Query 010417
Match_columns 511
No_of_seqs 289 out of 1433
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 00:17:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010417.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010417hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1379 Serine/threonine prote 100.0 6.9E-47 1.5E-51 378.9 24.8 244 253-496 70-330 (330)
2 PLN03145 Protein phosphatase 2 100.0 8.3E-34 1.8E-38 296.6 27.2 207 261-499 67-332 (365)
3 COG0631 PTC1 Serine/threonine 100.0 1.6E-32 3.5E-37 275.3 24.0 209 259-500 8-255 (262)
4 PTZ00224 protein phosphatase 2 100.0 3E-31 6.5E-36 278.6 26.1 212 256-504 21-278 (381)
5 PRK14559 putative protein seri 100.0 4.8E-29 1E-33 275.8 29.3 215 259-501 375-639 (645)
6 cd00143 PP2Cc Serine/threonine 100.0 1.2E-28 2.7E-33 239.4 23.1 206 262-496 3-254 (254)
7 smart00332 PP2Cc Serine/threon 100.0 2E-27 4.4E-32 232.2 23.4 201 265-494 11-255 (255)
8 KOG0698 Serine/threonine prote 100.0 1.3E-27 2.7E-32 247.3 23.0 209 266-502 46-309 (330)
9 KOG0697 Protein phosphatase 1B 100.0 4.6E-28 1E-32 239.0 16.0 212 257-499 22-293 (379)
10 PF00481 PP2C: Protein phospha 100.0 1.9E-28 4.2E-33 243.0 9.9 189 265-459 5-247 (254)
11 KOG0699 Serine/threonine prote 99.9 5.1E-22 1.1E-26 202.0 17.8 141 342-499 330-505 (542)
12 KOG0700 Protein phosphatase 2C 99.8 1.4E-20 3E-25 195.0 16.4 183 274-461 85-378 (390)
13 KOG1323 Serine/threonine phosp 99.8 9.1E-19 2E-23 176.9 17.2 202 282-498 143-488 (493)
14 PF13672 PP2C_2: Protein phosp 99.7 1.7E-17 3.8E-22 159.1 13.0 168 264-440 3-195 (212)
15 smart00331 PP2C_SIG Sigma fact 99.7 2.7E-16 5.9E-21 148.7 20.8 168 271-458 14-192 (193)
16 TIGR02865 spore_II_E stage II 99.7 6.1E-15 1.3E-19 167.8 21.4 204 250-496 545-763 (764)
17 PF07228 SpoIIE: Stage II spor 99.6 4.6E-13 1E-17 126.1 20.3 174 283-497 4-193 (193)
18 COG2208 RsbU Serine phosphatas 98.8 4.7E-07 1E-11 95.2 20.1 186 273-497 161-366 (367)
19 KOG0618 Serine/threonine phosp 98.8 3.1E-08 6.7E-13 112.3 11.2 187 282-504 550-779 (1081)
20 PRK10693 response regulator of 77.3 28 0.0006 35.8 11.5 99 273-374 149-259 (303)
21 PF09436 DUF2016: Domain of un 31.6 25 0.00054 29.2 1.2 16 411-426 25-40 (72)
22 COG3700 AphA Acid phosphatase 28.7 1.1E+02 0.0023 30.2 5.0 50 411-460 69-129 (237)
23 PF06972 DUF1296: Protein of u 26.0 1E+02 0.0023 24.7 3.7 26 427-455 19-44 (60)
No 1
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-47 Score=378.88 Aligned_cols=244 Identities=50% Similarity=0.749 Sum_probs=224.0
Q ss_pred cceEEEEEEEecCCCCCCCCCCCceEEe---cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHH
Q 010417 253 KTLKLLSGACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPAR 329 (511)
Q Consensus 253 ~~lrl~~gs~~~s~~Gk~R~~NEDa~~V---~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e 329 (511)
..++...+.+..+++-++.+.+||+||+ ....++|||||+|||+..|++++.|+++||.++.+.+.+......+|..
T Consensus 70 t~~~~~~~~~~~~~~~~~~~~GEDa~Fvss~~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~ 149 (330)
T KOG1379|consen 70 TSLCGFSKDFIRPHPSKVGKGGEDAWFVSSNPHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVN 149 (330)
T ss_pred hhhccccccccCCccccCCCCCCcceeeccCcccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHH
Confidence 4445556777788899999999999999 3788999999999999999999999999999998888877666678999
Q ss_pred HHHHHHHccCcC-----CCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccccCCccceecCC------C
Q 010417 330 VLEKAHSSTRAK-----GSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGS------N 396 (511)
Q Consensus 330 ~L~~A~~~~~~~-----GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n~p~qL~~g~------~ 396 (511)
+|.++|.+.+.. |+||||++++. +++||+||+|||.+.++|+|++++.|.+|+|+||.||||+.+. .
T Consensus 150 lL~~ay~~l~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~~p~~~~~~~ 229 (330)
T KOG1379|consen 150 LLEKAYAELKSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSSPPEGYSSYI 229 (330)
T ss_pred HHHHHHHHHhhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeeccCCccccccc
Confidence 999999987655 99999999999 6799999999999999999999999999999999999998754 4
Q ss_pred CCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhhccccCCCCcchhhhh
Q 010417 397 SDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMR-AGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQ 475 (511)
Q Consensus 397 ~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~-~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~ 475 (511)
.+.|...++.++++++||+|||+||||||+|.+++|.+++..... ...++|.+|++|++.|.+++.|++++|||+.+|+
T Consensus 230 ~d~p~~ad~~~~~v~~GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar 309 (330)
T KOG1379|consen 230 SDVPDSADVTSFDVQKGDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAR 309 (330)
T ss_pred cCCccccceEEEeccCCCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHH
Confidence 788888999999999999999999999999999999999998766 5678999999999999999999999999999999
Q ss_pred hcccccCCCCcCCeEEEEEEE
Q 010417 476 DAGFRYYGGKLDDITVVVSYI 496 (511)
Q Consensus 476 ~~g~~~~~Gs~DNITVIVV~i 496 (511)
+.|+++++|+.||||||+.++
T Consensus 310 ~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 310 EHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HhCcccCCCCcccEEEEEecC
Confidence 999999999999999999864
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=8.3e-34 Score=296.64 Aligned_cols=207 Identities=18% Similarity=0.225 Sum_probs=159.5
Q ss_pred EEecCCCCCCCCCCCceEEe-cC--------------CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCC
Q 010417 261 ACCLPHPDKEETGGEDAHFI-SD--------------KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSI 325 (511)
Q Consensus 261 s~~~s~~Gk~R~~NEDa~~V-~d--------------~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~ 325 (511)
+...+++|. |+.|||++++ .+ ..+|+|||||||+. ++++|++.+...+.. ......
T Consensus 67 ~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~-----age~as~~l~~~i~~---~~~~~~ 137 (365)
T PLN03145 67 SGAWADIGS-RSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKH-----AADFACYHLPRFIVE---DEDFPR 137 (365)
T ss_pred EEEEccccC-CCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHH-----HHHHHHHHHHHHHHh---hhccch
Confidence 344899995 9999999986 31 47999999999999 999999887765543 111122
Q ss_pred CHHHHHHHHHHcc------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCcccccccC-------
Q 010417 326 DPARVLEKAHSST------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFN------- 386 (511)
Q Consensus 326 ~~~e~L~~A~~~~------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n------- 386 (511)
+..++|++++.++ ....|||++++++.++.++|+|+||||+|++|+|+++++|++|.....
T Consensus 138 ~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~ 217 (365)
T PLN03145 138 EIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIE 217 (365)
T ss_pred hHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHH
Confidence 3445565555432 123579999999999999999999999999999999999998853110
Q ss_pred ------------Cccceec--CCC----------CCCCCcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHh
Q 010417 387 ------------FTYQLEY--GSN----------SDLPSSGQVFTIPVAPGD-VIIAGTDGLFDNLYNNEITAVVVHAMR 441 (511)
Q Consensus 387 ------------~p~qL~~--g~~----------~d~p~~pdV~~i~L~~gD-~LVL~SDGLwD~Ls~eEI~~iV~~~l~ 441 (511)
....++. |.. .....+|++..++++++| |||||||||||+|+++|+++++.+.+.
