BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010420
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 173/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 77 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 132
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 133 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 191
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ ++
Sbjct: 192 NKLQRTNP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLH 245
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++T Y L K P VL K +
Sbjct: 246 GKDPE-------TGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAAE 298
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 299 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 358
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
I + + LHR IW DD ++F PER+
Sbjct: 359 IMVLIPQLHRDKTIWGDDVEEFRPERF 385
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF 382
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF 382
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 37/330 (11%)
Query: 181 LAEILEFVMGKGLIPADGEI--------WRVRRRAIVPALHQK----YVAAMIDLFGKAT 228
L++ L+FV DGE W+ ++P+ Q+ Y A M+D+
Sbjct: 71 LSQALKFVRD---FAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----A 123
Query: 229 DRLCKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLR 286
+L +K + ++ E E+ +RLTLD IG FNY F+S D + ++ L
Sbjct: 124 VQLVQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALD 182
Query: 287 EAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEE 346
EA ++ P + P + + ++ +K++ND +D +IA ++ E+
Sbjct: 183 EAMNKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTH 236
Query: 347 YMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSK 406
+N +DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K
Sbjct: 237 MLNGKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQK 289
Query: 407 LQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKR 465
+E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++
Sbjct: 290 AAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEK 349
Query: 466 GEDIFISVWNLHRSPHIW-DDADKFNPERW 494
G+++ + + LHR IW DD ++F PER+
Sbjct: 350 GDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 74 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 129
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 130 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 188
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 189 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 242
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 243 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 295
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 296 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDE 355
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 356 LMVLIPQLHRDKTIWGDDVEEFRPERF 382
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 173/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 173/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 173/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL+ + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE+++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 172/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG + FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLSGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHET++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LI GHET++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T LIAGHE ++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 161/306 (52%), Gaps = 34/306 (11%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ R ++P L Q+ Y A M+D+ +L +K + S+ E E+ +RLTL
Sbjct: 97 WKKARNILLPRLSQQAMKGYHAMMVDI----AVQLVQKWERLNSD-EHIEVPEDMTRLTL 151
Query: 257 DVIGKAVFNYDFDSLTND------TGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR 310
D IG FNY +S D T +V A+ V+ + + R+ P ++
Sbjct: 152 DTIGLCGFNYRINSFYRDQPHPFITSMVRALDEVMNKLQ-RANPDDPAYD--------EN 202
Query: 311 LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
++ +K++ND +D +IA ++ E+ ++ +DP +G+ + +
Sbjct: 203 KRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLHGKDPE-------TGEPLDDEN 254
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKY 430
+R ++T LIAGHET++ +LT+ Y L K P VL K +E +L D P+ +K+LKY
Sbjct: 255 IRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKY 314
Query: 431 TARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADK 488
V+NE+LR++P P + ED +L G+YP+++G+++ + + LHR +W DD ++
Sbjct: 315 VGMVLNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEE 374
Query: 489 FNPERW 494
F PER+
Sbjct: 375 FRPERF 380
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 170/327 (51%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 71 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 126
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 127 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 185
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 186 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 239
