Query 010403
Match_columns 511
No_of_seqs 151 out of 1341
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 06:03:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010403.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010403hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1c96_A Mitochondrial aconitase 100.0 5E-122 2E-126 1021.8 39.0 417 66-508 32-483 (753)
2 1l5j_A Aconitate hydratase 2; 100.0 3E-113 1E-117 956.3 41.8 420 52-510 365-827 (865)
3 2b3y_A Iron-responsive element 100.0 7E-115 3E-119 973.8 26.5 428 67-504 50-566 (888)
4 1pqh_A Aspartate 1-decarboxyla 32.5 5.5 0.00019 36.0 -1.5 35 372-410 37-80 (143)
5 3oug_A Aspartate 1-decarboxyla 30.9 4.9 0.00017 35.0 -2.0 35 372-410 23-66 (114)
6 2c45_A Aspartate 1-decarboxyla 24.0 6.1 0.00021 35.5 -2.8 35 372-410 20-63 (139)
7 1usm_A DCOH, hepatocyte nuclea 19.4 1.5E+02 0.0052 23.5 4.9 39 221-259 33-71 (80)
8 2d59_A Hypothetical protein PH 18.0 1.4E+02 0.0046 25.9 4.7 64 362-449 71-134 (144)
9 3jst_A Putative pterin-4-alpha 17.3 1.5E+02 0.005 24.5 4.5 40 220-259 50-89 (97)
10 2ebb_A Pterin-4-alpha-carbinol 14.7 2E+02 0.0068 24.0 4.7 39 221-259 47-85 (101)
No 1
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A
Probab=100.00 E-value=4.9e-122 Score=1021.80 Aligned_cols=417 Identities=26% Similarity=0.389 Sum_probs=382.1
Q ss_pred CCCCcHHHHHHHHhcCCCC---C-CCCCeEEEeeeEEEecCCChhHHHHHHHHHhCCCCcccCCCcEEEEecCCCCCC--
Q 010403 66 KNAMTLTEKIFSRASEKPQ---L-SPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS-- 139 (511)
Q Consensus 66 ~~~~Tl~EKIl~~~~~~~~---v-~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e~g~~~~V~~p~kv~~~~DH~vp~~-- 139 (511)
++||||+||||++|++... + ++||.+.+++|++++||+|+|+++..|+. +|. .++|+|+++ ++||++|+.
T Consensus 32 ~~~~Tl~eKIl~~H~~~~~~~~~~~~g~~i~~~~drvl~hD~T~~~a~~~l~~-~G~-~~v~~P~~~--~~DH~v~~~~~ 107 (753)
T 1c96_A 32 NRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFIS-SGL-PKVAVPSTI--HCDHLIEAQLG 107 (753)
T ss_dssp CSCCCHHHHHHHTTBSCTTTCCCCTTTCEEEECCSEEEEETTTHHHHHHHHHH-HTC-SSCSSCEEE--ECCSSCCBSSC
T ss_pred CCCCCHHHHHHHHHhCCcccccccCCCCEEEEEccEEEEeccccHHHHHHHHH-hCC-CCCCCCCce--ecCCCCCCCCC
Confidence 4789999999999997752 3 67899999999999999999999998964 774 579999874 799999987
Q ss_pred ---c-----HHHHHHHHHHHHHHHHcCcceeecccccCCcccCCCCCceeeeEecceeeeeCCceEEcCCCCCcCCCccc
Q 010403 140 ---D-----ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211 (511)
Q Consensus 140 ---~-----~~~a~~~~~~r~far~~gi~~f~d~~~~~n~~~~Ppg~GI~Hq~l~eeg~~~PG~~vvGtDSHT~t~GAlG 211 (511)
+ .+..++++++|+||+++||. || |||+|||||+++|. +++||+++||+||||||+||||
T Consensus 108 ~~~d~~~~~~~n~e~~~~l~~~a~~~gi~-~~-----------~pg~GI~Hqv~~E~-~~~Pg~~ivGtDSHT~t~GalG 174 (753)
T 1c96_A 108 GEKDLRRAKDINQEVYNFLATAGAKYGVG-FW-----------RPGSGIIHQIILEN-YAYPGVLLIGTDSHTPNGGGLG 174 (753)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTCE-EE-----------CTTSBCHHHHHHHH-TCCTTCEEEESSTTGGGGGGGT
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHCCCE-EE-----------CCCCCeeCeEeccc-ccCCCcEEecCCCCCCccchhh