T Consensus 218 ~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~ 297 (365)
T PLN03145 218 ASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQ 297 (365)
T ss_pred HcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHh
Confidence 0001111 110 012347899999999877 667999999999999999999988777
Q ss_pred CCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecC
Q 010417 442 AGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNC 499 (511)
Q Consensus 442 ~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~ 499 (511)
...+|+++|+.|+++|++ +|+.||||||||++...
T Consensus 298 ~~~~p~~aa~~Lv~~Al~-----------------------rgs~DNITvIVV~l~~~ 332 (365)
T PLN03145 298 EHNDPVMCSKELVDEALK-----------------------RKSGDNLAVVVVCFQSQ 332 (365)
T ss_pred cCCCHHHHHHHHHHHHHh-----------------------CCCCCCEEEEEEEeecC
Confidence 667899999999999999 78999999999999974
No 3
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=275.30 Aligned_cols=209 Identities=25% Similarity=0.345 Sum_probs=162.0
Q ss_pred EEEEecCCCCCCCCCCCceEEe-cC-----CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCC-CCCCC--HHH
Q 010417 259 SGACCLPHPDKEETGGEDAHFI-SD-----KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEP-DGSID--PAR 329 (511)
Q Consensus 259 ~gs~~~s~~Gk~R~~NEDa~~V-~d-----~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~-~~~~~--~~e 329 (511)
.-.++++++|..|..|||++++ .+ ..+++||||||||+ +|++|++++...+.....+. ..... ..+
T Consensus 8 ~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~-----~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~ 82 (262)
T COG0631 8 LKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHA-----AGEVASKLAVEALARLFDETNFNSLNESLEE 82 (262)
T ss_pred eeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchh-----HHHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 3445599999999999999999 32 24999999999999 99999988887776553332 22222 344
Q ss_pred HHHHHHHcc------------C-cCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCcccccc------------
Q 010417 330 VLEKAHSST------------R-AKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD------------ 384 (511)
Q Consensus 330 ~L~~A~~~~------------~-~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~------------ 384 (511)
.|.+++... . ...|||++++++.++++++|||||||+|++|+|++.++|++|...
T Consensus 83 ~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~ 162 (262)
T COG0631 83 LLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPE 162 (262)
T ss_pred HHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHH
Confidence 444432211 1 223488888889999999999999999999999999999998421
Q ss_pred --cCCccc--eecCCCCCCC-CcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Q 010417 385 --FNFTYQ--LEYGSNSDLP-SSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQ 459 (511)
Q Consensus 385 --~n~p~q--L~~g~~~d~p-~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~ 459 (511)
...|.. ++. ..++.+ ..|++...+++++|++|||||||||.++++||++++... .+++++++.|++.|.+
T Consensus 163 ~~~~~~~~~~ltr-alG~~~~~~p~~~~~~~~~~d~llL~SDGl~d~v~~~~i~~il~~~----~~~~~~~~~li~~a~~ 237 (262)
T COG0631 163 EARSHPRRNALTR-ALGDFDLLEPDITELELEPGDFLLLCSDGLWDVVSDDEIVDILKNS----ETPQEAADKLIELALE 237 (262)
T ss_pred HHHhCccchhhhh-hcCCCcccceeEEEEEcCCCCEEEEECCCCccCcCHHHHHHHHhcC----CCHHHHHHHHHHHHHh
Confidence 112221 211 223333 678999999999999999999999999999999999862 6899999999999999
Q ss_pred hccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCC
Q 010417 460 RAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCE 500 (511)
Q Consensus 460 ~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~ 500 (511)
+|+.||||+++|++....
T Consensus 238 -----------------------~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 238 -----------------------GGGPDNITVVLVRLNGEG 255 (262)
T ss_pred -----------------------cCCCCceEEEEEEeeccc
Confidence 799999999999988764
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=3e-31 Score=278.62 Aligned_cols=212 Identities=22% Similarity=0.290 Sum_probs=157.0
Q ss_pred EEEEEEEecCCCCCCCCCCCceEEe---cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHH
Q 010417 256 KLLSGACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLE 332 (511)
Q Consensus 256 rl~~gs~~~s~~Gk~R~~NEDa~~V---~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~ 332 (511)
.+.+|+ .+++|. |+.|||++++ .+..+|+|||||||.. ++.++.+.+...+. ..... .. .+.|+
T Consensus 21 ~~~~g~--~s~~G~-R~~nED~~~v~~~~~~~lfgVfDGHgG~~-----~S~~~~~~l~~~l~---~~~~~-~~-~~~l~ 87 (381)
T PTZ00224 21 IFRCAS--ACVNGY-RESMEDAHLLYLTDDWGFFGVFDGHVNDE-----CSQYLARAWPQALE---KEPEP-MT-DERME 87 (381)
T ss_pred cEEEEE--EeCCCC-CCCCCCeeEeccCCCceEEEEEeCCCcHH-----HHHHHHHHHHHHHH---hcccc-cc-HHHHH
Confidence 345555 778886 9999999886 3557999999999987 67777666554332 22111 11 12233
Q ss_pred HHHH-------ccCcCCCceEEEEEEe-CCeEEEEEEcCCcEEEEeCCeEEEcCccccccc-------------CCcc--
Q 010417 333 KAHS-------STRAKGSSTACIIALT-DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF-------------NFTY-- 389 (511)
Q Consensus 333 ~A~~-------~~~~~GGSTavvalI~-~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~-------------n~p~-- 389 (511)
+++. +....+|||++++++. +++++|+||||||+|++|+|+++++|++|.... ..+.
T Consensus 88 ~a~~~~d~~i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~Rv 167 (381)
T PTZ00224 88 ELCLEIDEEWMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVSNRV 167 (381)
T ss_pred HHHHHHHHHHHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEeccccc
Confidence 3322 2234567999988776 568999999999999999999999999984311 0111
Q ss_pred ----ceecCCCCCC---------------CCcceEEEEecCCCCEEEEEccCCCC-CCCHHHHHHHHHHHHhCCCCHHHH
Q 010417 390 ----QLEYGSNSDL---------------PSSGQVFTIPVAPGDVIIAGTDGLFD-NLYNNEITAVVVHAMRAGLGPQVT 449 (511)
Q Consensus 390 ----qL~~g~~~d~---------------p~~pdV~~i~L~~gD~LVL~SDGLwD-~Ls~eEI~~iV~~~l~~g~~~q~a 449 (511)
.++. ..++. ..+|++..++++++|+|||||||||| +++++|+.+++.+.+....+++++
T Consensus 168 ~G~l~vTR-alGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~a 246 (381)
T PTZ00224 168 DGDLAVSR-AFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVV 246 (381)
T ss_pred cCceeeec-ccCCcccccccccccccCcceeeeEEEEEECCCCCEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHH
Confidence 1211 11121 14689999999999999999999999 899999999998776666789999
Q ss_pred HHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCCCccc
Q 010417 450 AQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCEDVCS 504 (511)
Q Consensus 450 A~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~~~~~ 504 (511)
|+.|+++|+. +|+.||||||||++....+.+.
T Consensus 247 A~~Lv~~A~~-----------------------rGs~DNITvIvV~~~~~~~~~~ 278 (381)
T PTZ00224 247 AGRVCDEAIR-----------------------RGSKDNISCLIVQLKDGASYAK 278 (381)
T ss_pred HHHHHHHHHh-----------------------cCCCCCEEEEEEEeeCCCChhh
Confidence 9999999999 7899999999999998875543
No 5
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.97 E-value=4.8e-29 Score=275.82 Aligned_cols=215 Identities=17% Similarity=0.219 Sum_probs=154.2
Q ss_pred EEEEecCCCCCCCCCCCceEEe-c--------------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcC-CC
Q 010417 259 SGACCLPHPDKEETGGEDAHFI-S--------------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEE-PD 322 (511)
Q Consensus 259 ~gs~~~s~~Gk~R~~NEDa~~V-~--------------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~-~~ 322 (511)
+-.++.+|+|++|+.|||++.+ . +..+|+|||||||+. +|++|++++...+..+... ..
