Query 010417
Match_columns 511
No_of_seqs 289 out of 1433
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 06:21:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1txo_A Putative bacterial enzy 100.0 2.6E-34 8.9E-39 278.0 22.5 207 254-498 2-237 (237)
2 2pk0_A Serine/threonine protei 100.0 2.1E-33 7.1E-38 273.8 21.5 208 257-498 6-247 (250)
3 2p8e_A PPM1B beta isoform vari 100.0 6E-34 2.1E-38 288.3 17.5 216 255-501 22-302 (307)
4 2i0o_A Ser/Thr phosphatase; be 100.0 3.6E-33 1.2E-37 282.0 18.8 215 256-497 22-304 (304)
5 3qn1_B Protein phosphatase 2C 100.0 2.4E-33 8.4E-38 287.9 17.7 212 259-501 16-332 (337)
6 3kdj_B Protein phosphatase 2C 100.0 4.2E-33 1.4E-37 283.1 18.9 213 258-501 10-309 (316)
7 2iq1_A Protein phosphatase 2C 100.0 7.4E-33 2.5E-37 275.5 19.1 201 264-500 13-265 (274)
8 2j82_A TPPHA, protein serine-t 100.0 2.5E-32 8.4E-37 264.3 20.1 200 263-496 5-240 (240)
9 2i44_A Serine-threonine phosph 100.0 2.4E-32 8.1E-37 277.5 20.7 211 257-498 22-322 (324)
10 4da1_A Protein phosphatase 1K, 100.0 3.2E-32 1.1E-36 285.0 20.8 204 263-502 126-381 (389)
11 2jfr_A Ser-Thr phosphatase MSP 100.0 9.3E-32 3.2E-36 259.6 20.3 201 254-496 3-233 (234)
12 1a6q_A Phosphatase 2C; catalyt 100.0 7.8E-32 2.7E-36 281.9 18.1 214 255-499 20-294 (382)
13 2j4o_A Mitogen-activated prote 100.0 6.6E-32 2.2E-36 283.9 14.8 217 267-500 42-369 (401)
14 2irm_A Mitogen-activated prote 100.0 4.6E-32 1.6E-36 280.6 11.8 223 263-498 24-357 (358)
15 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.1E-30 3.7E-35 271.6 19.8 217 247-500 3-336 (364)
16 2pnq_A [pyruvate dehydrogenase 100.0 8.9E-30 3.1E-34 272.8 19.1 225 265-498 43-456 (467)
17 3d8k_A PP2C, protein phosphata 100.0 4.4E-30 1.5E-34 268.3 15.0 203 264-501 18-328 (377)
18 3rnr_A Stage II sporulation E 100.0 2.8E-29 9.5E-34 240.9 13.2 177 281-496 8-211 (211)
19 3t91_A Stage II sporulation pr 99.9 1.4E-21 4.7E-26 189.8 17.3 210 252-504 3-227 (242)
20 3pu9_A Protein serine/threonin 99.8 3.6E-19 1.2E-23 174.1 23.4 206 252-501 6-228 (242)
21 3zt9_A Serine phosphatase; hyd 99.8 5.5E-18 1.9E-22 160.4 18.5 185 257-495 4-193 (193)
22 3f79_A Probable two-component 99.7 2.8E-16 9.6E-21 153.7 19.4 194 257-497 38-253 (255)
23 3ke6_A Protein RV1364C/MT1410; 99.3 6.4E-11 2.2E-15 123.9 22.2 206 257-501 36-261 (399)
24 3eq2_A Probable two-component 98.9 3.9E-08 1.3E-12 101.4 16.3 152 258-429 178-344 (394)
25 1rpb_A Tricyclic peptide RP 71 20.4 21 0.00073 22.4 -0.0 11 98-108 8-18 (26)
No 1
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00 E-value=2.6e-34 Score=278.05 Aligned_cols=207 Identities=22% Similarity=0.262 Sum_probs=162.9
Q ss_pred ceEEEEEEEecCCCCCCCCCCCceEEecCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 010417 254 TLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEK 333 (511)
Q Consensus 254 ~lrl~~gs~~~s~~Gk~R~~NEDa~~V~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~ 333 (511)
++++.++. .+++|+.|+.|||++++ +..+|+|||||||+. ++++|++++...+..+.... ...++.+.|++
T Consensus 2 ~~~~~~~~--~s~~G~~r~~nED~~~~-~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~-~~~~~~~~l~~ 72 (237)
T 1txo_A 2 TLVLRYAA--RSDRGLVRANNEDSVYA-GARLLALADGMGGHA-----AGEVASQLVIAALAHLDDDE-PGGDLLAKLDA 72 (237)
T ss_dssp -CEEEEEE--EEECCSSCSSCCEEEEE-CSSEEEEEEEECTTT-----HHHHHHHHHHHHHGGGGSSC-CCSCHHHHHHH
T ss_pred ceEEEEEE--ecCCCCCCCcCCCcccc-CCCEEEEEeCCCCcH-----HHHHHHHHHHHHHHHHhhhC-CchhHHHHHHH
Confidence 45666665 68889889999999987 678999999999999 89999998887665443311 12356666666
Q ss_pred HHHcc------------C-cCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCcccccc--------------cC
Q 010417 334 AHSST------------R-AKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD--------------FN 386 (511)
Q Consensus 334 A~~~~------------~-~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~--------------~n 386 (511)
++.+. . ...|||++++++.+++++++|+||||+|++|+|++.++|.+|... .+
T Consensus 73 a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~~~~G~i~~~~~~~ 152 (237)
T 1txo_A 73 AVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAHS 152 (237)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTSSCTTGGGG
T ss_pred HHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHHHHHcCCCCHHHHhh
Confidence 55432 1 224699999999999999999999999999999999999988531 11
Q ss_pred Cccc--eecCCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccc
Q 010417 387 FTYQ--LEYGSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDK 464 (511)
Q Consensus 387 ~p~q--L~~g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~ 464 (511)
.|.+ +. ...++.+.+|++..++++++|+||||||||||+++++|+.+++.+ .+|+++|+.|++.|++
T Consensus 153 ~~~~~~~t-r~lg~~~~~p~~~~~~l~~~d~lvl~SDGl~d~l~~~~i~~~~~~-----~~~~~~a~~L~~~a~~----- 221 (237)
T 1txo_A 153 HPQRSLIM-RALTGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEALQI-----PEVAESAHRLIELALR----- 221 (237)
T ss_dssp CTTTTCBC-CCBSSSCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTS-----SSHHHHHHHHHHHHHH-----
T ss_pred Ccccccee-eccCCCCccceEEEEecCCCCEEEEECCCCCCCCCHHHHHHHHhc-----CCHHHHHHHHHHHHHH-----
Confidence 1211 11 112344567899999999999999999999999999999999853 4899999999999998
Q ss_pred CCCCcchhhhhhcccccCCCCcCCeEEEEEEEec
Q 010417 465 DRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITN 498 (511)
Q Consensus 465 ~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~ 498 (511)
+|+.|||||||+++..
T Consensus 222 ------------------~g~~DniTvivv~~~~ 237 (237)
T 1txo_A 222 ------------------GGGPDNVTVVVADLEH 237 (237)
T ss_dssp ------------------TTCCSCEEEEEEEEEC
T ss_pred ------------------cCCCCCeEEEEEEeeC
Confidence 6889999999999863
No 2
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00 E-value=2.1e-33 Score=273.80 Aligned_cols=208 Identities=19% Similarity=0.212 Sum_probs=159.8
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe-c---CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHH-HHHcCCC-CCCCHHHH
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI-S---DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVA-AIQEEPD-GSIDPARV 330 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V-~---d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~-~l~~~~~-~~~~~~e~ 330 (511)
+.++. .+++|+.|+.|||++++ . +..+|+|||||||+. +++++++++...+. .+..... ...++.+.
T Consensus 6 ~~~~~--~s~~G~~r~~neD~~~~~~~~~~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 78 (250)
T 2pk0_A 6 MEISL--LTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHR-----AGNIASEMTVTDLGSDWAETDFSELSEIRDW 78 (250)
T ss_dssp EEEEE--EEECCTTCSCCCEEEEEEECTTCCEEEEEEEEECTTT-----HHHHHHHHHHHHHHHHHTTCCCCSHHHHHHH
T ss_pred EEEEE--ecCCCCCCCcCCCceEeccCCCCcEEEEEEeCCCCcH-----HHHHHHHHHHHHHHHHHhhcccCChhhHHHH
Confidence 44554 68899889999999988 2 578999999999999 89999988877765 5543221 01123344
Q ss_pred HHHHHHcc------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCcccccc--------------
Q 010417 331 LEKAHSST------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD-------------- 384 (511)
Q Consensus 331 L~~A~~~~------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~-------------- 384 (511)
|++++.+. ....|||++++++.+++++++|+||||+|++|+|++.++|.+|...
T Consensus 79 l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g~i~~~~~ 158 (250)
T 2pk0_A 79 MLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEA 158 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHHHHHcCCCCHHHH
Confidence 54444322 1235699999999999999999999999999999999999988541
Q ss_pred cCCccce--ecCCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcc
Q 010417 385 FNFTYQL--EYGSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQ 462 (511)
Q Consensus 385 ~n~p~qL--~~g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~ 462 (511)
...|.++ +...+.....+|++..+++++||+||||||||||+++++|+.+++.+ ..+++++|+.|++.|++
T Consensus 159 ~~~~~~~~ltralG~~~~~~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~~~~----~~~~~~~a~~L~~~a~~--- 231 (250)
T 2pk0_A 159 ASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQ----EKTLDDKNQDLITLANH--- 231 (250)
T ss_dssp HTCCSCCCBSCCBSCSSCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHTS----SSCHHHHHHHHHHHHHH---
T ss_pred HhCCCcceEEeecCCCCCccceEEEEEcCCCCEEEEECCCCCCCcCHHHHHHHHhc----CCCHHHHHHHHHHHHHH---
Confidence 1223332 11111122346899999999999999999999999999999998864 36899999999999998
Q ss_pred ccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEec
Q 010417 463 DKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITN 498 (511)
Q Consensus 463 d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~ 498 (511)
+++.|||||||+++..
T Consensus 232 --------------------~g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 232 --------------------RGGLDNITVALVYVES 247 (250)
T ss_dssp --------------------TTCCSCEEEEEEEECC
T ss_pred --------------------cCCCCCeEEEEEEeeC
Confidence 6788999999999974
No 3
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=288.27 Aligned_cols=216 Identities=19% Similarity=0.195 Sum_probs=158.2
Q ss_pred eEEEEEEEecCCCCCCCCCCCceEEe-c-------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCC---
Q 010417 255 LKLLSGACCLPHPDKEETGGEDAHFI-S-------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDG--- 323 (511)
Q Consensus 255 lrl~~gs~~~s~~Gk~R~~NEDa~~V-~-------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~--- 323 (511)
..+.+|. .++.|. |+.|||++++ . +..+|+|||||||+. ++++|++.+...+.........
T Consensus 22 ~~~~~~~--~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~-----~a~~as~~~~~~l~~~~~~~~~~~~ 93 (307)
T 2p8e_A 22 NGLRYGL--SSMQGW-RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSR-----VANYCSTHLLEHITTNEDFRAAGKS 93 (307)
T ss_dssp TTEEEEE--EEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSH-----HHHHHHHHHHHHHHTSTTTC-----
T ss_pred CCeeEEE--EecCCC-CCcccceEEEEecCCCCCCCeEEEEEECCCCCHH-----HHHHHHHHHHHHHHhhHhhhhcccc
Confidence 3456666 566675 9999999987 2 357999999999999 9999998877655321000000
Q ss_pred -------CCCHHHHHHHHHHcc-------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccc
Q 010417 324 -------SIDPARVLEKAHSST-------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQH 383 (511)
Q Consensus 324 -------~~~~~e~L~~A~~~~-------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~ 383 (511)
..++.+.|++++.+. ...+|||++++++.+++++++||||||+|++|+|++.++|++|..