Confidence 3 23447799999999999995 55 46799999998876 9999999999999999999999
Q ss_pred ceeccCchhHHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHHHHHHhhccCCCceEEEEecccccCCChhhhhh
Q 010403 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMT 291 (511)
Q Consensus 212 a~a~GvG~td~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~li~~l~~~g~~~~~vEF~G~~v~~Ls~~~R~T 291 (511)
+||||||++|++.+|+++++||++||+|+|+|+|+|++||++|||||+|+++|+++|++|++|||+||||++||+++|||
T Consensus 175 ~la~GvG~~e~~~vmagq~~~~~~P~vv~V~l~G~L~~gVtakDviL~ii~~l~~~G~~g~~vEf~G~gv~~LS~~~R~T 254 (753)
T 1c96_A 175 GICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMAT 254 (753)
T ss_dssp CEEEECCHHHHHHHHHTCCEEEECCEEEEEEEESCCCTTCCHHHHHHHHHHHHTTTTTTTEEEEEESGGGGGSCHHHHHH
T ss_pred hheeccCHHHHHHHHhCCeeeccCCcEEEEEEeeecCCCccHHHHHHHHHHHhccCCcceEEEEEECCccccCCcchhhh
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccCceeecccCchhHHHHhhhcCCC--------CCccccCCCCCeecEEEEEECCCceeeeecCCCcccccccc
Q 010403 292 LCNMVVEAGGKNGVVPADGTTFKYLEDKTSL--------PYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAR 363 (511)
Q Consensus 292 l~NMa~E~GA~~~i~~~D~~t~~yl~~r~~~--------~~~~l~~D~dA~Y~~~i~iDls~leP~VA~P~~Pdnv~~v~ 363 (511)
||||++|+||++|+||+|++|++||+.+++. .|+.|++|+||.|+++++||||+|||+||+|++|||+.+++
T Consensus 255 I~NMa~E~GA~~gifp~De~T~~YL~~~gr~~~~~~~~~y~~~l~~D~~A~Yd~~ieiDls~leP~va~P~~P~~~~~v~ 334 (753)
T 1c96_A 255 ICNMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADEFKDHLVPDPGCHYDQVIEINLSELKPHINGPFTPDLAHPVA 334 (753)
T ss_dssp HHHHGGGGTCSEEECCCCHHHHHHHHHTTCHHHHHHHHHTGGGSSCCTTCCCSEEEEEEGGGCCCEEECSSSTTCEEEHH
T ss_pred hhccchhhCcccccccCcHHHHHHHHhcCCcHHHHHHHHHHhhccCCCCCceeEEEEEEccccceeecCCCCCcceeEhH
Confidence 9999999999999999999999999998872 34678899999999999999999999999999999999999
Q ss_pred cccce--------eeeeEEEecCCCCChHHHHHHHHHHHh---cCCcceeeEEEecCcHHHHHHHhcCCCCCCCCchHHH
Q 010403 364 ECKDV--------KIDRVYIGSCTGGKTEDFLAAAKVFLA---SGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQ 432 (511)
Q Consensus 364 e~~~~--------~Id~a~IGSCTngr~eDl~~AA~iL~~---~G~kv~v~~~V~PaS~~V~~~a~~~g~~g~~~~g~~~ 432 (511)
|+.+. +||+||||||||+|+|||++||+|||+ +|++.+|+++|+|+|++|+.++.++| +++
T Consensus 335 e~~~~~~~~~~~~~Vd~~~IGSCTN~~~~Dl~~AA~ilkga~~~~v~~~V~~~v~PgS~~V~~~~~~~G--------l~~ 406 (753)
T 1c96_A 335 EVGSVAEKEGWPLDIRVGLIGSCTNSSYEDMGRSAAVAKQALAHGLKCKSQFTITPGSEQIRATIERDG--------YAQ 406 (753)
T ss_dssp HHHHHHHHHTCCCBEEEEEEBTTTBCSHHHHHHHHHHHHHHHTTTCCCSSEEEECCSBHHHHHHHHHTT--------HHH
T ss_pred HhhhhHhhcCCccceEEEEEecCCCCCHHHHHHHHHHhccHhhcCCCCCceEEEeCCCHHHHHHHHHcC--------cHH
Confidence 99988 999999999999999999999999996 55556699999999999999999964 899
Q ss_pred HHHHcCccccCCCCCccccCCCCCcccCCCCCcEEEEecCCCCCCCC-CCCCCcEEecCHHHHHHHHHcCCCC-Cccc
Q 010403 433 IFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRM-GHKEGQIYLASPYTAAASALTGYVT-DPRE 508 (511)
Q Consensus 433 ~f~~AGa~i~~~pgCg~C~G~~~~~~g~l~~gev~vsT~NRNF~GRm-G~~~a~iyLASP~tvAAsAl~G~It-dpr~ 508 (511)
+|++|||.| .+||||+|+|++.+..+..+++++||||+||||+||| |++++++|||||++||||||+|+|+ ||+.