T Consensus 375 l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~-----~GevAS~lAv~~L~~~~~~~~~ 449 (645)
T PRK14559 375 LEDAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHA-----AGEVASALAVETLQQYFQQHWQ 449 (645)
T ss_pred EEEEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCch-----hHHHHHHHHHHHHHHHHHhhhc
Confidence 4445699999999999999876 2 246899999999999 8999998877766543321 11
Q ss_pred CCCCHHHHHHHHHHcc---------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEE-eCCeEEEcCcccccc--
Q 010417 323 GSIDPARVLEKAHSST---------------RAKGSSTACIIALTDQGLRAINLGDSGFVVV-RDGCTVFRSPVQQHD-- 384 (511)
Q Consensus 323 ~~~~~~e~L~~A~~~~---------------~~~GGSTavvalI~~~~L~VANVGDSRayLi-RdG~li~lS~~q~~~-- 384 (511)
......+.|++++..+ ....|||++++++.+++++++||||||+|++ |+|++.++|.||...
T Consensus 450 ~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~ 529 (645)
T PRK14559 450 DELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQR 529 (645)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHH
Confidence 1122333344433211 1124699999999999999999999999998 578999999998431
Q ss_pred -----------cCCc--cceec--CCCCCCCCcceEEEEecCCCCEEEEEccCCCCC-CCHHHHHHHHHHHHhCCCCHHH
Q 010417 385 -----------FNFT--YQLEY--GSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDN-LYNNEITAVVVHAMRAGLGPQV 448 (511)
Q Consensus 385 -----------~n~p--~qL~~--g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~-Ls~eEI~~iV~~~l~~g~~~q~ 448 (511)
...+ +.|.. |.......+|++..+++++||+||||||||||+ +.++++.+.+...+....++++
T Consensus 530 lv~~Gi~~~~a~~~p~~~~LTrALG~~~~~~l~Pdi~~~~L~~gD~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~ 609 (645)
T PRK14559 530 EIQRGVEPQIAYARPDAYQLTQALGPRDNSAIQPDIQFLEIEEDTLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQ 609 (645)
T ss_pred HHHhCCCHHHHhcCcccceeeeccCCCCCCcccceEEEEEcCCCCEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHH
Confidence 1112 12322 211111236899999999999999999999995 3343444444444555578999
Q ss_pred HHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCCC
Q 010417 449 TAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 449 aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
++++|++.|+. +|+.||||+|||++....+
T Consensus 610 aa~~Li~~Al~-----------------------~gg~DNITvIvV~l~~~p~ 639 (645)
T PRK14559 610 GLNKLIDLANQ-----------------------YNGHDNITAILVRLKVRPQ 639 (645)
T ss_pred HHHHHHHHHHH-----------------------cCCCCcEEEEEEEeccCCC
Confidence 99999999998 6899999999999976543
No 6
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=1.2e-28 Score=239.42 Aligned_cols=206 Identities=28% Similarity=0.345 Sum_probs=154.2
Q ss_pred EecCCCCCCCCCCCceEEe-c-----CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHH
Q 010417 262 CCLPHPDKEETGGEDAHFI-S-----DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDG--SIDPARVLEK 333 (511)
Q Consensus 262 ~~~s~~Gk~R~~NEDa~~V-~-----d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~--~~~~~e~L~~ 333 (511)
++.++.++.|+.|||++++ . +..+|+|||||||+. .+++|++++...+......... ...+...|++
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 77 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHA-----AGEFASKLLVEELLEELEETLTLSEEDIEEALRK 77 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHH-----HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHH
Confidence 3456677789999999998 3 568999999999998 8888888877666544332210 1223344444
Q ss_pred HHHcc-------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccccc---------------
Q 010417 334 AHSST-------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF--------------- 385 (511)
Q Consensus 334 A~~~~-------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~--------------- 385 (511)
++.+. ...+|||++++++.++.++++|+||||+|++|++++.++|.+|....
T Consensus 78 ~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~ 157 (254)
T cd00143 78 AFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS 157 (254)
T ss_pred HHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE
Confidence 43221 14567999999999999999999999999999999999998875431
Q ss_pred --CCcccee-cCCCCC------CCCcceEEEEec-CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010417 386 --NFTYQLE-YGSNSD------LPSSGQVFTIPV-APGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAA 455 (511)
Q Consensus 386 --n~p~qL~-~g~~~d------~p~~pdV~~i~L-~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~ 455 (511)
+.+.+.. ....+. ...+|++..+++ +++|+||||||||||++++++|.+++...... .+++++|+.|++
T Consensus 158 ~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~-~~~~~~a~~l~~ 236 (254)
T cd00143 158 NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAK-EDLQEAAQELVD 236 (254)
T ss_pred eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcc-cCHHHHHHHHHH
Confidence 1122211 011111 234678999999 99999999999999999999999999876211 279999999999
Q ss_pred HHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEE
Q 010417 456 LARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYI 496 (511)
Q Consensus 456 ~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i 496 (511)
.|.. .++.||+|+|++++
T Consensus 237 ~a~~-----------------------~~~~Dn~t~i~~~~ 254 (254)
T cd00143 237 LALR-----------------------RGSHDNITVVVVRL 254 (254)
T ss_pred HHHh-----------------------CCCCCCEEEEEEeC
Confidence 9998 67889999999875
No 7
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=2e-27 Score=232.15 Aligned_cols=201 Identities=27% Similarity=0.328 Sum_probs=151.7
Q ss_pred CCCCCCCCCCCceEEe-c----CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHHcc
Q 010417 265 PHPDKEETGGEDAHFI-S----DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDG-SIDPARVLEKAHSST 338 (511)
Q Consensus 265 s~~Gk~R~~NEDa~~V-~----d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~-~~~~~e~L~~A~~~~ 338 (511)
++.++.|..|||++++ . +..+++|||||||.. ++.++.+.+...+......... ...+.+.|++++...
T Consensus 11 ~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 11 SSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSE-----AAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred ecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 6678899999999988 2 356999999999888 8888888877665544322211 123555565554332
Q ss_pred -------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccc-------------------ccC
Q 010417 339 -------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQH-------------------DFN 386 (511)
Q Consensus 339 -------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~-------------------~~n 386 (511)
...+|||++++++.++.++++|+||||+|++|++++.++|.+|.. ..+
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~~~~ 165 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVINGRVN 165 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECCeEC
Confidence 123579999999999999999999999999999999999988865 222
Q ss_pred CccceecCCCC-----CCCCcceEEEEec-CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 010417 387 FTYQLEYGSNS-----DLPSSGQVFTIPV-APGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQR 460 (511)
Q Consensus 387 ~p~qL~~g~~~-----d~p~~pdV~~i~L-~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~ 460 (511)
....++...+. ....+|++...++ +++|+||||||||||+++++++.+++.+.... .+++++|+.|++.|..
