BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010419
(511 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1
SV=1
Length = 641
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/454 (60%), Positives = 328/454 (72%), Gaps = 14/454 (3%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPT-----APSGKKDSTIVDGLPMSGISDA 415
E P + K PLSPY SYEDLKPPTSP P +P+ K+ + +
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422
Query: 416 QTSTSGVKTGITETVSAPEELSKARPLSPYFAFK 449
STS V + V E K RPLSPY ++
Sbjct: 423 PDSTSNVPVVEVKQV----EEKKERPLSPYARYE 452
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 20/94 (21%)
Query: 374 PLSPYTSYEDLKPPTSPTPTAPSGKKDSTIVDG--LPMSGISDAQTSTSG---------- 421
PLSPY Y DLKPPTSPTP + K+ +++ D LP G +D + G
Sbjct: 532 PLSPYAIYADLKPPTSPTPASTGPKEAASVEDNSELP-GGNNDVLKTVDGNLNTIPPSTP 590
Query: 422 -----VKTGITETVSAPEELS--KARPLSPYFAF 448
V + I ++++ + + K RPLSPY +
Sbjct: 591 EAVPVVSSAIDTSLASGDNTAQPKPRPLSPYTMY 624
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 374 PLSPYTSYEDLKPPTSPTPT 393
PLSPYT Y D+KPPTSP P+
Sbjct: 617 PLSPYTMYADMKPPTSPLPS 636
>sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2
Length = 534
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 279/469 (59%), Positives = 333/469 (71%), Gaps = 35/469 (7%)
Query: 1 MEICSLQSQTLSTIPSPLSRNG---------LIVKSFGSCQILKFPSSKKFSHPR----K 47
ME+ SL S + IPS L+R L + + +++P + ++ R
Sbjct: 3 MEVFSLTS---TAIPSTLTRRDTAADKPSPHLNLSKY--SHFMRYPLTTTLTNNRIRSSS 57
Query: 48 LKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRV 107
+AQASG+ S P K DSKDDNL FVAGATGKVGSRTVREL+KLGF+V
Sbjct: 58 SSSSSIRAQASGSTK--SSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKV 115
Query: 108 RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVV 167
RAGVR+ Q+A LVQSVKQ+KLDG A+ G + VE LE+VECDLEK QI ALGNAS V
Sbjct: 116 RAGVRNAQKAGALVQSVKQLKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTV 173
Query: 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNL 227
IC IGASEKE+FDITGP RID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNL
Sbjct: 174 ICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNL 233
Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 287
FWGVL+WKRKAEEAL+ASG+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQ
Sbjct: 234 FWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQ 293
Query: 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA 347
VAEL+A MAKN LSYCK+VEVIAETTAPLTP E+LL +IPSQR +K+D A
Sbjct: 294 VAELMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTAT 353
Query: 348 ------SKSMISEESS-APITEEPVQTKAKVTDPLSPYTSYEDLKPPTSPTPTAPSGKKD 400
S ++++E S AP E + AK PLSPYT+Y+DLKPP+SP+PT PS KK
Sbjct: 354 VSNTGPSANVVAEVPSIAPQKETASKPVAKTEQPLSPYTAYDDLKPPSSPSPTKPSEKKQ 413
Query: 401 STIVDGLPMSGISDAQTSTSGVKTGITETVSAPEELSKAR-PLSPYFAF 448
I D +P SD +S + GI++T S+ SK + LSPY A+
Sbjct: 414 INISDAVPTPISSDTPSSIQEID-GISQTTSS----SKGKESLSPYAAY 457
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/20 (75%), Positives = 17/20 (85%)
Query: 374 PLSPYTSYEDLKPPTSPTPT 393
PLSPY YEDLKPP SP+P+
Sbjct: 511 PLSPYAMYEDLKPPASPSPS 530
>sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis
thaliana GN=At2g34460 PE=1 SV=1
Length = 280
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 28/253 (11%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FVAGATG+ G R V +LL GF V+AGVR V++A+ + +++ +G P ++
Sbjct: 50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E++ D + VIC G + FDI P+++D T NLVDA
Sbjct: 108 AEVIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQG 152