T Consensus 407 ~l~~aG~~i-~~~gCg~CiG~~~~~~~~~~~~~~~vsT~NRNF~GR~gG~p~~~~yLaSP~~vaA~AiaG~i~~d~~~ 483 (753)
T 1c96_A 407 VLRDVGGIV-LANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFTGRNDANPETHAFVTSPEIVTALAIAGTLKFNPET 483 (753)
T ss_dssp HHHHTTEEE-CCSSCGGGGTCBCCCSSCTTCCEEEEESSSCCCTTTTTSCTTEEEEECCHHHHHHHHHHCBTTCCTTT
T ss_pred HHHHcCcEE-ecCCceeeecCCCCcccccCCcceEEecccCCcccccCCCCCCceeecCHHHHHHHHHcCCcccCccc
Confidence 999999999 6999999999976533345667789999999999999 5888999999999999999999999 7763
No 2
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1
Probab=100.00 E-value=3e-113 Score=956.29 Aligned_cols=420 Identities=23% Similarity=0.337 Sum_probs=382.3
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCeEEEeeeEEEecCCChhHHHHHHHHHhCCCCcccCCCcEEEE
Q 010403 52 PQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVII 131 (511)
Q Consensus 52 ~~~~~r~~~~~~~~~~~~Tl~EKIl~~~~~~~~v~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e~g~~~~V~~p~kv~~~ 131 (511)
|..--|.|......+|||||+||||++|+|.+.|+|||+|++++|++++||+|+|++++.|++ +| ..+|++++++.+
T Consensus 365 ~~~~f~~~~~~~~~~mg~TlaEKIl~~~~g~~~v~~G~~v~~~~D~v~~qD~Tg~~~~~~~~~-lg--~~~~~~d~vv~~ 441 (865)
T 1l5j_A 365 HSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKD-LA--CLGFSADLVMQS 441 (865)
T ss_dssp CCCSSCCCCCCCCCCSCCCHHHHHHHHTTTSSCCCTTCEECCBCSEEEECTTTHHHHHHHHHH-TT--CCSCCSSCEEEC
T ss_pred chhhccCCCCCCCCCCCccHHHHHHHHHhCCCccCCCCEEEEEeeEEEEeccCcHHHHHHHHH-cC--CCcCCCCeEEEE
Confidence 334446666666678999999999999999888999999999999999999999999999964 77 368999999999
Q ss_pred ecCCCCCCcHHHHHHHHHHHHHHHHcCcceeecccccCCcccCCCCCceeeeEecceeeeeCCceEEcCCCCCcCCCccc
Q 010403 132 PDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211 (511)
Q Consensus 132 ~DH~vp~~~~~~a~~~~~~r~far~~gi~~f~d~~~~~n~~~~Ppg~GI~Hq~l~eeg~~~PG~~vvGtDSHT~t~GAlG 211 (511)
+||.++.++....++++.+++|++++++. || |||+|||||+++| ++.||+++||+||||||+|+
T Consensus 442 ~dh~~~~~~~~~~e~~~~~~~Fa~~~g~~-~~-----------~pg~GI~Hq~l~~--~~~PG~~ivGtDSHT~~~~G-- 505 (865)
T 1l5j_A 442 FCHTAAYPKPVDVNTHHTLPDFIMNRGGV-SL-----------RPGDGVIHSWLNR--MLLPDTVGTGGDSHTRFPIG-- 505 (865)
T ss_dssp CCSSSSSCCHHHHHHHHHHHHHHHTTTCE-EC-----------CTTSBCHHHHHGG--GCCTTCEEEESSTTCCCSSS--
T ss_pred CCCCCcCCCHHHHHHHHHHHHHHHHcCCe-Ee-----------CCCCceeeeeecc--cccccceEEeCCCCcccccc--
Confidence 99999999999999999999999999984 44 5789999998764 99999999999999999995
Q ss_pred ceeccCchhHHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHHHHH------Hhhc------cCCCceEEEEecc
Q 010403 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIG------EISV------AGATYKSMEFVGT 279 (511)
Q Consensus 212 a~a~GvG~td~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~li~------~l~~------~g~~~~~vEF~G~ 279 (511)