T Consensus 166 ~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~-~~~~~~~~~l~~~a~~- 243 (255)
T smart00332 166 GVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSK-SDPEEAAKRLIDLALA- 243 (255)
T ss_pred CeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhc-CCHHHHHHHHHHHHHH-
Confidence 22223221111 1123578888885 89999999999999999999999999876322 2689999999999998
Q ss_pred ccccCCCCcchhhhhhcccccCCCCcCCeEEEEE
Q 010417 461 AQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVS 494 (511)
Q Consensus 461 a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV 494 (511)
++..||+|+||+
T Consensus 244 ----------------------~~~~Dn~T~ivv 255 (255)
T smart00332 244 ----------------------RGSKDNITVIVV 255 (255)
T ss_pred ----------------------cCCCCCeEEEEC
Confidence 688899999985
No 8
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-27 Score=247.26 Aligned_cols=209 Identities=24% Similarity=0.297 Sum_probs=157.0
Q ss_pred CCCCCCCCCCceEEe-c-----------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 010417 266 HPDKEETGGEDAHFI-S-----------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEK 333 (511)
Q Consensus 266 ~~Gk~R~~NEDa~~V-~-----------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~ 333 (511)
..++.|..|||.+.. . +..+|||||||||.. +++|+++.+...+...........+..+.+++
T Consensus 46 ~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~-----~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~ 120 (330)
T KOG0698|consen 46 SIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDL-----AAKFAAKHLHKNLLEQLAFPKDRQDVKDALRR 120 (330)
T ss_pred ecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHH-----HHHHHHHHHHHHHHhhhhcccchHHHHHHHHH
Confidence 345678899999887 1 257999999999999 99999877665544333222211235667777
Q ss_pred HHH-cc----------CcCCCceEEEEEEeCC-eEEEEEEcCCcEEEEeCC-eEEEcCccccccc---------------
Q 010417 334 AHS-ST----------RAKGSSTACIIALTDQ-GLRAINLGDSGFVVVRDG-CTVFRSPVQQHDF--------------- 385 (511)
Q Consensus 334 A~~-~~----------~~~GGSTavvalI~~~-~L~VANVGDSRayLiRdG-~li~lS~~q~~~~--------------- 385 (511)
+|. ++ ...+|||++++++.++ +|+|||+|||||+|+++| ..+.+|.+|....
T Consensus 121 ~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~ 200 (330)
T KOG0698|consen 121 AFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVS 200 (330)
T ss_pred HHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEE
Confidence 766 22 2567899988888865 999999999999999866 7889998884310
Q ss_pred --CC-cc---cee--c--CC---C-CCCCCcceEEEEecCC-CCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHH
Q 010417 386 --NF-TY---QLE--Y--GS---N-SDLPSSGQVFTIPVAP-GDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTA 450 (511)
Q Consensus 386 --n~-p~---qL~--~--g~---~-~d~p~~pdV~~i~L~~-gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA 450 (511)
.. ++ .|. . |. . .....+|++...++.+ ++||||+||||||+|+++|++++|+..+.....+..++
T Consensus 201 ~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~ 280 (330)
T KOG0698|consen 201 NWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAA 280 (330)
T ss_pred EcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHH
Confidence 00 11 111 1 11 0 2234578999999986 66999999999999999999999998764446889999
Q ss_pred HHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCCCc
Q 010417 451 QKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCEDV 502 (511)
Q Consensus 451 ~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~~~ 502 (511)
+.|.+.|.. +++.||||||||+|......
T Consensus 281 ~~l~~~a~~-----------------------~~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 281 KLLATEALS-----------------------RGSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred HHHHHHHhh-----------------------cCCCCCeEEEEEEecCcccc
Confidence 999999988 79999999999999988643
No 9
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-28 Score=239.00 Aligned_cols=212 Identities=19% Similarity=0.285 Sum_probs=152.4
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe--------cCCeEEEEEcCCCCCCCCCCCHHHH-HHHHHHHHHH--HHHcCCC-C-
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI--------SDKQAIGVADGVGGWANHGVNAGLY-SRELMSNSVA--AIQEEPD-G- 323 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V--------~d~~lfgVaDGhGG~a~sg~~Ag~~-As~l~~~~l~--~l~~~~~-~- 323 (511)
|.+|...+ -+.|-.|||++.. .++.||||||||.|+.. +.. |..|+..++. .+..... +
T Consensus 22 lryg~SSM---QGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~v-----a~~c~~hLlehi~sse~F~~~~k~gs 93 (379)
T KOG0697|consen 22 LRYGVSSM---QGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQV-----ANHCAEHLLEHIISSEEFRGMTKNGS 93 (379)
T ss_pred eeeeeccc---cchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHH-----HHHHHHHHHHHhhhhHHHhhhccCCc
Confidence 55665444 4799999999976 37999999999999984 333 3344444332 2222111 1
Q ss_pred -----------CCCHHHHHHHHHHcc--CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccccc-----
Q 010417 324 -----------SIDPARVLEKAHSST--RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF----- 385 (511)
Q Consensus 324 -----------~~~~~e~L~~A~~~~--~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~----- 385 (511)
-....+.++...... ...+||||+++++...++|++|+||||++|+|+|+.++-|.+|....
T Consensus 94 v~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~Eke 173 (379)
T KOG0697|consen 94 VENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKE 173 (379)
T ss_pred HHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHH
Confidence 011122233222211 24488999999999999999999999999999999999888874321
Q ss_pred --------------CCccceec--CC------------CCCCCCcceEEEEecC-CCCEEEEEccCCCCCCCHHHHHHHH
Q 010417 386 --------------NFTYQLEY--GS------------NSDLPSSGQVFTIPVA-PGDVIIAGTDGLFDNLYNNEITAVV 436 (511)
Q Consensus 386 --------------n~p~qL~~--g~------------~~d~p~~pdV~~i~L~-~gD~LVL~SDGLwD~Ls~eEI~~iV 436 (511)
|.....+. |. ..-...+|+++.++-+ ++|||||+|||+||+|+++|++++|
T Consensus 174 RIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv 253 (379)
T KOG0697|consen 174 RIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFV 253 (379)
T ss_pred HHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHH
Confidence 11111110 10 0112236888887765 7789999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecC
Q 010417 437 VHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNC 499 (511)
Q Consensus 437 ~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~ 499 (511)
+..+....++.++|+.+++.++- .|++||||+|++.|...
T Consensus 254 ~sRl~Vt~dL~~vcn~VvDtCLh-----------------------KGSRDNMsivlvcfp~A 293 (379)
T KOG0697|consen 254 KSRLEVTSDLEEVCNDVVDTCLH-----------------------KGSRDNMSIVLVCFPGA 293 (379)
T ss_pred HhhheecccHHHHHHHHHHHHHh-----------------------ccCccCceEEEEecCCC
Confidence 99988888999999999999998 79999999999998754
No 10
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.95 E-value=1.9e-28 Score=243.03 Aligned_cols=189 Identities=25% Similarity=0.329 Sum_probs=136.8
Q ss_pred CCCCCCCCCCCceEEe-c---------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHH
Q 010417 265 PHPDKEETGGEDAHFI-S---------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKA 334 (511)
Q Consensus 265 s~~Gk~R~~NEDa~~V-~---------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A 334 (511)
+...+.|+.|||.+++ . +..+|+|||||||.. ++++++..+...+......... .+..+.|..+
T Consensus 5 ~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~-----~a~~~~~~l~~~l~~~~~~~~~-~~~~~al~~a 78 (254)
T PF00481_consen 5 SSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSE-----AAEYASQNLPEFLKENLSFNDG-NDIEEALRQA 78 (254)
T ss_dssp EEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSH-----HHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHH
T ss_pred ecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChh-----hHHHHHHHHHHHHHhhcccccc-cchhhcccce
Confidence 3445789999999998 2 357999999999999 8999998888655544332211 0344555554
Q ss_pred HHc-------------cCcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEE-EcCcccccc----------------
Q 010417 335 HSS-------------TRAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTV-FRSPVQQHD---------------- 384 (511)
Q Consensus 335 ~~~-------------~~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li-~lS~~q~~~---------------- 384 (511)
|.+ ....+|||+++++|.++++++||+||||+||++++... ++|.+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~ 158 (254)
T PF00481_consen 79 FLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVS 158 (254)
T ss_dssp HHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEE
T ss_pred eeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeeccccccc
Confidence 443 23567899999999999999999999999999999988 999888421
Q ss_pred ----cCCc----cceecCCC-----CCCCCcceEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHH
Q 010417 385 ----FNFT----YQLEYGSN-----SDLPSSGQVFTIPVAPGD-VIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTA 450 (511)
Q Consensus 385 ----~n~p----~qL~~g~~-----~d~p~~pdV~~i~L~~gD-~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA 450 (511)
.+.. +.+|.... .....+|++..+++.++| |||||||||||+|+++|+++++.+....+..|+.+|
T Consensus 159 ~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a 238 (254)
T PF00481_consen 159 ENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAA 238 (254)
T ss_dssp ETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred cchhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHH
Confidence 0111 11221110 123356899999999886 999999999999999999999999876666799999
Q ss_pred HHHHHHHHh
Q 010417 451 QKIAALARQ 459 (511)
Q Consensus 451 ~~Lv~~A~~ 459 (511)
+.|++.|+.