Query: 204 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V F++VSS+ N PA + LNLF L+ K +AE+ + SG+ YTIVRPGG+
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGL 212
Query: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317
+ T N+ + EDTL+ G +S VAE +A A + S KVVE++A AP
Sbjct: 213 KNDP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPK 267
Query: 318 TPMEELLAKIPSQ 330
++L A + Q
Sbjct: 268 RSYKDLFASVKGQ 280
>sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana
GN=At5g02240 PE=1 SV=1
Length = 253
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
V GA+G+ G + V + LK G F + VRS Q E + D + N
Sbjct: 8 LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66
Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
Q ++ L ++ + K + +P G I G P ++D+ KN +
Sbjct: 67 FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117
Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
DAA +A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176
Query: 257 MERPTDAYKETHNITLSQEDTLFG--------GQVSNLQVAELLACMAKNRSLSYCKVVE 308
+ +E + + ++D L V+ + + LL AKN++ E
Sbjct: 177 LLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 233
Query: 309 VIAETTAPLTPMEELLAKIPSQ 330
T+ P + L +++ S+
Sbjct: 234 ---GTSTPTKDFKALFSQVTSR 252
>sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis
thaliana GN=At2g37660 PE=1 SV=2
Length = 325
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 52/263 (19%)
Query: 43 SHPRKLKLPDFKAQASGTINIC--------SEAVGATPTKADSKDDNLAFVAGATGKVGS 94
S PR L F++ S + +IC + V T + A + + V GA G+ G
Sbjct: 32 SVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAGGRTGQ 90
Query: 95 RTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
++L + F R VR+ + E K++GE E+ D+
Sbjct: 91 IVYKKLKERSEQFVARGLVRTKESKE---------KINGED-----------EVFIGDIR 130
Query: 153 KRVQIEPALGNASVVICCIGA-------------SEKEVFDITGPY--RIDFQATKNLVD 197
I PA+ ++ A E F G Y ++D+ KN +D
Sbjct: 131 DTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
AA A V ++V S+G P +I N +L+WKRKAE+ L SG+PYTI+R GG
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGG 248
Query: 257 MERPTDAYKETHNITLSQEDTLF 279
++ +E + + ++D L
Sbjct: 249 LQDKDGGIRE---LLVGKDDELL 268
>sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3
SV=1
Length = 321
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG +G + VR L G++VR VR++++A L + ++ + G+L+ QP +
Sbjct: 4 LVIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFLKEWGAKL-IWGDLS----QPESL 58
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
L PAL V+I S D G Y++D + K L+DAA K
Sbjct: 59 L--------------PALTGIRVII---DTSTSRPTDPAGVYQVDLKGKKALIDAAKAMK 101
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
+ FI S L + K+ ++ + K EE L SGL YTI + G
Sbjct: 102 IEKFIFFSILNSEKYS-QVPLMRI-------KTVTEELLKESGLNYTIFKLCGF 147
>sp|Q9UT59|YKJ7_SCHPO Putative uncharacterized oxidoreductase C513.07
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC513.07 PE=3 SV=1
Length = 336
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122
L V G TG +G+ +LL+ G+RVR VRS+++A+ L++
Sbjct: 5 LVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKADELIR 45
>sp|P73212|DFRA_SYNY3 Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=dfrA PE=3 SV=1
Length = 343
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FV G TG VG+ VR LL+ G++VRA VR+ R +NL + + +D +
Sbjct: 14 FVTGGTGFVGANLVRHLLEQGYQVRALVRASSRPDNL----QNLPIDWVVG--------- 60
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+L + DL +++Q L + + + ++E YR + T+N++ A A
Sbjct: 61 -DLNDGDLHQQMQGCQGLFHVAAHY-SLWQKDREAL-----YRSNVLGTRNILACAQKAG 113
Query: 204 VNHFIMVSSL 213
+ + SS+
Sbjct: 114 IERTVYTSSV 123