T Consensus 94 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~ 173 (307)
T 2p8e_A 94 GSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKP 173 (307)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCT
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCC
Confidence 012345566655432 123579999999999999999999999999999999999998843
Q ss_pred cc-----------------------CCccceecCCCC----------CCCCcceEEEEecCCCC-EEEEEccCCCCCCCH
Q 010417 384 DF-----------------------NFTYQLEYGSNS----------DLPSSGQVFTIPVAPGD-VIIAGTDGLFDNLYN 429 (511)
Q Consensus 384 ~~-----------------------n~p~qL~~g~~~----------d~p~~pdV~~i~L~~gD-~LVL~SDGLwD~Ls~ 429 (511)
.. ...+.++..... ....+|++..++++++| |||||||||||+|++
T Consensus 174 ~~~~E~~rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~ 253 (307)
T 2p8e_A 174 CNPREKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSN 253 (307)
T ss_dssp TSHHHHHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCH
T ss_pred CCHHHHHHHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCH
Confidence 11 011112211000 12356899999999987 899999999999999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCCC
Q 010417 430 NEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 430 eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
+||++++.+.+....+++++|+.|++.|++ +|+.|||||||+++...+.
T Consensus 254 ~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~-----------------------~g~~DNiTvivv~~~~~~~ 302 (307)
T 2p8e_A 254 EELCEYVKSRLEVSDDLENVCNWVVDTCLH-----------------------KGSRDNMSIVLVCFSNEGH 302 (307)
T ss_dssp HHHHHHHHHHHTTCCCHHHHHHHHHHHHHH-----------------------TTCCSCEEEEEEEC-----
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHH-----------------------cCCCCCeEEEEEECCCCCc
Confidence 999999998766667999999999999998 7899999999999987653
No 4
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-33 Score=281.97 Aligned_cols=215 Identities=20% Similarity=0.253 Sum_probs=153.8
Q ss_pred EEEEEEEecCCCCCCCCCCCceEEe-----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHH
Q 010417 256 KLLSGACCLPHPDKEETGGEDAHFI-----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARV 330 (511)
Q Consensus 256 rl~~gs~~~s~~Gk~R~~NEDa~~V-----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~ 330 (511)
++.+|. .++.| .|..|||++++ .+..+|+|||||||+. ++++|++.+...+...... ...++.+.
T Consensus 22 ~~~~~~--~s~~G-~R~~nED~~~~~~~~~~~~~l~~V~DGhGG~~-----~a~~as~~~~~~l~~~~~~--~~~~~~~~ 91 (304)
T 2i0o_A 22 FLASGS--SSMQG-WRISQEDAHNCILNFDDQCSFFAVYDGHGGAE-----VAQYCSLHLPTFLKTVEAY--GRKEFEKA 91 (304)
T ss_dssp SEEEEE--EEEEE-SSSCCCEEEEEEEEEETTEEEEEEEECSSCSH-----HHHHHHHHHHHHHHHSHHH--HTTCHHHH
T ss_pred ceEEEE--eecCC-CCCCccCEEEEEeccCCCeEEEEEEcCCCCHH-----HHHHHHHHHHHHHHhhhhc--ccccHHHH
Confidence 455666 45567 49999999977 2567999999999999 9999998877666432211 11245556
Q ss_pred HHHHHHcc---------------------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccc
Q 010417 331 LEKAHSST---------------------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQH 383 (511)
Q Consensus 331 L~~A~~~~---------------------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~ 383 (511)
|++++.+. ...+|||++++++.+++++++||||||+|++|+|+++++|.+|..
T Consensus 92 l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~ 171 (304)
T 2i0o_A 92 LKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKP 171 (304)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCT
T ss_pred HHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCC
Confidence 65554321 223679999999999999999999999999999999999998843
Q ss_pred cc--------------------CCccceec--CCCC------------CCCCcceEEEEecCCCC-EEEEEccCCCCCCC
Q 010417 384 DF--------------------NFTYQLEY--GSNS------------DLPSSGQVFTIPVAPGD-VIIAGTDGLFDNLY 428 (511)
Q Consensus 384 ~~--------------------n~p~qL~~--g~~~------------d~p~~pdV~~i~L~~gD-~LVL~SDGLwD~Ls 428 (511)
.. +....++. |... ....+|++..++++++| |||||||||||+|+
T Consensus 172 ~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~ 251 (304)
T 2i0o_A 172 EDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMT 251 (304)
T ss_dssp TSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCC
T ss_pred cCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCC
Confidence 11 00111111 1110 11347899999999998 57999999999999
Q ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEe
Q 010417 429 NNEITAVVVHAMRA-GLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYIT 497 (511)
Q Consensus 429 ~eEI~~iV~~~l~~-g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~ 497 (511)
++||++++.+.+.. +.+++++|+.|++.|+.+.. . ..+++.||||||||+++
T Consensus 252 ~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~------------~-----g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 252 SEQVVQFVQERINKPGMKLSKICEELFDHCLAPHT------------R-----GDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC-----------------------------CEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhh------------c-----cCCCCCCCeEEEEEEeC
Confidence 99999999987655 57899999999999987210 0 01367899999999974
No 5
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=2.4e-33 Score=287.89 Aligned_cols=212 Identities=21% Similarity=0.270 Sum_probs=157.1
Q ss_pred EEEEecCCCCCCCCCCCceEEe-c------------------------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHH
Q 010417 259 SGACCLPHPDKEETGGEDAHFI-S------------------------DKQAIGVADGVGGWANHGVNAGLYSRELMSNS 313 (511)
Q Consensus 259 ~gs~~~s~~Gk~R~~NEDa~~V-~------------------------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~ 313 (511)
+|.+.+ .| .|..|||++++ + +..+|+|||||||+. ++++|++.+...
T Consensus 16 ~G~~s~--~G-~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~-----~~~~as~~~~~~ 87 (337)
T 3qn1_B 16 WGTVSI--QG-NRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHK-----VADYCRDRLHFA 87 (337)
T ss_dssp EEEEEE--CT-TSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSH-----HHHHHHHHHHHH
T ss_pred eEEEEe--ee-CCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChh-----HHHHHHHHHHHH
Confidence 566443 44 69999999988 2 356999999999999 999999988776
Q ss_pred HHHH-HcCCCC----------CCCHHHHHHHHHHcc------------------------CcCCCceEEEEEEeCCeEEE
Q 010417 314 VAAI-QEEPDG----------SIDPARVLEKAHSST------------------------RAKGSSTACIIALTDQGLRA 358 (511)
Q Consensus 314 l~~l-~~~~~~----------~~~~~e~L~~A~~~~------------------------~~~GGSTavvalI~~~~L~V 358 (511)
+... ...... ...+.+.|++++.+. ...+|||++++++.++++++
T Consensus 88 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~ 167 (337)
T 3qn1_B 88 LAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVV 167 (337)
T ss_dssp HHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEE
T ss_pred HHHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEE
Confidence 6543 221110 123445666665432 12357999999999999999
Q ss_pred EEEcCCcEEEEeCCeEEEcCcccccc----------------------cCCccceec--CC---CCCCCCcceEEEEec-
Q 010417 359 INLGDSGFVVVRDGCTVFRSPVQQHD----------------------FNFTYQLEY--GS---NSDLPSSGQVFTIPV- 410 (511)
Q Consensus 359 ANVGDSRayLiRdG~li~lS~~q~~~----------------------~n~p~qL~~--g~---~~d~p~~pdV~~i~L- 410 (511)
+||||||+|++|+|++.++|.+|... .+....++. |. ......+|++..+++
T Consensus 168 anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~ 247 (337)
T 3qn1_B 168 SNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRS 247 (337)
T ss_dssp EEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECC
T ss_pred EeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeC
Confidence 99999999999999999999998421 011111111 11 112234689999998
Q ss_pred CCCCEEEEEccCCCCCCCHHHHHHHHHHHHhC-----------------CCCHHHHHHHHHHHHHhhccccCCCCcchhh
Q 010417 411 APGDVIIAGTDGLFDNLYNNEITAVVVHAMRA-----------------GLGPQVTAQKIAALARQRAQDKDRQTPFSTA 473 (511)
Q Consensus 411 ~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~-----------------g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~ 473 (511)
++||+||||||||||+|+++||++++.+.+.. ..+++++|+.|++.|+.
T Consensus 248 ~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~-------------- 313 (337)
T 3qn1_B 248 REDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ-------------- 313 (337)
T ss_dssp TTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHH--------------
T ss_pred CCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHH--------------
Confidence 57899999999999999999999999864321 24578999999999999
Q ss_pred hhhcccccCCCCcCCeEEEEEEEecCCC
Q 010417 474 AQDAGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 474 a~~~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
+|+.||||||||++...+.
T Consensus 314 ---------~g~~DNiTvivv~l~~~~~ 332 (337)
T 3qn1_B 314 ---------KGSKDNISIIVIDLKAQRK 332 (337)
T ss_dssp ---------TTCCSCEEEEEEECCSCC-
T ss_pred ---------cCCCCCEEEEEEEecCCcc
Confidence 7899999999999987643
No 6
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=4.2e-33 Score=283.14 Aligned_cols=213 Identities=22% Similarity=0.202 Sum_probs=157.1
Q ss_pred EEEEEecCCCCCCCCCCCceEEe-c-------------------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 010417 258 LSGACCLPHPDKEETGGEDAHFI-S-------------------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAI 317 (511)
Q Consensus 258 ~~gs~~~s~~Gk~R~~NEDa~~V-~-------------------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l 317 (511)
.+|. .++.| .|+.|||++++ + +..+|+|||||||+. ++++|++++...+...
T Consensus 10 ~~g~--~s~~G-~R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~-----~~~~as~~~~~~l~~~ 81 (316)
T 3kdj_B 10 LYGF--TSICG-RRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQ-----VANYCRERMHLALAEE 81 (316)
T ss_dssp CEEE--EEECT-TSSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSH-----HHHHHHHHHHHHHHHH
T ss_pred eEEE--EEeEe-CCCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHH
Confidence 4454 44455 59999999987 2 457999999999999 9999998887766433
Q ss_pred H-cCCCCC-------CCHHHHHHHHHHcc--------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccc
Q 010417 318 Q-EEPDGS-------IDPARVLEKAHSST--------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQ 381 (511)
Q Consensus 318 ~-~~~~~~-------~~~~e~L~~A~~~~--------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q 381 (511)
. ...... ..+.+.|++++.+. ...+|||++++++.+++++++|+||||+|++|+|++.++|.+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH 161 (316)
T 3kdj_B 82 IAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDH 161 (316)
T ss_dssp HHHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCC
T ss_pred HHhhhcccccccchHHHHHHHHHHHHHHHHHHHhcccCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCC
Confidence 2 211110 11345566665432 2346799999999999999999999999999999999999998
Q ss_pred cccc-----------------CC---------ccceecCC-CCCCCCcceEEEEe-cCCCCEEEEEccCCCCCCCHHHHH
Q 010417 382 QHDF-----------------NF---------TYQLEYGS-NSDLPSSGQVFTIP-VAPGDVIIAGTDGLFDNLYNNEIT 433 (511)
Q Consensus 382 ~~~~-----------------n~---------p~qL~~g~-~~d~p~~pdV~~i~-L~~gD~LVL~SDGLwD~Ls~eEI~ 433 (511)
.... +. ...++... ......+|++..++ +++||+||||||||||+|+++||+
T Consensus 162 ~~~~~~e~~ri~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~ 241 (316)
T 3kdj_B 162 KPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEAC 241 (316)
T ss_dssp CTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHH
T ss_pred CCCCHHHHHHHHHcCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHH
Confidence 5310 00 01111100 11223568998888 779999999999999999999999
Q ss_pred HHHHHHHh-----------------------CCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeE
Q 010417 434 AVVVHAMR-----------------------AGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDIT 490 (511)
Q Consensus 434 ~iV~~~l~-----------------------~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNIT 490 (511)
+++.+.+. ...+++++|+.|++.|++ +|+.||||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~-----------------------~g~~DNiT 298 (316)
T 3kdj_B 242 EMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQ-----------------------RGSKDNIS 298 (316)
T ss_dssp HHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHHHHHH-----------------------TTCCSCEE
T ss_pred HHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHHHHHH-----------------------cCCCCCeE
Confidence 99987321 123578999999999999 79999999
Q ss_pred EEEEEEecCCC
Q 010417 491 VVVSYITNCED 501 (511)
Q Consensus 491 VIVV~i~~~~~ 501 (511)
||||++...+.