T Consensus 239 ~~L~~~A~~ 247 (254)
T PF00481_consen 239 EKLVDEAIA 247 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999999
No 11
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.88 E-value=5.1e-22 Score=202.00 Aligned_cols=141 Identities=19% Similarity=0.290 Sum_probs=110.3
Q ss_pred CCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccc--------------------ccCCccceec-------C
Q 010417 342 GSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQH--------------------DFNFTYQLEY-------G 394 (511)
Q Consensus 342 GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~--------------------~~n~p~qL~~-------g 394 (511)
+||||||+++.+++|+|||.|||||+|+|+|+.+.++.+|.. +.|....|+. .
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaYK 409 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAYK 409 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhhh
Confidence 479999999999999999999999999999999999887732 1111111211 0
Q ss_pred CCCCCC-------CcceEEEEecCCC-CEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCC
Q 010417 395 SNSDLP-------SSGQVFTIPVAPG-DVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDR 466 (511)
Q Consensus 395 ~~~d~p-------~~pdV~~i~L~~g-D~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~ 466 (511)
.....| ..|+|....|++. +|+||+|||||++|+.+|+++||+..+..+..+.++|+.|.+.++.-.-+
T Consensus 410 ~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~T~--- 486 (542)
T KOG0699|consen 410 KNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPSTD--- 486 (542)
T ss_pred cccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCCCC---
Confidence 111222 3479999999865 49999999999999999999999999988888999999999999871111
Q ss_pred CCcchhhhhhcccccCCCCcCCeEEEEEEEecC
Q 010417 467 QTPFSTAAQDAGFRYYGGKLDDITVVVSYITNC 499 (511)
Q Consensus 467 ~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~ 499 (511)
-.+-..|||||||+.|.+.
T Consensus 487 --------------GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 487 --------------GDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred --------------CCCcCCCcceEEEEEeccc
Confidence 1144679999999999854
No 12
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.85 E-value=1.4e-20 Score=195.04 Aligned_cols=183 Identities=24% Similarity=0.267 Sum_probs=124.4
Q ss_pred CCceEEe-----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHH-HHHHHHc-----------CCC--------------
Q 010417 274 GEDAHFI-----SDKQAIGVADGVGGWANHGVNAGLYSRELMSN-SVAAIQE-----------EPD-------------- 322 (511)
Q Consensus 274 NEDa~~V-----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~-~l~~l~~-----------~~~-------------- 322 (511)
.||.+-+ .++.|+||||||||.+ +++|.+..+-. +..++.. +..
T Consensus 85 ~edrv~~~~s~~~~~~fvGIyDGhgGp~-----as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~ 159 (390)
T KOG0700|consen 85 EEDRVSVAVSEENGWLFVGIYDGHGGPD-----ASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQL 159 (390)
T ss_pred ccCcceeeeeccCCeEEEEEecCCCCcc-----HHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcc
Confidence 4776654 4678999999999999 77776544333 2222211 100
Q ss_pred ----C-CCCHHHHHHHHHHccC-----------------cCCCceEEEEEEeCCeEEEEEEcCCcEEEEe---CC---eE
Q 010417 323 ----G-SIDPARVLEKAHSSTR-----------------AKGSSTACIIALTDQGLRAINLGDSGFVVVR---DG---CT 374 (511)
Q Consensus 323 ----~-~~~~~e~L~~A~~~~~-----------------~~GGSTavvalI~~~~L~VANVGDSRayLiR---dG---~l 374 (511)
. .....++|.+||.+++ ...|||++++++.+..|||||+|||||+|.+ ++ ..
T Consensus 160 ~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A 239 (390)
T KOG0700|consen 160 SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVA 239 (390)
T ss_pred cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEE
Confidence 0 1234567777776541 3356999999999999999999999999965 33 24
Q ss_pred EEcCcccc-------------cc------cCCccc-ee-------------------------------cCCCCCCCCcc
Q 010417 375 VFRSPVQQ-------------HD------FNFTYQ-LE-------------------------------YGSNSDLPSSG 403 (511)
Q Consensus 375 i~lS~~q~-------------~~------~n~p~q-L~-------------------------------~g~~~d~p~~p 403 (511)
+++|.+|. |. .+...+ +| .+..+....+|
T Consensus 240 ~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP 319 (390)
T KOG0700|consen 240 VQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEP 319 (390)
T ss_pred EecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccc
Confidence 67887772 10 000000 00 01112223478
Q ss_pred eEEEEecCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhc
Q 010417 404 QVFTIPVAPGD-VIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRA 461 (511)
Q Consensus 404 dV~~i~L~~gD-~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a 461 (511)
.++..+|.|.| ||||+||||||.|+|+|++++|.+++.....-+.+|+.|+++|+.++
T Consensus 320 ~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 320 SITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGRA 378 (390)
T ss_pred eEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhhh
Confidence 99999999777 99999999999999999999999876532233679999999999844
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.80 E-value=9.1e-19 Score=176.94 Aligned_cols=202 Identities=27% Similarity=0.308 Sum_probs=134.5
Q ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHH-HH---cC---------------CCC--------------CCCH-
Q 010417 282 DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAA-IQ---EE---------------PDG--------------SIDP- 327 (511)
Q Consensus 282 d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~-l~---~~---------------~~~--------------~~~~- 327 (511)
++.+|.+||||.|.+ ++..|++++...+.. +. +. +.. .+..
T Consensus 143 ~~~~~slfdghags~-----~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E 217 (493)
T KOG1323|consen 143 DGALFSLFDGHAGSA-----VAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHE 217 (493)
T ss_pred cceeeeeecCCCcch-----HHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchH
Confidence 688999999999999 888888877654431 11 00 000 0001
Q ss_pred ---HHHHHHHHHcc-----------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccc----------cc
Q 010417 328 ---ARVLEKAHSST-----------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQ----------QH 383 (511)
Q Consensus 328 ---~e~L~~A~~~~-----------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q----------~~ 383 (511)
.-+|+.||... ...||||+++++.--+++|++|.|||||+++|+|+++.++.+- ..
T Consensus 218 ~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPetERqRlQ~L 297 (493)
T KOG1323|consen 218 HLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPETERQRLQEL 297 (493)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHHHHHHHHHH
Confidence 12456666543 4679999999999999999999999999999999988766421 00
Q ss_pred cc-------------CCccce-----------------------------------------------ec-CCCCC----
Q 010417 384 DF-------------NFTYQL-----------------------------------------------EY-GSNSD---- 398 (511)
Q Consensus 384 ~~-------------n~p~qL-----------------------------------------------~~-g~~~d---- 398 (511)
.| .+|.++ +. ...+|
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 00 001000 00 00011
Q ss_pred -----------CCCcceEEEEecC-----CCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCC--CH---HHHHHHHHHHH
Q 010417 399 -----------LPSSGQVFTIPVA-----PGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGL--GP---QVTAQKIAALA 457 (511)
Q Consensus 399 -----------~p~~pdV~~i~L~-----~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~--~~---q~aA~~Lv~~A 457 (511)
....|++...++. ++|++||+||||||+++|+|+..+|+..+.... +| ..+|+.|+..|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~a 457 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAA 457 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHh
Confidence 1124677666554 789999999999999999999999998775432 33 35889999988
Q ss_pred HhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEec
Q 010417 458 RQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITN 498 (511)
Q Consensus 458 ~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~ 498 (511)
.....|..|..+ +-.-|+-|||||.||-+..