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T L AGHE ++ +L++ Y L K P VL K +
Sbjct: 240 GKDPE-------TGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 292
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 293 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 352
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 353 LMVLIPQLHRDKTIWGDDVEEFRPERF 379
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 170/327 (51%), Gaps = 31/327 (9%)
Query: 181 LAEILEFV---MGKGLIPA--DGEIWRVRRRAIVPALHQK----YVAAMIDLFGKATDRL 231
L++ L+FV G GL + + W+ ++P+ Q+ Y A M+D+ +L
Sbjct: 72 LSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI----AVQL 127
Query: 232 CKKLDTAASEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAE 289
+K + ++ E E+ +RLTLD IG FNY F+S D + ++ L EA
Sbjct: 128 VQKWERLNAD-EHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAM 186
Query: 290 DRSVAPIPVWEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMN 349
++ P + P + + ++ +K++ND +D +IA ++ E+ +N
Sbjct: 187 NKLQRANP--DDPAYDE---NKRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLN 240
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQD 409
+DP +G+ + + +R ++T L AGHE ++ +L++ Y L K P VL K +
Sbjct: 241 GKDPE-------TGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAE 293
Query: 410 EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGED 468
E +L D P+ +K+LKY V+NE+LRL+P P + ED VL G+YP+++G++
Sbjct: 294 EAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDE 353
Query: 469 IFISVWNLHRSPHIW-DDADKFNPERW 494
+ + + LHR IW DD ++F PER+
Sbjct: 354 LMVLIPQLHRDKTIWGDDVEEFRPERF 380
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 160/306 (52%), Gaps = 34/306 (11%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EYIEVPEDMTRLTL 150
Query: 257 DVIGKAVFNYDFDSLTNDT------GIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPR 310
D IG FNY F+S D ++ A+ V+ + + R+ P ++
Sbjct: 151 DTIGLCGFNYRFNSFYRDQPHPFIISMIRALDEVMNKLQ-RANPDDPAYD--------EN 201
Query: 311 LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
++ +K++ND +D +IA ++ E+ + +N +DP +G+ +
Sbjct: 202 KRQFQEDIKVMNDLVDKIIA-DRKASGEQSDDLLTQMLNGKDPE-------TGEPLDDGN 253
Query: 371 LRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKY 430
+ ++T LIAGHET++ +L++ Y L K P VL K+ +E +L D P+ +K+LKY
Sbjct: 254 ISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKY 313
Query: 431 TARVINESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADK 488
V+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR IW DD ++
Sbjct: 314 VGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEE 373
Query: 489 FNPERW 494
F PER+
Sbjct: 374 FRPERF 379
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 32/359 (8%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGK-GLIPADGEIW 201
+G + R+ GPK+ V++P + L N + G L E LE ++GK G+ A+G +
Sbjct: 54 HGDVVRIKLGPKTVYAVTNPELTG-ALALNPDYHIAGPLWESLEGLLGKEGVATANGPLH 112
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVIGK 261
R +RR I PA + A +G + L G+ + S R+ + V +
Sbjct: 113 RRQRRTIQPAFRLDAIPA----YGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAAR 168
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPI-PVWEIPIWKDISPRLKKVNAALKL 320
+ + + V A+ TV R R V P+ P++ +P+ P ++ N AL
Sbjct: 169 CLLRGQYMDERAERLCV-ALATVFRGMYRRMVVPLGPLYRLPL-----PANRRFNDALAD 222
Query: 321 INDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS-ILHFLLAS----GDDVSSKQLRDDL 375
++ +D++IA E + Q P +L LL + GD + +++ D +
Sbjct: 223 LHLLVDEIIA--------------ERRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQV 268
Query: 376 MTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVI 435
+ +L G ET A+ + W L+ P +++DEV+++ G R D++KL++T VI
Sbjct: 269 VAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVI 328
Query: 436 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
E++RL P VL RR++ + LG Y I G DI S + + R P +DD +F+P+RW
Sbjct: 329 VEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW 387
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 157/302 (51%), Gaps = 26/302 (8%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 96 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EHIEVPEDMTRLTL 150
Query: 257 DVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV 314
D IG FNY F+S D + ++ L EA ++ P + P + + ++
Sbjct: 151 DTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANP--DDPAYDE---NKRQF 205
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDD 374
+K++ND +D +IA ++ E+ +N +DP +G+ + + +R
Sbjct: 206 QEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLNGKDPE-------TGEPLDDENIRYQ 257
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
++T L AGHE ++ +L++ Y L K P L K +E +L D P+ +K+LKY V
Sbjct: 258 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSYKQVKQLKYVGMV 317
Query: 435 INESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADKFNPE 492
+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR IW DD ++F PE
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPE 377
Query: 493 RW 494
R+
Sbjct: 378 RF 379
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 26/302 (8%)