T Consensus 299 vivv~l~~~~~ 309 (316)
T 3kdj_B 299 VVVVDLKPRRK 309 (316)
T ss_dssp EEEEECSCC--
T ss_pred EEEEEccCCCc
Confidence 99999987643
No 7
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=275.53 Aligned_cols=201 Identities=20% Similarity=0.197 Sum_probs=155.0
Q ss_pred cCCCCCCCCCCCceEEe----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcc-
Q 010417 264 LPHPDKEETGGEDAHFI----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSST- 338 (511)
Q Consensus 264 ~s~~Gk~R~~NEDa~~V----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A~~~~- 338 (511)
.+++|. |+.|||++++ ++..+|+|||||||+. ++++|++.+...+...... ..++.+.|++++.+.
T Consensus 13 ~s~~G~-R~~nED~~~~~~~~~~~~l~~V~DG~GG~~-----~a~~as~~~~~~l~~~~~~---~~~~~~~l~~a~~~~~ 83 (274)
T 2iq1_A 13 ASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPA-----AADFCHTHMEKCIMDLLPK---EKNLETLLTLAFLEID 83 (274)
T ss_dssp EEECCS-SSSCCEEEEEEECSSSEEEEEEEEEESSTH-----HHHHHHHHHHHHHHHHTTT---CCCHHHHHHHHHHHHH
T ss_pred EecccC-CCCccceEEEeeCCCCeEEEEEECCCCCHH-----HHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHH
Confidence 577886 9999999988 3567999999999998 9999998887776655432 235666666654321
Q ss_pred --------------CcCCCceEEEEEEeC-CeEEEEEEcCCcEEEEeCCeEEEcCccccccc------------------
Q 010417 339 --------------RAKGSSTACIIALTD-QGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF------------------ 385 (511)
Q Consensus 339 --------------~~~GGSTavvalI~~-~~L~VANVGDSRayLiRdG~li~lS~~q~~~~------------------ 385 (511)
....|||++++++.+ ++++++|+||||+|++|+|++.++|.+|....
T Consensus 84 ~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~~ 163 (274)
T 2iq1_A 84 KAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNS 163 (274)
T ss_dssp HHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEECT
T ss_pred HHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEcCC
Confidence 123569999998885 58999999999999999999999999885320
Q ss_pred ------CCccceec--CCCC----CCCCcceEEEEecCCC--CEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHH
Q 010417 386 ------NFTYQLEY--GSNS----DLPSSGQVFTIPVAPG--DVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQ 451 (511)
Q Consensus 386 ------n~p~qL~~--g~~~----d~p~~pdV~~i~L~~g--D~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~ 451 (511)
+....++. |... ....+|++..++++++ ++||||||||||+|+++|+.+++.+. .+|+++|+
T Consensus 164 ~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~----~~~~~~a~ 239 (274)
T 2iq1_A 164 LGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC----HDPNEAAH 239 (274)
T ss_dssp TSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTS----SSHHHHHH
T ss_pred CCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHc----CCHHHHHH
Confidence 00011111 1110 1234689999999975 59999999999999999999998753 68999999
Q ss_pred HHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCC
Q 010417 452 KIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCE 500 (511)
Q Consensus 452 ~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~ 500 (511)
.|++.|++ +|+.|||||||+++....
T Consensus 240 ~L~~~A~~-----------------------~g~~DNiTvivv~~~~~~ 265 (274)
T 2iq1_A 240 AVTEQAIQ-----------------------YGTEDNSTAVVVPFGAWG 265 (274)
T ss_dssp HHHHHHHH-----------------------TTCCSCEEEEEEECTTC-
T ss_pred HHHHHHHH-----------------------cCCCCCeEEEEEEccCCC
Confidence 99999998 688999999999997653
No 8
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00 E-value=2.5e-32 Score=264.30 Aligned_cols=200 Identities=23% Similarity=0.251 Sum_probs=148.0
Q ss_pred ecCCCCCCCCCCCceEEe--cCCe-EEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC-C-CCCHHHHHHHHHHc
Q 010417 263 CLPHPDKEETGGEDAHFI--SDKQ-AIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPD-G-SIDPARVLEKAHSS 337 (511)
Q Consensus 263 ~~s~~Gk~R~~NEDa~~V--~d~~-lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~-~-~~~~~e~L~~A~~~ 337 (511)
+.+++|+.|+.|||++ + .+.. +|+|||||||+. +++++++++...+..+..... . ..++.+.|++++.+
T Consensus 5 ~~s~~G~~r~~neD~~-~~~~~~~~~~~V~DG~Gg~~-----~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 78 (240)
T 2j82_A 5 GLTDCGLIRKSNQDAF-YIDEKHQRFFIVADGMGGHA-----GGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLA 78 (240)
T ss_dssp EEEECCSSCSSCCEEE-EECTTTCCEEEEEEBC---C-----HHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred EeCCCCCCCCcCCCcc-EecCCCCeEEEEEcCCCCch-----HHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Confidence 3688998899999999 6 3223 999999999998 888888887766644322110 0 22455556555433
Q ss_pred c------------CcC-CCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccc--------------cCCc
Q 010417 338 T------------RAK-GSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHD--------------FNFT 388 (511)
Q Consensus 338 ~------------~~~-GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~--------------~n~p 388 (511)
. ... .|||++++++. +++++++|+||||+|++|+|++.++|.+|... ...|
T Consensus 79 ~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~~~g~i~~~~~~~~~ 158 (240)
T 2j82_A 79 ANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQLGSLTIEQARQHP 158 (240)
T ss_dssp HHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHHC---------------
T ss_pred HHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHHHHHcCCCCHHHHhcCC
Confidence 2 112 36999999999 88999999999999999999999999888531 1223
Q ss_pred cc--eecCCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCC
Q 010417 389 YQ--LEYGSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDR 466 (511)
Q Consensus 389 ~q--L~~g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~ 466 (511)
.+ ++...+.....+|++..+++++||+||||||||||+++++|+.+++. ..+++++|+.|++.|++
T Consensus 159 ~~~~ltralG~~~~~~p~~~~~~l~~gd~lll~SDGl~d~l~~~~i~~~l~-----~~~~~~~a~~l~~~a~~------- 226 (240)
T 2j82_A 159 WRHVLSQCLGREDLSQIDIQPIDLEPGDRLLLCSDGLTEELTDDVISIYLS-----EPNVQKAAAALVDAAKT------- 226 (240)
T ss_dssp -CCCBSCCBSCTTCCCCEEEEEECCTTCEEEEECHHHHTTSCHHHHHHHHT-----CSSHHHHHHHHHHHHHH-------
T ss_pred CcCeEeecCCCCCceeEEEEEEeeCCCCEEEEECCCCCCCCCHHHHHHHHc-----cCCHHHHHHHHHHHHHH-------
Confidence 32 22111112234689999999999999999999999999999999986 36899999999999998
Q ss_pred CCcchhhhhhcccccCCCCcCCeEEEEEEE
Q 010417 467 QTPFSTAAQDAGFRYYGGKLDDITVVVSYI 496 (511)
Q Consensus 467 ~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i 496 (511)
+|+.|||||||+++
T Consensus 227 ----------------~g~~DniTvivv~~ 240 (240)
T 2j82_A 227 ----------------HGGRDNVTVVVISV 240 (240)
T ss_dssp ----------------TTCCSCEEEEEEEC
T ss_pred ----------------cCCCCCeEEEEEeC
Confidence 57889999999974
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-32 Score=277.52 Aligned_cols=211 Identities=20% Similarity=0.248 Sum_probs=156.1
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe-c-------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHH---HHc------
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI-S-------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAA---IQE------ 319 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V-~-------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~---l~~------ 319 (511)
+.++. .+++|. |+.|||++++ . +..+|+|||||||+. ++++|++++...+.. +.+
T Consensus 22 ~~~~~--~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~-----~~~~as~~~~~~l~~~~~~~~~~~~l~ 93 (324)
T 2i44_A 22 FDAAI--FTDIGG-RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDF-----ASENVKDLVVPQLISSPAWQEVTEMLR 93 (324)
T ss_dssp EEEEE--EEECTT-SSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSH-----HHHHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred eEEEE--EECCCC-CCccCCeEEEEecCCCCCCCeEEEEEeCCCCchH-----HHHHHHHHHHHHHHhhhHHHHHHHHhh
Confidence 44555 678897 9999999988 3 246999999999999 999999888766542 221
Q ss_pred -CCC-------CCCCHHHHHHHHHHcc------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeC---C-eEE
Q 010417 320 -EPD-------GSIDPARVLEKAHSST------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRD---G-CTV 375 (511)
Q Consensus 320 -~~~-------~~~~~~e~L~~A~~~~------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRd---G-~li 375 (511)
... ...++.+.|++++.+. ...+|+|++++++.+++++++||||||+|++|+ | ++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~~ 173 (324)
T 2i44_A 94 SDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNCE 173 (324)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEEE
T ss_pred ccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEeccCCCceEE
Confidence 000 0012244555554332 223445555666889999999999999999996 7 899
Q ss_pred EcCcccccccC------------------Ccc-------ce--e--cCC-----------------CCCCCCcceEEEEe
Q 010417 376 FRSPVQQHDFN------------------FTY-------QL--E--YGS-----------------NSDLPSSGQVFTIP 409 (511)
Q Consensus 376 ~lS~~q~~~~n------------------~p~-------qL--~--~g~-----------------~~d~p~~pdV~~i~ 409 (511)
++|.+|..... .+. .+ + .|. ......+|++..++
T Consensus 174 ~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~ 253 (324)
T 2i44_A 174 FLTVDHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVR 253 (324)
T ss_dssp ESCCCCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEE
T ss_pred ECCCCCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEE
Confidence 99998854211 110 01 0 111 00113478999999
Q ss_pred cCCCC-EEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCc
Q 010417 410 VAPGD-VIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQV--TAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKL 486 (511)
Q Consensus 410 L~~gD-~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~--aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~ 486 (511)
++++| |||||||||||+|+++||++++.+.+..+.++++ +|+.|++.|++ +|+.
T Consensus 254 l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~-----------------------~g~~ 310 (324)
T 2i44_A 254 VTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSR-----------------------NQSA 310 (324)
T ss_dssp CCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT-----------------------TCCC
T ss_pred cCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh-----------------------cCCC
Confidence 99998 9999999999999999999999988777779999 99999999998 7999
Q ss_pred CCeEEEEEEEec
Q 010417 487 DDITVVVSYITN 498 (511)
Q Consensus 487 DNITVIVV~i~~ 498 (511)
||||||||++..
T Consensus 311 DNiTvivv~~~~ 322 (324)
T 2i44_A 311 DNITAMTVFFKK 322 (324)
T ss_dssp CCEEEEEEEEC-
T ss_pred CCCEEEEEEeeC
Confidence 999999999864
No 10
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=3.2e-32 Score=284.98 Aligned_cols=204 Identities=21% Similarity=0.213 Sum_probs=158.1
Q ss_pred ecCCCCCCCCCCCceEEe----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcc
Q 010417 263 CLPHPDKEETGGEDAHFI----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSST 338 (511)
Q Consensus 263 ~~s~~Gk~R~~NEDa~~V----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A~~~~ 338 (511)
+.++.|+ |+.|||++++ ++..+|+|||||||+. ++++|++++...+...... ..++.++|++++...
