BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010413
(511 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CGC7|SYEP_MOUSE Bifunctional glutamate/proline--tRNA ligase OS=Mus musculus GN=Eprs
PE=1 SV=4
Length = 1512
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 286/504 (56%), Positives = 368/504 (73%), Gaps = 15/504 (2%)
Query: 23 KKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEI 82
KK+T LGL KK+EN EWYS+V+ EMIEYYD+SGCYI+RPW+ SIWE+++ FFDAEI
Sbjct: 1009 KKQTRLGLEAKKEENLAEWYSQVITKSEMIEYYDVSGCYILRPWSYSIWESIKDFFDAEI 1068
Query: 83 KKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYP 142
KK+ ++NCYFP+FVS L+KEK+HIE FAPEVAWVT+SG+++L PIAIRPTSETVMYP
Sbjct: 1069 KKLGVENCYFPIFVSQAALEKEKNHIEDFAPEVAWVTRSGKTELAEPIAIRPTSETVMYP 1128
Query: 143 YYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQ 202
Y+KW++ HRDLP++LNQWCNVVRWEF +P PF+R+REFLWQEGH+AFAT EA DEVLQ
Sbjct: 1129 AYAKWVQSHRDLPVRLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATFEEAADEVLQ 1188
Query: 203 ILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNF 262
ILELY R+YEE LA+PV++G+K+E EKFAGG YTTT+EAFI +GR IQGATSH LGQNF
Sbjct: 1189 ILELYARVYEELLAIPVVRGRKTEKEKFAGGDYTTTIEAFISASGRAIQGATSHHLGQNF 1248
Query: 263 SKMFEIIFENEK--GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVP 320
SKM EI+FE+ K GEK A+Q SW TTRTIGVMVMVHGD+ GLVLPPRVASVQV+V+P
Sbjct: 1249 SKMCEIVFEDPKTPGEKQFAYQCSWGLTTRTIGVMVMVHGDNMGLVLPPRVASVQVVVIP 1308
Query: 321 VPYKDA----DTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIE 376
+A D + + C L A I +D RDNYSPGWK++HWE+KGVP+R+E
Sbjct: 1309 CGITNALSEEDREALMAKCNEYRRRLLGANIRVRVDLRDNYSPGWKFNHWELKGVPVRLE 1368
Query: 377 IGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVK 436
+GP+D+ Q AVRRD G K+ + +++++L++IQ +LF A + + +
Sbjct: 1369 VGPRDMKSCQFVAVRRDTGEKLTIAEKEAEAKLEKVLEDIQLNLFTRASEDLKTHMVVSN 1428
Query: 437 TWDEFVEALGQRKMILAPWCDEEEVE---KDVKARTKG-EMGA----AKTLCSPLEQP-E 487
T ++F + L K+ P+C E + E K + AR + E GA AK+LC P E
Sbjct: 1429 TLEDFQKVLDAGKVAQIPFCGEIDCEDWIKKMTARDQDVEPGAPSMGAKSLCIPFNPLCE 1488
Query: 488 IPEGTLCFASGKPAKRWSYWGRSY 511
+ G +C PAK ++ +GRSY
Sbjct: 1489 LQPGAMCVCGKNPAKFYTLFGRSY 1512
>sp|O60155|YHY6_SCHPO Putative proline--tRNA ligase C19C7.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC19C7.06 PE=3 SV=1
Length = 716
Score = 587 bits (1514), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/513 (56%), Positives = 359/513 (69%), Gaps = 30/513 (5%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
+G++ +KD +F WY +V+ +MIEYYDISGCYI++PW+ SIWE +Q +FD EIKK+ +
Sbjct: 205 IGITVRKDADFPNWYQQVLTKSDMIEYYDISGCYILKPWSYSIWEAIQGWFDKEIKKLGV 264
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
+N YFPLFVS VL+KEKDH+EGFAPEVAWVT++G S+L+ PIAIRPTSETVMYPYY+KW
Sbjct: 265 RNGYFPLFVSSKVLEKEKDHVEGFAPEVAWVTRAGTSELDEPIAIRPTSETVMYPYYAKW 324
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
IR HRDLPLKLNQW +VVRWEF NP PF+R+REFLWQEGHTA T A +EV QIL+LY
Sbjct: 325 IRSHRDLPLKLNQWNSVVRWEFKNPQPFLRTREFLWQEGHTAHMTLEGATEEVHQILDLY 384
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
RIY + LAVPVIKG KSE EKFAGG++TTTVE +IP TGRGIQGATSHCLGQNFSKMF
Sbjct: 385 ARIYTDLLAVPVIKGVKSENEKFAGGMFTTTVEGYIPTTGRGIQGATSHCLGQNFSKMFN 444
Query: 268 IIFENEKGE--------KAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVV 319
I+ E+ E K WQNSW +TRTIGV VMVHGDDKGL LPP +A VQ +VV
Sbjct: 445 IVVEDPNAEIGPTGERPKLFVWQNSWGLSTRTIGVAVMVHGDDKGLKLPPAIALVQSVVV 504
Query: 320 PV----PYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRI 375
P D + I C+ + L A I D R Y+PG+K+SHWEMKGVPLR+
Sbjct: 505 PCGITNKTTDQERNEIEGFCSKLADRLNAADIRTEADLR-AYTPGYKFSHWEMKGVPLRL 563
Query: 376 EIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIV 435
E GP D KNQV AVRRD K+ +P ++L + + +LL +IQ +++ AK RDA + V
Sbjct: 564 EYGPNDAKKNQVTAVRRDTFEKIPVPLNNLEKGVSDLLAKIQTNMYETAKAERDAHVVKV 623
Query: 436 KTWDEFVEALGQRKMILAPWCDEEEVEKDVKARTKGEMG------------AAKTLCSPL 483
K W +FV AL ++ +++ PWC+ E EK++K + ++ AK+LC PL
Sbjct: 624 KEWADFVPALNKKNIVMIPWCNTTECEKEIKKNSARQVNGDEPEDEKAPSMGAKSLCIPL 683
Query: 484 EQPE----IPEGTL-CFASGKPAKRWSYWGRSY 511
EQP I EGT C G AK W +GRSY
Sbjct: 684 EQPSGEDAIIEGTTKCAGCGNLAKVWGLFGRSY 716
>sp|P07814|SYEP_HUMAN Bifunctional glutamate/proline--tRNA ligase OS=Homo sapiens GN=EPRS
PE=1 SV=5
Length = 1512
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/504 (55%), Positives = 363/504 (72%), Gaps = 15/504 (2%)
Query: 23 KKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEI 82
KK+T LGL KK+EN +WYS+V+ EMIEY+DISGCYI+RPWA +IWE ++ FFDAEI
Sbjct: 1009 KKQTRLGLEAKKEENLADWYSQVITKSEMIEYHDISGCYILRPWAYAIWEAIKDFFDAEI 1068
Query: 83 KKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYP 142
KK+ ++NCYFP+FVS + L+KEK H+ FAPEVAWVT+SG+++L PIAIRPTSETVMYP
Sbjct: 1069 KKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRPTSETVMYP 1128
Query: 143 YYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQ 202
Y+KW++ HRDLP+KLNQWCNVVRWEF +P PF+R+REFLWQEGH+AFAT EA +EVLQ
Sbjct: 1129 AYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQ 1188
Query: 203 ILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNF 262
IL+LY ++YEE LA+PV+KG+K+E EKFAGG YTTT+EAFI +GR IQG TSH LGQNF
Sbjct: 1189 ILDLYAQVYEELLAIPVVKGRKTEKEKFAGGDYTTTIEAFISASGRAIQGGTSHHLGQNF 1248
Query: 263 SKMFEIIFENEK--GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVP 320
SKMFEI+FE+ K GEK A+QNSW TTRTIGVM MVHGD+ GLVLPPRVA VQV+++P
Sbjct: 1249 SKMFEIVFEDPKIPGEKQFAYQNSWGLTTRTIGVMTMVHGDNMGLVLPPRVACVQVVIIP 1308
Query: 321 VPYKDA----DTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIE 376
+A D + + C L I D RDNYSPGWK++HWE+KGVP+R+E
Sbjct: 1309 CGITNALSEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLE 1368
Query: 377 IGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVK 436
+GP+D+ Q AVRRD G K+ + + +++ +L++IQ +LF A + + +
Sbjct: 1369 VGPRDMKSCQFVAVRRDTGEKLTVAENEAETKLQAILEDIQVTLFTRASEDLKTHMVVAN 1428
Query: 437 TWDEFVEALGQRKMILAPWCDEEEVE---KDVKARTKG-EMGA----AKTLCSPLEQP-E 487
T ++F + L K++ P+C E + E K AR + E GA AK+LC P + E
Sbjct: 1429 TMEDFQKILDSGKIVQIPFCGEIDCEDWIKKTTARDQDLEPGAPSMGAKSLCIPFKPLCE 1488
Query: 488 IPEGTLCFASGKPAKRWSYWGRSY 511
+ G C PAK ++ +GRSY
Sbjct: 1489 LQPGAKCVCGKNPAKYYTLFGRSY 1512
>sp|P28668|SYEP_DROME Bifunctional glutamate/proline--tRNA ligase OS=Drosophila
melanogaster GN=Aats-glupro PE=1 SV=2
Length = 1714
Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/523 (54%), Positives = 370/523 (70%), Gaps = 23/523 (4%)
Query: 6 EKKSKANATGGGKKKEVKKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRP 65
+K+ A+A+G VKK+T LGL K++N +WYS+V+ GEMIEYYD+SGCYI+R
Sbjct: 1198 KKEPAADASGA-----VKKQTRLGLEATKEDNLPDWYSQVITKGEMIEYYDVSGCYILRQ 1252
Query: 66 WAMSIWETMQKFFDAEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESD 125
W+ +IW+ ++ +FDAEI +M ++ CYFP+FVS VL+KEK HI FAPEVAWVTKSG+SD
Sbjct: 1253 WSFAIWKAIKTWFDAEITRMGVKECYFPIFVSKAVLEKEKTHIADFAPEVAWVTKSGDSD 1312
Query: 126 LEVPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQE 185
L PIA+RPTSETVMYP Y+KW++ +RDLP++LNQW NVVRWEF PTPF+R+REFLWQE
Sbjct: 1313 LAEPIAVRPTSETVMYPAYAKWVQSYRDLPIRLNQWNNVVRWEFKQPTPFLRTREFLWQE 1372
Query: 186 GHTAFATKSEADDEVLQILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPN 245
GHTAFA K EA EVL IL+LY +Y LA+PV+KG+K+E EKFAGG YTTTVEAFI
Sbjct: 1373 GHTAFADKEEAAKEVLDILDLYALVYTHLLAIPVVKGRKTEKEKFAGGDYTTTVEAFISA 1432
Query: 246 TGRGIQGATSHCLGQNFSKMFEIIFEN-EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKG 304
+GR IQGATSH LGQNFSKMFEI++E+ E +K +QNSW TTRTIGVM+MVH D++G
Sbjct: 1433 SGRAIQGATSHHLGQNFSKMFEIVYEDPETQQKKYVYQNSWGITTRTIGVMIMVHADNQG 1492
Query: 305 LVLPPRVASVQVIVVP----VPYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPG 360
LVLPP VA +Q IVVP V KD + + DAC A + L G+ D RDNYSPG
Sbjct: 1493 LVLPPHVACIQAIVVPCGITVNTKDDERAQLLDACKALEKRLVGGGVRCEGDYRDNYSPG 1552
Query: 361 WKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESL 420
WK++HWE+KGVPLR+E+GPKDL Q+ AVRRD K+ +P + + ++I LL+ I ES+
Sbjct: 1553 WKFNHWELKGVPLRLEVGPKDLKAQQLVAVRRDTVEKITIPLADVEKKIPALLETIHESM 1612
Query: 421 FVAAKQRRDACIQIVKTWDEFVEALGQRKMILAPWCDEEEVEKDVKART----KGEMGA- 475
A++ + + V W +F L Q+ ++LAP+C E E +KA + + E GA
Sbjct: 1613 LNKAQEDMTSHTKKVTNWTDFCGFLEQKNILLAPFCGEISCEDKIKADSARGEEAEPGAP 1672
Query: 476 ---AKTLCSPLEQPE-IPEGTLCF---ASGKPAKRWSYWGRSY 511
AK+LC P +QP I C + KP K ++ +GRSY
Sbjct: 1673 AMGAKSLCIPFDQPAPIAASDKCINPSCTNKP-KFYTLFGRSY 1714
>sp|Q8I5R7|SYP_PLAF7 Proline--tRNA ligase OS=Plasmodium falciparum (isolate 3D7)
GN=proRS PE=1 SV=1
Length = 746
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 274/500 (54%), Positives = 353/500 (70%), Gaps = 11/500 (2%)
Query: 23 KKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEI 82
K LG++ KK ENF +WY++V+V E+IEYYDISGCYI+RP A IWE +Q FF+ EI
Sbjct: 247 KDSNILGITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEI 306
Query: 83 KKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYP 142
KK+ ++N YFPLFV+ L+KEK+HIEGF+PEVAWVTK G+S+L IAIRPTSET+MY
Sbjct: 307 KKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYS 366
Query: 143 YYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQ 202
+ KWIR +RDLPLKLNQW VVRWEF PTPFIR+REFLWQEGHTA + EA V
Sbjct: 367 VFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFD 426
Query: 203 ILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNF 262
IL+LYRR YEE+LAVP+IKG KSE EKF G +T+T EAFI GR IQ ATSH LG NF
Sbjct: 427 ILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNF 486
Query: 263 SKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVP 322
+KMF+I FE+E K Q SW TTR+IG+M+M HGDDKGLVLPP V+ +V++VP+
Sbjct: 487 AKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIF 546
Query: 323 YKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDL 382
YK D I C + L A I D R +YSPG+K++HWE++G+P+RIE+GPKDL
Sbjct: 547 YKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDL 606
Query: 383 AKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFV 442
N VRRDN K ++ + S++ +++L +I ++LF+ AK++ D I V ++ E +
Sbjct: 607 QNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQVTSFSEVM 666
Query: 443 EALGQRKMILAPWCD----EEEVEKDVK----ARTKGEM---GAAKTLCSPLEQPEIPEG 491
AL ++KM+LAPWC+ EEE++K+ + +T E GA K LC PL+QP +P
Sbjct: 667 NALNKKKMVLAPWCEDIATEEEIKKETQRLSLNQTNSETTLSGAMKPLCIPLDQPPMPPN 726
Query: 492 TLCFASGKPAKRWSYWGRSY 511
CF SGKPAKRW +GRSY
Sbjct: 727 MKCFWSGKPAKRWCLFGRSY 746
>sp|P38708|YHI0_YEAST Putative proline--tRNA ligase YHR020W OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YHR020W PE=1 SV=1
Length = 688
Score = 557 bits (1435), Expect = e-158, Method: Compositional matrix adjust.