Query: 201 WRVRRRAIVPALHQK----YVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
W+ ++P+ Q+ Y A M+D+ +L +K + ++ E E+ +RLTL
Sbjct: 97 WKKAHNILLPSFSQQAMKGYHAMMVDI----AVQLVQKWERLNAD-EHIEVPEDMTRLTL 151
Query: 257 DVIGKAVFNYDFDSLTNDTG--IVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV 314
D IG FNY F+S D + ++ L EA ++ P + P + + ++
Sbjct: 152 DTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLRRANP--DDPAYDE---NKRQF 206
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDD 374
+K++ND +D +IA ++ E+ +N +DP +G+ + + +R
Sbjct: 207 QEDIKVMNDLVDKIIA-DRKASGEQSDDLLTHMLNGKDPE-------TGEPLDDENIRYQ 258
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
++T L AGHE ++ +L++ Y L K P L K +E +L D P+ +K+LKY V
Sbjct: 259 IITFLAAGHEATSGLLSFALYFLVKNPHELQKAAEEAARVLVDPVPSHKQVKQLKYVGMV 318
Query: 435 INESLRLYPQPPVLIRRSLEDDVL-GKYPIKRGEDIFISVWNLHRSPHIW-DDADKFNPE 492
+NE+LRL+P P + ED VL G+YP+++G+++ + + LHR +W DD ++F PE
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 493 RW 494
R+
Sbjct: 379 RF 380
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 20/369 (5%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHIL-----KDNSKGYSKGILAEILEFVMGKGLIP-A 196
YG + R+ K+ +IV+ P K L +SK Y + + E + G+GL+
Sbjct: 23 YGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMY-RALQTVFGERLFGQGLVSEC 81
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W +RR I A + + ++++ F + ++L + L+ A M+ + + +
Sbjct: 82 NYERWHKQRRVIDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAM 141
Query: 257 DVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNA 316
D++ KA F + L + ++ E S + + +P + +L++V
Sbjct: 142 DILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKF-LPGKRK---QLREVRE 197
Query: 317 ALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLM 376
+++ + D + + E L+ EE + IL + DD + L D+ +
Sbjct: 198 SIRFLRQVGRDWVQRRR-----EALKRGEEVPADILTQILKAEEGAQDD---EGLLDNFV 249
Query: 377 TMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTIGDMKKLKYTARVI 435
T IAGHETSA L +T LS++P ++++LQ EVD ++G R+ D+ +L+Y ++V+
Sbjct: 250 TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVL 309
Query: 436 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 495
ESLRLYP R E+ ++ + + S + + R ++D FNP+R+
Sbjct: 310 KESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFG 369
Query: 496 LDGPNPNET 504
P P T
Sbjct: 370 PGAPKPRFT 378
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 170/374 (45%), Gaps = 34/374 (9%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 42 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 100
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 101 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 160
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 161 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 220
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 221 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 264
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPT 421
S +S +L + + AG+ET+++VL++ Y L+ P V KLQ+E+D++L ++ P
Sbjct: 265 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 324
Query: 422 IGD-MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 480
D + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 325 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 384
Query: 481 HIWDDADKFNPERW 494
W + +KF PER+
Sbjct: 385 KYWTEPEKFLPERF 398
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 170/374 (45%), Gaps = 34/374 (9%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 43 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 101
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 102 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 161
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 162 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 221
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 222 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 265
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPT 421
S +S +L + + AG+ET+++VL++ Y L+ P V KLQ+E+D++L ++ P
Sbjct: 266 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 325
Query: 422 IGD-MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 480
D + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 326 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 385
Query: 481 HIWDDADKFNPERW 494
W + +KF PER+
Sbjct: 386 KYWTEPEKFLPERF 399
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 170/374 (45%), Gaps = 34/374 (9%)
Query: 138 ELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL-KDNSKGYSKGILAEILEFVMGKGLIPA 196
E + YG ++ G + L ++DP M K +L K+ ++ + F M + A
Sbjct: 41 ECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF-MKSAISIA 99
Query: 197 DGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTL 256
+ E W+ R + P + M+ + + D L + L A G+ ++ +F ++
Sbjct: 100 EDEEWKRLRSLLSPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSM 159
Query: 257 DVIGKAVFNYDFDSLTNDTG-IVEAVYTVLR-EAEDRSVAPIPVWE--IPIW-------- 304
DVI F + DSL N VE +LR + D I V+ IPI
Sbjct: 160 DVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF 219