T Consensus 126 ~~s~~G~-R~~NED~~~~~~~~~~~~l~~VaDG~GG~~-----~g~~as~~~~~~l~~~~~~---~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 126 CASQIGK-RKENEDRFDFAQLTDEVLYFAVYDGHGGPA-----AADFCHTHMEKCIMDLLPK---EKNLETLLTLAFLEI 196 (389)
T ss_dssp EEEECTT-SSSCCEEEEEEECSSSEEEEEEEEEESSTH-----HHHHHHHHHHHHHHHHTTT---CCCHHHHHHHHHHHH
T ss_pred EecCCCC-CCCCcceeeeeecCCCEEEEEEEECCCCHH-----HHHHHHHHHHHHHHHHhcc---ccCHHHHHHHHHHHH
Confidence 3778886 9999999988 3567999999999999 9999999988777655433 345666666655432
Q ss_pred ---------------CcCCCceEEEEEEeCC-eEEEEEEcCCcEEEEeCCeEEEcCccccccc-----------------
Q 010417 339 ---------------RAKGSSTACIIALTDQ-GLRAINLGDSGFVVVRDGCTVFRSPVQQHDF----------------- 385 (511)
Q Consensus 339 ---------------~~~GGSTavvalI~~~-~L~VANVGDSRayLiRdG~li~lS~~q~~~~----------------- 385 (511)
...+|||++++++.++ +++++||||||+|++|+|++.++|.+|....
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~ 276 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 276 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecc
Confidence 1235799999998876 8999999999999999999999999885321
Q ss_pred -------CCccceec--CCCC----CCCCcceEEEEecCC--CCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHH
Q 010417 386 -------NFTYQLEY--GSNS----DLPSSGQVFTIPVAP--GDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTA 450 (511)
Q Consensus 386 -------n~p~qL~~--g~~~----d~p~~pdV~~i~L~~--gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA 450 (511)
+....++. |... ....+|++..+++++ +|+||||||||||+|+++||.+++.+. .+++++|
T Consensus 277 ~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il~~~----~~~~~~a 352 (389)
T 4da1_A 277 SLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC----HDPNEAA 352 (389)
T ss_dssp ---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHHHHS----SSHHHHH
T ss_pred cCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHHHhc----CCHHHHH
Confidence 00111111 1100 134568999999985 569999999999999999999999763 6899999
Q ss_pred HHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCCCc
Q 010417 451 QKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCEDV 502 (511)
Q Consensus 451 ~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~~~ 502 (511)
+.|++.|+. +|+.||||||||++......
T Consensus 353 ~~Lv~~A~~-----------------------~g~~DNiTvivv~~~~~~~~ 381 (389)
T 4da1_A 353 HAVTEQAIQ-----------------------YGTEDNSTAVVVPFGAWGKY 381 (389)
T ss_dssp HHHHHHHHH-----------------------HTCCSCEEEEEEEECCC---
T ss_pred HHHHHHHHH-----------------------cCCCCCeEEEEEEecCCCCC
Confidence 999999998 68899999999999876543
No 11
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.98 E-value=9.3e-32 Score=259.64 Aligned_cols=201 Identities=23% Similarity=0.288 Sum_probs=149.9
Q ss_pred ceEEEEEEEecCCCCCCCCCCCceEEecCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 010417 254 TLKLLSGACCLPHPDKEETGGEDAHFISDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEK 333 (511)
Q Consensus 254 ~lrl~~gs~~~s~~Gk~R~~NEDa~~V~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~ 333 (511)
+..+.++. .+++|+.|+.|||++++ +..+|+|||||||+ |..++.++.+.+...+ ...+ + .+.|++
T Consensus 3 ~~~~~~~~--~s~~G~~r~~neD~~~~-~~~~~~V~DG~Gg~---G~~as~~~~~~l~~~~---~~~~----~-~~~l~~ 68 (234)
T 2jfr_A 3 ASVLSAAT--ATDQGPVRENNQDACLA-DGILYAVADGFGAR---GHHASATALKTLSAGF---AAAP----D-RDGLLE 68 (234)
T ss_dssp CSEEEEEE--EEECCSSCSSCCEEEEE-ETTEEEEEEEESTT---HHHHHHHHHHHHHHHH---HHSC----S-HHHHHH
T ss_pred ceeEEEEE--ecCCCCCCCcCCCccee-CCcEEEEEeCCCcc---HHHHHHHHHHHHHHHH---hcCC----c-HHHHHH
Confidence 34555655 78899889999999987 77899999999988 2225555544444332 2211 1 333444
Q ss_pred HHHcc--------C---cCCCceEEEEEEeCCe---EEEEEEcCCcEEEEeCCeEEEcCcccccc--------------c
Q 010417 334 AHSST--------R---AKGSSTACIIALTDQG---LRAINLGDSGFVVVRDGCTVFRSPVQQHD--------------F 385 (511)
Q Consensus 334 A~~~~--------~---~~GGSTavvalI~~~~---L~VANVGDSRayLiRdG~li~lS~~q~~~--------------~ 385 (511)
++.+. . ...|||++++++.+++ ++++|+||||+|++|+|++.++|.+|... .
T Consensus 69 ~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g~i~~~~~~ 148 (234)
T 2jfr_A 69 AVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEAR 148 (234)
T ss_dssp HHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHHHHHTTSSCHHHHT
T ss_pred HHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHHHHHcCCCCHHHHh
Confidence 33221 1 1156999999999888 99999999999999999999999888541 2
Q ss_pred CCccce--ecCCCCCCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccc
Q 010417 386 NFTYQL--EYGSNSDLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQD 463 (511)
Q Consensus 386 n~p~qL--~~g~~~d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d 463 (511)
+.|.++ +...+.....+|++..+++++||+||||||||||+++++|+.+++ + ..+++++|+.|++.|++
T Consensus 149 ~~~~~~~~tralG~~~~~~~~~~~~~l~~gd~lll~SDGl~d~~~~~~i~~~~-~----~~~~~~~a~~l~~~a~~---- 219 (234)
T 2jfr_A 149 WHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAA-T----SPDPQVAVRRLVEVAND---- 219 (234)
T ss_dssp TCTTTTCBSCCBSSSSCCCCEEEECCCCTTCEEEEECGGGGTTSCHHHHHHHH-T----CSSHHHHHHHHHHHHHH----
T ss_pred cCcccceeeecCcCCCCceeEEEEEecCCCCEEEEECCCCccccCHHHHHHHH-c----cCCHHHHHHHHHHHHHH----
Confidence 233332 111111223468999999999999999999999999999999998 4 36899999999999998
Q ss_pred cCCCCcchhhhhhcccccCCCCcCCeEEEEEEE
Q 010417 464 KDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYI 496 (511)
Q Consensus 464 ~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i 496 (511)
+|+.|||||||+++
T Consensus 220 -------------------~g~~DniTvivv~~ 233 (234)
T 2jfr_A 220 -------------------AGGSDNTTVVVIDL 233 (234)
T ss_dssp -------------------TTCCSCEEEEEEEE
T ss_pred -------------------cCCCCCeEEEEEEe
Confidence 67889999999987
No 12
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.97 E-value=7.8e-32 Score=281.88 Aligned_cols=214 Identities=18% Similarity=0.184 Sum_probs=160.1
Q ss_pred eEEEEEEEecCCCCCCCCCCCceEEe-c-------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHH---HHcCCC-
Q 010417 255 LKLLSGACCLPHPDKEETGGEDAHFI-S-------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAA---IQEEPD- 322 (511)
Q Consensus 255 lrl~~gs~~~s~~Gk~R~~NEDa~~V-~-------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~---l~~~~~- 322 (511)
..+.+|. .++.|. |..|||++++ . +..+|+|||||||+. ++++|++.+...+.. +.....
T Consensus 20 ~~l~~g~--~s~~G~-R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~-----aa~~as~~l~~~l~~~~~~~~~~~~ 91 (382)
T 1a6q_A 20 NGLRYGL--SSMQGW-RVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQ-----VAKYCCEHLLDHITNNQDFKGSAGA 91 (382)
T ss_dssp TTEEEEE--EEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSH-----HHHHHHHHHHHHHHTSHHHHCSSSS
T ss_pred CceEEEE--EecCCC-CCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHH-----HHHHHHHHHHHHHHhhhhhhccCCC
Confidence 3456666 456675 9999999987 2 247999999999999 999999887766542 322110
Q ss_pred -CCCCHHHHHHHHHHcc-------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCCeEEEcCccccccc---
Q 010417 323 -GSIDPARVLEKAHSST-------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF--- 385 (511)
Q Consensus 323 -~~~~~~e~L~~A~~~~-------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~--- 385 (511)
....+.+.|++++... ...+|||++++++.+++++++||||||+|++|+|++.++|.+|....
T Consensus 92 ~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E 171 (382)
T 1a6q_A 92 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 171 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHH
Confidence 0112344555554321 12457999999999999999999999999999999999999884311
Q ss_pred ----------------CCccceec--CCC------------CCCCCcceEEEEecC-CC-CEEEEEccCCCCCCCHHHHH
Q 010417 386 ----------------NFTYQLEY--GSN------------SDLPSSGQVFTIPVA-PG-DVIIAGTDGLFDNLYNNEIT 433 (511)
Q Consensus 386 ----------------n~p~qL~~--g~~------------~d~p~~pdV~~i~L~-~g-D~LVL~SDGLwD~Ls~eEI~ 433 (511)
+....++. |.. .....+|++..+++. ++ ||||||||||||+|+++||+
T Consensus 172 ~~RI~~~gg~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~ 251 (382)
T 1a6q_A 172 KERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC 251 (382)
T ss_dssp HHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred HHHHHhcCcEEecccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHH
Confidence 10011111 110 011346899999998 64 69999999999999999999
Q ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecC
Q 010417 434 AVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNC 499 (511)
Q Consensus 434 ~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~ 499 (511)
+++...+....+++++|+.|++.|+. +|+.||||||||++...
T Consensus 252 ~~v~~~~~~~~~~~~~a~~Lv~~A~~-----------------------~g~~DNiTvivv~~~~~ 294 (382)
T 1a6q_A 252 DFVRSRLEVTDDLEKVCNEVVDTCLY-----------------------KGSRDNMSVILICFPNA 294 (382)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHH-----------------------TTCCSCEEEEEEECTTS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHh-----------------------cCCcCCEEEEEEEecCC
Confidence 99998776667999999999999998 68999999999998754
No 13
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.97 E-value=6.6e-32 Score=283.90 Aligned_cols=217 Identities=16% Similarity=0.194 Sum_probs=152.9
Q ss_pred CCCCCCCCCceEEe----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC---CCCCHHHHHHHHHHcc-
Q 010417 267 PDKEETGGEDAHFI----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPD---GSIDPARVLEKAHSST- 338 (511)
Q Consensus 267 ~Gk~R~~NEDa~~V----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~---~~~~~~e~L~~A~~~~- 338 (511)
+|+.|..|||++++ .+..+|+|||||||+. ++++|++.+...+.. .... ...++.+.|+++|..+
T Consensus 42 ~~~~r~~nED~~~~~~~~~~~~lf~V~DGhGG~~-----aa~~as~~l~~~l~~--~~~~~~~~~~~~~~~l~~af~~~~ 114 (401)
T 2j4o_A 42 KGTESHPPEDSWLKFRSENNCFLYGVFNGYDGNR-----VTNFVAQRLSAELLL--GQLNAEHAEADVRRVLLQAFDVVE 114 (401)
T ss_dssp SCEECCCCCEEEEEEEETTTEEEEEEEEEESSSH-----HHHHHHHHHHHTTSS--SSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCceEEEecCCCCeEEEEEEcCCCCHH-----HHHHHHHHHHHHHHH--hhhhcccchhhHHHHHHHHHHHHH
Confidence 44455689999988 3567999999999999 999999887653311 0000 0112334454444321
Q ss_pred ----------------------------------------------CcCCCceEEEEEEeCCeEEEEEEcCCcEEEEeCC
Q 010417 339 ----------------------------------------------RAKGSSTACIIALTDQGLRAINLGDSGFVVVRDG 372 (511)
Q Consensus 339 ----------------------------------------------~~~GGSTavvalI~~~~L~VANVGDSRayLiRdG 372 (511)
...+|||+++++|.+++++||||||||+||+|++
T Consensus 115 ~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~ 194 (401)
T 2j4o_A 115 RSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST 194 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEEC
T ss_pred HHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCEEEEEEccCceEEEEEcC
Confidence 1236799999999999999999999999999988
Q ss_pred ----eEEEcCccccccc----------------------CCccceec--CCC-----------------CCCCCcceEEE
Q 010417 373 ----CTVFRSPVQQHDF----------------------NFTYQLEY--GSN-----------------SDLPSSGQVFT 407 (511)
Q Consensus 373 ----~li~lS~~q~~~~----------------------n~p~qL~~--g~~-----------------~d~p~~pdV~~ 407 (511)
+++++|.+|.... +....++. |.. .....+|++..