Identities = 268/504 (53%), Positives = 351/504 (69%), Gaps = 20/504 (3%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
+G++ K +F WY +++ GEM++YYD+SGCYI+RP + +IWE +QK+FD +IK + +
Sbjct: 185 IGITVDKALDFPGWYQQILTKGEMLDYYDVSGCYILRPPSYAIWENIQKWFDDKIKAIGV 244
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
QN YFP+FVS VL+KEKDH+EGFAPEVAWVT++G S+LE PIAIRPTSETVMYPYY+KW
Sbjct: 245 QNAYFPMFVSSRVLEKEKDHVEGFAPEVAWVTRAGSSELEEPIAIRPTSETVMYPYYAKW 304
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
++ +RDLPLKLNQW +VVRWEF +P PF+R+REFLWQEGHTA T +A++EVLQIL+ Y
Sbjct: 305 VQSYRDLPLKLNQWNSVVRWEFKHPQPFLRTREFLWQEGHTAHLTAKDAEEEVLQILDFY 364
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
+YEE LAVPV+KG+K+E EKFAGG +TTT E +IP TGRGIQGATSH LGQNFSKMF
Sbjct: 365 AGVYEELLAVPVVKGRKTEKEKFAGGDFTTTCEGYIPQTGRGIQGATSHHLGQNFSKMFN 424
Query: 268 IIFENEKGE---KAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPV--- 321
+ EN G K A+QNSW +TR IGVMVM+H D+KGLV+PPRV+ Q +V+PV
Sbjct: 425 LSVENPLGSDHPKIFAYQNSWGLSTRVIGVMVMIHSDNKGLVIPPRVSQFQSVVIPVGIT 484
Query: 322 -PYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPK 380
+ + I + + L + GI A D DNY+PGWK+S +E+KG+P+RIE+GPK
Sbjct: 485 KKTSEEQRKHIHETARSVESRLKKVGIRAFGDYNDNYTPGWKFSQYELKGIPIRIELGPK 544
Query: 381 DLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDE 440
D+ KNQV VRR++ K + L RI E+L+E+Q LF AK+ D IV W
Sbjct: 545 DIEKNQVVVVRRNDSKKYVVSFDELEARIPEILEEMQGDLFKKAKELFDTHRVIVNEWSG 604
Query: 441 FVEALGQRKMILAPWCDEEEVEKDVKART-------------KGEMGAAKTLCSPLEQPE 487
FV AL ++ +ILAPWC E E+D+K + K AK+LC P +QP
Sbjct: 605 FVPALNKKNVILAPWCGVMECEEDIKESSAKKDDGEEFEEDDKAPSMGAKSLCIPFDQPV 664
Query: 488 IPEGTLCFASGKPAKRWSYWGRSY 511
+ EG C + A + +GRSY
Sbjct: 665 LNEGQKCIKCERIAVNYCMFGRSY 688
>sp|Q8SSD7|SYP_ENCCU Proline--tRNA ligase OS=Encephalitozoon cuniculi (strain GB-M1)
GN=ECU02_1360 PE=1 SV=1
Length = 520
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 238/497 (47%), Positives = 337/497 (67%), Gaps = 14/497 (2%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
GL+ KK+E+F EWY +V+ GEMI+YY I GCY++RP +W+ + K+F +I+++ +
Sbjct: 25 FGLTAKKEEDFSEWYVQVITKGEMIDYYAIKGCYVMRPLGQFVWKCIHKWFTKKIEELGV 84
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
Q CYFP+ V ++L+ EKDH+E F+PEVAW+TK G LE P+A+RPTSET++YP +SKW
Sbjct: 85 QECYFPMLVPKSMLEMEKDHVENFSPEVAWITKCGNQVLEDPVAVRPTSETIIYPSFSKW 144
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
IR HRDLPLKLNQWC+V+RWE PFIR +EFLWQEGHTAF T+ E+D+EVL IL+LY
Sbjct: 145 IRSHRDLPLKLNQWCSVLRWELHGTLPFIRGKEFLWQEGHTAFLTRKESDEEVLAILDLY 204
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
+IY E LAVPVIKG+KSE EKF G YTT++EAFIP +GRG+Q ATSH LGQNFS+MF+
Sbjct: 205 SQIYSELLAVPVIKGRKSENEKFGGADYTTSIEAFIPGSGRGVQAATSHSLGQNFSRMFD 264
Query: 268 IIFENEKGEK--AMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKD 325
I + ++G + + +QNSW TTR+IG+ M+H D+ GLVLPPRVA QV++VP
Sbjct: 265 IKADTDEGSESSSFVYQNSWGITTRSIGIAAMIHSDNLGLVLPPRVAMTQVVIVPCGITT 324
Query: 326 ADTQGIFDACTATVETLC----EAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKD 381
A ++ ++ A + +C +G+ ++D R N + G+K++HWE++GVPLR+EIG KD
Sbjct: 325 ASSKDDTESLRAYINGVCVQLKNSGVRVHLDDRSNVTAGFKFNHWEIRGVPLRLEIGFKD 384
Query: 382 LAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEF 441
+A ++ VRRD AK + + + E +D + + A RD+ I VK+++EF
Sbjct: 385 MASSEACLVRRDTRAKKQVSVEGIAHTVMEEIDTMHNDMLARATSERDSRISYVKSFEEF 444
Query: 442 VEALGQRKMILAPWCDEEEVEKDVKAR-TKGE------MGAAKTLCSPLEQPEIPEGTLC 494
+ AL + +I+APWC E E ++K+R T+ + AKTLC P +G C
Sbjct: 445 MSALDNKNIIMAPWCGISECEIEIKSRSTRADPRSDVVSTGAKTLCIPYGSKPC-DGMKC 503
Query: 495 FASGKPAKRWSYWGRSY 511
A ++ +GRSY
Sbjct: 504 INCNSQAVHYTLFGRSY 520
>sp|A0Q2I3|SYP_CLONN Proline--tRNA ligase OS=Clostridium novyi (strain NT) GN=proS PE=3
SV=1
Length = 478
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/478 (44%), Positives = 294/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+++Y + GC IIRP+ +IWE +QK+ D + K+ +N Y P+
Sbjct: 15 DEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDTKFKETGHENVYMPM 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ ++LQKEKDH+EGFAPEVAWVT+ G L + +RPTSET+ +Y+K I+ H DL
Sbjct: 75 FIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQSHNDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P K NQWC+VVRWE PF+R+ EFLWQEGHTA AT E+ E + +L +Y E
Sbjct: 135 PKKYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTAHATAEESAKETIDMLNVYANFCENV 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFSK F I + ++
Sbjct: 194 LAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQSGTSHNFGDNFSKAFNIQYNDKN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
+ Q SW TTR IG ++MVHGDD GL LPPR+A +QV++VP+ +G+ D
Sbjct: 253 SQLQYVHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIVPIA---QHKEGVLDK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
+ + + +DS D PGWK++ +EMKGVP+R+E+GPKD+ NQV VRRD
Sbjct: 310 AEELRQRIAKVAR-VKVDSSDKM-PGWKFNEYEMKGVPVRLEVGPKDIENNQVVLVRRDT 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K+ + L +I ELLDEI S+ A+ RD KT DEF E + I A
Sbjct: 368 REKIFVSMDELETKIPELLDEIHNSMLEHARTHRDEHTYTAKTLDEFKEIADTKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E+ +K E+ + C P EQ EI + +C GK AK YWG++Y
Sbjct: 428 MWCGDTACEEKLK-----EVAGVSSRCMPFEQEEITDKCIC--CGKEAKHMVYWGKAY 478
>sp|A8MLB3|SYP_ALKOO Proline--tRNA ligase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=proS PE=3 SV=1
Length = 480
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/476 (43%), Positives = 291/476 (61%), Gaps = 14/476 (2%)
Query: 37 NFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPLFV 96
+F +WY++V+ ++++Y + G +I+P+ +IWE +Q + D K+ +NCYFPL +
Sbjct: 18 DFAQWYTDVIKKTDLVDYSPVKGFMVIKPYGYAIWENIQNYMDKRFKETGHKNCYFPLLI 77
Query: 97 SPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDLPL 156
++L+KE +H+EGFAPEVAWVT G +L + +RPTSET++ YSKW+ +RDLP
Sbjct: 78 PESLLKKEAEHVEGFAPEVAWVTHGGNEELAERLCVRPTSETIICEMYSKWLTSYRDLPF 137
Query: 157 KLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEFLA 216
NQWC+VVRWE S PF+R+ EFLWQEGHT T EA E LQ+L +YR E LA
Sbjct: 138 LYNQWCSVVRWEKST-RPFLRTSEFLWQEGHTLHETYEEAQAETLQMLNIYRETAENLLA 196
Query: 217 VPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKGE 276
+PV+ G+KSE EKFAG T T+EA + + G+ +Q TSH LGQ+F+ F+I + + GE
Sbjct: 197 MPVVIGQKSEKEKFAGAYATYTMEALM-HDGKALQAGTSHNLGQHFTTAFDITYSDRNGE 255
Query: 277 KAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDACT 336
+ SW +TR IG ++MVHGD++GLVLPP +A QV++VPV + +G+ D
Sbjct: 256 LKHPYHTSWGVSTRLIGGIIMVHGDNRGLVLPPGIAPTQVVIVPVA---SHKEGVLDKAN 312
Query: 337 ATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNGA 396
+ L + +D RDNYSPGWK++ WEMKGVP+RIEIGP+D+ NQ RRD
Sbjct: 313 ELRDRLKDK-FRVELDDRDNYSPGWKFNEWEMKGVPIRIEIGPRDIENNQAMLFRRDELE 371
Query: 397 KVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILAPW 455
K + L E +++LL++I +L AK RD IVKT+DE E + + + A W
Sbjct: 372 KDAVSLDDLEEAVEKLLEDINNNLLYKAKMMRDEKTYIVKTFDEMKEVMEIKPGFVKAMW 431
Query: 456 CDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
C E E+ VKA T C P EQ + G C GK AK Y ++Y
Sbjct: 432 CGERACEEHVKAET-----GVTIRCIPFEQENL--GHTCAFCGKEAKHMVYLAKAY 480
>sp|B8I5R4|SYP_CLOCE Proline--tRNA ligase OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=proS PE=3 SV=1
Length = 478
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/478 (43%), Positives = 295/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
+++FG+WY++V+ E+++Y + GC +I+P+ +IWE +QK D K+ +N Y P+
Sbjct: 15 NDDFGQWYTDVIKKAELVDYSSVRGCMVIKPYGYAIWENIQKSLDTRFKETGHENVYMPM 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ ++L KEK+H+EGFAPEVAWVT G+ L + +RPTSET+ +YS I+ +RDL
Sbjct: 75 FIPESLLLKEKEHVEGFAPEVAWVTHGGDEKLTERLCVRPTSETLFCEHYSNSIQSYRDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHTA AT EA +E +++L +Y + E
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTLEFLWQEGHTAHATAEEAQEETIRMLNVYADVLENV 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PVIKG+K+E EKFAG T TVE+ + + G+ +Q TSH G F+K F+I + ++
Sbjct: 194 LAIPVIKGRKTEKEKFAGAHATYTVESLM-HDGKALQSGTSHNFGDGFAKAFDIQYTDKN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
+ Q SW TTR IG ++MVHGDD GLVLPP +A Q++++PV +G+ +
Sbjct: 253 NQLQYVHQTSWGVTTRLIGAIIMVHGDDSGLVLPPAIAPTQLVIIPV---SQHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
+ L A MD D PGWK+S +EMKGVPLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 ANELKQKL-SAKFRVKMDDSDKM-PGWKFSEYEMKGVPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K+ + +L E + L ++Q+SL A++ RD I T +EF + + +
Sbjct: 368 REKIFVSLDNLEETVVNTLADVQKSLLEKARELRDKKTYIAATLEEFDQIINSTPGFVKG 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC E E E VK +T A C PLEQ ++ + +C GKPAK YWG++Y
Sbjct: 428 MWCGERECEDLVKEKT-----GATARCMPLEQEQLSDKCMC--CGKPAKSMVYWGKAY 478
>sp|B1L224|SYP_CLOBM Proline--tRNA ligase OS=Clostridium botulinum (strain Loch Maree /
Type A3) GN=proS PE=3 SV=1
Length = 478
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/478 (43%), Positives = 295/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP +IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK+E EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTEKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGDD GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ A++ RD + T +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDTIHNSMLEEARKARDEKTYVATTMEEFEDIIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLIYWGRAY 478
>sp|Q9L4Q8|SYP_CLOSD Proline--tRNA ligase OS=Clostridium sticklandii (strain ATCC 12662
/ DSM 519 / JCM 1433 / NCIB 10654) GN=proS PE=1 SV=1
Length = 481
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/483 (42%), Positives = 290/483 (60%), Gaps = 23/483 (4%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY++V+ ++++Y + G +I+P+ +IWE +Q F D K+ QNCYFPL
Sbjct: 16 DEDFPQWYTDVITKTDLVDYSPVKGFMVIKPYGYAIWENIQAFLDRRFKETGHQNCYFPL 75
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
+ ++L KEK+H+EGFAPEVAWVT G L + +RPTSET++ YSKW+ +R+L