+|+|.|++|++.+|+||++|+++||+|+|+|+|+|++||++|||||+|++ .|++ ++++|++||| +
T Consensus 506 -lg~g~G~g~vA~a~atG~~~~~vPevv~V~l~G~L~~gVtaKDvIL~i~~~~i~~G~l~v~k~g~~~~~~G~~vEf--~ 582 (865)
T 1l5j_A 506 -ISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEI--E 582 (865)
T ss_dssp -EECCCCHHHHHHHHHHSBCCEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHTTSBCSCSTTCCBTTTTSEEEE--E
T ss_pred -ceeCccHHHHHHHHHcCceeecCCCEEEEEEEeeCCCCCChHHHHHHHHHHHHhcccccccccCcccceeeEEEEE--c
Confidence 56788999999999999999999999999999999999999999999953 4444 5678999999 5
Q ss_pred cccCCChhhhhhhhhcccccCceeecccCc-hhHHHHhhh----------cCCC-------------C----CccccCCC
Q 010403 280 TVERLSMEERMTLCNMVVEAGGKNGVVPAD-GTTFKYLED----------KTSL-------------P----YEPVYSDE 331 (511)
Q Consensus 280 ~v~~Ls~~~R~Tl~NMa~E~GA~~~i~~~D-~~t~~yl~~----------r~~~-------------~----~~~l~~D~ 331 (511)
||++||+++|||||||++|+||++|+||+| ++|++||+. +++. + +..|++|+
T Consensus 583 Gv~~LS~~~R~TI~NMa~E~GA~~g~f~~dDe~t~~YL~~~~~~~~~m~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~D~ 662 (865)
T 1l5j_A 583 GLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADA 662 (865)
T ss_dssp SCTTCCHHHHHHHHHGGGTTTCSEEEECCCHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHSCCCCCCCT
T ss_pred ccccCChhhhhhHhhcchhcCCeeEEEeCCHHHHHHHHHhhhhhhhhhhccCCccchhHHHHHHHHHHHHhccceeccCC
Confidence 799999999999999999999999999966 888999997 3431 1 23478999
Q ss_pred CCeecEEEEEECCCc-eeeeecCCCcccccccccccceeeeeEEEecCCCCChHHHHHHHHHHHhcCCcce--eeEEEec
Q 010403 332 KASFLSEYRFDISKL-EPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVP 408 (511)
Q Consensus 332 dA~Y~~~i~iDls~l-eP~VA~P~~Pdnv~~v~e~~~~~Id~a~IGSCTngr~eDl~~AA~iL~~~G~kv~--v~~~V~P 408 (511)
||.|+++++||||+| ||+||+|++|||+.+++++++++||+||||||||+ +|||++||+||| |++++ |+++|+|
T Consensus 663 dA~Y~~~ieiDLs~l~eP~VA~P~~Pd~~~~vse~~~~~Id~v~IGSCTtn-~eDl~~AA~ilk--g~~v~~~v~~~V~P 739 (865)
T 1l5j_A 663 DAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTN-IGHFRAAGKLLD--AHKGQLPTRLWVAP 739 (865)
T ss_dssp TCCCSEEEEEEGGGCCSCEEECTTCTTCEEEGGGTTTCBCCEEEECSTTCC-HHHHHHHHHHHH--HSCSCCSSEEEECC
T ss_pred CCcEEEEEEEEcccCCCCEecCCCChHhccchhhhcccccceEEEecCCCC-HHHHHHHHHHHc--CcccCCCCCEEEEC
Confidence 999999999999999 89999999999999999999999999999999888 999999999999 55565 9999999
Q ss_pred CcHHHHHHHhcCCCCCCCCchHHHHHHHcCccccCCCCCccccCCCCCcccCCCCCcEEEEecCCCCCCCCCCCCCcEEe
Q 010403 409 ATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYARMNEPMVCVSTTNRNFPGRMGHKEGQIYL 488 (511)
Q Consensus 409 aS~~V~~~a~~~g~~g~~~~g~~~~f~~AGa~i~~~pgCg~C~G~~~~~~g~l~~gev~vsT~NRNF~GRmG~~~a~iyL 488 (511)
+|++|+.++.++| ++++|++|||.+ .+||||+|+|++ +++++|++|+||+||||+|||| +++++||
T Consensus 740 gS~~V~~~l~~eG--------l~~~l~~aGa~v-~~pgCg~CiGn~----~~~~~ge~~isTsNRNF~GR~G-~~~~~yL 805 (865)