T Consensus 458 rg~~k~rgWr~~----------n~~lgSgDDIsVfVIPL~~ 488 (493)
T KOG1323|consen 458 RGQQKDRGWRMN----------NGGLGSGDDISVFVIPLKY 488 (493)
T ss_pred cCccCCCceecc----------CCCcCCCCceEEEEEeccC
Confidence 875555544332 1224677999999997754
No 14
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.74 E-value=1.7e-17 Score=159.15 Aligned_cols=168 Identities=24% Similarity=0.285 Sum_probs=96.8
Q ss_pred cCCCCCCCCCCCceEEe---cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHH-HHHcCCCCCC-C-HHHH---HH-H
Q 010417 264 LPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVA-AIQEEPDGSI-D-PARV---LE-K 333 (511)
Q Consensus 264 ~s~~Gk~R~~NEDa~~V---~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~-~l~~~~~~~~-~-~~e~---L~-~ 333 (511)
.+|.+ ++..|||++.+ ++..+++||||+||.. .++.+++++...+. .+........ . ..++ +. +
T Consensus 3 ~sh~~-~~~~nqD~~~~~~~~~~~~~aVaDG~g~~~-----~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T PF13672_consen 3 RSHRG-RGAPNQDAFGIRTDDDGNLAAVADGVGGSP-----YGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKE 76 (212)
T ss_dssp ----T-TSSS--EEEEEE-TCCTCEEEEEEEESTTT-----HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred ccccC-CCCCCCCCEEeeeCCCCEEEEEEECCCCCc-----hhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 46676 57999999987 5677889999999998 77787777666554 3443332111 1 1112 22 2
Q ss_pred HHH-----------c-cCcCCCceEEEEEEeCCeEEEEEEcCCcEEE-EeCCeEEEcCccccccc-CCccceecCCCCCC
Q 010417 334 AHS-----------S-TRAKGSSTACIIALTDQGLRAINLGDSGFVV-VRDGCTVFRSPVQQHDF-NFTYQLEYGSNSDL 399 (511)
Q Consensus 334 A~~-----------~-~~~~GGSTavvalI~~~~L~VANVGDSRayL-iRdG~li~lS~~q~~~~-n~p~qL~~g~~~d~ 399 (511)
.+. . .....+||++++++.++.++++|+||||+|+ .++|++..++.++...+ +....+.. .+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~~~~~~~~~~~---~~~ 153 (212)
T PF13672_consen 77 ILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGEYPNQTRSLTG---DDP 153 (212)
T ss_dssp HHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHHHHHCTTSCCH---HCC
T ss_pred HHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccchhhhhhhccCc---ccc
Confidence 221 1 1233459999999999999999999999965 57999988887765332 11111211 122
Q ss_pred CCcceEEEEecCCCCEEEEEccCCCCCCCHHH-HHHHHHHHH
Q 010417 400 PSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNE-ITAVVVHAM 440 (511)
Q Consensus 400 p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eE-I~~iV~~~l 440 (511)
....++..++++++|.|+|||||||+.+.+++ +..++.+.+
T Consensus 154 ~~~~~~~~~~~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~~ 195 (212)
T PF13672_consen 154 EPDVQYGSIPLEEGDVILLCSDGVWDNLRSYEDLEQFLKDLW 195 (212)
T ss_dssp CTETEEEEEE--TT-EEEEE-HHHHTTS-HHHHHHHH-----
T ss_pred ccCCeEEEEEcCCCCEEEEECcCccccCCCHHHHHHHhhhcc
Confidence 33457888899999999999999999998755 667776553
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.74 E-value=2.7e-16 Score=148.72 Aligned_cols=168 Identities=21% Similarity=0.232 Sum_probs=117.9
Q ss_pred CCCCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcc----CcCC
Q 010417 271 ETGGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSST----RAKG 342 (511)
Q Consensus 271 R~~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A~~~~----~~~G 342 (511)
+..+.|.+.+ + +..+++|+||||+.. ++.+++..+...+..+.... ..+.++++...... ....
T Consensus 14 ~~~~GD~~~~~~~~~~~~~~~v~Dg~G~G~-----~aa~~s~~~~~~~~~~~~~~---~~~~~~l~~~n~~l~~~~~~~~ 85 (193)
T smart00331 14 TQVGGDFYDVVKLPEGRLLIAIADVMGKGL-----AAALAMSMARSALRTLLSEG---ISLSQILERLNRAIYENGEDGM 85 (193)
T ss_pred HhcCccEEEEEEeCCCeEEEEEEecCCCCh-----HHHHHHHHHHHHHHHHhhcC---CCHHHHHHHHHHHHHhcCCCCc
Confidence 5788999876 3 468999999999655 45555555454444443321 34666655544332 2334
Q ss_pred CceEEEEEEe--CCeEEEEEEcCCcEEEEe-CCeEEEcCcccccccCCccceecCCCCCCCCcceEEEEecCCCCEEEEE
Q 010417 343 SSTACIIALT--DQGLRAINLGDSGFVVVR-DGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVFTIPVAPGDVIIAG 419 (511)
Q Consensus 343 GSTavvalI~--~~~L~VANVGDSRayLiR-dG~li~lS~~q~~~~n~p~qL~~g~~~d~p~~pdV~~i~L~~gD~LVL~ 419 (511)
++|+++++++ .++++++|+||+|+++++ ++..+..+... ...++. ..+. +++...+++++||+|+|+
T Consensus 86 ~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------~~~lG~--~~~~--~~~~~~~~l~~gd~l~l~ 155 (193)
T smart00331 86 FATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------GAPLGL--EPDV--EVDVRELTLEPGDLLLLY 155 (193)
T ss_pred EEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------Cceeee--CCCC--cceeEEEeeCCCCEEEEE
Confidence 6999888884 668999999999999999 66555544321 112332 1222 257788999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 010417 420 TDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALAR 458 (511)
Q Consensus 420 SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~ 458 (511)
||||||.++++++.+++.+.. ..++++++++|.+++.
T Consensus 156 TDGl~e~~~~~~l~~~l~~~~--~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 156 TDGLTEARNPERLEELLEELL--GSPPAEIAQRILEELL 192 (193)
T ss_pred CCCccccCChHHHHHHHHHhc--CCCHHHHHHHHHHHHh
Confidence 999999999999999998763 3578999999988764
No 16
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.65 E-value=6.1e-15 Score=167.83 Aligned_cols=204 Identities=16% Similarity=0.205 Sum_probs=139.5
Q ss_pred CCCcceEEEEEEEecCCCCCCCCCCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCC
Q 010417 250 SAGKTLKLLSGACCLPHPDKEETGGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSI 325 (511)
Q Consensus 250 ~~~~~lrl~~gs~~~s~~Gk~R~~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~ 325 (511)
....++++.+|.+..+.+| +..++|.+.+ + +..+++|+||+|.-. .+..++..+...++.+... ..
T Consensus 545 ~e~~~~~~~~g~a~~~k~g--~~vsGD~y~~~~l~~g~~~~~laDGmGhG~-----~Aa~~S~~~~~ll~~~~~~---g~ 614 (764)
T TIGR02865 545 EETPKYHVSTGVARAAKDG--ELVSGDSYSFGKLSAGKYAVAISDGMGSGP-----EAAQESSACVRLLEKFLES---GF 614 (764)
T ss_pred ecCCceeehhhHHHhcCCC--CcccCceEEEEEECCCEEEEEEEcccCCCH-----HHHHHHHHHHHHHHHHHHc---CC
Confidence 3445678888887777666 8899999876 3 446789999999544 3444444545455544432 23
Q ss_pred CHHHHHHHHHHc----cCcCCCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccccCCccceecCCCCCC
Q 010417 326 DPARVLEKAHSS----TRAKGSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDL 399 (511)
Q Consensus 326 ~~~e~L~~A~~~----~~~~GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~ 399 (511)
++.++++..... ......+|+.+++++ .+++.++|+||++.|+.|++++...+.. +.| + |...+
T Consensus 615 ~~~~ai~~lN~~L~~~~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~-----~lP--l--Gil~~- 684 (764)
T TIGR02865 615 DREVAIKTVNSILSLRSTDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSS-----NLP--I--GILDE- 684 (764)
T ss_pred CHHHHHHHHHHHHHhCCCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCC-----Cce--e--EeccC-
Confidence 466665554322 112224898888887 4689999999999999999887665321 222 2 22222
Q ss_pred CCcceEEEEecCCCCEEEEEccCCCCCCCHHH-----HHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhh
Q 010417 400 PSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNE-----ITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAA 474 (511)
Q Consensus 400 p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eE-----I~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a 474 (511)
.+++..+.++++||+|||+||||+|..++++ +.+++.+. ...+|+++++.|++.+.+..