Query: 305 -KDISPRLKKVNAALK--LINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++++ L+K +K + DT + + M+D + + E
Sbjct: 220 PREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE---------------- 263
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFP- 420
S +S +L + + AG+ET+++VL++ Y L+ P V KLQ+E+D++L ++ P
Sbjct: 264 SHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPP 323
Query: 421 TIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 480
T + +++Y V+NE+LRL+P L R +D + I +G + I + LHR P
Sbjct: 324 TYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDP 383
Query: 481 HIWDDADKFNPERW 494
W + +KF PER+
Sbjct: 384 KYWTEPEKFLPERF 397
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 174/384 (45%), Gaps = 44/384 (11%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMG--KGL 193
++L YG I+ + G K+ +IV +AK +L K +S L+ KG+
Sbjct: 35 FFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGI 94
Query: 194 IPAD-GEIWRVRRRAIVP--ALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL 250
AD G W++ RR + AL + + + + LC L T + D +
Sbjct: 95 AFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISF-PV 153
Query: 251 FSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLRE--AEDRSVAPIPVWEIPIWKDIS 308
F +T +VI FN + + + +++ + + ++D V +P W I
Sbjct: 154 FVAVT-NVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVP------WLKIF 206
Query: 309 PR--LKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLAS---- 362
P L+K+ + +K+ ND L+ ++ + E++ ++ ++L L+ +
Sbjct: 207 PNKTLEKLKSHVKIRNDLLNKILE-----------NYKEKFRSDSITNMLDTLMQAKMNS 255
Query: 363 -----GDDVSSKQLRDDLMTMLI-----AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVD 412
G D S+ L D+ + I AG ET+ +V+ WT L P V KL +E+D
Sbjct: 256 DNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEID 315
Query: 413 SILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLI-RRSLEDDVLGKYPIKRGEDIF 470
+G R PTI D +L I E LRL P P+LI ++ D +G++ + +G ++
Sbjct: 316 QNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVI 375
Query: 471 ISVWNLHRSPHIWDDADKFNPERW 494
I++W LH + W D+F PER+
Sbjct: 376 INLWALHHNEKEWHQPDQFMPERF 399
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 161/341 (47%), Gaps = 21/341 (6%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMG---KGLIPADG 198
YG R+ + LI+S S HI+K N YS +++ +G KG+I +
Sbjct: 80 VYGEFMRVWISGEETLIISKSSSMFHIMKHNH--YSSRFGSKLGLQCIGMHEKGIIFNNN 137
Query: 199 -EIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLD 257
E+W+ R + AL + M+ + ++ +L+ +E ++ +L R+ LD
Sbjct: 138 PELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLD 197
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAA 317
D ++ IV + + + P I+ IS KK +
Sbjct: 198 TSNTLFLRIPLD----ESAIVVKIQGYFDAWQALLIKP------DIFFKISWLYKKYEKS 247
Query: 318 LKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMT 377
+K + D ++ LIA +R + EE EE M+ IL D++ + + ++
Sbjct: 248 VKDLKDAIEVLIAEKRRRISTEEKL--EECMDFATELILA---EKRGDLTRENVNQCILE 302
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINE 437
MLIA +T + L + +L++K P V + E+ +++G+R I D++KLK I E
Sbjct: 303 MLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYE 362
Query: 438 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
S+R P +++R++LEDDV+ YP+K+G +I +++ +HR
Sbjct: 363 SMRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHR 403
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 156/375 (41%), Gaps = 46/375 (12%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + GP+ +++ + L D ++ +S +G +A + F G G+I A+G W
Sbjct: 43 YGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKIAMVDPFFRGYGVIFANGNRW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
+V RR V + FG + +++ A S+G + LF
Sbjct: 103 KVLRRFSVTTMRD---------FGMGKRSVEERIQEEAQCLIEELRKSKGALMDPTFLFQ 153
Query: 253 RLTLDVIGKAVFNYDF-----------DSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEI 301
+T ++I VF F + ++ +V+ L E + P
Sbjct: 154 SITANIICSIVFGKRFHYQDQEFLKMLNLFYQTFSLISSVFGQLFELFSGFLKHFPGAHR 213
Query: 302 PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA 361
++K++ + +++ +TLD + + ++D L +E N
Sbjct: 214 QVYKNLQEINAYIGHSVEKHRETLDP--SAPRDLIDTYLLHMEKEKSNAHS--------- 262
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFP 420
+ S + L + +++ AG ET++ L + F L+ K P V ++ E++ ++G R P
Sbjct: 263 ---EFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPP 319
Query: 421 TIGDMKKLKYTARVINESLRLYPQPPVLIRRSL-EDDVLGKYPIKRGEDIFISVWNLHRS 479
+ D K+ YT VI E R P+ + + + Y I + ++F+ +
Sbjct: 320 ELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHD 379
Query: 480 PHIWDDADKFNPERW 494
PH ++ D FNP+ +
Sbjct: 380 PHYFEKPDAFNPDHF 394
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 160/380 (42%), Gaps = 46/380 (12%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGK---- 191
L E + YG IFR+ G + + PS+ + + + S + + + +
Sbjct: 54 LAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTESAHPQRLEIKPWKAYRDHRNEAY 113
Query: 192 GLIPADGEIWRVRRRAIVPALHQ--------KYVAAMIDLFGKATDRLCKKLDTAASEGE 243
GL+ +G+ W+ R A L + K + ++ F + D LC + G
Sbjct: 114 GLMILEGQEWQRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDE------RGR 167
Query: 244 DAEMESLFSRLTLDVIGKAVFNYDFDSLTNDT-----GIVEAVYTVLREAEDRSVAPIPV 298
