Query 010418
Match_columns 511
No_of_seqs 203 out of 516
Neff 5.2
Searched_HMMs 13730
Date Mon Mar 25 06:22:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010418.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/010418hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qmya_ d.3.1.2 (A:) FMDV lead 14.9 29 0.0021 29.2 1.7 20 366-385 23-42 (156)
2 d1cvua1 a.93.1.2 (A:74-583) Pr 11.7 55 0.004 32.6 3.0 22 372-393 458-479 (511)
3 d1q4ga1 a.93.1.2 (A:74-584) Pr 7.5 1E+02 0.0073 30.5 3.0 21 372-392 457-477 (511)
4 d2fnaa1 a.4.5.11 (A:284-356) H 6.0 1.2E+02 0.009 22.4 2.1 17 130-146 40-56 (73)
5 d1wpga4 f.33.1.1 (A:1-124,A:24 5.2 6.5E+02 0.048 23.3 7.7 20 425-444 410-429 (472)
6 d1p7ba2 f.14.1.1 (A:36-151) In 3.9 7.2E+02 0.052 18.2 5.7 28 270-297 60-89 (116)
7 d1gwya_ b.97.1.1 (A:) Sticholy 3.8 1.2E+02 0.0084 26.1 0.5 11 379-389 107-117 (175)
8 d1iaza_ b.97.1.1 (A:) Equinato 3.7 1.2E+02 0.0087 26.1 0.4 12 379-390 105-116 (175)
9 d1jxca_ g.3.7.5 (A:) Trypsin/c 3.4 81 0.0059 23.0 -0.8 9 280-288 28-36 (68)
10 d3c7bb3 d.134.1.1 (B:123-196,B 3.3 1.5E+02 0.011 24.6 0.9 14 379-392 164-177 (179)
No 1
>d1qmya_ d.3.1.2 (A:) FMDV leader protease {Foot-and-mouth disease virus [TaxId: 12110]}
Probab=14.93 E-value=29 Score=29.19 Aligned_cols=20 Identities=30% Similarity=0.763 Sum_probs=18.2
Q ss_pred HHHHHHHHHHhccCcccccc
Q 010418 366 LWLNILAELLRFGDREFYKD 385 (511)
Q Consensus 366 ~~LN~~AEl~rFgDR~FY~D 385 (511)
||||.+-.|+|.-|-.|++.
T Consensus 23 cWLN~ilQLfryv~epfFd~ 42 (156)
T d1qmya_ 23 AWLNAILQLFRYVEEPFFDW 42 (156)
T ss_dssp HHHHHHHHHHHHHTCCTTHH
T ss_pred hHHHHHHHHHHHcCccchhh
Confidence 89999999999999999843
No 2
>d1cvua1 a.93.1.2 (A:74-583) Prostaglandin H2 synthase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.69 E-value=55 Score=32.57 Aligned_cols=22 Identities=14% Similarity=0.234 Sum_probs=18.5
Q ss_pred HHHHhccCccccccccccccHH
Q 010418 372 AELLRFGDREFYKDWWNAKTVE 393 (511)
Q Consensus 372 AEl~rFgDR~FY~DWWNsts~~ 393 (511)
+.=++.|||-||+++|+..++.
T Consensus 458 f~r~r~gDRf~~e~~~~p~~ft 479 (511)
T d1cvua1 458 SLKGLMGNPICSPQYWKPSTFG 479 (511)
T ss_dssp HHHHHHTSGGGSTTTSSGGGGT
T ss_pred HHHHHhcCCccccCCCCCCCcC
Confidence 3447899999999999988875
No 3
>d1q4ga1 a.93.1.2 (A:74-584) Prostaglandin H2 synthase {Sheep (Ovis aries) [TaxId: 9940]}
Probab=7.50 E-value=1e+02 Score=30.52 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=17.5
Q ss_pred HHHHhccCccccccccccccH
Q 010418 372 AELLRFGDREFYKDWWNAKTV 392 (511)
Q Consensus 372 AEl~rFgDR~FY~DWWNsts~ 392 (511)
+.=++.|||-||+++|+..++
T Consensus 457 f~r~~~gDRf~~e~~~~~~~f 477 (511)
T d1q4ga1 457 SLKGLLGNPICSPEYWKASTF 477 (511)
T ss_dssp HHHHHHTSGGGSTTTCSGGGG
T ss_pred HHHHHhcCCccccCcCCCCCC
Confidence 344688999999999998776
No 4
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=6.04 E-value=1.2e+02 Score=22.37 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=13.6
Q ss_pred hHHHHHHHHHhhccccc
Q 010418 130 NSRLIIENLMKYGWLIK 146 (511)
Q Consensus 130 n~RlileN~~KyG~LI~ 146 (511)
.+.-+++|++|||++..