Sbjct: 76 LIPESLLNKEKEHVEGFAPEVAWVTHGGSEKLAERLCVRPTSETIICSMYSKWLTSYREL 135
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE S PF+R+ EFLWQEGHT T EA E LQ+L +Y+ + E+
Sbjct: 136 PYLYNQWCSVVRWEKST-RPFLRTSEFLWQEGHTLHETAEEAQAETLQMLAIYKEMAEDL 194
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ G+KS+ E+FAG T T+EA + + G+ +Q TSH L Q+F+K F+I F+
Sbjct: 195 LAIPVVDGRKSDRERFAGAAATYTIEALM-HDGKALQSGTSHNLAQHFTKAFDITFQGRT 253
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
GE SW +TR IG ++MVHGD++GLVLPPRVA QV+++P+ + +G+ D
Sbjct: 254 GELEYPHHTSWGASTRLIGGIIMVHGDNRGLVLPPRVAPTQVVIIPIA---QNKEGVLDK 310
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
+ L GI +D NYSPGWK++ +EMKGVPLR+EIGP+D+ N RRD
Sbjct: 311 AYEIKKELEAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARRDT 370
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAP 454
+K ++ + +K LLD + + A+ RD+ K ++EF +RKMI P
Sbjct: 371 LSKDSYSLDNIGDTVKNLLDTVHTDMLERARAHRDSKTFTFKDYEEF-----KRKMIETP 425
Query: 455 ------WCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWG 508
WC EEE E +K T C P Q + G C GKPAK Y
Sbjct: 426 GFAKGMWCGEEECEAKIKEDT-----GVTIRCIPFVQENL--GETCQFCGKPAKHMVYLA 478
Query: 509 RSY 511
++Y
Sbjct: 479 KAY 481
>sp|C3KUV8|SYP_CLOB6 Proline--tRNA ligase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=proS PE=3 SV=1
Length = 478
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/478 (43%), Positives = 295/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP +IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK+E EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTEKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGDD GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AKELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ A++ RD + T +EF + + + I A
Sbjct: 368 REKTIVSLDEIEVKVQEMLDIIHNSMLEEARKSRDEKTYVAITMEEFEDIIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|Q18CD7|SYP2_CLOD6 Proline--tRNA ligase 2 OS=Clostridium difficile (strain 630)
GN=proS2 PE=3 SV=1
Length = 481
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/480 (42%), Positives = 298/480 (62%), Gaps = 13/480 (2%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +++F +WY++V+ ++++Y + G +++P+ ++WE MQ+F D + K+ +NCYF
Sbjct: 14 KMEDDFPQWYTDVITKTDLVDYAPVKGFMVVKPYGYALWEKMQEFMDKKFKETGHKNCYF 73
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
PL + ++L KE +H+EGFAPEVAWVT G LE + +RPTSET++ Y+KW++ +R
Sbjct: 74 PLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEERLCVRPTSETIICTMYAKWLKSYR 133
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
+LP NQWC+VVRWE S PF+R+ EFLWQEGHT T EA +E +Q LE+Y+ + E
Sbjct: 134 ELPYLYNQWCSVVRWEKST-RPFLRTSEFLWQEGHTLHETAEEAQEETIQQLEVYKALCE 192
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
E LA+PV+ G+KSE EKFAGG T T+EA + + G+ +Q TSH LGQ+F+K F+I F +
Sbjct: 193 ELLAMPVVAGQKSESEKFAGGERTYTIEAMM-HDGKALQSGTSHFLGQHFTKAFDITFAD 251
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
+G A + SW +TR IG ++M H D++GLVLPPRVA +QV++VP+ K +
Sbjct: 252 REGNLANPYHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPIAAKKGNVMETV 311
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
D A ++ G+ +D RDNY+ GWK++ WEMKGVP+R+EIGPKD+ NQ RR
Sbjct: 312 DKIYADLKA---KGVAVEVDDRDNYTTGWKFNEWEMKGVPVRVEIGPKDIENNQAMVFRR 368
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K +P L + I +L D I +F A++ R+ IV+ DEF +AL ++ I
Sbjct: 369 DTLEKDSMPLEGLADAICDLFDVIHNDMFEKARKHREDNTSIVENMDEFRKALEEKPGFI 428
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E E +K T A C P EQ + G C GK A ++Y
Sbjct: 429 KTMWCGDAECEAKIKEET-----GATIRCLPFEQENL--GHKCVYCGKEADSMVVMAKAY 481
>sp|B1IFI2|SYP_CLOBK Proline--tRNA ligase OS=Clostridium botulinum (strain Okra / Type
B1) GN=proS PE=3 SV=1
Length = 478
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 295/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP +IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGD+ GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AEELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ AK+ RD + +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC ++ E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDKACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|C1FM10|SYP_CLOBJ Proline--tRNA ligase OS=Clostridium botulinum (strain Kyoto / Type
A2) GN=proS PE=3 SV=1
Length = 478
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 294/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP +IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGD+ GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ AK+ RD + +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|A7GIT0|SYP_CLOBL Proline--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=proS PE=3 SV=1
Length = 478
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 294/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP +IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGD+ GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AEELKERLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ AK+ RD + +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|A5I768|SYP_CLOBH Proline--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=proS PE=3 SV=1
Length = 478
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 293/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGD+ GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ AK+ RD + +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|A7FYU0|SYP_CLOB1 Proline--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=proS PE=3 SV=1
Length = 478
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/478 (43%), Positives = 293/478 (61%), Gaps = 15/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY+++V E+ +Y I GC IIRP IWE +QK+ D ++K+ +N P+
Sbjct: 15 DEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENVSMPI 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ +LQKEKDH+EGFAPEVAWVT G+ +L + +RPTSET+ +Y+K ++ ++DL
Sbjct: 75 FIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQSYKDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHT TK EA+ L+IL +Y R+ E+
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLCEDM 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+PV+ GKK++ EKFAG T T+E+ + + G+ +Q TSH LGQNFSK F I F +
Sbjct: 194 LAMPVVMGKKTDKEKFAGADDTYTIESLM-HDGKALQAGTSHYLGQNFSKAFAIQFSDRN 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ +WA TTR IG ++MVHGD+ GL LPPR+A Q +++PV +G+ +
Sbjct: 253 GKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPVA---QHKEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L + + +D D PGWKYS +EMKG+PLRIEIGPKD+ KNQ VRRDN
Sbjct: 310 AKELKEKLAKV-VRVKLDDSDKM-PGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRRDN 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +++E+LD I S+ AK+ RD + +EF + + + I A
Sbjct: 368 REKTIVSLDEIEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIENKPGFIKA 427
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E ++ E+ A + C P EQ + + +C GK AK YWGR+Y
Sbjct: 428 MWCGDRACEDKIR-----EVTGATSRCMPFEQEVVSDTCVC--CGKKAKNLVYWGRAY 478
>sp|Q81IE9|SYP2_BACCR Proline--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=proS2 PE=3 SV=1
Length = 476
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 297/480 (61%), Gaps = 15/480 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K+ +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKETGHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + +RPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW +TR IG ++MVH D+ GLVLPP+VA VQV++VP+
Sbjct: 249 RNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVLPPKVAPVQVVIVPIAQHKEGVLAKA 308
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
A ++ + I A+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 309 TELQAHIQKVARVKIDAS-----NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K +P L ERI LL+EI +LF AK RD + ++E + +++ I
Sbjct: 364 DTKEKEFVPMDQLEERIPALLEEIHIALFNKAKAFRDENTYVATNFEEMKKIADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC E E+ +K E G + + C P EQ + E +C GK AK+ YWG++Y
Sbjct: 424 KAMWCGELACEEKLKE----EFGVS-SRCMPFEQEHLAEECIC--CGKEAKQMVYWGKAY 476
>sp|B3ER64|SYP_AMOA5 Proline--tRNA ligase OS=Amoebophilus asiaticus (strain 5a2) GN=proS
PE=3 SV=1
Length = 491
Score = 409 bits (1052), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/493 (41%), Positives = 297/493 (60%), Gaps = 24/493 (4%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ ENF EWY+E++ E+ E + GC IRP+ +IWE MQ D K +N YFP
Sbjct: 8 RAENFSEWYNEIIKRAELAENAAVRGCMTIRPYGFAIWEKMQAILDKAFKATGHENAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVT----KSGE----------SDLEVPIAIRPTSETV 139
+F+ + L +E H+EGFA E A VT K+ E + LE + +RPTSET+
Sbjct: 68 IFIPKSYLNREAAHVEGFAKECAVVTHYRLKATEDGQQVVVDPSAKLEEELIVRPTSETI 127
Query: 140 MYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDE 199
++ Y WI+ +RDLPL +NQWCNVVRWE F+R+ EFLWQEGHTA AT++EA+ E
Sbjct: 128 IWNSYKNWIQSYRDLPLLINQWCNVVRWEMRTRL-FLRTAEFLWQEGHTAHATQAEAEQE 186
Query: 200 VLQILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLG 259
LQ+L +Y +++LA+P +KG K+E E+FAG T T+EA + + G+ +Q TSH LG
Sbjct: 187 ALQMLNIYADFGKDYLAIPFLKGIKTEHERFAGAEETYTIEALMQD-GKALQAGTSHFLG 245
Query: 260 QNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVV 319
Q F+K FE+ F N+ G+ W SW TTR IG +VM H DDKGLVLPPRVA +Q++++
Sbjct: 246 QRFAKAFEVTFTNQAGQLDYVWGTSWGLTTRLIGALVMTHSDDKGLVLPPRVAPIQIVII 305
Query: 320 PVPYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGP 379
P+ + + I + L I A +D RD + PGWK++ +E+KGVP+R+ IGP
Sbjct: 306 PIYRTQEEKEAIQQQAQHIQQQLIAHNISAKLDGRDEHKPGWKFAEYELKGVPIRMAIGP 365
Query: 380 KDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWD 439
DLA N V RRD K +P +++ +K +LD I ++L+ A + R+ V +++
Sbjct: 366 NDLANNTVELTRRDTSEKTTVPTDNIIVVVKSMLDSIHDNLYQRAYEFREQNTYQVNSYE 425
Query: 440 EFVEALGQRK-MILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASG 498
EF A+ Q++ ILA W +E E+ + A TK A C PLE P +C +G
Sbjct: 426 EFKTAISQKRGFILAHWDGTKETERQIHAETK-----ATIRCIPLEVNTEP--GVCIYTG 478