>sp|P51238|YCF39_PORPU Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3
SV=1
Length = 319
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG +G + VR L G+ V+ VR+++++ L K G
Sbjct: 4 LVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFL-------KEWGA----------- 45
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
ELV DL+ E L + V I AS D +ID L++AA AK
Sbjct: 46 -ELVYGDLKLP---ESILQSFCGVTAVIDASTSRPSDPYNTEQIDLDGKIALIEAAKAAK 101
Query: 204 VNHFIMVSSLGTNKFGFPAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V FI S L ++ +P ++NL K + L S + YT+ GG
Sbjct: 102 VQRFIFFSILNADQ--YPKVPLMNL-------KSQVVNYLQKSSISYTVFSLGGF 147
>sp|Q1XDP9|YCF39_PORYE Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3
SV=1
Length = 319
Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG +G + VR L G+ V+ VR+++++ L +
Sbjct: 4 LVIGATGTLGRQIVRRALDEGYNVKCMVRNLRKSAFLKEWGA------------------ 45
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
EL+ DL+ E L + V I AS + D +ID L++AA AK
Sbjct: 46 -ELIYGDLKLP---ESILQSFCGVTAIIDASTSRLPDPYNAEKIDLDGKIALIEAAKAAK 101
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V FI S L + K+ ++NL K + + L S + Y + GG
Sbjct: 102 VERFIFFSILNSEKYP-DVPLMNL-------KSQVVDFLQKSNVKYIVFSLGGF 147
>sp|P83775|GRP2_CANAL Putative NADPH-dependent methylglyoxal reductase GRP2 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=GRP2 PE=1
SV=2
Length = 341
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGE 132
FV+GA+G + V++L++ G++V VRS ++ ++L +++K KL E
Sbjct: 8 FVSGASGFIAQTLVKQLIEKGYKVVGTVRSNEKGDSLKENLKAAKLQSE 56
>sp|O07609|YHFK_BACSU Uncharacterized sugar epimerase YhfK OS=Bacillus subtilis (strain
168) GN=yhfK PE=2 SV=1
Length = 214
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 24/175 (13%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
F+ GA G++G R V +R++ R E S++ + LAN P E
Sbjct: 4 FLIGANGQIGQRLVSLFQD---NPDHSIRAMVRKEEQKASLEAAGAEAVLANLEGSPEE- 59
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
I A +I G+ +D T +D ++AA IA
Sbjct: 60 -------------IAAAAKGCDAIIFTAGSGGSTGYDKT--LLVDLDGAAKAIEAAAIAG 104
Query: 204 VNHFIMVSSL-GTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
+ FIMVS+L N+ + A+ + + K A++ L ASGL YTI+RPGG+
Sbjct: 105 IKRFIMVSALQAHNRENWNEALKPYY----VAKHYADKILEASGLTYTIIRPGGL 155
>sp|Q8K301|DDX52_MOUSE Probable ATP-dependent RNA helicase DDX52 OS=Mus musculus GN=Ddx52
PE=2 SV=2
Length = 598
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 62 NICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAEN 119
N+ S ++GA + ++ + L FV TGK+ +REL+K GF+ V V+S++RA+
Sbjct: 371 NVVSVSIGARNSAVETVEQELLFVGSETGKL--LAMRELVKKGFKPPVLVFVQSIERAKE 428
Query: 120 LVQSV 124
L +
Sbjct: 429 LFHEL 433
>sp|Q8KU07|AZOB_XENAZ NAD(P)H azoreductase OS=Xenophilus azovorans GN=azoB PE=1 SV=2
Length = 286
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 38/174 (21%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
+ V G TG +GS VR L + +A VR +A EL +G+Q
Sbjct: 1 MILVVGGTGTIGSEVVRLLQEAKLPFKALVRDAAKAR-------------ELNARGVQ-- 45
Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 201
DL + + ALG +VF +T Q L+ AA
Sbjct: 46 ----TAAGDLREPRTLPAALGGVD-----------KVFVVTPLVPDQVQMRAALITAAKT 90
Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
A V HF+M + +G P I W + ++ + SG+ +T V+PG
Sbjct: 91 AGVKHFVMSTGIGAAP-DSPVQIGR-------WLGENQQQVQESGMAWTFVQPG 136
>sp|Q99PT0|DDX52_RAT Probable ATP-dependent RNA helicase DDX52 OS=Rattus norvegicus
GN=Ddx52 PE=2 SV=1
Length = 598
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 62 NICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAEN 119