T Consensus 685 -~~~~~~~~~L~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~--~~~~p~ela~~Il~~a~~~~------------- 748 (764)
T TIGR02865 685 -VDVELVRKKLKNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKET--NTNDPEEIAEYLLEKAKELR------------- 748 (764)
T ss_pred -CccceEEEEeCCCCEEEEECCCCCcCCcccccHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHHhc-------------
Confidence 2357788899999999999999999876533 45555432 24689999999999998721
Q ss_pred hhcccccCCCCcCCeEEEEEEE
Q 010417 475 QDAGFRYYGGKLDDITVVVSYI 496 (511)
Q Consensus 475 ~~~g~~~~~Gs~DNITVIVV~i 496 (511)
.+...||+|++++++
T Consensus 749 -------~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 749 -------SGKIKDDMTVIVAKV 763 (764)
T ss_pred -------CCCCCCCeEEEEEEe
Confidence 023479999999986
No 17
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.55 E-value=4.6e-13 Score=126.13 Aligned_cols=174 Identities=29% Similarity=0.355 Sum_probs=112.5
Q ss_pred CeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcc----CcC-CCceEEEEEEeC--Ce
Q 010417 283 KQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSST----RAK-GSSTACIIALTD--QG 355 (511)
Q Consensus 283 ~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A~~~~----~~~-GGSTavvalI~~--~~ 355 (511)
..++.|+|++| +|+.|+.++..+.. .++.+.... .++.++++...+.. ... ..+|++++.++. +.
T Consensus 4 ~~~~~v~D~~G----hG~~aa~~~~~~~~-~~~~~~~~~---~~p~~~l~~ln~~l~~~~~~~~~~~t~~~~~~d~~~~~ 75 (193)
T PF07228_consen 4 RYFIIVGDVSG----HGVSAALLSAALAS-AIRELLDEG---LDPEELLEALNRRLYRDLKGDNRYATACYAIIDPETGT 75 (193)
T ss_dssp EEEEEEEEESS----SSHHHHHHHHHHHH-HHHHHHHTT---TSHHHHHHHHHHHHHHHTTTTSTTEEEEEEEEETTTTE
T ss_pred EEEEEEEEecC----CCHHHHHHHHHHHH-HHHHHHHcC---CCHHHHHHHHHHHHHHHhhhccccceEEEEEecccceE
Confidence 34679999999 34446655555544 444333322 34777777665443 333 458888888874 37
Q ss_pred EEEEEEcCCcEEEEeCCe--EEEcCcccccccCCccceecCCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHH---
Q 010417 356 LRAINLGDSGFVVVRDGC--TVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNN--- 430 (511)
Q Consensus 356 L~VANVGDSRayLiRdG~--li~lS~~q~~~~n~p~qL~~g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~e--- 430 (511)
++++|+|+++++++++++ ..... ..+.| | |...+ ......++++++||.|+|+||||+|....+
T Consensus 76 l~~~~aG~~~~l~~~~~~~~~~~~~-----~~~~~--l--G~~~~--~~~~~~~~~l~~gd~l~l~TDGl~e~~~~~~~~ 144 (193)
T PF07228_consen 76 LTYANAGHPPPLLLRPGGREIEQLE-----SEGPP--L--GIFED--IDYQEQEIQLEPGDRLLLYTDGLFEALNEDGEF 144 (193)
T ss_dssp EEEEEESSSEEEEEETTCTEEEEET-----CSSBB--C--SSSCT--TCEEEEEEE--TTEEEEEECHHHCTTTCHHCHH
T ss_pred EEEeCCCCCCEEEEeccccceeecc-----cCccc--e--eeecc--ccccceEEEeccccEEEEeCCChhhccCCccch
Confidence 999999999999999843 22211 11222 2 22222 336778899999999999999999999543
Q ss_pred ----HHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEe
Q 010417 431 ----EITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYIT 497 (511)
Q Consensus 431 ----EI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~ 497 (511)
++.+++.+. ...+++++++.|++.+... ..+...||+||++++++
T Consensus 145 ~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~~~--------------------~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 145 FGEERLLELLDEN--RGLSPQEIIDALLEAIDRF--------------------GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp CCCHHHHHHHHCH--TTS-HHHHHHHHHHHHHHH--------------------TTSSTSS-EEEEEEEE-
T ss_pred hHHHHHHHHHhhc--cCCCHHHHHHHHHHHHHHh--------------------cCCCCCCceEEEEEEEC
Confidence 334454433 3467999999999988761 11457799999999874
No 18
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.78 E-value=4.7e-07 Score=95.18 Aligned_cols=186 Identities=21% Similarity=0.216 Sum_probs=120.7
Q ss_pred CCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHH---HHccCc-CCCc
Q 010417 273 GGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKA---HSSTRA-KGSS 344 (511)
Q Consensus 273 ~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A---~~~~~~-~GGS 344 (511)
.+.|.|-+ . +...++|.|.+| +|+.|+.. ........+.+... ...+|.++|+.. +..... .--+
T Consensus 161 vGGD~yd~~~~~~~~~~i~I~DvsG----~Gv~aal~-m~~~~~~~~~~~~~--~~~~p~~~l~~~n~~~~~~~~~~~f~ 233 (367)
T COG2208 161 VGGDYYDFIQLGEKRLRIGIGDVSG----KGVPAALL-MLMPKLALRLLLES--GPLDPADVLETLNRVLKQNLEEDMFV 233 (367)
T ss_pred cCCceEEEEEECCcEEEEEEEeccC----CCHHHHHH-HHHHHHHHHHhhhc--ccCCHHHHHHHHHHHHHhcccCCcEE
Confidence 66887755 3 577899999888 33334444 22222233333332 135677666654 333222 1338
Q ss_pred eEEEEEEe--CCeEEEEEEcCCcEEEEeCCeE---EEcCcccccccCCccceecCCCCCCCCcceEEEEecCCCCEEEEE
Q 010417 345 TACIIALT--DQGLRAINLGDSGFVVVRDGCT---VFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVFTIPVAPGDVIIAG 419 (511)
Q Consensus 345 TavvalI~--~~~L~VANVGDSRayLiRdG~l---i~lS~~q~~~~n~p~qL~~g~~~d~p~~pdV~~i~L~~gD~LVL~ 419 (511)
|.+..+++ .+.+.++|+|.-.+++.+.++. ..+.. .. +..|...+.. ..+...++++||.++|.
T Consensus 234 T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~-----~g----~piG~~~~~~--~~~~~~~l~~gd~lvl~ 302 (367)
T COG2208 234 TLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTA-----LG----LPIGLLPDYQ--YEVASLQLEPGDLLVLY 302 (367)
T ss_pred EEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccC-----CC----ceeeecCCcc--chheeEEecCCCEEEEE
Confidence 88888887 4589999999999999997653 22111 01 1122222332 57788899999999999
Q ss_pred ccCCCC-------CCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEE
Q 010417 420 TDGLFD-------NLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVV 492 (511)
Q Consensus 420 SDGLwD-------~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVI 492 (511)
||||.| .+..+...+.+... .+.+++++++.+.+...+.. ......||||++
T Consensus 303 tDGv~Ea~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~i~~~l~~~~-------------------~~~~~~DDiTll 361 (367)
T COG2208 303 TDGVTEARNSDGEFFGLERLLKILGRL--LGQPAEEILEAILESLEELQ-------------------GDQIQDDDITLL 361 (367)
T ss_pred cCCeeeeecCCccEecHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHhh-------------------CCccccCceEEE
Confidence 999998 45556667776652 35689999999999888721 123456889999
Q ss_pred EEEEe
Q 010417 493 VSYIT 497 (511)
Q Consensus 493 VV~i~ 497 (511)
++++.