Query: 499 KPAKRWSYWGRSY 511
KP+K+ +G++Y
Sbjct: 479 KPSKQRVVFGQAY 491
>sp|B9LUM0|SYP_HALLT Proline--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC 49239
/ DSM 5036 / JCM 8891 / ACAM 34) GN=proS PE=3 SV=1
Length = 491
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/491 (41%), Positives = 304/491 (61%), Gaps = 14/491 (2%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEY--YDISGCYIIRPWAMSIWETMQKFFDAEIKKM 85
LG++ K N GEWY+EVV + +Y +SG + RP A ++WE +Q F DA+ K
Sbjct: 8 LGITESKSHNTGEWYAEVVQKAGLADYGPEGMSGFIVTRPRAYAVWERLQGFLDAKFKDT 67
Query: 86 KIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYS 145
+QN YFPLF+ + L++EKD +EGF PEVAWVT++G +LE +A+RPTSE+++ PY S
Sbjct: 68 GVQNAYFPLFIPESYLEREKDIVEGFDPEVAWVTEAGNKELEERLAVRPTSESIITPYIS 127
Query: 146 KWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILE 205
+W+R HRDLPL++NQWC+VVRWE + PF R++EFLWQEGHTA AT A +E + L+
Sbjct: 128 QWVRSHRDLPLRVNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHATHEGAWEETMTRLD 187
Query: 206 LYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKM 265
Y +YE+ LA+PV+KG+K + +KF G TTTVEA +P+ G+ +Q TSH LGQ+F++
Sbjct: 188 QYASVYEDLLAMPVLKGQKPDHDKFPGAETTTTVEALMPD-GKSVQAGTSHHLGQSFAEA 246
Query: 266 FEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKD 325
F+I F +E E+ +A SW + R +G ++M H D++GLVLPP VA QV+VVP+ +D
Sbjct: 247 FDITFSDEDEEERIAHTTSWGLSWRALGALIMTHSDEQGLVLPPGVAPEQVVVVPIWQED 306
Query: 326 ADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKN 385
+ + + + L +AGI +D RD +PG+K++ E+ GVPLRIEIGP ++
Sbjct: 307 TKDE-VLEYAEGVADDLDDAGIRVELDDRDGRNPGFKFNEHELNGVPLRIEIGPHEVEDG 365
Query: 386 QVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEAL 445
++ V R +G V R +V +++ DE+ L+ A++ D ++ + + L
Sbjct: 366 ELTLVHRPDGESVVEDREGVVATVQDHFDEVYAKLYATAEETLDGAVREADDRADILGTL 425
Query: 446 GQR-KMILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQ----PEIPEGTLCFASGKP 500
GQ + APWC +E E+ +K E AA+ + P E E G C
Sbjct: 426 GQHGGYVTAPWCGDEACEEPIK-----EPMAAEIVMVPFEDDDPLAEADHGETCAICDDD 480
Query: 501 AKRWSYWGRSY 511
A+R +Y+ +SY
Sbjct: 481 AERTAYFAKSY 491
>sp|B2A5T8|SYP_NATTJ Proline--tRNA ligase OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=proS PE=3 SV=1
Length = 483
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/439 (43%), Positives = 292/439 (66%), Gaps = 5/439 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ E++ +WY +V+ ++++Y + GC +IRP+ +IWE M++ D IK+ +N YFP
Sbjct: 15 QSEDYSQWYLDVIKKTKLVDYAPVKGCMVIRPYGYAIWEKMKEGLDRRIKETGHENAYFP 74
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ ++LQKE DH+EGFAPEVAW+TK G+ +L +A+RPTSE + YS WI+ RD
Sbjct: 75 LFIPESLLQKEADHVEGFAPEVAWITKGGDEELSESLAVRPTSEAMFGEMYSDWIQSWRD 134
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE S PF+R+ EFLWQEGHTA T+ +A++E LQ+L++Y+ E
Sbjct: 135 LPVLINQWANVVRWEKST-KPFLRTSEFLWQEGHTAHRTEEDAEEEALQMLDVYKDFVEN 193
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
+A+PV+ G KSE EKFAG L T +EA + + GR +Q TSH LGQ+F+K+F+I F ++
Sbjct: 194 DMAIPVLNGLKSEKEKFAGALRTFCIEALMSD-GRALQAGTSHNLGQHFAKVFDITFLDQ 252
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
E+ WQ SW +TR IG ++MVHGD++GL +PP+VA Q+++VP+ K Q + +
Sbjct: 253 DDERKYVWQTSWGVSTRLIGALIMVHGDNRGLKIPPKVAPHQLVMVPITPKKQREQ-VLE 311
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
+ L + +D+R+ ++PGWK++ WEMKGVP+R+EIGPKD+ K+QV VRRD
Sbjct: 312 ESDKLYQELKDK-FRVKLDNREEHTPGWKFNEWEMKGVPIRLEIGPKDIEKDQVVLVRRD 370
Query: 394 NGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MIL 452
K+ + R L+++++EL+++IQ + AK + + DE + L Q++ MI
Sbjct: 371 TDEKMFVKRDELIDKLEELIEDIQNKMLQTAKNFLEENTHTASSLDELGQILEQKRGMIK 430
Query: 453 APWCDEEEVEKDVKARTKG 471
A WC + E+ VK TK
Sbjct: 431 AYWCGNQACEEKVKDDTKA 449
>sp|A0R9A0|SYP2_BACAH Proline--tRNA ligase 2 OS=Bacillus thuringiensis (strain Al Hakam)
GN=proS2 PE=3 SV=2
Length = 476
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/480 (42%), Positives = 296/480 (61%), Gaps = 15/480 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATSHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + +RPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW +TR IG ++MVH D+ GLV+PP+VA VQV++VP+
Sbjct: 249 RNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKA 308
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
++ + I A+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 309 TELQGHIQKVARVKIDAS-----NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K + L ERI LL+EI SLF AK RD V +++E + +++ I
Sbjct: 364 DTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTSFEEMKKVADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC E E+ +K E+G + + C P EQ + E +C GK AK+ YWG++Y
Sbjct: 424 KAMWCGELACEEKLKE----EVGVS-SRCMPFEQEHLAEECVC--CGKEAKQMVYWGKAY 476
>sp|Q63GI2|SYP2_BACCZ Proline--tRNA ligase 2 OS=Bacillus cereus (strain ZK / E33L)
GN=proS2 PE=3 SV=2
Length = 476
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 296/480 (61%), Gaps = 15/480 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + IRPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW +TR IG ++MVHGD+ GLV+PP+VA VQV++VP+
Sbjct: 249 RTGKWQYVHQTSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKA 308
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
++ + I A+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 309 IELQGHIQKVARVKIDAS-----NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K + L ERI LL+EI SLF AK RD V ++E + +++ I
Sbjct: 364 DTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTNFEEMKKIADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC E E+ +K E+G + + C P EQ + + +C GK AK+ YWG++Y
Sbjct: 424 KAMWCGELACEEKLKE----EVGVS-SRCMPFEQEHLADECVC--CGKEAKQMVYWGKAY 476
>sp|Q8ESQ5|SYP_OCEIH Proline--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM 14371
/ JCM 11309 / KCTC 3954 / HTE831) GN=proS PE=3 SV=1
Length = 478
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/477 (41%), Positives = 296/477 (62%), Gaps = 14/477 (2%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
+++F +WY++VV ++++Y + G II+P+ +IWE ++ D K+ N FPL
Sbjct: 16 EDDFAQWYTDVVKQADLVDYGQVRGTMIIKPYGYAIWENIKNELDRMFKETGHTNVAFPL 75
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ ++LQKEKDH+EGFAPEVAWVT GE +L IA+RPTSE + YYS I +RDL
Sbjct: 76 FIPESLLQKEKDHVEGFAPEVAWVTHGGEEELTERIAVRPTSEVLFCDYYSNNIHSYRDL 135
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQW NVVRWE PF+RS EF WQEGHTA AT EA +E ++LE Y ++ EE+
Sbjct: 136 PKLYNQWGNVVRWE-KTTRPFLRSSEFHWQEGHTAHATDEEATEETNRMLETYAKLVEEY 194
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LAVPV+KG+K++ EKFAG +T T+EA + + G+ +Q TSH G F++ F+I + ++
Sbjct: 195 LAVPVLKGRKTDKEKFAGAKFTLTIEALM-HDGKALQSGTSHHFGTGFAEAFDINYLDKD 253
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
G+ Q SW +TR +G ++MVHGD++GLV+PP++A Q ++VP+ +G+ D
Sbjct: 254 GKSQFVHQTSWGLSTRIMGALIMVHGDNRGLVVPPKIAPTQAMIVPIA---QHKEGVLDK 310
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
+ L + ++D D PGWK++ +EMKG+P+R+E+GPKD+ K QV VRRD
Sbjct: 311 AYELRDKLAKVA-RVDIDGSDKM-PGWKFNEYEMKGIPVRVEMGPKDIEKEQVVLVRRDT 368
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMILAP 454
G K +P + + R+ ELLDE+Q +L+ A R+ + K DEF E + + I A
Sbjct: 369 GEKEFVPVAEVETRLVELLDEVQSNLYQRALDHRNEMTTVAKDMDEFKEKIEEGGFIKAM 428
Query: 455 WCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC + E+ +K T A + C P E+ ++ + +C GK AK YW R+Y
Sbjct: 429 WCGDVSCEESIKEET-----TATSRCIPYEEEKVADTCVC--CGKKAKELVYWARAY 478
>sp|Q6HNZ7|SYP2_BACHK Proline--tRNA ligase 2 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=proS2 PE=3 SV=1
Length = 476
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/480 (42%), Positives = 296/480 (61%), Gaps = 15/480 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + +RPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW +TR IG ++MVH D+ GLV+PP+VA VQV++VP+
Sbjct: 249 RNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKA 308
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
++ + I A+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 309 IELQGHIQKVARVKIDAS-----NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K + L ERI LL+EI SLF AK RD V +++E + +++ I
Sbjct: 364 DTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTSFEEMKKVADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC E E+ +K E+G + + C P EQ + + +C GK AK+ YWG++Y
Sbjct: 424 KAMWCGEVACEEKLKE----EVGVS-SRCMPFEQEHLADECVC--CGKEAKQMVYWGKAY 476
>sp|B3EE36|SYP_CHLL2 Proline--tRNA ligase OS=Chlorobium limicola (strain DSM 245 / NBRC
103803) GN=proS PE=3 SV=1
Length = 481
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/479 (41%), Positives = 301/479 (62%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ +++ +WY ++V + ++ +Y D+ GC +IRP +IWE MQ DA K+ N YFP
Sbjct: 8 RSQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDAMFKETGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + + KE +HIEGFAPE A VT G +L + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 LFIPESYIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWASYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE F+R+ EFLWQEGHTA ATK EA +EVL+++ +Y++ EE
Sbjct: 128 LPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATKEEASEEVLRMITIYKKFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI G+K+E EKFAG T +EA + + G+ +Q TSH LGQNF+K F+ F+
Sbjct: 187 YMALPVIMGRKTESEKFAGADETFCIEAMMQD-GKALQAGTSHHLGQNFAKAFDCQFQTS 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
GE W SW +TR IG ++M H DD+GLVLPP++AS QV+V+P+ D + +
Sbjct: 246 AGELDFVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVVIPI--LRGDKTAVLE 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
A V TL + GI A +DS D SPGWK++ +E++G+PLRIE+GP+DLA + RRD
Sbjct: 304 QADAIVCTLKKHGIPAFVDSSDQNSPGWKFAEYELQGIPLRIELGPRDLAGKKCVVARRD 363
Query: 394 NGAKVDLP-RSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K +LP + ++ E+L+ IQ++L+ A R+ VK+++EF A+ + ++
Sbjct: 364 TLEKTELPLDDTFSMQVSEILNSIQQNLYDRALSFRNEKTVEVKSYEEFKTAV-ENGFVI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W +E E +K TK + L++ + E +C SG+PA R + ++Y