T Consensus 195 ~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~ 274 (401)
T 2j4o_A 195 VDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHG 274 (401)
T ss_dssp SSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEE
T ss_pred CCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEE
Confidence 9999999884311 00001111 110 11234689995
Q ss_pred -EecCCCC-EEEEEccCCCCCC--------CHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhc
Q 010417 408 -IPVAPGD-VIIAGTDGLFDNL--------YNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDA 477 (511)
Q Consensus 408 -i~L~~gD-~LVL~SDGLwD~L--------s~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~ 477 (511)
+++.++| |||||||||||+| +++||+++|.+.+..+.+++++|+.|+++|++++.+.. ..
T Consensus 275 ~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~----------~~ 344 (401)
T 2j4o_A 275 AQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTF----------AS 344 (401)
T ss_dssp EEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHH----------HS
T ss_pred eEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhh----------hc
Confidence 9999887 8999999999999 89999999998776667999999999999987442211 01
Q ss_pred c--cccCCCCcCCeEEEEEEEecCC
Q 010417 478 G--FRYYGGKLDDITVVVSYITNCE 500 (511)
Q Consensus 478 g--~~~~~Gs~DNITVIVV~i~~~~ 500 (511)
| ++...++.||||||||++....
T Consensus 345 G~~~~~~~~~~DNiTvivv~~~~~~ 369 (401)
T 2j4o_A 345 GGERARFCPRHEDMTLLVRNFGYPL 369 (401)
T ss_dssp CSSGGGGCSEECCEEEEEEEEBCCC
T ss_pred CCcccccCCCCCCeEEEEEEcCCCC
Confidence 0 0011235899999999998654
No 14
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.97 E-value=4.6e-32 Score=280.57 Aligned_cols=223 Identities=12% Similarity=0.111 Sum_probs=156.7
Q ss_pred ecCCCCCCCC--CCCceEEe----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHH-HHcCCCCCCCHHHHHHHHH
Q 010417 263 CLPHPDKEET--GGEDAHFI----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAA-IQEEPDGSIDPARVLEKAH 335 (511)
Q Consensus 263 ~~s~~Gk~R~--~NEDa~~V----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~-l~~~~~~~~~~~e~L~~A~ 335 (511)
..+..|.+|. .|||++++ .+..+|+|||||||+. ++++|++.+...+.. .........++.+.|+++|
T Consensus 24 ~~~~~G~r~~~~~nED~~~~~~~~~~~~lf~V~DGhGG~~-----aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~ 98 (358)
T 2irm_A 24 IYKDDGRRCEGYESRDKKCLCISDNNTSLYAILSGHNGVT-----VAENALQEMAAELLLGQLNVCNTDEAVKELIRQSF 98 (358)
T ss_dssp EECSSSCEEECSSCCEEEEEEECSSSEEEEEEEEEESCSH-----HHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHH
T ss_pred eeecCCCCCCCCCCCceEEEEECCCCEEEEEEEcCCCCHH-----HHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHH
Confidence 3556786554 69999987 3567999999999999 999999887654321 0000011112344555443
Q ss_pred Hcc------------------------------------------------CcCCCceEEEEEEeCCeEEEEEEcCCcEE
Q 010417 336 SST------------------------------------------------RAKGSSTACIIALTDQGLRAINLGDSGFV 367 (511)
Q Consensus 336 ~~~------------------------------------------------~~~GGSTavvalI~~~~L~VANVGDSRay 367 (511)
.++ ...+|||+++++|.+++++||||||||+|
T Consensus 99 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~ 178 (358)
T 2irm_A 99 MSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRAL 178 (358)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEE
T ss_pred HHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEE
Confidence 321 12367999999999999999999999999
Q ss_pred EEeC---C--eEEEcCccccccc------------------CCccceec--CC-----------------CCCCCCcceE
Q 010417 368 VVRD---G--CTVFRSPVQQHDF------------------NFTYQLEY--GS-----------------NSDLPSSGQV 405 (511)
Q Consensus 368 LiRd---G--~li~lS~~q~~~~------------------n~p~qL~~--g~-----------------~~d~p~~pdV 405 (511)
|+|+ | +++++|.+|.... ..+..++. |. ......+|++
T Consensus 179 l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~r~~g~llTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi 258 (358)
T 2irm_A 179 LCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEI 258 (358)
T ss_dssp EEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTTCBSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEE
T ss_pred EEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEeccCcCCEEcccCCcCHHHhccccccccccccCCCCEeccCeE
Confidence 9998 8 9999999984311 00011111 11 0123357899
Q ss_pred E-EEecCCCC-EEEEEccCCCCCCC----------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhh
Q 010417 406 F-TIPVAPGD-VIIAGTDGLFDNLY----------NNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTA 473 (511)
Q Consensus 406 ~-~i~L~~gD-~LVL~SDGLwD~Ls----------~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~ 473 (511)
. .+++.++| |||||||||||+|+ ++||+++|.+.+..+.+++++|+.|++.|++++.+. |...
T Consensus 259 ~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~~~~~-----~~~~ 333 (358)
T 2irm_A 259 VGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQNQSTLGGVAQSVVHRIVQAHHDT-----YMQL 333 (358)
T ss_dssp EEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHHHH-----HHHH
T ss_pred EEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhh-----hccc
Confidence 9 49999887 59999999999999 999999999887777899999999999998854331 1111
Q ss_pred hhhcccccCCC--CcCCeEEEEEEEec
Q 010417 474 AQDAGFRYYGG--KLDDITVVVSYITN 498 (511)
Q Consensus 474 a~~~g~~~~~G--s~DNITVIVV~i~~ 498 (511)
.. ....+| +.||||||||+|..
T Consensus 334 ~~---~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 334 VE---EHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HS---SSCCCCCCEECCEEEEEEESCC
T ss_pred cc---cccccCCCCCCCeEEEEEeCCC
Confidence 00 012246 89999999999864
No 15
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.97 E-value=1.1e-30 Score=271.57 Aligned_cols=217 Identities=20% Similarity=0.226 Sum_probs=156.6
Q ss_pred CccCCCcceEEEEEEEecCCCCCCCCCCCceEEe-c------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHc
Q 010417 247 QKISAGKTLKLLSGACCLPHPDKEETGGEDAHFI-S------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQE 319 (511)
Q Consensus 247 ~~~~~~~~lrl~~gs~~~s~~Gk~R~~NEDa~~V-~------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~ 319 (511)
+++.+..+..+.++. .++.|. |+.|||++++ . +..+|+|||||||.. +++++.+.+...+. +
T Consensus 3 ~~~~~~~~~~~~~~~--~s~~G~-R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~-----as~~a~~~l~~~l~---~ 71 (364)
T 2isn_A 3 KKVITVNEWYTTTVA--ATMLGR-RPTDEDAILVSAPATSRPNVRIKAVFDGHAGEA-----TSQYCAKHAAKHLG---K 71 (364)
T ss_dssp CEEEEEEETTEEEEE--EEECTT-SSSCCEEEEEECC----CCEEEEEEEEEESCSH-----HHHHHHHHHHHHHT---T
T ss_pred cEEEEecCCceEEEE--EEcCCC-CCcCCCeeEEeccCCCCCCeEEEEEEECCCCHH-----HHHHHHHHHHHHHH---H
Confidence 344444444456655 667785 9999999987 2 457999999999988 89998887765442 2
Q ss_pred CCCCCCCHHHHHHHHHHcc----------CcCCCceEEEEEEeC------------------------------------
Q 010417 320 EPDGSIDPARVLEKAHSST----------RAKGSSTACIIALTD------------------------------------ 353 (511)
Q Consensus 320 ~~~~~~~~~e~L~~A~~~~----------~~~GGSTavvalI~~------------------------------------ 353 (511)
... . +.+.|++++.+. ....|||++++++.+
T Consensus 72 ~~~--~-~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~ 148 (364)
T 2isn_A 72 LSE--F-TFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEA 148 (364)
T ss_dssp CSS--C-CHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC
T ss_pred hhc--c-cHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhc
Confidence 111 1 133444444321 234569998888752
Q ss_pred ------------------------CeEEEEEEcCCcEEEE-eCCeEEEcCccccccc-----------------CCcc--
Q 010417 354 ------------------------QGLRAINLGDSGFVVV-RDGCTVFRSPVQQHDF-----------------NFTY-- 389 (511)
Q Consensus 354 ------------------------~~L~VANVGDSRayLi-RdG~li~lS~~q~~~~-----------------n~p~-- 389 (511)
++++++||||||+|++ |+|++.++|.+|.... +.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~~~rv~ 228 (364)
T 2isn_A 149 EHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRVD 228 (364)
T ss_dssp -----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESSSEEET
T ss_pred ccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCCCcccC
Confidence 3799999999999999 6899999999884310 1111
Q ss_pred ---ceec--CCCC------------CCCCcceEEEEecCCCCEEEEEccCCCCCCC--HHHHHHHHHHHH-hCCCCHHHH
Q 010417 390 ---QLEY--GSNS------------DLPSSGQVFTIPVAPGDVIIAGTDGLFDNLY--NNEITAVVVHAM-RAGLGPQVT 449 (511)
Q Consensus 390 ---qL~~--g~~~------------d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls--~eEI~~iV~~~l-~~g~~~q~a 449 (511)
.++. |... ....+|++..++++++|+||||||||||+++ ++++.+++...+ ....+++++
T Consensus 229 g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D~llL~SDGl~d~l~~~~~~v~~~~~~~~~~~~~~~~~~ 308 (364)
T 2isn_A 229 GVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSDLLLLACDGVYEPSGMDWAYVRDLTVAEMQRSKGDLEEV 308 (364)
T ss_dssp TTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTCEEEEECHHHHCSSSCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCCEEEEEcCCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHH
Confidence 1111 1110 1124689999999999999999999999976 899998876543 445689999
Q ss_pred HHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEEEEEEEecCC
Q 010417 450 AQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITVVVSYITNCE 500 (511)
Q Consensus 450 A~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITVIVV~i~~~~ 500 (511)
|+.|++.|++ +|+.||||||||++....
T Consensus 309 a~~Lv~~A~~-----------------------~g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 309 AARVMDYAYD-----------------------MNSQDNISVMLVAFHNQE 336 (364)
T ss_dssp HHHHHHHHHH-----------------------TTCCSCEEEEEEEECSSC
T ss_pred HHHHHHHHHh-----------------------cCCCCCEEEEEEEcCCCC
Confidence 9999999999 688999999999997654
No 16
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.97 E-value=8.9e-30 Score=272.84 Aligned_cols=225 Identities=22% Similarity=0.215 Sum_probs=150.0
Q ss_pred CCCCCCCCCCCceEEe-----cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHH-------HcC------------
Q 010417 265 PHPDKEETGGEDAHFI-----SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAI-------QEE------------ 320 (511)
Q Consensus 265 s~~Gk~R~~NEDa~~V-----~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l-------~~~------------ 320 (511)
++.|+.|..|||++.+ .+..+|||||||||+. ++++|++.+...+... .+.