T Consensus 362 ~lk~~ 366 (367)
T COG2208 362 VLKVK 366 (367)
T ss_pred EEEec
Confidence 99975
No 19
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.77 E-value=3.1e-08 Score=112.31 Aligned_cols=187 Identities=16% Similarity=0.198 Sum_probs=119.8
Q ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHH-HHHHcCCCCCCCHHHHHHHHHHcc-------CcCCCceEEEEEEeC
Q 010417 282 DKQAIGVADGVGGWANHGVNAGLYSRELMSNSV-AAIQEEPDGSIDPARVLEKAHSST-------RAKGSSTACIIALTD 353 (511)
Q Consensus 282 d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l-~~l~~~~~~~~~~~e~L~~A~~~~-------~~~GGSTavvalI~~ 353 (511)
....|+.+||-+-.. -..+....|...+ +++.... +..+.|..+|... ...-|..++.+.|..
T Consensus 550 ~~a~~g~~dgs~n~~-----v~~~vq~~ma~~L~eev~~~~----~et~~mr~~fl~~~rklg~~g~~lg~~~~~~~i~~ 620 (1081)
T KOG0618|consen 550 PQATFGCFDGSRNSR-----VLSLVQDTMASYLAEEVQLYG----NETEQMRNTFLRLNRKLGEEGQVLGGSVVLCQIVE 620 (1081)
T ss_pred CcceEEEEcCCCchh-----HHHHHHHHHHHHHHHHHHhcc----ChHHHHHHHHHHHhhhhhhhhccccchhhheeecc
Confidence 567899999988544 2333333333322 2222211 2222344444322 222233444444443
Q ss_pred C--------eEEEEEEcCCcEEEEeCCeEEEcCccccc--------------cc-C----------Cccceec-CCCCCC
Q 010417 354 Q--------GLRAINLGDSGFVVVRDGCTVFRSPVQQH--------------DF-N----------FTYQLEY-GSNSDL 399 (511)
Q Consensus 354 ~--------~L~VANVGDSRayLiRdG~li~lS~~q~~--------------~~-n----------~p~qL~~-g~~~d~ 399 (511)
+ .+.+||+|+|.++++++|+-...|..+.+ ++ + ..+++|. ......
T Consensus 621 d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P~v 700 (1081)
T KOG0618|consen 621 DSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFPHV 700 (1081)
T ss_pred cccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccccc
Confidence 2 58999999999999999986555443311 11 0 0111111 011222
Q ss_pred CCcceEEEEecCCC-CEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcc
Q 010417 400 PSSGQVFTIPVAPG-DVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAG 478 (511)
Q Consensus 400 p~~pdV~~i~L~~g-D~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g 478 (511)
-..|++..+.+.+. ++||+++-+||++|+-+++++.+++. .+|-.+|++|.+.|..
T Consensus 701 ~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~----~dpL~AAkKL~d~AqS------------------- 757 (1081)
T KOG0618|consen 701 LPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNV----EDPLLAAKKLCDLAQS------------------- 757 (1081)
T ss_pred cCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcC----CchHHHHHHHHHHHHh-------------------
Confidence 23689999999854 59999999999999999999999854 7899999999999988
Q ss_pred cccCCCCcCCeEEEEEEEecCCCccc
Q 010417 479 FRYYGGKLDDITVVVSYITNCEDVCS 504 (511)
Q Consensus 479 ~~~~~Gs~DNITVIVV~i~~~~~~~~ 504 (511)
=|..||++|+||++...++.+.
T Consensus 758 ----Ygc~~nv~vlVv~l~~~~~~~~ 779 (1081)
T KOG0618|consen 758 ----YGCAENVSVLVVRLNHLEECVD 779 (1081)
T ss_pred ----cccccCeeEEEEEeecchhhcc
Confidence 3788999999999988766443
No 20
>PRK10693 response regulator of RpoS; Provisional
Probab=77.28 E-value=28 Score=35.77 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=55.6
Q ss_pred CCCceEEe----cCCeEEEEEc--CCCCCCCCCCCHHHHHHHHHHHHHHHHHc-CCCCCCCHHHHHHHHHH---ccCcCC
Q 010417 273 GGEDAHFI----SDKQAIGVAD--GVGGWANHGVNAGLYSRELMSNSVAAIQE-EPDGSIDPARVLEKAHS---STRAKG 342 (511)
Q Consensus 273 ~NEDa~~V----~d~~lfgVaD--GhGG~a~sg~~Ag~~As~l~~~~l~~l~~-~~~~~~~~~e~L~~A~~---~~~~~G 342 (511)
.+.|.+-+ ++...|-++| ||||+. ..++...+.++...+..... ......+|.++++.... +....+
T Consensus 149 ~~GD~~d~~~l~~~~~~~~~~DvsGhg~hg---~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~ 225 (303)
T PRK10693 149 KPGLVLDIAALSDNDLAFYCLDVTRAGDNG---VLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG 225 (303)
T ss_pred CCccEEeeeecCCCcEEEEEEecCCCCccc---HHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc
Confidence 45777755 3455666777 666654 22444444433333333211 11112357777665433 333223
Q ss_pred CceEEEEEEeCC--eEEEEEEcCCcEEEEeCCeE
Q 010417 343 SSTACIIALTDQ--GLRAINLGDSGFVVVRDGCT 374 (511)
Q Consensus 343 GSTavvalI~~~--~L~VANVGDSRayLiRdG~l 374 (511)
.-|++.++++.. .+.++|.|....++..+++.
T Consensus 226 ~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 226 QFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred eeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 368888888844 79999999999886444444
No 21
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=31.56 E-value=25 Score=29.18 Aligned_cols=16 Identities=25% Similarity=0.713 Sum_probs=13.8
Q ss_pred CCCCEEEEEccCCCCC
Q 010417 411 APGDVIIAGTDGLFDN 426 (511)
Q Consensus 411 ~~gD~LVL~SDGLwD~ 426 (511)
++|..+|+++||+|=.
T Consensus 25 ~~G~Rllva~nGv~lE 40 (72)
T PF09436_consen 25 RPGHRLLVASNGVFLE 40 (72)
T ss_pred cCCcEEEEecCcEEEE
Confidence 3899999999999943
No 22
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=28.68 E-value=1.1e+02 Score=30.17 Aligned_cols=50 Identities=18% Similarity=0.244 Sum_probs=35.6
Q ss_pred CCCCEEEEEccCCC-----------CCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh
Q 010417 411 APGDVIIAGTDGLF-----------DNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQR 460 (511)
Q Consensus 411 ~~gD~LVL~SDGLw-----------D~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~ 460 (511)
.-+|.++..|.|+| |+|.++..-+.+..--.+-.=|+++|+.|++...+|
T Consensus 69 DIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~R 129 (237)
T COG3700 69 DIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred ccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhc
Confidence 44788999999998 667777666665532122234789999999988774
No 23
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=25.99 E-value=1e+02 Score=24.69 Aligned_cols=26 Identities=19% Similarity=0.350 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 010417 427 LYNNEITAVVVHAMRAGLGPQVTAQKIAA 455 (511)
Q Consensus 427 Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~ 455 (511)
-+++||..++.++ +.+|.+++++|+.
T Consensus 19 hse~eIya~L~ec---nMDpnea~qrLL~ 44 (60)
T PF06972_consen 19 HSEEEIYAMLKEC---NMDPNEAVQRLLS 44 (60)
T ss_pred CCHHHHHHHHHHh---CCCHHHHHHHHHh
Confidence 5789999999887 6899999999986
Done!