T 1l5j_A 740 PTRMDAAQLTEEG--------YYSVFGKSGARI-EIPGCSLCMGNQ----ARVADGATVVSTSTRNFPNRLG-TGANVFL 805 (865)
T ss_dssp SBHHHHHHHHHTT--------HHHHHHHHTCEE-CCSSCGGGTCSS----SCCCTTCEEEESSSCCCTTSSS-TTCEEEE
T ss_pred CCHHHHHHHHHcC--------cHHHHHHcCCEE-cCCccccccCcC----CcCCCCCEEEecCCcCCCCCCC-CCcceEE
Confidence 9999999999964 899999999999 699999999985 4788999999999999999999 6899999
Q ss_pred cCHHHHHHHHHcCCCCCccccc
Q 010403 489 ASPYTAAASALTGYVTDPREFL 510 (511)
Q Consensus 489 ASP~tvAAsAl~G~Itdpr~~~ 510 (511)
|||++||||||+|+|+|||+|+
T Consensus 806 aSP~~vAAsAiaG~i~~p~e~~ 827 (865)
T 1l5j_A 806 ASAELAAVAALIGKLPTPEEYQ 827 (865)
T ss_dssp CCHHHHHHHHHHSBCCCHHHHH
T ss_pred CCHHHHHHHHhCCcCCCHHHHH
Confidence 9999999999999999999874
No 3
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A
Probab=100.00 E-value=7.4e-115 Score=973.77 Aligned_cols=428 Identities=21% Similarity=0.315 Sum_probs=381.0
Q ss_pred CCCcHHHHHHHHhcCC-CCCCCCCeEEEeeeEEEecCCChhHHHHHHHHH------hCCCCcccCCC-cEEEEecCCCCC
Q 010403 67 NAMTLTEKIFSRASEK-PQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKE------FGENAKVWDRE-KIVIIPDHYIFT 138 (511)
Q Consensus 67 ~~~Tl~EKIl~~~~~~-~~v~~Gd~v~v~vD~v~~hD~tgp~~~~~~~~e------~g~~~~V~~p~-kv~~~~DH~vp~ 138 (511)
.|.|++||++.++++- +..++|++|.+++|++++||+|+|+++..|+.. +|.++...+|. ++.+++||++|+
T Consensus 50 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~~pdrvl~qD~Tg~~a~~~l~~mr~a~~~~g~d~~ki~p~~pv~lv~DH~v~~ 129 (888)
T 2b3y_A 50 DEFLVKKQDIENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQV 129 (888)
T ss_dssp CSSSSCHHHHHHHHTHHHHTTTTCEEEECCSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCCC
T ss_pred CCcchhHHHHHHHhcccccCCCCCEEEEeccEEEEEccccHHHHHHHHHHHHHHHhcCCChhhcCCCCCeeEEeCCCCCc
Confidence 5889999999998853 335789999999999999999999999887532 25444445676 489999999998
Q ss_pred CcHH--HHHHHHHHHHHHHHcCccee--ecccccCCcccCCCCCceeeeEecc---------eeeeeCCceEEcCCCCCc
Q 010403 139 SDER--ANRNVDILRDFCMEQNIKYF--YDIKDLGNFKANPDYKGVCHIALAQ---------EGHCRPGEVLLGTDSHTC 205 (511)
Q Consensus 139 ~~~~--~a~~~~~~r~far~~gi~~f--~d~~~~~n~~~~Ppg~GI~Hq~l~e---------eg~~~PG~~vvGtDSHT~ 205 (511)
.+.. .+..++.+++|.|+.+++.| |....+.||++.|||+|||||+++| +|++.|| +|||||||||
T Consensus 130 ~~~~~~da~~~n~~~e~~rN~e~~~fL~w~~~~f~~~~~~~pG~GI~Hqv~lE~la~~v~~~~G~~~P~-tlVGtDSHT~ 208 (888)
T 2b3y_A 130 DFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPD-SLVGTDSHTT 208 (888)
T ss_dssp SSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEEC-EEEESSGGGG
T ss_pred CCccccCHHHHHHHHHHHHhcchHHHHHHHHHhccCCCCCCCCCCCcceehhhhccccccccCcccccC-eEEecCCCcc
Confidence 7633 45666778899999988777 7777788999999999999999888 8999995 8999999999
Q ss_pred CCCcccceeccCchhHHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHHHHHHhhccCCCceEEEEecccccCCC