T Consensus 43 s~~g~~R~~nED~~~v~~~~~~~~~lfgVfDGHGG~~-----aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~ 117 (467)
T 2pnq_A 43 SNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCA-----CSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLP 117 (467)
T ss_dssp EEEECCSSSCCEEEEEEEESSSSCEEEEEEEEESSSH-----HHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCC
T ss_pred eeccCCCCCCCCceeeeeccCCCcEEEEEECCCCCHH-----HHHHHHHHHHHHHHHhhcchhhhhhhhhhhhccccccc
Confidence 5567889999999977 2678999999999999 9999998876655321 100
Q ss_pred -------CC------------------------------CCCCHHHHHHHHHHccC-----------------------c
Q 010417 321 -------PD------------------------------GSIDPARVLEKAHSSTR-----------------------A 340 (511)
Q Consensus 321 -------~~------------------------------~~~~~~e~L~~A~~~~~-----------------------~ 340 (511)
+. ...++.+.|+++|.+++ .
T Consensus 118 ~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 197 (467)
T 2pnq_A 118 ILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVA 197 (467)
T ss_dssp CEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred cccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCC
Confidence 00 01145667776664321 2
Q ss_pred CCCceEEEEEEeCCeEEEEEEcCCcEEEEe---CC--eEEEcCccccccc---------------------CCc----cc
Q 010417 341 KGSSTACIIALTDQGLRAINLGDSGFVVVR---DG--CTVFRSPVQQHDF---------------------NFT----YQ 390 (511)
Q Consensus 341 ~GGSTavvalI~~~~L~VANVGDSRayLiR---dG--~li~lS~~q~~~~---------------------n~p----~q 390 (511)
..|||++++++.+++++|||+|||||||+| +| ++.++|.+|.... +.. ..
T Consensus 198 ~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~ 277 (467)
T 2pnq_A 198 FSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLM 277 (467)
T ss_dssp HSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBS
T ss_pred CCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccc
Confidence 357999999999999999999999999999 47 7889999884310 000 11
Q ss_pred ----eecCCC----------------------------------CCCCCcceEEEEecCCCC-EEEEEccCCCCCCCHHH
Q 010417 391 ----LEYGSN----------------------------------SDLPSSGQVFTIPVAPGD-VIIAGTDGLFDNLYNNE 431 (511)
Q Consensus 391 ----L~~g~~----------------------------------~d~p~~pdV~~i~L~~gD-~LVL~SDGLwD~Ls~eE 431 (511)
+|.... .....+|++..+++.++| |||||||||||+|+++|
T Consensus 278 vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~e 357 (467)
T 2pnq_A 278 PFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQD 357 (467)
T ss_dssp SSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred cchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccccCChHH
Confidence 111100 012357899999999998 78899999999999999
Q ss_pred HHHHHHHHHhCC--CCH------------------------------HHHHHHHHHHHHhhc----cccCCCCcchhhhh
Q 010417 432 ITAVVVHAMRAG--LGP------------------------------QVTAQKIAALARQRA----QDKDRQTPFSTAAQ 475 (511)
Q Consensus 432 I~~iV~~~l~~g--~~~------------------------------q~aA~~Lv~~A~~~a----~d~~~~tpf~~~a~ 475 (511)
++++|...+... .+| +++|..|++.|+... ++...-+ ..+
T Consensus 358 iv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~----~ll 433 (467)
T 2pnq_A 358 VVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLS----KML 433 (467)
T ss_dssp HHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHH----hhh
Confidence 999999876321 122 567899999998732 0100000 000
Q ss_pred hcccccCCCCcCCeEEEEEEEec
Q 010417 476 DAGFRYYGGKLDDITVVVSYITN 498 (511)
Q Consensus 476 ~~g~~~~~Gs~DNITVIVV~i~~ 498 (511)
.-.....+..+||||||||+|..
T Consensus 434 ~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 434 SLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp ---------CCSCEEEEEEEECH
T ss_pred cCCccccccCCCCcEEEEEEeCc
Confidence 00112235678999999999975
No 17
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.96 E-value=4.4e-30 Score=268.28 Aligned_cols=203 Identities=17% Similarity=0.201 Sum_probs=149.7
Q ss_pred cCCCCCCCCCC-----CceEEe-c------CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHH
Q 010417 264 LPHPDKEETGG-----EDAHFI-S------DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVL 331 (511)
Q Consensus 264 ~s~~Gk~R~~N-----EDa~~V-~------d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L 331 (511)
.+++|. |+.| ||++++ . +..+|+|||||||+. ++++|++.+...+. +.. ..+.+.|
T Consensus 18 ~s~~G~-R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~-----aa~~as~~l~~~l~---~~~---~~~~~al 85 (377)
T 3d8k_A 18 ATSRNR-RPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRH-----SAMWLAQNVMNYLN---DLR---DVNEEEI 85 (377)
T ss_dssp TTTCEE-EEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSH-----HHHHHHHHHHHHHT---TCS---SSSHHHH
T ss_pred EEccCC-CCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHH-----HHHHHHHHHHHHHH---Hhc---ccHHHHH
Confidence 677886 6665 556655 1 346999999999999 99999988776543 221 1235566
Q ss_pred HHHHHcc-------CcCCCceEEEEEEe---------------------------------------------------C
Q 010417 332 EKAHSST-------RAKGSSTACIIALT---------------------------------------------------D 353 (511)
Q Consensus 332 ~~A~~~~-------~~~GGSTavvalI~---------------------------------------------------~ 353 (511)
+++|.+. ...+|||++++++. +
T Consensus 86 ~~af~~~d~~l~~~~~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~~~~ 165 (377)
T 3d8k_A 86 TRQFERMDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAAKGI 165 (377)
T ss_dssp HHHHHHHHHHHHHHTCCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGTTCE
T ss_pred HHHHHHHHHHHHhcccCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeecccccccccCC
Confidence 6665543 23467999888774 1
Q ss_pred CeEEEEEEcCCcEEEEeCCeEEEcCccccccc-----------------CCcc------ceec--CCCC-----------
Q 010417 354 QGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF-----------------NFTY------QLEY--GSNS----------- 397 (511)
Q Consensus 354 ~~L~VANVGDSRayLiRdG~li~lS~~q~~~~-----------------n~p~------qL~~--g~~~----------- 397 (511)
+++++|||||||+|++|+|++.++|.+|.... +... .++. |...
T Consensus 166 ~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~~~~~~~~~ 245 (377)
T 3d8k_A 166 YTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKKGGQGKLQQ 245 (377)
T ss_dssp EEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSCC---CCSS
T ss_pred CeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhhccccccccc
Confidence 38999999999999999999999999884311 1111 1111 1110
Q ss_pred -CCCCcceEEEEecCCCCEEEEEccCCCCCCCHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHhhccccCCCCcchhhhh
Q 010417 398 -DLPSSGQVFTIPVAPGDVIIAGTDGLFDNLYNNEITAVVVHAMR-AGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQ 475 (511)
Q Consensus 398 -d~p~~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~-~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~ 475 (511)
....+|++..++++++|+||||||||||+|+++|+++.+...+. ...+++++|+.|+++|++
T Consensus 246 ~~v~~~Pdv~~~~l~~~D~llL~SDGl~d~ls~~e~v~~v~~~~~~~~~~~~~~a~~Lv~~A~~---------------- 309 (377)
T 3d8k_A 246 DLVSAVPDVTTFFAYPGDDIVAGTAGAFAHFRSHAAIAAAIALYPVSPETVLDAAKAMVVNAKR---------------- 309 (377)
T ss_dssp CSSBCCCEEEEEEECTTCEEEEECGGGGCSCSSHHHHHHHHTTSCCCGGGHHHHHHHHHHTTTT----------------
T ss_pred CccccCCcEEEEEcCCCCEEEEEECCcccCCCcHHHHHHHHHHhhccCCCHHHHHHHHHHHHHh----------------
Confidence 12247899999999999999999999999999999886654221 135789999999999998
Q ss_pred hcccccCCCCcCCeEEEEEEEecCCC
Q 010417 476 DAGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 476 ~~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
+|+.||||||||++.....
T Consensus 310 -------~g~~DNiTvivv~~~~~~~ 328 (377)
T 3d8k_A 310 -------RKVTKNISTFVRHLPESRT 328 (377)
T ss_dssp -------SSCCSCCCEEEEECCSSCC
T ss_pred -------cCCCCCEEEEEEEecCCcc
Confidence 7999999999999987654
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.96 E-value=2.8e-29 Score=240.91 Aligned_cols=177 Identities=16% Similarity=0.195 Sum_probs=128.9
Q ss_pred cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHcc--------C-cCCCceEEEEEE
Q 010417 281 SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEKAHSST--------R-AKGSSTACIIAL 351 (511)
Q Consensus 281 ~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~A~~~~--------~-~~GGSTavvalI 351 (511)
++..+|+|||||||+. +|++|++++...+....... .++.+.++.+.... . ...|||++++++
T Consensus 8 ~~~~l~~VaDG~GG~~-----~g~~AS~~~~~~l~~~~~~~---~~~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i 79 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMI-----RGDEAAQRALSASVGVLDAG---GSPLDAVLAAQAAVHRWASQGGILGRTGATMAVAAV 79 (211)
T ss_dssp TTEEEEEEEEECTTST-----THHHHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEE
T ss_pred CCccEEEEEeCCcCcH-----HHHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHhhccCCCCcchhheeeee
Confidence 5678999999999999 89999998887775443322 23455565554322 1 224599999999
Q ss_pred e--CCeEEEEEEcCCcEEEEeCCeEEEcCccccccc----------CCccc--eecCCCCCCCCcceE--EEEecCCCCE
Q 010417 352 T--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDF----------NFTYQ--LEYGSNSDLPSSGQV--FTIPVAPGDV 415 (511)
Q Consensus 352 ~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~----------n~p~q--L~~g~~~d~p~~pdV--~~i~L~~gD~ 415 (511)
. +++++++|+||||+|++|+|++.++|.+|.... ..|.+ +....+.....+|++ ..+++++||+
T Consensus 80 ~~~~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~~~~~~~~~~~ltralG~~~~~~~~~~~~~~~l~~gd~ 159 (211)
T 3rnr_A 80 NLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGRGPVPGPAGEMITSFIGIENLTEISTSEAPLPLEAGEG 159 (211)
T ss_dssp ETTTTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTSCCCCSHHHHCBSCCBTCSSCCCCEECSSCEECCTTCE
T ss_pred eeCCCEEEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCCChhhCCCccEEecccCCCCCcceeEecceecCCCCCE
Confidence 9 889999999999999999999999999985321 12222 221111222335788 7899999999
Q ss_pred EEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCC--CcCCeEEEE
Q 010417 416 IIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGG--KLDDITVVV 493 (511)
Q Consensus 416 LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~G--s~DNITVIV 493 (511)
||||||||||+++++|+.+++.+. .+ |+.|++.|++ +| +.|||||||
T Consensus 160 llL~SDGl~d~~~~~~i~~~l~~~----~~----a~~L~~~a~~-----------------------~g~~~~DNiTviv 208 (211)
T 3rnr_A 160 VLVVSDGVYRSLHEDRIAMALSRG----SD----ARGILQEVEA-----------------------QGRPYQDNATLAL 208 (211)
T ss_dssp EEEEEC-----CCTTEEEEEECTT----SC----HHHHHHHHHH-----------------------SCTTSCSSCEEEE
T ss_pred EEEEcCCCCCCcCHHHHHHHHhcC----Ch----HHHHHHHHHH-----------------------cCCCCCCceEEEE
Confidence 999999999999999999988643 22 8999999998 45 889999999
Q ss_pred EEE
Q 010417 494 SYI 496 (511)
Q Consensus 494 V~i 496 (511)
|++
T Consensus 209 v~L 211 (211)
T 3rnr_A 209 VIL 211 (211)
T ss_dssp EEC
T ss_pred EeC
Confidence 985
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.87 E-value=1.4e-21 Score=189.80 Aligned_cols=210 Identities=19% Similarity=0.196 Sum_probs=141.5
Q ss_pred CcceEEEEEEEecCCCCCCCCCCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCH
Q 010417 252 GKTLKLLSGACCLPHPDKEETGGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDP 327 (511)
Q Consensus 252 ~~~lrl~~gs~~~s~~Gk~R~~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~ 327 (511)
.+.+++.++.+.+++|+ +..++|.+.+ + +..+++|+||+|+.. ++.+++.++...+..+.... .++
T Consensus 3 ~~~~~i~~~~~~~~~p~--~~v~GD~y~~~~~~~~~~~~~vaDg~G~G~-----~aa~~s~~~~~~l~~~~~~~---~~~ 72 (242)
T 3t91_A 3 AMSYRVSTGAAHAAKGG--GLVSGDSYSMMELGARKYAAAISDGMGNGA-----RAHFESNETIKLLEKILESG---IDE 72 (242)
T ss_dssp CCCCEEEEEEEEECTTS--CSCCSCEEEEEEETTTEEEEEEECC----------CCSEEECHHHHHHHHHHHHT---CCH
T ss_pred cceEEEEEEeehhcCCc--cccCCcEEEEEEeCCCeEEEEEEeeCCCCH-----HHHHHHHHHHHHHHHHHHhC---CCH
Confidence 36788999999898887 7899999877 3 345699999999765 23333333333333332211 357
Q ss_pred HHHHHHHHHcc----CcCCCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccccCCccceecCCCCCCCC
Q 010417 328 ARVLEKAHSST----RAKGSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPS 401 (511)
Q Consensus 328 ~e~L~~A~~~~----~~~GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~p~ 401 (511)
.++++...... ....++|+++++++ +++++++|+||+++|++|+|++..++.. +.| + |... ..