T Consensus 40 ~ls~lL~nL~k~~~iek 56 (73)
T d2fnaa1 40 EIYNYLTQLTKHSWIIK 56 (73)
T ss_dssp HHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHHHHHcCceee
Confidence 34568999999999864
No 5
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=5.18 E-value=6.5e+02 Score=23.26 Aligned_cols=20 Identities=30% Similarity=0.223 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 010418 425 ALLIAFTVSAIFHELCIAVP 444 (511)
Q Consensus 425 A~l~vF~vSA~~HE~ii~v~ 444 (511)
..+.+++++.+++=.++++|
T Consensus 410 ~l~~av~i~~~l~~~i~yiP 429 (472)
T d1wpga4 410 WLLGSICLSMSLHFLILYVD 429 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 33444444444444444333
No 6
>d1p7ba2 f.14.1.1 (A:36-151) Inward rectifier potassium channel Kirbac1.1 {Burkholderia pseudomallei [TaxId: 28450]}
Probab=3.93 E-value=7.2e+02 Score=18.23 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=21.2
Q ss_pred cchhhhhhhhh--ccceeeeccCCCCCccc
Q 010418 270 VSFKSLVYFMV--APTLCYQTSYPRTASVR 297 (511)
Q Consensus 270 ~tl~n~~yFl~--aPTL~Yq~~YPRT~~IR 297 (511)
.++-+-+||-+ .-|.=|.|-+|.|+.-|
T Consensus 60 ~~~~~a~yfs~~T~tTvGYGDi~P~t~~~~ 89 (116)
T d1p7ba2 60 PGFVGAFFFSVETLATVGYGDMHPQTVYAH 89 (116)
T ss_dssp SSTHHHHHHHTTTTTTCCCSCCCCCSHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccccCCcHHH
Confidence 35778888876 67888999999876433
No 7
>d1gwya_ b.97.1.1 (A:) Sticholysin II {Carribean sea anemone (Stoichactis helianthus) [TaxId: 6123]}
Probab=3.81 E-value=1.2e+02 Score=26.11 Aligned_cols=11 Identities=36% Similarity=1.458 Sum_probs=7.2
Q ss_pred Ccccccccccc
Q 010418 379 DREFYKDWWNA 389 (511)
Q Consensus 379 DR~FY~DWWNs 389 (511)
|=.||+.|||.
T Consensus 107 DYNlYsNW~aV 117 (175)
T d1gwya_ 107 DYNWYSNWWDV 117 (175)
T ss_dssp CCSSCCCEEEE
T ss_pred chhhhhhheee
Confidence 55677777764
No 8
>d1iaza_ b.97.1.1 (A:) Equinatoxin II (eqtII, tenebrosin C) {European sea anemone (Actinia equina) [TaxId: 6106]}
Probab=3.68 E-value=1.2e+02 Score=26.07 Aligned_cols=12 Identities=42% Similarity=1.456 Sum_probs=8.5
Q ss_pred Cccccccccccc
Q 010418 379 DREFYKDWWNAK 390 (511)
Q Consensus 379 DR~FY~DWWNst 390 (511)
|=.||+.|||..
T Consensus 105 DYNlYsNW~~V~ 116 (175)
T d1iaza_ 105 DYNWYSNWWNVR 116 (175)
T ss_dssp CTTTCCCEEEEE
T ss_pred chhhhhhheeee
Confidence 567788888753
No 9
>d1jxca_ g.3.7.5 (A:) Trypsin/chymotrypsin inhibitor ATT {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=3.40 E-value=81 Score=22.95 Aligned_cols=9 Identities=44% Similarity=1.213 Sum_probs=7.2
Q ss_pred hccceeeec
Q 010418 280 VAPTLCYQT 288 (511)
Q Consensus 280 ~aPTL~Yq~ 288 (511)
+.||+|||-
T Consensus 28 ifPt~Cy~n 36 (68)
T d1jxca_ 28 IFPTICYTR 36 (68)
T ss_dssp CCCCHHHHH
T ss_pred cchHHHHHH
Confidence 479999974
No 10
>d3c7bb3 d.134.1.1 (B:123-196,B:262-366) Dissimilatory sulfite reductase subunit beta, DsrB {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=3.35 E-value=1.5e+02 Score=24.64 Aligned_cols=14 Identities=14% Similarity=0.406 Sum_probs=10.6
Q ss_pred CccccccccccccH
Q 010418 379 DREFYKDWWNAKTV 392 (511)
Q Consensus 379 DR~FY~DWWNsts~ 392 (511)
|..||.|||.+..+
T Consensus 164 ~p~~y~d~~~~~~~ 177 (179)
T d3c7bb3 164 TPYFYSEFRASTQF 177 (179)
T ss_dssp SBGGGGGBCCSSCC
T ss_pred CCcEeecccccccc
Confidence 35899999887654
Done!