++ S ++ + + I ++ F L +T + A+ T++ V P+
Sbjct: 168 IPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPV-- 225
Query: 299 WEIPIWKDISPRLK-KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILH 357
++ RL KV A L DT+ + C +D ++ Q P
Sbjct: 226 -------ELHKRLNTKVWQAHTLAWDTIFKSVKPC---IDNRLQRY------SQQPGA-D 268
Query: 358 FL--LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL 415
FL + D +S K+L + + +A ET+A L W Y LS+ P +L EV S+L
Sbjct: 269 FLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVL 328
Query: 416 GD-RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVW 474
D + P D++ + Y + ES+RL P P R + VLG+Y + +G + ++
Sbjct: 329 PDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQ 388
Query: 475 NLHRSPHIWDDADKFNPERW 494
L S ++D+ KF PERW
Sbjct: 389 VLGSSEDNFEDSHKFRPERW 408
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 43/388 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR +A M D FG + +++ A S+G + LF
Sbjct: 103 RALRRF--------SLATMRD-FGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 HFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTI 422
+ L ++++ AG ET++ L + F L+ K P V ++Q E++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 481
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 482 IWDDADKFNPERWPLDGPNPNETNQDYW 509
++ + FNP + LD + N+ +
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEGFM 408
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTI 422
+ L ++++ AG ET++ L + F L+ K P V ++Q E++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 481
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 482 IWDDADKFNPERWPLDGPNPNETNQDYW 509
++ + FNP + LD + N+ +
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEGFM 408
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTI 422
+ L ++++ AG ET++ L + F L+ K P V ++Q E++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 481
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 482 IWDDADKFNPERWPLDGPNPNETNQDYW 509
++ + FNP + LD + N+ +
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEGFM 408
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 167/388 (43%), Gaps = 43/388 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR +A M D FG + +++ A S+G + LF
Sbjct: 103 RALRRF--------SLATMRD-FGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTI 422
+ L ++++ AG ET++ L + F L+ K P V ++Q E++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 481
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 482 IWDDADKFNPERWPLDGPNPNETNQDYW 509
++ + FNP + LD + N+ +
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEGFM 408
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 165/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ K L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G+ ++GE + RR + A + FG + +++ A
Sbjct: 82 QATFDWLFKGYGVAFSNGERAKQLRR---------FSIATLRGFGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTHGANIDPTFFLSRTVSNVISSIVFGDRFD--YEDKEFLSLLRMMLGSFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
+ + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 ATSTGQLYEMFSSVMKHLPGPQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + AG ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ YT VI+E R P+ L R +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G ++F + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHF 394
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + G + +++ + L D ++ +S +G +A + G G+I A+GE W
Sbjct: 43 YGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERW 102
Query: 202 RVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA---------SEGEDAEMESLFS 252
R RR + A + FG + +++ A S+G + LF
Sbjct: 103 RALRR---------FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFH 153
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+T ++I VF FD + V+ L + +S + I + +++ S LK
Sbjct: 154 SITSNIICSIVFGKRFD-------YKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLK 206
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVS--- 367
+ I L ++ + V++ H ++ +P I +LL D S
Sbjct: 207 YFPGTHRQIYRNLQEINTFIGQSVEK-----HRATLDPSNPRDFIDVYLLRMEKDKSDPS 261
Query: 368 ----SKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTI 422
+ L ++++ AG ET++ L + F L+ K P V ++Q E++ ++G R P +
Sbjct: 262 SEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPAL 321
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGK-YPIKRGEDIFISVWNLHRSPH 481
D K+ YT VI+E RL P + ++ D + Y I + ++F + + P
Sbjct: 322 DDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPR 381
Query: 482 IWDDADKFNPERWPLDGPNPNETNQDYW 509
++ + FNP + LD + N+ +
Sbjct: 382 YFETPNTFNPGHF-LDANGALKRNEGFM 408