T Consensus 73 ~~~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~-----~~~--l--G~~~--~~ 141 (242)
T 3t91_A 73 KIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQAS-----NLP--I--GIIN--EF 141 (242)
T ss_dssp HHHHHHHHHHHTTC----CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC--------------CCC--TT
T ss_pred HHHHHHHHHHHHhcCCCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCC-----Cce--e--EecC--CC
Confidence 77776655432 12234899998887 5689999999999999999988775432 111 2 2212 23
Q ss_pred cceEEEEecCCCCEEEEEccCCCCCCC-----HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhh
Q 010417 402 SGQVFTIPVAPGDVIIAGTDGLFDNLY-----NNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQD 476 (511)
Q Consensus 402 ~pdV~~i~L~~gD~LVL~SDGLwD~Ls-----~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~ 476 (511)
.++...+++++||.|+||||||||.++ ...+.+++... ...+++++++.|++.+.+..
T Consensus 142 ~~~~~~~~l~~GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~--~~~~~~~~~~~l~~~~~~~~--------------- 204 (242)
T 3t91_A 142 DVEVVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGL--KTNDPQEIADLLMEEVIRTR--------------- 204 (242)
T ss_dssp CEEEEEEECCTTCEEEEECHHHHTCSTTCSCHHHHHHHHHHTC--CCCCHHHHHHHHHHHHHHHT---------------
T ss_pred cceEEEEEeCCCCEEEEECCCcccCCCcccchHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHc---------------
Confidence 467889999999999999999999998 45556655431 24689999999999998821
Q ss_pred cccccCCCCcCCeEEEEEEEecCCCccc
Q 010417 477 AGFRYYGGKLDDITVVVSYITNCEDVCS 504 (511)
Q Consensus 477 ~g~~~~~Gs~DNITVIVV~i~~~~~~~~ 504 (511)
.+...||||++++++....+.+.
T Consensus 205 -----~~~~~DDiTvv~i~~~~~~~~~~ 227 (242)
T 3t91_A 205 -----SGQIEDDMTVVVVRIDHNTPKWA 227 (242)
T ss_dssp -----TSCCCSCEEEEEEEEEECCCCC-
T ss_pred -----CCCCCCceEEEEEEEecCCCcce
Confidence 01136999999999998776544
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.83 E-value=3.6e-19 Score=174.12 Aligned_cols=206 Identities=17% Similarity=0.148 Sum_probs=147.5
Q ss_pred CcceEEEEEEEecCCCCCCCCCCCceEEe---cCC-eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCH
Q 010417 252 GKTLKLLSGACCLPHPDKEETGGEDAHFI---SDK-QAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDP 327 (511)
Q Consensus 252 ~~~lrl~~gs~~~s~~Gk~R~~NEDa~~V---~d~-~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~ 327 (511)
.+++.+.++....+.|+ +..++|.+.+ ++. .+++|+||+|+.. ++.+++.++...+..+.... .++
T Consensus 6 ~m~~~~~~~~~~~~~~~--~~vgGD~y~~~~~~~~~~~~~vaD~~G~G~-----~aa~~s~~~~~~l~~~~~~~---~~~ 75 (242)
T 3pu9_A 6 PMPVTIELAVAKTHKFG--TRESGDTVELVERPGGGFSAVLVDGQGSGA-----GAKRLSLLVAGAAVRLLNEG---VRD 75 (242)
T ss_dssp -CCEEEEEEEEEECCTT--CSSCSEEEEEEECTTSEEEEEEEEESSSHH-----HHHHHHHHHHHHHHHHHHTT---CCH
T ss_pred cCCcEEEEEEEecccCc--cccCCceEEEEEeCCCEEEEEEEecCCCCH-----HHHHHHHHHHHHHHHHHHcC---CCH
Confidence 46778888887777776 7889999877 344 4699999999777 67777776666665554322 357
Q ss_pred HHHHHHHHHcc----CcCCCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccccCCccceecCCCCCCCC
Q 010417 328 ARVLEKAHSST----RAKGSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPS 401 (511)
Q Consensus 328 ~e~L~~A~~~~----~~~GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~p~ 401 (511)
.++++...... .....+|++++.++ .+.+.++|+||+++|++|+|++..++.++. | + |...+ .
T Consensus 76 ~~~l~~~n~~l~~~~~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~-----~--l--G~~~~--~ 144 (242)
T 3pu9_A 76 GAAARAAHDFLYAMRDGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGG-----R--I--GIYRH--T 144 (242)
T ss_dssp HHHHHHHHHHHHHHTTTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCC-----C--B--SSCTT--C
T ss_pred HHHHHHHHHHHHhccCCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCc-----c--c--cccCC--C
Confidence 77766654322 22234899988887 458999999999999999999877654321 1 2 22222 2
Q ss_pred cceEEEEecCCCCEEEEEccCCCCCCC-------HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhh
Q 010417 402 SGQVFTIPVAPGDVIIAGTDGLFDNLY-------NNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAA 474 (511)
Q Consensus 402 ~pdV~~i~L~~gD~LVL~SDGLwD~Ls-------~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a 474 (511)
.++...+++++||.|+||||||+|... .+++..++. ....+++++++.|++.+....
T Consensus 145 ~~~~~~~~l~~Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~---~~~~~~~~~~~~l~~~~~~~~------------- 208 (242)
T 3pu9_A 145 RPRVLEFPAEPGLTVILVSDGIIGAGGRRGQPLEFLATGGRVA---GPETPAQAIADELLEAALVAD------------- 208 (242)
T ss_dssp CCEEEEEECCTTCEEEEECHHHHTTTTTTTCCCCHHHHHHHHC---CTTCCHHHHHHHHHHHHHHHT-------------
T ss_pred CceEEEEEeCCCCEEEEECcCcccCCCCccccccHHHHHHHHh---ccCCCHHHHHHHHHHHHHHhc-------------
Confidence 367889999999999999999998764 366643321 134689999999999998821
Q ss_pred hhcccccCCCCcCCeEEEEEEEecCCC
Q 010417 475 QDAGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 475 ~~~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
.+...||||++++++.+.+.
T Consensus 209 -------~~~~~DDiTvlvv~~~~~~~ 228 (242)
T 3pu9_A 209 -------DGRAGDDMTVVVLRLRNVEE 228 (242)
T ss_dssp -------TTSCSSCEEEEEEEEEECCC
T ss_pred -------CCCCCCCeEEEEEEEecCCC
Confidence 01257999999999987653
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.78 E-value=5.5e-18 Score=160.44 Aligned_cols=185 Identities=16% Similarity=0.168 Sum_probs=134.4
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe---cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEK 333 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V---~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~ 333 (511)
+.+|+++.|+|+ +..++|.|.+ ++..+++|+||+|... .+.+++..+...+... ...+|.++|+.
T Consensus 4 ~~~~~~~~p~~~--~~v~GD~y~~~~~~~~~~~~v~Dv~GhG~-----~Aa~~s~~~~~~l~~~-----~~~~p~~il~~ 71 (193)
T 3zt9_A 4 LEVGIYTRAREG--EIACGDACLVKRVEGVIFLAVGDGIGHGP-----EAARAAEIAIASMESS-----MNTGLVNIFQL 71 (193)
T ss_dssp CCEEEEEECCTT--CSSCSEEEEEEEETTEEEEEEEEESSSHH-----HHHHHHHHHHHHHHHH-----TTSCHHHHHHH
T ss_pred cEEEEEEeccCC--CCCCCCeEEEEEeCCEEEEEEEeCCCCCH-----HHHHHHHHHHHHHHHc-----ccCCHHHHHHH
Confidence 457787788776 7899999987 5677899999999433 3333333333333332 13468888888
Q ss_pred HHHccCcCCCceEEEEEEe--CCeEEEEEEcCCcEEEEeCCeEEEcCcccccccCCccceecCCCCCCCCcceEEEEecC
Q 010417 334 AHSSTRAKGSSTACIIALT--DQGLRAINLGDSGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVFTIPVA 411 (511)
Q Consensus 334 A~~~~~~~GGSTavvalI~--~~~L~VANVGDSRayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~p~~pdV~~i~L~ 411 (511)
.........+.|++++.++ .+++.++|+|+++.|++|+++...+... +..++ . ..+..++...++++
T Consensus 72 ln~~l~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~-------~g~lG--~--~~~~~~~~~~~~l~ 140 (193)
T 3zt9_A 72 CHRELRGTRGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLAT-------PGILG--Y--NYPHQLLIAKGSYQ 140 (193)
T ss_dssp HHHHHTTSSCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCB-------CCBBT--T--BCCSSCCCEEEECC
T ss_pred HHHHHhccCceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCC-------CCcee--c--cCCccceeEEeccC
Confidence 7766555556888888888 4489999999999999999876543211 11122 1 11224567789999
Q ss_pred CCCEEEEEccCCCCCCCHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhhhhcccccCCCCcCCeEE
Q 010417 412 PGDVIIAGTDGLFDNLYNNEITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQDAGFRYYGGKLDDITV 491 (511)
Q Consensus 412 ~gD~LVL~SDGLwD~Ls~eEI~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~~g~~~~~Gs~DNITV 491 (511)
+||.|+||||||+|.+..+++.+++ ..+|+++|+.|++.+. +..||+||
T Consensus 141 ~gd~l~l~sDGl~e~~~~~~~~~~~------~~~~~~~a~~l~~~~~-------------------------~~~Dd~tv 189 (193)
T 3zt9_A 141 EGDLFLIHSDGIQEGAVPLALLANY------RLTAEELVRLIGEKYG-------------------------RRDDDVAV 189 (193)
T ss_dssp TTCEEEEECTTSCTTCSCGGGGGCT------TSCHHHHHHHHHHHHC-------------------------CTTSCEEE
T ss_pred CCCEEEEECCCCCCccChhhhhchh------cCCHHHHHHHHHHHhC-------------------------cCCCCeEE
Confidence 9999999999999999999887654 2589999999999873 24799999
Q ss_pred EEEE
Q 010417 492 VVSY 495 (511)
Q Consensus 492 IVV~ 495 (511)
+|++
T Consensus 190 lv~r 193 (193)
T 3zt9_A 190 IVAR 193 (193)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9985
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.71 E-value=2.8e-16 Score=153.69 Aligned_cols=194 Identities=18% Similarity=0.100 Sum_probs=122.4
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcC-----CCCCCCH
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEE-----PDGSIDP 327 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~-----~~~~~~~ 327 (511)
+.+...+.| . +..+.|.+-+ + +..+++|+||+|+.. ++.+++.++...+..+... .....++
T Consensus 38 ~~~~~~~~p--~--~~vgGD~yd~~~~~~~~~~~~vaD~~GhG~-----~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p 108 (255)
T 3f79_A 38 LEFSHRIIP--S--LYLSGDFVDYFRVDERRVAFYLADVSGHGA-----SSAFVTVLLKFMTTRLLYESRRNGTLPEFKP 108 (255)
T ss_dssp EEEEEEEEC--S--SSSCSEEEEEEEETTTEEEEEEEEESSCSH-----HHHHHHHHHHHHHHHHHHHHTTCCC----CH
T ss_pred EEEEEEEeE--h--hhcCceEEeEEEeCCCEEEEEEEEecCCCH-----HHHHHHHHHHHHHHHHHHhhccccccccCCH
Confidence 345555555 2 6788998844 3 456899999999655 5666666655555544221 1123467
Q ss_pred HHHHHHHHHcc---CcCCCceEEEEEEe--CCeEEEEEEcC-CcEEEEeCCeEEEcCcccccccCCccceecCCCCCCCC
Q 010417 328 ARVLEKAHSST---RAKGSSTACIIALT--DQGLRAINLGD-SGFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPS 401 (511)
Q Consensus 328 ~e~L~~A~~~~---~~~GGSTavvalI~--~~~L~VANVGD-SRayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~p~ 401 (511)
.++|+...... ....++|+++++++ .+.++++|+|| ++.|++++|++..++... .| + |...+ .
