Citrus Sinensis ID: 010400

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-

MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSWKLKSLDMEVDDSKGRTDQEKMNKEYEEFLRDLEENPELRFNISLYRNKDYQPSEMASVTDGEDVPSVPLDELLADLDLKSDDGEGDDSMRE

cccccccccccccccEEEEcccccccccccccccHHHHccccccccccccEEEEEEccccccCCcccccEEEccccHHHHHHHHHHHcccccccEEEcccEEEEcccccEEEEEEEEEEEEEccEEEEEEEEEEEEEEccccccccccccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHcccEEEEcccCEEEEccHHHHHHHHHHHHccccEEECcccEEEEcccccccEEEEEEEEEEEcccccccEEECcHHHHHHccccccEEEEEEECcEEEEEcccccEEEECccccccccccccccccccEEEEEEEEEEEEccccccccccEEEEEEEEEEEccccccccEEEEEEccccccccccccccccccccccccHHHHHccccccccEEEEEcccHHHHHHHcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHccHHHHcccccECccccccccccccccccccccccHHHHccccccccccccccccccc

***********QTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQL*SHDPKSNNFNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKK***************WKLK********************EYEEFLRDLEENPELRFNISLYRN******************SVPLDELLADLDL*************

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MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCDSCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMDQGIDFFFGNRSHAVKFVEFVGKVAPVRSRHDKQLVSHDPKSNNFNYKYTFSVEISPICREDLICLPPKVAVSLGNLGPLVICMKVTNSIALLDPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVARVSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSYEEKRLRKRSKPRSWKLKSLDMEVDDSKGxxxxxxxxxxxxxxxxxxxxxPELRFNISLYRNKDYQPSEMASVTDGEDVPSVPLDELLADLDLKSDDGEGDDSMRE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
60S ribosomal export protein NMD3	Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.	probable	Q5BLF0
60S ribosomal export protein NMD3	Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.	probable	Q99L48
60S ribosomal export protein NMD3	Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.	probable	Q5RC82

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NA7, chain A
Confidence level:probable
Coverage over the Query: 23-69
View the alignment between query and template
View the model in PyMOL

Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 397-455
View the alignment between query and template
View the model in PyMOL

Template: 2EIF, chain A
Confidence level:probable
Coverage over the Query: 243-264
View the alignment between query and template
View the model in PyMOL