Q 010403 206 TAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLS 285 (511)
Q Consensus 206 t~GAlGa~a~GvG~td~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~li~~l~~~g~~~~~vEF~G~~v~~Ls 285 (511)
|+||||+||||||++|++++|+||++||++||+|+|+|+|+|++||++|||||+|+++|+++|++||+|||+|||+++||
T Consensus 209 t~GglG~la~GVGg~eae~~mag~~~~~~~PevvgV~ltG~L~~gVtakDviL~i~~~l~~~G~vGk~vEF~G~gv~~LS 288 (888)
T 2b3y_A 209 MIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQLS 288 (888)
T ss_dssp GGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTSC
T ss_pred ccCcceeEEEccCHHHHHHHHhcCcEeecCCCEEEEEEEccCCCCcchhHHHHHHHHHhccCCccceEEEEecCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccCceeecccCchhHHHHhhhcCCCC--------C-------ccccCC-CCCeecEEEEEECCCceee
Q 010403 286 MEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSLP--------Y-------EPVYSD-EKASFLSEYRFDISKLEPL 349 (511)
Q Consensus 286 ~~~R~Tl~NMa~E~GA~~~i~~~D~~t~~yl~~r~~~~--------~-------~~l~~D-~dA~Y~~~i~iDls~leP~ 349 (511)
+++|||||||++|+||++|+||+|++|++||+.+++.+ | +.+.+| ++|.|+++++||||+|||+
T Consensus 289 ~~~R~TI~NMa~E~GAt~g~fp~De~T~~YL~~~gr~~~~~~~~e~y~~a~~l~~~l~~d~~dA~Yd~~ieiDLs~leP~ 368 (888)
T 2b3y_A 289 IADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRDEEKLKYIKKYLQAVGMFRDFNDPSQDPDFTQVVELDLKTVVPC 368 (888)
T ss_dssp HHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCCHHHHHHHHHHHHHHTCCCCTTCGGGCCCCSEEEEEEGGGCCSE
T ss_pred ccchhhhhhcchhhCCeeEEecCcHHHHHHHHhcCCchHHHHHHHHHHHHHHHHhccCCCCCCCceEEEEEEEhhheeEe
Confidence 99999999999999999999999999999999987743 2 122235 8999999999999999999
Q ss_pred eecCCCccccccccccc--------------ce-------------------------eeeeEEEecCCCCChHHHHHHH
Q 010403 350 VAKPHSPDNRALARECK--------------DV-------------------------KIDRVYIGSCTGGKTEDFLAAA 390 (511)
Q Consensus 350 VA~P~~Pdnv~~v~e~~--------------~~-------------------------~Id~a~IGSCTngr~eDl~~AA 390 (511)
||+|++|||+.+++++. |. +|++||||||||+|+||+++||
T Consensus 369 VAgP~~P~~~~plse~~~~~~~~l~~~~g~~g~~~~~~~~~~~~~~~~~g~~~~l~~g~V~~a~IgSCTN~s~~dl~~aA 448 (888)
T 2b3y_A 369 CSGPKRPQDKVAVSDMKKDFESCLGAKQGFKGFQVAPEHHNDHKTFIYDNTEFTLAHGSVVIAAITSCTNTSNPSVMLGA 448 (888)
T ss_dssp EECSSCTTCEEEGGGHHHHHHHHHHSCSBTTBCCCCGGGTTCEEEEEETTEEEEEETTBEEEEEECCHHHHTCHHHHHHH
T ss_pred ecCCCCcccccChHHhhhhHHHhhhcccccccccccchhhcccceeecCCccccccCCcEEEEEEecCCCCCcHHHHHHH
Confidence 99999999999998764 11 4889999999999999999999
Q ss_pred HHHHh----cCCcce--eeEEEecCcHHHHHHHhcCCCCCCCCchHHHHHHHcCccccCCCCCccccCCCCCcccC----
Q 010403 391 KVFLA----SGKKVK--VPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDTPASPSCGACLGGPKDTYAR---- 460 (511)
Q Consensus 391 ~iL~~----~G~kv~--v~~~V~PaS~~V~~~a~~~g~~g~~~~g~~~~f~~AGa~i~~~pgCg~C~G~~~~~~g~---- 460 (511)
+||++ +|+||+ |+++|+|+|+.|+.++.++| ++++|++|||.| .+||||+|+|++++..+.