NI S ++GA + ++ + L FV TGK+ +REL+K GF V V+S++RA+
Sbjct: 371 NIVSVSIGARNSAVETVEQELLFVGSETGKL--LAMRELVKKGFNPPVLVFVQSIERAKE 428
Query: 120 LVQSV 124
L +
Sbjct: 429 LFHEL 433
>sp|Q6BLA6|FMP52_DEBHA Protein FMP52, mitochondrial OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=FMP52 PE=3 SV=1
Length = 226
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
AF+ G+TG VG+ +LLK V + V +V + +DG +G+
Sbjct: 3 AFIIGSTGLVGA----QLLK--------VAAESNKFETVHTVSRRPVDGRDKVQGV---- 46
Query: 143 MLELVECDLEKRVQI--EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
VE D K ++ E + G G + + + +ID+ AA
Sbjct: 47 ----VETDTAKWPEVIRENSKG-VRTFFSAFGTTRADAGGVENFKKIDYGINYECAKAAK 101
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYT-IVRPGGM 257
A + F++VSSLG N+ LF+ L K K E +IA P T I+RPG +
Sbjct: 102 EAGIETFVLVSSLGANESSM------LFY--LKSKGKLENDIIALEFPRTIIIRPGAL 151
>sp|Q04304|YMY0_YEAST UPF0659 protein YMR090W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YMR090W PE=1 SV=1
Length = 227
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215
+I A+ V+ GA K + I + +D +V+A A + F++VS+L
Sbjct: 65 EITDAIKAYDAVVFSAGAGGKGMERI---FTVDLDGCIKVVEACEKAGIKRFVVVSALKA 121
Query: 216 NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME--------RPTDAYKE- 266
F I L + KR A+ + S L YTI++PG +E +P D +E
Sbjct: 122 EDRDFWYNIKGL-REYYIAKRSADREVRNSNLDYTILQPGSLELNKGTGLLQPLDKLEEK 180
Query: 267 -THNITLSQEDT 277
+ N ++++ED
Sbjct: 181 ASVNYSINREDV 192
>sp|Q1E2F1|MDM12_COCIM Mitochondrial distribution and morphology protein 12
OS=Coccidioides immitis (strain RS) GN=MDM12 PE=3 SV=1
Length = 446
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 21/95 (22%)
Query: 331 RAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPPTSP 390
R EP + P K DP AS+ P+++ DPL+PY P +
Sbjct: 123 RIEPHDVPIPSKEDPLASR--------------PIRSPMSFGDPLNPYFF------PRAG 162
Query: 391 TPTAPSGKKDSTIVDGLPMSGISDAQTSTSGVKTG 425
TP P G + +P+ GIS QT S V G
Sbjct: 163 TPGIPGGTSNLGYY-YMPLGGISGTQTPLSSVPRG 196
>sp|Q9Y2R4|DDX52_HUMAN Probable ATP-dependent RNA helicase DDX52 OS=Homo sapiens GN=DDX52
PE=1 SV=3
Length = 599
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 62 NICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAEN 119
N+ S ++GA + ++ + L FV TGK+ + +REL+K GF V V+S++RA+
Sbjct: 370 NVISVSIGARNSAVETVEQELLFVGSETGKLLA--MRELVKKGFNPPVLVFVQSIERAKE 427
Query: 120 LVQSV 124
L +
Sbjct: 428 LFHEL 432
>sp|P53183|YGD9_YEAST Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YGL039W PE=1
SV=1
Length = 348
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK 125
+ FV+GATG + V +LLK G++V RS ++ + L++ K
Sbjct: 7 VVFVSGATGFIALHVVDDLLKTGYKVIGSGRSQEKNDGLLKKFK 50
>sp|O31512|YESF_BACSU Uncharacterized oxidoreductase YesF OS=Bacillus subtilis (strain
168) GN=yesF PE=3 SV=1
Length = 286
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112
N + G TG VGSR L+KLG+RVR R
Sbjct: 5 NPILITGGTGTVGSRIASRLIKLGYRVRIASR 36
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRV-------RAGVRSVQRAENLVQSVKQMKLD---GEL 133
V G G +G+ TV +LLK GF+V + + +V R LV KLD G+L
Sbjct: 10 LVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNLGDL 69
Query: 134 ANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATK 193
NKG D+EK + +A + + A + V + + + T
Sbjct: 70 RNKG------------DIEKLFSKQRF--DAVIHFAGLKAVGESVENPRRYFDNNLVGTI 115
Query: 194 NLVDAATIAKVNHFIMVSSLGTNKFGFPAAI 224
NL + T+AK N +MV S +G P I
Sbjct: 116 NLYE--TMAKYNCKMMVFSSSATVYGQPEKI 144
>sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9,
mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2
SV=2
Length = 402