Sbjct: 423 AHWDGTDETESKIKEETKATIRVLPEEQEYLDRYTMMEPGVCIYSGRPAARKVVFAKAY 481
>sp|Q73E50|SYP2_BACC1 Proline--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 10987)
GN=proS2 PE=3 SV=1
Length = 476
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 297/480 (61%), Gaps = 15/480 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + IRPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCIRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW + R IG ++MVH D+ GLV+PP+VA VQV++VP+ +G+
Sbjct: 249 RNGKWQYVHQTSWGVSARMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIA---QHKEGVL 305
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
T E + + +D+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 306 AKATELQEHIQKVAR-VKIDA-SNKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K + L ERI LL+EI SLF AK RD V ++E + +++ I
Sbjct: 364 DTKEKEFIAMEQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTKFEEMKKVADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC E E+ +K E+G + + C P EQ + +C GK AK+ YWG++Y
Sbjct: 424 KAMWCGELACEEKLKE----EVGVS-SRCMPFEQEHLANECIC--CGKEAKQMVYWGKAY 476
>sp|A0RUI8|SYP_CENSY Proline--tRNA ligase OS=Cenarchaeum symbiosum (strain A) GN=proS
PE=3 SV=1
Length = 476
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/458 (42%), Positives = 279/458 (60%), Gaps = 6/458 (1%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
+G++ K ++F EWY++VV+ E+ +Y + G ++RP SIWE+++ D ++ +
Sbjct: 3 VGITASKSDDFSEWYTQVVLKAELADYAPVKGLIVLRPDGYSIWESIRTSLDVKLAARGV 62
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
+N + P+ + ++L KEK+H GF PEV WVT SGE+ + +A+RPTSET+ Y YSKW
Sbjct: 63 RNGFLPVLIPESLLGKEKEHFAGFNPEVFWVTHSGENKVGDRLALRPTSETLAYSLYSKW 122
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
I+ RDLPL++N W +R E + PF+R+ EFLWQEGHT A EA+ EV ILELY
Sbjct: 123 IKSWRDLPLRINFWNTALRAEIKSTKPFLRTSEFLWQEGHTVHACSEEAESEVAAILELY 182
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
R E LA+PVI G+KSE EKF G +YTTT+E+ +P+ GR +Q TSH LGQNFS+ FE
Sbjct: 183 RETVEGDLAIPVITGRKSEKEKFVGAVYTTTMESMMPD-GRALQMGTSHFLGQNFSRPFE 241
Query: 268 IIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDAD 327
+ F ++ + AWQ SW + R IG M+MVHGDDKGLVLPP+VA +QV+++P+ Y +
Sbjct: 242 VKFADKDNVEHFAWQTSWGLSWRLIGAMIMVHGDDKGLVLPPKVAPLQVVIIPISYSGEE 301
Query: 328 TQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQV 387
+ A L +AGI A D R+ +PG+K+ WEM+GVP+RIEIGP+DL
Sbjct: 302 GAQVLAAAEGMEAELLKAGIRARTDKREELTPGFKFHDWEMRGVPVRIEIGPRDLKDGSA 361
Query: 388 RAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQ 447
R +G K +P I+E L +Q + AAK+ D I ++ +A+
Sbjct: 362 VLATRHDGKKSKVPLDGAAVNIEEELCRVQTEMLGAAKRALDGMIHDASSYGALTKAVEG 421
Query: 448 RKMILAPWCDEEEVEKDVKARTKGEM-----GAAKTLC 480
+ A WC E E+ VK T ++ G A+ C
Sbjct: 422 GGFVRAAWCGGLECEEKVKEETGADIRVVPEGGAEGAC 459
>sp|B3EP23|SYP_CHLPB Proline--tRNA ligase OS=Chlorobium phaeobacteroides (strain BS1)
GN=proS PE=3 SV=1
Length = 481
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/479 (41%), Positives = 296/479 (61%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
++E++ +WY ++V + ++ +Y D+ GC +IRP +IWE MQ D K N YFP
Sbjct: 8 REEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKATGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + +QKE DHIEGFAPE A VT G +L + +RPTSETV++ Y KWI+ +RD
Sbjct: 68 LFIPESYIQKEADHIEGFAPECAVVTHGGGEELAEKLYVRPTSETVIWASYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LPL +NQW NVVRWE F+R+ EFLWQEGHTA AT EA DEVL+++ +Y+ EE
Sbjct: 128 LPLLINQWANVVRWEMRTRL-FLRTSEFLWQEGHTAHATPEEAQDEVLRMINVYKTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PV+ G+K++ EKFAG T +EA + + + +Q TSH LGQNF+K F+ F+++
Sbjct: 187 YMAMPVLIGRKTDSEKFAGADETWCIEAMMQDK-KALQAGTSHNLGQNFAKAFDCQFQSK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
G W SW +TR IG ++M H DD+GLVLPP++AS QV++VP+ D Q + +
Sbjct: 246 NGTLEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVIVPI--LRGDKQAVAE 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
A + L GI A +D + SPGWK++ +E++G+P+R+EIGP+D++ N A RRD
Sbjct: 304 KAHALADELNSNGIHAFVDDSEQNSPGWKFAEYELQGIPVRLEIGPRDISSNICIAARRD 363
Query: 394 NGAKVDLP-RSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
G K + + I LLD IQ+S+F +A + R+A + V ++DEF + + + ++
Sbjct: 364 TGEKQQIALDDTFAASISSLLDAIQQSMFKSALEFREANTREVSSYDEFKKCI-DKGFLI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W EE E +K TK + ++ + E +C SG P+K + ++Y
Sbjct: 423 AHWDGREETEAKIKEETKATIRLIPEDPDFRKKYSMDEPGICICSGNPSKGKVVFAKAY 481
>sp|Q9HS52|SYP_HALSA Proline--tRNA ligase OS=Halobacterium salinarum (strain ATCC 700922
/ JCM 11081 / NRC-1) GN=proS PE=3 SV=2
Length = 501
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 300/497 (60%), Gaps = 16/497 (3%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
LG++ K+ + G+WY+EVV + +Y + G + RP ++WE +Q D K +
Sbjct: 8 LGITESKEHSPGDWYAEVVQKAGLADYAPMGGFIVTRPRGYALWEAIQDNLDGWFKDTGV 67
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
+N YFP+F+ L++EKD +EGF PEVAWVT+ G DL+ +A+RPTSE+++ PY S+W
Sbjct: 68 ENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHDDLDQRLAVRPTSESIIAPYLSQW 127
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
+R HRDLPL++NQW +VVRWE + PF R++EFLWQEGHTA AT A E L+ Y
Sbjct: 128 VRSHRDLPLRVNQWNSVVRWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQY 187
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
R+YE+ L +PV++G+K + +KF G T +VEA +P+ G+ +QG TSH LGQ+F+ F+
Sbjct: 188 HRLYEDVLGIPVLRGRKPDHDKFPGADTTMSVEALMPD-GKSVQGGTSHHLGQSFADAFD 246
Query: 268 IIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDAD 327
I F +E + A+ SW + R IG +VM H DD+GLVLPP VA QV++VP+ + D
Sbjct: 247 ITFADEDEAERTAYTTSWGLSWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIWQE--D 304
Query: 328 TQGIFDACTATVETLCEA-GICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQ 386
T+ + A + EA G+ + D RD +PG+K++ WE+ GVP+R EIGP ++ ++
Sbjct: 305 TKDDVEQYGAEIAAELEAQGVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDE 364
Query: 387 VRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALG 446
V V R +G R+++ +R+ + LDE+ + L+ AA R ++ + + +G
Sbjct: 365 VTVVHRPDGESTVEDRAAIADRVHDHLDEVYDKLYDAAADRLAENVREADNRADILGTIG 424
Query: 447 QR-KMILAPWCDEEEVEKDVKARTKGEM-------GAAKTLCSPLEQPEIPE----GTLC 494
Q + APWC +++ E ++K + E+ +A S LE +PE G C
Sbjct: 425 QHGGYVKAPWCGDQDCEAEIKDQIAAEIVMVPLGEDSAARAASELEGERVPEPDHDGEDC 484
Query: 495 FASGKPAKRWSYWGRSY 511
G A R +Y+ +SY
Sbjct: 485 AICGDEATRTAYFAKSY 501
>sp|B0R3A3|SYP_HALS3 Proline--tRNA ligase OS=Halobacterium salinarum (strain ATCC 29341
/ DSM 671 / R1) GN=proS PE=3 SV=1
Length = 501
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/497 (39%), Positives = 300/497 (60%), Gaps = 16/497 (3%)
Query: 28 LGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKI 87
LG++ K+ + G+WY+EVV + +Y + G + RP ++WE +Q D K +
Sbjct: 8 LGITESKEHSPGDWYAEVVQKAGLADYAPMGGFIVTRPRGYALWEAIQDNLDGWFKDTGV 67
Query: 88 QNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKW 147
+N YFP+F+ L++EKD +EGF PEVAWVT+ G DL+ +A+RPTSE+++ PY S+W
Sbjct: 68 ENAYFPMFIPEDYLEREKDIVEGFDPEVAWVTQGGHDDLDQRLAVRPTSESIIAPYLSQW 127
Query: 148 IRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELY 207
+R HRDLPL++NQW +VVRWE + PF R++EFLWQEGHTA AT A E L+ Y
Sbjct: 128 VRSHRDLPLRVNQWNSVVRWEATETKPFFRTKEFLWQEGHTAHATDEAAWAETTLRLDQY 187
Query: 208 RRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFE 267
R+YE+ L +PV++G+K + +KF G T +VEA +P+ G+ +QG TSH LGQ+F+ F+
Sbjct: 188 HRLYEDVLGIPVLRGRKPDHDKFPGADTTMSVEALMPD-GKSVQGGTSHHLGQSFADAFD 246
Query: 268 IIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDAD 327
I F +E + A+ SW + R IG +VM H DD+GLVLPP VA QV++VP+ + D
Sbjct: 247 ITFADEDEAERTAYTTSWGLSWRAIGALVMSHSDDQGLVLPPTVAPKQVVIVPIWQE--D 304
Query: 328 TQGIFDACTATVETLCEA-GICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQ 386
T+ + A + EA G+ + D RD +PG+K++ WE+ GVP+R EIGP ++ ++
Sbjct: 305 TKDDVEQYGAEIAAELEAQGVRVHFDDRDGRNPGFKFNEWELNGVPVRFEIGPNEVEDDE 364
Query: 387 VRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALG 446
V V R +G R+++ +R+ + LDE+ + L+ AA R ++ + + +G
Sbjct: 365 VTVVHRPDGESTVEDRAAIADRVHDHLDEVYDKLYDAAADRLAENVREADNRADILGTIG 424
Query: 447 QR-KMILAPWCDEEEVEKDVKARTKGEM-------GAAKTLCSPLEQPEIPE----GTLC 494
Q + APWC +++ E ++K + E+ +A S LE +PE G C
Sbjct: 425 QHGGYVKAPWCGDQDCEAEIKDQIAAEIVMVPLGEDSAARAASELEGERVPEPDHDGEDC 484
Query: 495 FASGKPAKRWSYWGRSY 511
G A R +Y+ +SY
Sbjct: 485 AICGDEATRTAYFAKSY 501
>sp|Q18JG3|SYP_HALWD Proline--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=proS PE=3 SV=1
Length = 512
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/455 (41%), Positives = 285/455 (62%), Gaps = 5/455 (1%)
Query: 22 VKKETGLGLSYKKDENFGEWYSEVVVNGEMIEY--YDISGCYIIRPWAMSIWETMQKFFD 79
+ ++ LG++ K N GEWY+EVV E+ Y +SG + RP A +WE +Q + D
Sbjct: 1 MSEDQDLGITQSKIHNTGEWYAEVVQKAELANYGPEGMSGFIVTRPRAYGLWERVQSYLD 60
Query: 80 AEIKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETV 139
K+ +QN YFPLF+ L++EK+ +EGF PEVAWV ++G ++LE +A+RPTSE++
Sbjct: 61 TRFKQTGVQNAYFPLFIPEGYLEREKEIVEGFDPEVAWVEQAGRNELEERLAVRPTSESI 120
Query: 140 MYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDE 199
+ PY S+WIR +RDLPL++NQW +VVRWE + PF R++EFLWQEGHTA AT+++A E
Sbjct: 121 IAPYLSQWIRSYRDLPLRVNQWTSVVRWEATETKPFFRTKEFLWQEGHTAHATRADAWAE 180
Query: 200 VLQILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLG 259
+ L Y YE+ LA+PV++G K E +KF G TTTVEA +P+ G+ +QGATSH LG
Sbjct: 181 TMLRLNQYESTYEDLLAIPVLQGAKPEHDKFPGADTTTTVEALMPD-GKSVQGATSHYLG 239
Query: 260 QNFSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVV 319
F+ F+I + + +A SW + R +G ++M H D++GLVLPP VA QV++V
Sbjct: 240 TEFADAFDITYTDTDETSRVAHTTSWGLSWRALGALIMTHSDNQGLVLPPTVAPEQVVIV 299
Query: 320 PVPYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGP 379
P+ ++ + + + L +AGI +D RD+ +PG+K++ WE+KGVPLR EIGP
Sbjct: 300 PI-WQTETKERVLEYAEDVANNLDDAGIRVELDDRDDQNPGFKFNEWELKGVPLRAEIGP 358