T Consensus 109 ~~~l~~ln~~l~~~~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~-----~~--l--G~~~~--~ 177 (255)
T 3f79_A 109 SEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRG-----LP--V--GLFDD--A 177 (255)
T ss_dssp HHHHHHHHHHHBTTBSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC--------------CCSSC--C
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCC-----ce--E--EEcCC--C
Confidence 77777665433 22234899999996 45899999999 568999999887765321 11 2 22222 2
Q ss_pred cceEEEEecCCCCEEEEEccCCCCCCCHHH-------HHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccCCCCcchhhh
Q 010417 402 SGQVFTIPVAPGDVIIAGTDGLFDNLYNNE-------ITAVVVHAMRAGLGPQVTAQKIAALARQRAQDKDRQTPFSTAA 474 (511)
Q Consensus 402 ~pdV~~i~L~~gD~LVL~SDGLwD~Ls~eE-------I~~iV~~~l~~g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a 474 (511)
..+...+++++||.|+||||||+|.++.++ +.+++.+. ..+++++++.|. .+..
T Consensus 178 ~~~~~~~~l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~---~~~~~~~~~~l~-~~~~--------------- 238 (255)
T 3f79_A 178 TYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA---GGTLDGLRQVFG-LANL--------------- 238 (255)
T ss_dssp CCCC---BCCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH---SCSSHHHHHHC---------------------
T ss_pred ceEEEEEEECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc---CCCHHHHHHHHH-hccC---------------
Confidence 356678899999999999999999998877 88887654 235677777776 3333
Q ss_pred hhcccccCCCCcCCeEEEEEEEe
Q 010417 475 QDAGFRYYGGKLDDITVVVSYIT 497 (511)
Q Consensus 475 ~~~g~~~~~Gs~DNITVIVV~i~ 497 (511)
++..|||||++++..
T Consensus 239 --------~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 239 --------AEMPDDIALLVLSRN 253 (255)
T ss_dssp --------CCSSSCEEEEEEEEC
T ss_pred --------CCCCCCEEEEEEEec
Confidence 577899999999864
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.35 E-value=6.4e-11 Score=123.92 Aligned_cols=206 Identities=19% Similarity=0.185 Sum_probs=126.9
Q ss_pred EEEEEEecCCCCCCCCCCCceEEe---cCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHH
Q 010417 257 LLSGACCLPHPDKEETGGEDAHFI---SDKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQEEPDGSIDPARVLEK 333 (511)
Q Consensus 257 l~~gs~~~s~~Gk~R~~NEDa~~V---~d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~~~~~~~~~~~e~L~~ 333 (511)
+.+...+.|... ....+.|.|-+ ++..+++|+|++|- |+.|+.+ ...+..++..+... ..++.++|+.
T Consensus 36 ~~~~~~y~P~~~-~~~vgGD~y~~~~~~~~~~~~v~Dv~Gh----Gv~AA~~-~~~~~~~l~~~~~~---~~~p~~il~~ 106 (399)
T 3ke6_A 36 ADIAAEYLVAAE-DTAAGGDWFDALALGDRLVLVVGDVVGH----GVEAAAV-MSQLRTALRMQISA---GYTVVEALEA 106 (399)
T ss_dssp EEEEEEEECSSS-SCSCCSEEEEEEECSSEEEEEEEECSSC----SHHHHHH-HHHHHHHHHHHHHT---TCCHHHHHHH
T ss_pred eEEEEEEEECCC-CCCCCCceEEEEEECCEEEEEEEEecCC----CHHHHHH-HHHHHHHHHHHHhc---CCCHHHHHHH
Confidence 456666666331 24678999866 56778999998882 2334433 33444444444332 2357776665
Q ss_pred HHH---ccCcCCCceEEEEEEe--CCeEEEEEEcCCcEEEEe-CCeEEEcCcccccccCCccceecCCCCCCCCcceEEE
Q 010417 334 AHS---STRAKGSSTACIIALT--DQGLRAINLGDSGFVVVR-DGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSSGQVFT 407 (511)
Q Consensus 334 A~~---~~~~~GGSTavvalI~--~~~L~VANVGDSRayLiR-dG~li~lS~~q~~~~n~p~qL~~g~~~d~p~~pdV~~ 407 (511)
... ......++|++++.++ .+.+.++|+|+++.++++ +|++..+.... +.| + |... ..+...
T Consensus 107 ln~~~~~~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~----~~p--l--G~~~----~~~~~~ 174 (399)
T 3ke6_A 107 VDRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTG----AGP--L--GSGT----GFPVRS 174 (399)
T ss_dssp HHHHGGGSTTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCS----CCC--T--TSSC----CCCCEE
T ss_pred HHHHHHhcCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCC----Ccc--e--ECCC----CceeEE
Confidence 433 2233345888888887 458999999999999999 67665543221 111 2 2111 235577
Q ss_pred EecCCCCEEEEEccCCCCCCCH------HHHHHHHHHHHhC-----CCCHHHHHHHHHHHHHhhccccCCCCcchhhhhh
Q 010417 408 IPVAPGDVIIAGTDGLFDNLYN------NEITAVVVHAMRA-----GLGPQVTAQKIAALARQRAQDKDRQTPFSTAAQD 476 (511)
Q Consensus 408 i~L~~gD~LVL~SDGLwD~Ls~------eEI~~iV~~~l~~-----g~~~q~aA~~Lv~~A~~~a~d~~~~tpf~~~a~~ 476 (511)
+++++||.|+|+||||.|.... +.+.+++.+.... ..++++.++.|++.+++....
T Consensus 175 ~~l~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------- 241 (399)
T 3ke6_A 175 EVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLR------------- 241 (399)
T ss_dssp EECCTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC----------CCHHHHHHHHHHHHHHH-------------
T ss_pred EEECCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhcc-------------
Confidence 8999999999999999998765 4555555543111 013445566666666552110
Q ss_pred cccccCCCCcCCeEEEEEEEecCCC
Q 010417 477 AGFRYYGGKLDDITVVVSYITNCED 501 (511)
Q Consensus 477 ~g~~~~~Gs~DNITVIVV~i~~~~~ 501 (511)
..+..|||||+++++.....
T Consensus 242 -----~~~~~DDitvl~vr~~~~~~ 261 (399)
T 3ke6_A 242 -----STGYNDDVTLLAMQRRAPTP 261 (399)
T ss_dssp -----TTCCSSCEEEEEEEECCCCC
T ss_pred -----CCCCCCceEEEEEEeeCCCc
Confidence 13567999999999987543
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.86 E-value=3.9e-08 Score=101.35 Aligned_cols=152 Identities=17% Similarity=0.106 Sum_probs=88.7
Q ss_pred EEEEEecCCCCCCCCCCCceEEe---c-CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHH-cCC----CCCCCHH
Q 010417 258 LSGACCLPHPDKEETGGEDAHFI---S-DKQAIGVADGVGGWANHGVNAGLYSRELMSNSVAAIQ-EEP----DGSIDPA 328 (511)
Q Consensus 258 ~~gs~~~s~~Gk~R~~NEDa~~V---~-d~~lfgVaDGhGG~a~sg~~Ag~~As~l~~~~l~~l~-~~~----~~~~~~~ 328 (511)
.+...+.| . ...+.|.+-+ + +...++|+|+.| +|+.|+..+..+ ...+..+. ... ....+|.
T Consensus 178 ~~~~~~~p--~--~~vgGD~yd~~~~~~~~~~~~i~Dv~G----hGv~aa~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~ 248 (394)
T 3eq2_A 178 EFSHRIIP--S--LYLSGDFVDYFRVDERRVAFYLADVSG----HGASSAFVTVLL-KFMTTRLLYESRRNGTLPEFKPS 248 (394)
T ss_dssp EEEEEEC---------CCCEEECCEETTTEEEEEEEEESS----CSTTTHHHHHHH-HHHHHHHHHHSCSSCSSSSCCHH
T ss_pred EEEEEecc--c--hhcCccEEeEEEeCCCcEEEEEEECCC----CChHHHHHHHHH-HHHHHHHHHhhhccCCcccCCHH
Confidence 45555554 2 5678998855 3 456899999888 455566655443 33333332 211 1134677
Q ss_pred HHHHHHHH---ccCcCCCceEEEEEEe--CCeEEEEEEcCC-cEEEEeCCeEEEcCcccccccCCccceecCCCCCCCCc
Q 010417 329 RVLEKAHS---STRAKGSSTACIIALT--DQGLRAINLGDS-GFVVVRDGCTVFRSPVQQHDFNFTYQLEYGSNSDLPSS 402 (511)
Q Consensus 329 e~L~~A~~---~~~~~GGSTavvalI~--~~~L~VANVGDS-RayLiRdG~li~lS~~q~~~~n~p~qL~~g~~~d~p~~ 402 (511)
++++.... +.......|++++.++ .+.+.++|.|.. ..++.++|++..+... +.| + |...+. .
T Consensus 249 ~~l~~ln~~l~~~~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~-----~~p--l--G~~~~~--~ 317 (394)
T 3eq2_A 249 EVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGR-----GLP--V--GLFDDA--T 317 (394)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC-------C--C--SCCCCC---
T ss_pred HHHHHHHHHHhccCcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCC-----Cce--e--EecCCC--c
Confidence 77765443 2232234888888888 347999999985 4778888887654311 111 2 222222 2
Q ss_pred ceEEEEecCCCCEEEEEccCCCCCCCH
Q 010417 403 GQVFTIPVAPGDVIIAGTDGLFDNLYN 429 (511)
Q Consensus 403 pdV~~i~L~~gD~LVL~SDGLwD~Ls~ 429 (511)
....++++++||.|+|+||||.|....
T Consensus 318 ~~~~~~~l~~gd~l~l~TDG~~e~~~~ 344 (394)
T 3eq2_A 318 YDDRVMELPPSFSLSLFSDGILDVLPG 344 (394)
T ss_dssp -CCEEEECCSSCEEEECSSCCCC----
T ss_pred eEEEEEEeCCCCEEEEECCCcccccCc
Confidence 355778999999999999999997544
No 25
>1rpb_A Tricyclic peptide RP 71955; HIV replication inhibitor, replication inhibitor; NMR {Actinomycete SP9440} SCOP: j.24.1.1 PDB: 1rpc_A
Probab=20.38 E-value=21 Score=22.39 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.3
Q ss_pred ceeeecchhhc
Q 010417 98 PSFQVCGYHID 108 (511)
Q Consensus 98 ~~~~~~~~~~~ 108 (511)
--|+-|||+|-
T Consensus 8 n~fagcgyaiv 18 (26)
T 1rpb_A 8 NDFAGCGYAVV 18 (26)
T ss_dssp CSSSSSCBBSS
T ss_pred cCcCCCceEEE
Confidence 35788999874
Done!