TL D +++ D + ++ +++DS DLERERGITI +++ ++
Sbjct: 3 NIRNFSIIAHIDHGKSTLSDRIIQLCGGLSDRE-MEAQVLDSMDLERERGITIKAQSVTL 61
Query: 148 TYNDT-----KINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKALE 202
Y ++N IDTPGH DF EV R L EG LLVVD+ +G QT A+E
Sbjct: 62 DYKAQDGQVYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIE 121
Query: 203 FGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPDN 262
VV V+NKID P+A PD V E + ++ATD A K G+
Sbjct: 122 MDLEVVPVLNKIDLPAADPDRVAQE-IEDIVGIDATD---------AVRCSAKTGVG--- 168
Query: 263 LADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEVR 322
+G + E ++R IP P E + LQ L + +D + G +++ R+ G LRKG +V+
Sbjct: 169 ----VGDVLERLVRDIPAPEGEPEAPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVK 224
Query: 323 VCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI-CAVCGIDDIQ---IGE--TIADKV 376
V T+ + R+ +F ++ R +++ G++ VC I DI +G+ T+A
Sbjct: 225 VMTTGQTYNADRLG-IFTPKQVDR---DVLNCGEVGWLVCAIKDIHGAPVGDTLTLARNP 280
Query: 377 SGKPLPSIKVEEPTV 391
+ LP K +P V
Sbjct: 281 ADVALPGFKKVKPQV 295
>sp|Q16BA3|LEPA_ROSDO Elongation factor 4 OS=Roseobacter denitrificans (strain ATCC 33942
/ OCh 114) GN=lepA PE=3 SV=1
Length = 599
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 34/328 (10%)
Query: 87 SDIRNIAIIAHVDHGKTTLVDAMLKQAKVFRDNQTVKERIMDSNDLERERGITILSKNTS 146
S IRN +I+AH+DHGK+TL D +++ D + +KE+++DS D+ERERGITI ++
Sbjct: 5 SHIRNFSIVAHIDHGKSTLADRLIQSTNTVAD-RDMKEQMLDSMDIERERGITIKAQTVR 63
Query: 147 ITYN-----DTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSVEGPMPQTRFVLKKAL 201
I Y + +N+IDTPGH DF EV R + VEG LLVVDS +G QT + A+
Sbjct: 64 INYTAQNGEEYVLNLIDTPGHVDFAYEVSRSMRAVEGSLLVVDSTQGVEAQTLANVYHAI 123
Query: 202 EFGHAVVVVVNKIDRPSARPDYVINSTFELFIELNATDEQCDFQAIYASGIQGKAGLSPD 261
+ H +V V+NKID P++ D V E I ++A+ AI S G+ +
Sbjct: 124 DADHEIVPVLNKIDLPASDCDRVAEQ-IEDVIGIDAS------GAIQVSAKTGQGIMET- 175
Query: 262 NLADDLGPLFESIMRCIPGPRIEKDGALQMLATNLEYDEHKGRIAIGRLHAGVLRKGMEV 321
ESI++ +P P+ ++D L+ + + YD + G I + R+ GVL+KG +
Sbjct: 176 ---------LESIVQNLPAPKGDRDAPLKAMLVDSWYDSYLGVIVLVRIMDGVLKKGDRI 226
Query: 322 RVCTSEDSCRYARISELFVYEKFSRVSAEIVAAGDI----CAVCGIDDIQIGETIADKVS 377
R+ ++ + RI + + + + G+I ++ + D ++G+TI +
Sbjct: 227 RMLSNNSTHNVDRIGVF----RPEMTAIDELGPGEIGFLTASIKQVRDTRVGDTITHEKK 282
Query: 378 GK--PLPSIKVEEPTVKMS-FSINTSPF 402
G LP K +P V F +++S F
Sbjct: 283 GTEVALPGFKPSQPVVFCGLFPVDSSEF 310
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,012,801
Number of Sequences: 539616
Number of extensions: 7668571
Number of successful extensions: 35579
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3902
Number of HSP's successfully gapped in prelim test: 842
Number of HSP's that attempted gapping in prelim test: 21073
Number of HSP's gapped (non-prelim): 6891
length of query: 512
length of database: 191,569,459
effective HSP length: 122
effective length of query: 390
effective length of database: 125,736,307
effective search space: 49037159730
effective search space used: 49037159730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)