Query: 380 KDLAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWD 439
+ + V + R +G + RS +VE ++E D + L+ AA++ ++ I+I +T
Sbjct: 359 DEATEGTVTLIHRPDGESITAERSEIVETVQEQFDAVYAKLYAAAEETLNSNIRIAETRS 418
Query: 440 EFVEALGQR-KMILAPWCDEEEVEKDVKARTKGEM 473
E + +GQ + PWC +E E +K E+
Sbjct: 419 ELLGTIGQHGGYVKTPWCGDEGCETAIKDEIAAEI 453
>sp|Q5SM28|SYP_THET8 Proline--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=proS PE=1 SV=1
Length = 477
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 299/480 (62%), Gaps = 15/480 (3%)
Query: 22 VKKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAE 81
+ KE GL + ++F EWY EV+ E+ +Y + G ++RP+ +IWE +Q+ D
Sbjct: 1 MAKEKGLT---PQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRM 57
Query: 82 IKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMY 141
K+ QN YFPLF+ + L+KE +H+EGF+PE+A VT +G +LE P+A+RPTSETV+
Sbjct: 58 FKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIG 117
Query: 142 PYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVL 201
+SKWIR RDLP LNQW NVVRWE PF+R+ EFLWQEGHTA AT+ EA++EV
Sbjct: 118 YMWSKWIRSWRDLPQLLNQWGNVVRWEMRT-RPFLRTSEFLWQEGHTAHATREEAEEEVR 176
Query: 202 QILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQN 261
++L +Y R+ E+ A+PVI+G K+E EKFAG +YTTT+EA + + G+ +Q TSH LG+N
Sbjct: 177 RMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD-GKALQAGTSHYLGEN 235
Query: 262 FSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPV 321
F++ F+I F++ + SW + R IG ++M HGDD+GLVLPPR+A +QV++VP+
Sbjct: 236 FARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPI 295
Query: 322 PYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKD 381
YKD + + +A + L G+ ++D RD ++PG+K+ WE+KGVP R+E+GPKD
Sbjct: 296 -YKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKD 354
Query: 382 LAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEF 441
L Q R G K LP ++L E + LD E L+ A R+ + V T++ F
Sbjct: 355 LEGGQAVLASR-LGGKETLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAF 413
Query: 442 VEALGQRKMILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPA 501
EA+ Q LA C ++ E+ ++ T A T C P E PE C G+P+
Sbjct: 414 KEAV-QEGFALAFHCGDKACERLIQEET-----TATTRCVPFEAE--PEEGFCVRCGRPS 465
>sp|Q72GF9|SYP_THET2 Proline--tRNA ligase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=proS PE=3 SV=1
Length = 477
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/480 (42%), Positives = 300/480 (62%), Gaps = 15/480 (3%)
Query: 22 VKKETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAE 81
+ KE GL + ++F EWY EV+ E+ +Y + G ++RP+ +IWE +Q+ D
Sbjct: 1 MAKEKGLT---PQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRM 57
Query: 82 IKKMKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMY 141
K+ QN YFPLF+ + L+KE +H+EGF+PE+A VT +G +LE P+A+RPTSETV+
Sbjct: 58 FKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIG 117
Query: 142 PYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVL 201
+SKWIR RDLP LNQW NVVRWE PF+R+ EFLWQEGHTA AT+ EA++EV
Sbjct: 118 YMWSKWIRSWRDLPQLLNQWGNVVRWEMRT-RPFLRTSEFLWQEGHTAHATREEAEEEVR 176
Query: 202 QILELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQN 261
++L +Y R+ E+ A+PVI+G K+E EKFAG +YTTT+EA + + G+ +Q TSH LG+N
Sbjct: 177 RMLSIYARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKD-GKALQAGTSHYLGEN 235
Query: 262 FSKMFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPV 321
F++ F+I F++ + SW + R IG ++M HGDD+GLVLPPR+A +QV++VP+
Sbjct: 236 FARAFDIKFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPI 295
Query: 322 PYKDADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKD 381
YKD + + +A + L G+ ++D RD ++PG+K+ WE+KGVP R+E+GPKD
Sbjct: 296 -YKDESRERVLEAAQGLRQALQAKGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKD 354
Query: 382 LAKNQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEF 441
L + Q R G K LP ++L E + L E L+ A R+A + V T++ F
Sbjct: 355 LEQGQAVLASR-LGGKETLPLAALPEALPGKLVAFHEELYRRALAFREAHTRKVDTYEAF 413
Query: 442 VEALGQRKMILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPA 501
EA+ Q LA C ++ E+ ++ T A T C P E PE C G+P+
Sbjct: 414 KEAV-QEGFALAFHCGDKACERLIQEET-----TATTRCVPFEAE--PEEGFCVRCGRPS 465
>sp|Q81Z76|SYP2_BACAN Proline--tRNA ligase 2 OS=Bacillus anthracis GN=proS2 PE=3 SV=1
Length = 508
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/463 (42%), Positives = 279/463 (60%), Gaps = 15/463 (3%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
K +E+F +WY+++V E+++Y + GC I+RP+ ++WE MQK D ++K +N Y
Sbjct: 11 KMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHENVYM 70
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
P+F+ ++LQKEKDH+EGFAPEVAWVT G+ L + +RPTSET+ ++SK ++ +
Sbjct: 71 PMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIVQSYN 130
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP NQWC+VVRWE PF+R+ EFLWQEGHT T E+ E L IL LY E
Sbjct: 131 DLPKLYNQWCSVVRWE-KTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYASFCE 189
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
++LA+PVIKG+K+E EKFAG T T+E+ + + G+ +Q TSH G NFS+ F+I F +
Sbjct: 190 DYLAIPVIKGQKTEKEKFAGAKATYTIESLM-HDGKALQTGTSHNFGTNFSEAFDIKFLD 248
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
G+ Q SW +TR IG ++MVH D+ GLV+PP+VA VQV++VP+
Sbjct: 249 RNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPIAQHKEGVLAKA 308
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
++ + I A+ N +PGWK++ +EMKG+P+R+E+GPKD+ KNQV VRR
Sbjct: 309 TELQGHIQKVARVKIDAS-----NKTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLVRR 363
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MI 451
D K + L ERI LL+EI SLF AK RD V ++E + +++ I
Sbjct: 364 DTKEKEFISMDQLEERIPALLEEIHNSLFNKAKVFRDENTYSVTNFEEMKKLADEKQGFI 423
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLC 494
A WC E E+ +K C P EQ + E +C
Sbjct: 424 KAMWCGELACEEKLKEEVASR-------CMPFEQEHLAEECVC 459
>sp|Q3ASP3|SYP_CHLCH Proline--tRNA ligase OS=Chlorobium chlorochromatii (strain CaD3)
GN=proS PE=3 SV=1
Length = 481
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/479 (40%), Positives = 289/479 (60%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ E++ +WY ++V + ++ +Y D+ GC +IRP +IWE MQ D K+ N YFP
Sbjct: 8 RSEDYSQWYIDLVRSAKLADYADVKGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + + KE +HIEGFAPE A VT G +L + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 LFIPESFIAKEAEHIEGFAPECAVVTHGGGQELAEKLYVRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LPL +NQW NVVRWE F+R+ EFLWQEGHTA AT EA +EVL+++ +Y+ EE
Sbjct: 128 LPLLINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATHEEAQEEVLRMINVYKTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI GKKS+ EKFAG L T +EA + + G+ +Q TSH LGQNF+K F+ F+
Sbjct: 187 YMALPVILGKKSDSEKFAGALETFCIEAMMQD-GKALQAGTSHDLGQNFAKAFDCKFQTH 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
+ W SW +TR IG ++M H DD+GLVLPPR+A+ QV+++P+ D + +
Sbjct: 246 EKTLEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPRLATRQVVIIPIL--KGDKESVLH 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
L +AGI A +DS + SPGWK++ +E++G+PLR+E+GP+D+ RRD
Sbjct: 304 HADNIAAALTKAGISAFVDSSEQNSPGWKFAEYELQGIPLRLELGPRDIKNGMCVVARRD 363
Query: 394 NGAKVDLPRSS-LVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K ++ LV I E+L++IQ+ +F AA + R V +D+F A+ ++ ++
Sbjct: 364 TLEKTEIALDDRLVMSINEILNDIQQDMFDAALRFRQERTVQVNNYDDFKVAV-EKGFVI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W E E +K TK + + I E C SGKP+ R + ++Y
Sbjct: 423 AHWDGTVETEAKIKEETKATIRVLPQEDDYCDTYGINEPGTCIYSGKPSARKVVFAKAY 481
>sp|B4SG51|SYP_PELPB Proline--tRNA ligase OS=Pelodictyon phaeoclathratiforme (strain DSM
5477 / BU-1) GN=proS PE=3 SV=1
Length = 481
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/479 (40%), Positives = 296/479 (61%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ E++ +WY ++V + ++ +Y D+ GC IRP +IWE MQ D K+ N YFP
Sbjct: 8 RSEDYSQWYIDLVRSAKLADYADVRGCMDIRPNGYAIWEKMQAALDRMFKETGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + + KE +HIEGFAPE A VT G +L + IRPTSET+++ Y KWI+ +RD
Sbjct: 68 LFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYIRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE F+R+ EFLWQEGHTA A E+ +EVL+++ +Y+ EE
Sbjct: 128 LPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHANPEESQEEVLRMINVYKTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI GKK++ EKFAG + T +EA + ++ + +Q TSH LGQNF+K F+ F+ +
Sbjct: 187 YMAMPVIMGKKTDNEKFAGAVDTWCIEAMMQDS-KALQAGTSHNLGQNFAKAFDCQFQTK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
G W SW +TR IG ++M H DD+GLVLPP++A+ QV+++P+ D + +
Sbjct: 246 DGVLDYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPI--LRGDKAAVIE 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
A + L + GI + +DS + SPGWK++ +E++G+P+RIE+GP+D+ K A RRD
Sbjct: 304 RANALAQELNKNGIPSFVDSSEQNSPGWKFAEYELQGIPIRIELGPRDIEKGICIAARRD 363
Query: 394 NGAKVDLPRS-SLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K +L +L ++I E+L+ IQES+F A Q R V++++EF A+ ++ ++
Sbjct: 364 TLEKTELALDETLPDQISEILNTIQESMFERALQFRTEHTFEVQSYEEFKVAV-EKGFVI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W E E +KA TK + + Q I E C SGKPA R + ++Y
Sbjct: 423 AHWDGTAETEAKIKAETKATIRVLPEEADYIAQYRIDEPGTCIYSGKPAARKVVFAKAY 481
>sp|Q1AX25|SYP_RUBXD Proline--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129) GN=proS PE=3 SV=1
Length = 476
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/480 (42%), Positives = 296/480 (61%), Gaps = 14/480 (2%)
Query: 33 KKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
KK E+ WY E+V ++ +Y + G + IRP+ +IWE +Q DA K N YF
Sbjct: 10 KKSEDSSRWYLELVRMAKLADYGPVRGTFAIRPYGFAIWERIQADLDARFKATGHVNAYF 69
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
PL + + L KE +H+EGFAPE AWVT G+ +LE +AIRPTSE+++ +Y KWI +R
Sbjct: 70 PLLIPESYLTKEAEHVEGFAPECAWVTVGGDDELEERLAIRPTSESIICDFYRKWIHSYR 129
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYE 212
DLP+ +NQWCNV+RWE PF+R+ EFLWQEGHT AT EA +E L++L +YR +
Sbjct: 130 DLPVLINQWCNVLRWEMVT-RPFLRTAEFLWQEGHTVHATAEEAREEALRMLNVYRDCFY 188
Query: 213 EFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFEN 272