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
+A V GATG +G V++L K+G +V R + S + +KL G+L Q V
Sbjct: 70 VATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSE------DSPRHLKLMGDLG----QVV 119
Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 201
M + D I+ + A+VVI IG E E + + A K + A
Sbjct: 120 PM----KFDPRDEDSIKAVMAKANVVINLIG-REYETRNFSFEDANHHIAEKLALVAKEH 174
Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
+ +I VS LG + P+ +L K AEEA++ + TI+RP M
Sbjct: 175 GGIMRYIQVSCLGAS-VSSPSRMLRA-------KAAAEEAVLNALPEATIMRPATM 222
>sp|Q56623|GALE_VIBCL UDP-glucose 4-epimerase OS=Vibrio cholerae GN=galE PE=3 SV=1
Length = 328
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Query: 84 FVAGATGKVGSRTVREL-LKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ G+TG VG+ V+ L LK + V++ VR A N K DG L G
Sbjct: 13 LLTGSTGFVGTNLVKSLTLKSDYIVKSAVR---HAVN--------KDDGLLFEVG----- 56
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGAS----EKEVFDITGPYRIDFQATKNLVDA 198
D+ E L N +VV+ C + +KE +T ++ T NL
Sbjct: 57 -------DINASTDFELPLKNTTVVVHCAARAHVMDDKEAEPLTLYREVNTAGTVNLAKQ 109
Query: 199 ATIAKVNHFIMVSSLGTNKFG 219
A + V FI +SS+ N G
Sbjct: 110 AIDSGVKRFIFISSIKVNGEG 130
>sp|Q9ERI6|RDH14_MOUSE Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1
Length = 334
Score = 33.1 bits (74), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 15/100 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM----------KLDGEL 133
+ GA +G T ELL+LG RV G R RAE ++Q DG+L
Sbjct: 48 LITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRQELCQAGGAGPDGTDGQL 107
Query: 134 ANKGIQPVEMLELVECDLEKRVQIEPAL----GNASVVIC 169
K + + L V ++ +Q EP L NA V C
Sbjct: 108 VVKELD-LASLRSVRAFCQELLQEEPRLDVLINNAGVFHC 146
>sp|Q6CQW6|FMP52_KLULA Protein FMP52, mitochondrial OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=FMP52 PE=3 SV=1
Length = 224
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
Query: 163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF---IMVSSLGTNKFG 219
+A+V++ + + Y+ID V+ A +AK + ++VSSLG N+
Sbjct: 64 DATVLLTGLATTRAAAGGFENQYKIDHDMN---VELAKVAKAKGYKVCVLVSSLGANE-- 118
Query: 220 FPAAILNLFWGVLLWKRKAEEALIASGLPYTIV-RPGGM 257
N F L K + E +IA TI+ RPGG+
Sbjct: 119 ------NSFLPYLKLKGETERDIIALDFDKTIILRPGGL 151
>sp|B2HIL7|MSL7_MYCMM Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
GN=pks15/1 PE=1 SV=1
Length = 2104
Score = 32.7 bits (73), Expect = 7.1, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 21/153 (13%)
Query: 75 ADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELA 134
AD D + GATG VG+ R +L + VR V + +R + + + E A
Sbjct: 1712 ADGLADATVLITGATGAVGAVLARHMLD-AYGVRHLVLASRRGDRAEGAAELAAELSE-A 1769
Query: 135 NKGIQPVEMLELVECDLEKRVQIEPALGNAS-------VVICCIGASEKEVFDITGPYRI 187
+Q +V CD+ R +E L S VI G + V P RI
Sbjct: 1770 GANVQ------VVACDVADRDAVEAMLARLSGEYPPVRGVIHAAGVLDDAVISSLTPERI 1823
Query: 188 D------FQATKNLVDAATIAKVNHFIMVSSLG 214
D A NL +A ++ F++ SS+
Sbjct: 1824 DTVLRAKVDAAWNLHEATLDLDLSMFVLCSSIA 1856
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,601,630
Number of Sequences: 539616
Number of extensions: 7685912
Number of successful extensions: 22046
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 295
Number of HSP's that attempted gapping in prelim test: 21140
Number of HSP's gapped (non-prelim): 1017
length of query: 511
length of database: 191,569,459
effective HSP length: 122
effective length of query: 389
effective length of database: 125,736,307
effective search space: 48911423423
effective search space used: 48911423423
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)