T Consensus 449 ~lLak~A~~kG~kv~p~Vk~~v~PGS~~V~~~l~~~G--------l~~~l~~aGf~i-~~~GC~~CiG~~~~l~~~~~~~ 519 (888)
T 2b3y_A 449 GLLAKKAVDAGLNVMPYIKTSLSPGSGVVTYYLQESG--------VMPYLSQLGFDV-VGYGCMTCIGNSGPLPEPVVEA 519 (888)
T ss_dssp HHHHHHHHHTTCCCCTTSEEEECCSSHHHHHHHHHTS--------CHHHHHHTTCCB-CCSSCGGGGTCCCCCCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCceEEEeCCCHHHHHHHHHcC--------cHHHHHHcCCEE-eCCCCcceeCCCCCCCchhhhh
Confidence 99943 499998 99999999999999999975 799999999999 699999999997543211
Q ss_pred CCCCc---EEEEecCCCCCCCCCCCCCcEEecCHHHHHHHHHcCCCC
Q 010403 461 MNEPM---VCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGYVT 504 (511)
Q Consensus 461 l~~ge---v~vsT~NRNF~GRmG~~~a~iyLASP~tvAAsAl~G~It 504 (511)
+.+|| ++|||+||||+||||+..+.+|||||++||||||+|+|+
T Consensus 520 i~~ge~~~~~vsS~NRNFeGR~g~~~~~~yLaSP~lvaA~AiaG~i~ 566 (888)
T 2b3y_A 520 ITQGDLVAVGVLSGNRNFEGRVHPNTRANYLASPPLVIAYAIAGTIR 566 (888)
T ss_dssp HHHHTCCCEEEESSSCCCTTSSCTTCSEEEECCHHHHHHHHHHCBSC
T ss_pred hccCCeeEEEEeccCCCcCcCCCCCccccEecCHHHHHHHHhcCeee
Confidence 12266 569999999999999988899999999999999999998
No 4
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=32.50 E-value=5.5 Score=35.97 Aligned_cols=35 Identities=29% Similarity=0.545 Sum_probs=27.6
Q ss_pred eEEEecCCCCChHHHHHHHHHHHhcCCcce---------eeEEEecCc
Q 010403 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVK---------VPTFLVPAT 410 (511)
Q Consensus 372 ~a~IGSCTngr~eDl~~AA~iL~~~G~kv~---------v~~~V~PaS 410 (511)
.=|.||||=- +||+.||.||. +-||. ..++++|+-
T Consensus 37 L~Y~GSITID--~dLldaAgIl~--~EkV~IvNvnNG~RfeTYvI~Ge 80 (143)
T 1pqh_A 37 LHYEGTCAID--QDFLDAAGILE--NEAIDIWNVTNGKRFSTYAIAAE 80 (143)
T ss_dssp SSSCCCEEEE--HHHHHHHTCCT--TCEEEEEETTTCCEEEEEEEEEC
T ss_pred cccceeEEEC--HHHHHHcCCCC--CCEEEEEECCCCceEEEEEEEcc
Confidence 3488999975 89999999999 77774 347788744
No 5
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=30.90 E-value=4.9 Score=35.02 Aligned_cols=35 Identities=23% Similarity=0.463 Sum_probs=26.4
Q ss_pred eEEEecCCCCChHHHHHHHHHHHhcCCcce---------eeEEEecCc
Q 010403 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVK---------VPTFLVPAT 410 (511)
Q Consensus 372 ~a~IGSCTngr~eDl~~AA~iL~~~G~kv~---------v~~~V~PaS 410 (511)
.=|.||||=- +||+.||.||. +-||. ..++++|+-
T Consensus 23 L~Y~GSitID--~~Ll~aA~i~~--~E~V~I~NvnNG~Rf~TYvI~Ge 66 (114)
T 3oug_A 23 LFYVGSITID--SEIMKQANIIE--NEKVQVVNLNNGERLETYVIKGE 66 (114)
T ss_dssp SSCC-CEEEE--HHHHHHTTCCT--TBEEEEEETTTCCEEEEEEEEEC
T ss_pred ccccceEEEC--HHHHHHcCCCc--CCEEEEEECCCCceEEEEEEEcc
Confidence 3489999975 89999999999 77774 347788744
No 6
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=23.99 E-value=6.1 Score=35.53 Aligned_cols=35 Identities=29% Similarity=0.495 Sum_probs=27.2
Q ss_pred eEEEecCCCCChHHHHHHHHHHHhcCCcce---------eeEEEecCc
Q 010403 372 RVYIGSCTGGKTEDFLAAAKVFLASGKKVK---------VPTFLVPAT 410 (511)
Q Consensus 372 ~a~IGSCTngr~eDl~~AA~iL~~~G~kv~---------v~~~V~PaS 410 (511)
.=|.||||=- +||+.||.||. +-||. ..++++|+-
T Consensus 20 L~Y~GSITID--~dLldaAgIl~--~EkV~IvNvnNG~RfeTYvI~Ge 63 (139)
T 2c45_A 20 LHYVGSVTID--ADLMDAADLLE--GEQVTIVDIDNGARLVTYAITGE 63 (139)
T ss_dssp SSSCCEEEEE--HHHHHHTTCCS--SCCEEEEETTTCCEEEECEEEEC
T ss_pred cccceeeEEC--HHHHHHcCCCC--CCEEEEEECCCCceEEEEEEEcc
Confidence 3488999975 89999999999 77775 346777744