E LA+PV+ G KS E+FAG + T T E + + GR +Q ATSH LGQNF++ F+I F +
Sbjct: 189 EVLAIPVLTGMKSPSERFAGAVETFTCEGLMGD-GRALQAATSHDLGQNFARAFDITFLD 247
Query: 273 EKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIF 332
E E+ +Q SW ++TRTIG +++VHGDD+GL LPP++A Q +VVP+ ++ + +
Sbjct: 248 ENQERVHPYQTSWGFSTRTIGALILVHGDDRGLRLPPKLAPTQAVVVPI-WRGKNKGEVR 306
Query: 333 DACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRR 392
A L EAG+ A D + +SPGWK++ E++GVP+R+E+GPKD+ K Q VRR
Sbjct: 307 REAEALHRELAEAGLRAEADLDEEHSPGWKFNEHELRGVPVRVELGPKDIEKGQAVLVRR 366
Query: 393 DNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTW-DEFVEALGQRKMI 451
D G K + R + R+ EL+DEIQ+++ A+ RD + +T+ + +R +
Sbjct: 367 DTGEKEFVGRGAAARRLVELMDEIQQNMLRQAEAFRDENTRRAETYEEFKEIIEEKRGFV 426
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
+APW EE E+ +K TK A P E+ E + SG+P K + + R+Y
Sbjct: 427 VAPWDGTEETEQRIKEETK-----ATIRLLPFEREEGKD----LVSGRPGKT-AVFARAY 476
>sp|A5UU62|SYP_ROSS1 Proline--tRNA ligase OS=Roseiflexus sp. (strain RS-1) GN=proS PE=3
SV=1
Length = 480
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/483 (40%), Positives = 294/483 (60%), Gaps = 16/483 (3%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDI-SGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYF 92
+ +++ +WY ++V ++ +Y ++ GC + +P +IWE +Q+ D IK N YF
Sbjct: 9 RAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYAIWEAIQRGLDDRIKATGHVNAYF 68
Query: 93 PLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHR 152
PL + + L KE +H+EGFAPEVA VT++G DL P IRPTSET++ +YSKW+R +R
Sbjct: 69 PLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRPTSETIIGYFYSKWVRSYR 128
Query: 153 DLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQIL-ELYRRIY 211
DLPL +NQW NV+RWE PF+R+ EFLWQEGHT AT+ +A+ E L IL E+Y
Sbjct: 129 DLPLLINQWANVMRWEMRT-RPFLRTTEFLWQEGHTVHATEEDAERETLLILHEVYADFV 187
Query: 212 EEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFE 271
E+ +A+PVIKG KSE EKF G L + +EA + + GR +Q TSH LGQNF++ F+I +
Sbjct: 188 EKEMAIPVIKGLKSEKEKFPGALRSYCIEAMMQD-GRALQAGTSHNLGQNFARAFDITYT 246
Query: 272 NEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGI 331
+++ AW SW +TR IG ++M H DD+GLV+PPR+A QV+VVP+ DA+ +
Sbjct: 247 DQQNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSVV 306
Query: 332 FDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVR 391
+A + + +D RDN +PG+K++ WE+KGVP+R+EIGPKD+ K V R
Sbjct: 307 MEAVQRMTAE-WKGRLRFKIDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIAR 365
Query: 392 RDNG---AKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQR 448
RD K +P+ L +R+ LL+EIQ++L+ A R+ V T+DE + + +R
Sbjct: 366 RDQPGREGKSFVPQDGLTDRLTALLEEIQQALYRRALTFREDHTADVATYDELKQQV-ER 424
Query: 449 KMILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWG 508
W E EK ++ T+ A C PL+QP+ + C +GK + +
Sbjct: 425 GFARCYWAGTTEDEKRIQEETR-----ATIRCIPLDQPQ--QAGRCVYTGKETTQQVIFA 477
Query: 509 RSY 511
R+Y
Sbjct: 478 RAY 480
>sp|A9KL35|SYP_CLOPH Proline--tRNA ligase OS=Clostridium phytofermentans (strain ATCC
700394 / DSM 18823 / ISDg) GN=proS PE=3 SV=1
Length = 477
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/478 (41%), Positives = 288/478 (60%), Gaps = 16/478 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
DE+F +WY++VV E+++Y + GC I RP +IWE +QK DA K ++N Y P+
Sbjct: 15 DEDFAQWYTDVVKKAELVDYSGVRGCTIFRPAGYAIWENIQKELDARFKATGVENVYMPM 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ ++L KEKDH+EGFAPEVAWVT G L+ + +RPTSET+ +YS I +RDL
Sbjct: 75 FIPESLLNKEKDHVEGFAPEVAWVTHGGGEQLQERLCVRPTSETLFCDFYSHIIESYRDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+R+ EFLWQEGHTA AT EA++ +Q+L LY EE
Sbjct: 135 PKLYNQWCSVVRWE-KTTRPFLRTLEFLWQEGHTAHATAEEAEERTIQMLNLYADFCEEV 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+P+++G+K++ EKFAG T T+EA + + G+ +Q TSH G F+K F I + +++
Sbjct: 194 LAIPMVRGRKTDKEKFAGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFNIQYTDKE 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
+ Q SW TTR IG ++MVHGD+ GLVLPPR+A QV++VP+ K +G+ +
Sbjct: 253 NKLQYVHQTSWGMTTRLIGALIMVHGDNSGLVLPPRIAPTQVVIVPIMQK---KEGVLEK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
E L +D D SPGWK+S EM+G+P+R+EIGPKD+ NQ VRRD
Sbjct: 310 AAELREKL--GAFRVKVDDSDK-SPGWKFSEHEMRGIPVRVEIGPKDIEANQAVLVRRDT 366
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK-MILA 453
K + + +I E+L+ +Q+ + A+ RDA + +EF + + + + A
Sbjct: 367 REKTVVSLDEIDTKIGEILEAMQKEMLERARNHRDAHTYEAHSTEEFADVVANKPGFVKA 426
Query: 454 PWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC E E ++K +T A + C P Q I + +C GK AK YWG++Y
Sbjct: 427 MWCGERACEDEIKEKT-----GATSRCMPFAQEHIADTCVC--CGKQAKSLVYWGKAY 477
>sp|B3QPX3|SYP_CHLP8 Proline--tRNA ligase OS=Chlorobaculum parvum (strain NCIB 8327)
GN=proS PE=3 SV=1
Length = 481
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/479 (40%), Positives = 294/479 (61%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ +++ +WY ++V + ++ +Y D+ GC +IRP +IWE MQ D K+ N YFP
Sbjct: 8 RQQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKETGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
+F+ + + KE +HIEGFAPE A VT G +L + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 MFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LPL +NQW NVVRWE F+R+ EFLWQEGHTA A EA +EV++++ +YR EE
Sbjct: 128 LPLLINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHADPEEAQEEVIRMINVYRTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI GKKSE EKFAG T +EA + + G+ +Q TSH LGQNF+K F+ F+ +
Sbjct: 187 YMAMPVIVGKKSESEKFAGADATYCIEAMMQD-GKALQAGTSHNLGQNFAKAFDCQFQTK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
+G W SW +TR IG ++M H DDKGLVLPP++AS QV+++P+ D + +
Sbjct: 246 EGVLDYVWATSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQVVIIPI--LKGDKEEVRA 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
+ L + GI +D +N SPGWK++ +E++G+P+RIE+GP+D+A+ + RRD
Sbjct: 304 HARFIAKALNKHGISTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDIAEGKCIVARRD 363
Query: 394 NGAKVD-LPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K + L + + E I+E+L+ IQ++L+ A Q R TW+EF +A ++ ++
Sbjct: 364 TFEKTEVLLDAEMTENIEEILNNIQQNLYERALQFRQDNTVEATTWEEF-KAGVEKGFVI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W +E E +K TK + T +Q + E C SG PA + + ++Y
Sbjct: 423 AHWDGTDETEALIKEETKATIRVMPTDEEYRKQYNMDEPGTCIRSGNPATQKVVFAKAY 481
>sp|B4S9D5|SYP_PROA2 Proline--tRNA ligase OS=Prosthecochloris aestuarii (strain DSM 271
/ SK 413) GN=proS PE=3 SV=1
Length = 481
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/484 (40%), Positives = 296/484 (61%), Gaps = 16/484 (3%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
++ ++ +WY ++V + ++ +Y D+ GC IIRP +IWE MQ DA K N YFP
Sbjct: 8 RETDYSQWYIDLVRSAKLADYSDVRGCMIIRPNGYAIWEKMQAALDAMFKATGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + ++KE +HIEGFAPE A VT G L + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 LFIPESFIKKEAEHIEGFAPECAVVTHGGGEQLAENLYVRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE F+R+ EFLWQEGHTA AT +EA +EV++++ +Y+ EE
Sbjct: 128 LPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATSTEAQEEVMRMINVYKTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI G+K+E EKFAG + T +EA + + + +Q TSH LGQNF+K F+ F+++
Sbjct: 187 YMALPVIMGRKTESEKFAGAVETWCIEAMMQDK-KALQAGTSHNLGQNFAKAFDCRFQSK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
+G W SW +TR IG ++M H DD+GLVLPP++A+ QV+++P+ D + +
Sbjct: 246 EGALEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPI--LKGDISAVIE 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
+ L + GI A +D D SPGWK++ +E++G+P+R+E+GP+D+ + A RRD
Sbjct: 304 KARSIAAELNQKGIAAFVDDSDQNSPGWKFAEYELQGIPVRLELGPRDIQSSTCIAARRD 363
Query: 394 NGAKVDLP-RSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
G K L SSL ++I LL+ IQ +LF A R+ V ++ EF +A ++
Sbjct: 364 TGEKSKLQLDSSLADQINSLLESIQTNLFNRALSFREKHTLEVSSYSEF-KANIDNGFLV 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAA-----KTLCSPLEQPEIPEGTLCFASGKPAKRWSYW 507
A W +E E +K TK + L ++QP GT C SGKP+ R +
Sbjct: 423 AHWDGTDETEAKIKEETKATIRVMPADPEMVLRYGMDQP----GT-CIYSGKPSTRKVIF 477
Query: 508 GRSY 511
++Y
Sbjct: 478 AKAY 481
>sp|Q1CXV1|SYP_MYXXD Proline--tRNA ligase OS=Myxococcus xanthus (strain DK 1622) GN=proS
PE=3 SV=1
Length = 483
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/480 (40%), Positives = 292/480 (60%), Gaps = 12/480 (2%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+++ F EWY ++V ++ +Y D+ GC +IRP ++WE MQ+ D K + +N YFP
Sbjct: 14 REKGFSEWYVDLVQKAKLADYSDVKGCMVIRPNGYALWENMQRVLDKMFKDLGHKNAYFP 73
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
L + + L+KE +H+EGF P++A VT +G S LE P IRPTSET++ ++KWI+ +RD
Sbjct: 74 LLIPESYLKKEAEHVEGFNPQLAVVTHAGGSKLEEPYVIRPTSETIINRSFAKWIQSYRD 133
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LPL LNQW NV+RWE F+R+ EFLWQEGHT T+ +A+ E Q+LE+YR E+
Sbjct: 134 LPLLLNQWANVMRWEMRTRL-FLRTTEFLWQEGHTCHETEEDAEKETRQMLEVYRTFAED 192
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PV+ G+KSE E+FAG L T ++EA + + + +Q TSH LGQNF+K F+ F+
Sbjct: 193 YMAMPVMTGQKSESERFAGALRTYSIEAMMQDK-KALQAGTSHNLGQNFAKAFDTQFQGR 251
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYK--DADTQGI 331
G+ WQ SW +TR IG ++M H DD GL++PP++A+ V+++P+ K DA+ +
Sbjct: 252 DGKMHHVWQTSWGVSTRLIGGLIMTHSDDAGLIVPPKLAATHVVIIPIFGKASDAEKAQV 311
Query: 332 FDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVR 391
+ A L +AG+ +D D SPG+KY+ E+ G LRIE+GPKDLAKN VR
Sbjct: 312 LEKTNALAADLRKAGLGVVLDDDDTKSPGFKYNEHELIGTCLRIELGPKDLAKNSCVMVR 371
Query: 392 RDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMI 451
RD K + V + + +LD +Q+ LF AK RD+ V +++E E Q +
Sbjct: 372 RDVRQKEFVSLDEAVSKAQAMLDAMQKDLFTKAKSFRDSHTFEVNSYEELKEKADQ-GFL 430
Query: 452 LAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
LA W ++ V+AR K E G T C P + + P C +G+P+ + ++Y
Sbjct: 431 LAHW----NLDPKVEARIKEETGLT-TRCRPFDLKQEPGK--CVVTGEPSPGRIVFSKAY 483
>sp|Q8KCD1|SYP_CHLTE Proline--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=proS PE=3 SV=1