No 7
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=19.44 E-value=1.5e+02 Score=23.52 Aligned_cols=39 Identities=8% Similarity=-0.227 Sum_probs=32.5
Q ss_pred HHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHH
Q 010403 221 DAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (511)
Q Consensus 221 d~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~ 259 (511)
+++-.+---+-|.-....|.|+|.-.=..|++.+|++|+
T Consensus 33 ~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA 71 (80)
T 1usm_A 33 ALAERENHHPRLTVEWGRVTVEWWTHSAGGVTEKDREMA 71 (80)
T ss_dssp HHHHHHTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 455555667788889999999998887889999999987
No 8
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=17.97 E-value=1.4e+02 Score=25.95 Aligned_cols=64 Identities=19% Similarity=0.188 Sum_probs=37.0
Q ss_pred cccccceeeeeEEEecCCCCChHHHHHHHHHHHhcCCcceeeEEEecCcHHHHHHHhcCCCCCCCCchHHHHHHHcCccc
Q 010403 362 ARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVPGSGGKTCSQIFEEAGCDT 441 (511)
Q Consensus 362 v~e~~~~~Id~a~IGSCTngr~eDl~~AA~iL~~~G~kv~v~~~V~PaS~~V~~~a~~~g~~g~~~~g~~~~f~~AGa~i 441 (511)
++|+.. ++|.|+| |+.. +....+++-+.++|.+ .+++.+++. ..-+.+...++|..+
T Consensus 71 l~~l~~-~vDlvvi--~vp~--~~~~~vv~~~~~~gi~---~i~~~~g~~---------------~~~l~~~a~~~Gi~v 127 (144)
T 2d59_A 71 VLDIPD-KIEVVDL--FVKP--KLTMEYVEQAIKKGAK---VVWFQYNTY---------------NREASKKADEAGLII 127 (144)
T ss_dssp GGGCSS-CCSEEEE--CSCH--HHHHHHHHHHHHHTCS---EEEECTTCC---------------CHHHHHHHHHTTCEE
T ss_pred HHHcCC-CCCEEEE--EeCH--HHHHHHHHHHHHcCCC---EEEECCCch---------------HHHHHHHHHHcCCEE
Confidence 445443 6999998 4544 3333333323333543 235666553 012678899999998
Q ss_pred cCCCCCcc
Q 010403 442 PASPSCGA 449 (511)
Q Consensus 442 ~~~pgCg~ 449 (511)
++|.|-.
T Consensus 128 -vGpnc~g 134 (144)
T 2d59_A 128 -VANRCMM 134 (144)
T ss_dssp -EESCCHH
T ss_pred -EcCCchh
Confidence 6888643
No 9
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=17.28 E-value=1.5e+02 Score=24.52 Aligned_cols=40 Identities=8% Similarity=-0.043 Sum_probs=34.2
Q ss_pred hHHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHH
Q 010403 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (511)
Q Consensus 220 td~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~ 259 (511)
.+++-.+---+-|..+...|.|+|+=.=..|+|.+|++|+
T Consensus 50 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlT~~D~~lA 89 (97)
T 3jst_A 50 ALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMA 89 (97)
T ss_dssp HHHHHHHTCCCEEEEETTEEEEEECBGGGTBCCHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 3566667777888999999999998888889999999986
No 10
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=14.69 E-value=2e+02 Score=23.96 Aligned_cols=39 Identities=10% Similarity=-0.129 Sum_probs=33.1
Q ss_pred HHHHHHhcceEEeecCCeeeEEEEeeCCCCCcHHHHHHH
Q 010403 221 DAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (511)
Q Consensus 221 d~a~~l~tg~~~lkvPetv~V~l~G~l~~gV~aKDviL~ 259 (511)
+++-.+---+-|.-....|.|+|.-.=..|++.+|++|+
T Consensus 47 ~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA 85 (101)
T 2ebb_A 47 AISENANHHPFISIDYKLITVKLSSWRAKGLTKLDFDLA 85 (101)
T ss_dssp HHHHHTTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 455556667888889999999998888889999999987
Done!