Length = 481
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/479 (40%), Positives = 291/479 (60%), Gaps = 6/479 (1%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ E++ +WY ++V + ++ +Y D+ GC +IRP +IWE MQ D K+ N YFP
Sbjct: 8 RQEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKQTGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
+F+ + + KE +HIEGFAPE A VT G +L + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 MFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE F+R+ EFLWQEGHTA AT EA +EV++++ +YR EE
Sbjct: 128 LPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATPEEAQEEVIRMINIYRTFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI GKKSE EKFAG T +EA + + G+ +Q TSH LGQNF+K F+ F+ +
Sbjct: 187 YMAMPVIVGKKSESEKFAGADATYCIEAMMQD-GKALQAGTSHNLGQNFAKAFDCQFQTK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
G W SW +TR IG ++M H DDKGLVLPP++AS QV+++P+ + D +
Sbjct: 246 DGVLDYVWATSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQVVIIPILKGNKDE--VRA 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
+TL GI +D +N SPGWK++ +E++G+P+RIE+GP+DL + + RRD
Sbjct: 304 RARFIAKTLNRHGIPTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDLEQGKCIVARRD 363
Query: 394 NGAKVDLPRSS-LVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K +L L I+E+L+ IQ++L+ A Q R TW+EF +A ++ ++
Sbjct: 364 TFEKTELLLDDELTINIEEILNNIQQNLYDRALQFRLDNTVEATTWEEF-KASVEKGFVI 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A W E E +K TK + T +Q + E C SGKPA + + ++Y
Sbjct: 423 AHWDGTHETEALIKEETKATIRVIPTDEEYRQQYNMDEPGTCIRSGKPAAQKVVFAKAY 481
>sp|C4Z1D7|SYP_EUBE2 Proline--tRNA ligase OS=Eubacterium eligens (strain ATCC 27750 /
VPI C15-48) GN=proS PE=3 SV=1
Length = 479
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/477 (42%), Positives = 287/477 (60%), Gaps = 14/477 (2%)
Query: 36 ENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPLF 95
E+F +WY++V E++ Y + GC I +P +IWE ++ D K+ ++N Y P+F
Sbjct: 16 EDFAQWYTDVCKKAELMSYSSVKGCMIFKPAGYAIWENIKNEMDRRFKETGVENVYLPMF 75
Query: 96 VSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDLP 155
+ ++L+ EKDH+EGFAPEVAWVT G + L+ + +RPTSET+ +Y I+ +RDLP
Sbjct: 76 IPESLLEVEKDHVEGFAPEVAWVTYGGLNPLQERMCVRPTSETLFCDFYKDEIQSYRDLP 135
Query: 156 LKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEFL 215
NQWC+VVRWE PF+RSREFLWQEGHTA AT EA+ Q+L LY EE L
Sbjct: 136 KVYNQWCSVVRWE-KETRPFLRSREFLWQEGHTAHATAEEAEARTQQMLNLYADFCEEVL 194
Query: 216 AVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEKG 275
A+PVIKG+K++ EKFAG T T+EA + + G+ +Q TSH G F+K F I + ++
Sbjct: 195 AIPVIKGRKTDKEKFAGAEATYTIEALM-HDGKALQSGTSHNFGDGFAKAFGIQYTDKDN 253
Query: 276 EKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDAC 335
+ Q SW TTR IG ++M HGDD GLVLPP+VA VQV V+P+ K A G+ D
Sbjct: 254 KLKYVHQTSWGTTTRLIGAVIMTHGDDSGLVLPPKVAPVQVDVIPIMQKKA---GVLDKA 310
Query: 336 TATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDNG 395
+ L AG+ +D D +PGWK+S EM+G+P+R+E+GP+D+ NQ VRRD
Sbjct: 311 YEVGQALKAAGLRVKVDDSDK-NPGWKFSEQEMRGIPVRVEMGPRDIEANQAVIVRRDTR 369
Query: 396 AKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVE-ALGQRKMILAP 454
K+ + L +RI E+LD IQ+ + A+ R+A +DEF + A + I A
Sbjct: 370 EKITVSIDELADRIPEILDTIQKDMLERARAHREAHTYTALNYDEFKDTAANKAGFIKAM 429
Query: 455 WCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKRWSYWGRSY 511
WC ++ E +K T + C P Q ++ + +C GKPAK YWG++Y
Sbjct: 430 WCGDQACEDKIKEDT-----TCTSRCMPFAQEKLSD--VCVCCGKPAKAMVYWGKAY 479
>sp|Q5V5H0|SYP_HALMA Proline--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049 /
DSM 3752 / JCM 8966 / VKM B-1809) GN=proS PE=3 SV=1
Length = 484
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/488 (38%), Positives = 298/488 (61%), Gaps = 8/488 (1%)
Query: 25 ETGLGLSYKKDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKK 84
E LG++ K+ + GEWY+EVV + +Y + G + RP +IWE +Q D K
Sbjct: 4 EQELGITESKEHSPGEWYAEVVQKAGLADYAPMGGFIVTRPRGYAIWERIQNNLDGWFKD 63
Query: 85 MKIQNCYFPLFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYY 144
+QN YFPLF+ + L+KEKD +EGF PEVAWVT G ++LE +A+RPTSE+++ P+
Sbjct: 64 TGVQNAYFPLFIPESYLEKEKDVVEGFDPEVAWVTHGGHNELEERLAVRPTSESIIAPFM 123
Query: 145 SKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQIL 204
++W R HRDLP++LNQWC+VVRWE + PF R++EFLWQEGHTA A + A +E + L
Sbjct: 124 AQWTRSHRDLPMRLNQWCSVVRWEATETKPFFRTKEFLWQEGHTAHADEDGAWEETMTRL 183
Query: 205 ELYRRIYEEFLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSK 264
+ Y R+YEE +A+P +KG+K +KF G TTT+E +P+ G+ +Q ATSH LG +F +
Sbjct: 184 DQYARLYEEVMAMPPLKGRKPPHDKFPGAHTTTTIETLMPD-GKTVQAATSHYLGTSFGE 242
Query: 265 MFEIIFENEKGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYK 324
F+I + + E+ A SW + R +G ++M H DD+GLVLPP +A QV+VVP+ ++
Sbjct: 243 AFDITYADADEEENTAHTTSWGLSWRAMGALIMTHSDDQGLVLPPALAPDQVVVVPI-WQ 301
Query: 325 DADTQGIFDACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAK 384
+ + + D L EA + +D R++ +PG+KY+ E+ GVPLR+EIGP ++
Sbjct: 302 EDNKDEVIDYAADLAAELDEADVRVELDDREHRNPGFKYNEHELHGVPLRVEIGPHEVED 361
Query: 385 NQVRAVRRDNGAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEA 444
+ V R +G + R + + + + LD + L+ +A++ + I+ ++ +E +
Sbjct: 362 GEATLVHRPDGETETVDRDGIADTVTDHLDTVHAKLYASAEETLEGEIREAESREEILGT 421
Query: 445 LGQR-KMILAPWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQPEIPEGTLCFASGKPAKR 503
+GQ + WC +E+ E+ +K + AA+ + PL++ E P C G+ A+
Sbjct: 422 IGQHGGYVKCGWCGDEDCEEPIK-----DAIAAEIVMVPLDRDEEPIHEDCAICGEDAEE 476
Query: 504 WSYWGRSY 511
+Y+ +SY
Sbjct: 477 TAYFAKSY 484
>sp|C4ZC24|SYP_EUBR3 Proline--tRNA ligase OS=Eubacterium rectale (strain ATCC 33656 /
VPI 0990) GN=proS PE=3 SV=1
Length = 479
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 195/480 (40%), Positives = 293/480 (61%), Gaps = 18/480 (3%)
Query: 35 DENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFPL 94
+E+F +WY++VV E+++Y + GC I +P +IWE +QK DA K+ ++N Y P+
Sbjct: 15 EEDFTQWYTDVVKKAELMDYSSVKGCMIFKPNGYAIWENIQKNLDAMFKETGVENVYMPM 74
Query: 95 FVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRDL 154
F+ ++LQKEKDH+EGFAPEVAWVT+ G L+ +A+RPTSET+ +SK ++ HRDL
Sbjct: 75 FIPESLLQKEKDHVEGFAPEVAWVTQGGLETLQERLAVRPTSETLFCELFSKTVQSHRDL 134
Query: 155 PLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEEF 214
P NQWC+VVRWE PF+RS EFLWQEGHT AT EA+ +Q+L +Y E++
Sbjct: 135 PKVYNQWCSVVRWE-KTTRPFLRSSEFLWQEGHTVHATAEEAEARTVQMLNIYADFCEKY 193
Query: 215 LAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENEK 274
LA+P++KG+K++ EKFAG T T+EA + + G+ +Q TSH G F K F I + ++
Sbjct: 194 LAIPMVKGRKTDKEKFAGAEATYTIEALM-HDGKALQSGTSHNFGDGFPKAFGIQYTDKD 252
Query: 275 GEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFDA 334
+ + SW +TR IG ++MVHGDD GLVLPP++A QV+V+P+ + G+ D
Sbjct: 253 NKLQYCHETSWGVSTRLIGAIIMVHGDDSGLVLPPKIAPTQVMVIPIQQQ---KDGVLDK 309
Query: 335 CTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRDN 394
+ L + +D+ D +PGWK++ E++G+ RIEIGPKD+ KNQ VRRD
Sbjct: 310 AYDLKDKLSK-DFRVKIDATDK-TPGWKFAAQEVQGISTRIEIGPKDIEKNQCVIVRRDT 367
Query: 395 GAKVDLPRSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRK--MIL 452
K+ + + E++ E+L+ +Q + AK + I ++EF +A+ + K I
Sbjct: 368 REKIVVSLDEVNEKLAEVLETMQNDMLEKAKAFLASHINDAHDYNEF-KAIAETKPGFIR 426
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPL-EQPEIPEGTLCFASGKPAKRWSYWGRSY 511
A WC +E E +K T + C P +Q +I + +C GKPA + YWG++Y
Sbjct: 427 AMWCGDEACENKIKEDT-----TVTSRCMPFGDQEQISD--VCVCCGKPAHKLVYWGKAY 479
>sp|B3QYP1|SYP_CHLT3 Proline--tRNA ligase OS=Chloroherpeton thalassium (strain ATCC
35110 / GB-78) GN=proS PE=3 SV=1
Length = 481
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/484 (40%), Positives = 295/484 (60%), Gaps = 16/484 (3%)
Query: 34 KDENFGEWYSEVVVNGEMIEYYDISGCYIIRPWAMSIWETMQKFFDAEIKKMKIQNCYFP 93
+ +++ +WY ++V ++ +Y D+ GC +IRP +IWE MQ D K+ N YFP
Sbjct: 8 RAQDYSQWYIDIVRFAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNAYFP 67
Query: 94 LFVSPTVLQKEKDHIEGFAPEVAWVTKSGESDLEVPIAIRPTSETVMYPYYSKWIRGHRD 153
LF+ + +QKE +HIEGFAPE A VT G +L+ + +RPTSET+++ Y KWI+ +RD
Sbjct: 68 LFIPESFIQKEAEHIEGFAPECAVVTHGGGEELQEKLYVRPTSETIIWSSYKKWIQSYRD 127
Query: 154 LPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKSEADDEVLQILELYRRIYEE 213
LP+ +NQW NVVRWE F+R+ EFLWQEGHTA AT++EA +EVL+++E+YR EE
Sbjct: 128 LPILINQWANVVRWEMRTRL-FLRTTEFLWQEGHTAHATETEAKEEVLRMIEVYRHFAEE 186
Query: 214 FLAVPVIKGKKSELEKFAGGLYTTTVEAFIPNTGRGIQGATSHCLGQNFSKMFEIIFENE 273
++A+PVI G K+E EKFAG T +EA + + G+ +Q TSH LGQNF+K F+ F+ +
Sbjct: 187 YMAIPVIVGMKTESEKFAGAHETFCIEAMMQD-GKALQAGTSHHLGQNFAKAFDCKFQTK 245
Query: 274 KGEKAMAWQNSWAYTTRTIGVMVMVHGDDKGLVLPPRVASVQVIVVPVPYKDADTQGIFD 333
G W +SW +TR IG ++M H DDKGLVLPP++AS Q ++VP+ D + +
Sbjct: 246 DGSLEYVWASSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQAVIVPIL--KGDKAAVLE 303
Query: 334 ACTATVETLCEAGICANMDSRDNYSPGWKYSHWEMKGVPLRIEIGPKDLAKNQVRAVRRD 393
+ L AG+ +D + +PGWK++ +E++G+P+RIE+GP+D+A + RRD
Sbjct: 304 KAVELEKMLKAAGVQVFLDDSEQNTPGWKFAEYELQGIPVRIELGPRDVAAGKCVVARRD 363
Query: 394 NGAKVDLP-RSSLVERIKELLDEIQESLFVAAKQRRDACIQIVKTWDEFVEALGQRKMIL 452
K L ++ ++IK+LLD IQ LF A + R+ ++V T++E ++A + +
Sbjct: 364 TSEKETLEIDTAFPQKIKDLLDSIQTGLFERALRFREEKTKVVTTYEE-LKAQVEVGFAV 422
Query: 453 APWCDEEEVEKDVKARTKGEMGAAKTLCSPLEQP-----EIPEGTLCFASGKPAKRWSYW 507
A W E E +K TK A C P+ + I C SG P+K+ +
Sbjct: 423 AHWDGTPETEAKIKEETK-----ATIRCLPVSKDFATKYGINTEGKCVFSGNPSKQMVVF 477
Query: 508 GRSY 511
++Y
Sbjct: 478 AKAY 481
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,942,005
Number of Sequences: 539616
Number of extensions: 8985437
Number of successful extensions: 26610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 738
Number of HSP's that attempted gapping in prelim test: 24015
Number of HSP's gapped (non-prelim): 2208
length of query: 511
length of database: 191,569,459
effective HSP length: 122
effective length of query: 389
effective length of database: 125,736,307
effective search space: 48911423423
effective search space used: 48911423423
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)