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGSFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + AG ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFFAGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G +++ + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 166/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + A + FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRR---------FSIATLRDFGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G +++ + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLNLFIGGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G +++ + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + L FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRRFSIATLRD---------FGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + I G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFIGGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G +++ + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 33/370 (8%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPAD-GE 199
YG IF L G S ++++ + K L S+ ++ + L ++ GL+ + G
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGR 105
Query: 200 IWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTA--ASEGEDAEMESLFSRLTLD 257
W RR V + +Y F K + A +G + + L + +
Sbjct: 106 GWVDHRRLAVNSF--RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV--- 314
+ +F F DT + E + A + ++ W I P K
Sbjct: 164 ITNLIIFGERFT--YEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLF 221
Query: 315 -NAALKLINDTLDDLIAICKRMVDEEEL---QFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
NAA+ + D L LI K V+ + F + Y++E D +D SS
Sbjct: 222 RNAAV--VYDFLSRLIE--KASVNRKPQLPQHFVDAYLDEMD--------QGKNDPSSTF 269
Query: 371 LRDDLM----TMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDM 425
+++L+ ++IAG ET+ VL W ++ P + ++Q E+D I+G + P+ D
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 426 KKLKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
K+ YT V++E LR P+ + + ED V+ Y I +G + +++++H W
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 485 DADKFNPERW 494
D + F+PER+
Sbjct: 390 DPEVFHPERF 399
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 33/370 (8%)
Query: 142 TYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPAD-GE 199
YG IF L G S ++++ + K L S+ ++ + L ++ GL+ + G
Sbjct: 46 VYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGR 105
Query: 200 IWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTA--ASEGEDAEMESLFSRLTLD 257
W RR V + +Y F K + A +G + + L + +
Sbjct: 106 GWVDHRRLAVNSF--RYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSN 163
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV--- 314
+ +F F DT + E + A + ++ W I P K
Sbjct: 164 ITNLIIFGERFT--YEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLF 221
Query: 315 -NAALKLINDTLDDLIAICKRMVDEEEL---QFHEEYMNEQDPSILHFLLASGDDVSSKQ 370
NAA+ + D L LI K V+ + F + Y++E D +D SS
Sbjct: 222 RNAAV--VYDFLSRLIE--KASVNRKPQLPQHFVDAYLDEMD--------QGKNDPSSTF 269
Query: 371 LRDDLM----TMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDM 425
+++L+ ++IAG ET+ VL W ++ P + ++Q E+D I+G + P+ D
Sbjct: 270 SKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDK 329
Query: 426 KKLKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
K+ YT V++E LR P+ + + ED V+ Y I +G + +++++H W
Sbjct: 330 CKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR 389
Query: 485 DADKFNPERW 494
D + F+PER+
Sbjct: 390 DPEVFHPERF 399
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 166/396 (41%), Gaps = 46/396 (11%)
Query: 122 GAVNAIRSEAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGI 180
G + +E + L ++ YG +F + GP+ +++ + L D ++ +S +G
Sbjct: 22 GNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGE 81
Query: 181 LAEILEFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAA- 239
A G G++ ++GE + RR + A + FG + +++ A
Sbjct: 82 QATFDWVFKGYGVVFSNGERAKQLRR---------FSIATLRDFGVGKRGIEERIQEEAG 132
Query: 240 --------SEGEDAEMESLFSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDR 291
+ G + + SR +VI VF FD D + + +L +
Sbjct: 133 FLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFD--YKDKEFLSLLRMMLGIFQFT 190
Query: 292 SVAPIPVWEI--PIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEE--------- 340
S + ++E+ + K + ++ L+ + D + + +R +D
Sbjct: 191 STSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFL 250
Query: 341 LQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKE 400
++ EE E++P+ +L K L + + + G ET + L + F LL K
Sbjct: 251 IRMQEE---EKNPNTEFYL---------KNLVMTTLQLFVGGTETVSTTLRYGFLLLMKH 298
Query: 401 PAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVL 458
P V +K+ +E+D ++G +R P D K+ Y VI+E R P+ L RR +D
Sbjct: 299 PEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 459 GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +G +++ + ++ R P + + FNP+ +
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHF 394
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 148/382 (38%), Gaps = 31/382 (8%)
Query: 134 LPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHIL---KDNSKGYSKGILAEILEFVMG 190
L L + YG + ++ G +++S + L D+ KG ++
Sbjct: 34 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQS 93
Query: 191 KGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL 250
P G +W RRR L +A+ A+ C E E E L
Sbjct: 94 MSFSPDSGPVWAARRRLAQNGLKSFSIAS-----DPASSTSC-----YLEEHVSKEAEVL 143
Query: 251 FSRLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIW------ 304
S L + G FN + + T ++ A+ R + V +
Sbjct: 144 ISTLQELMAGPGHFNPYRYVVVSVTNVICAICFGRRYDHNHQELLSLVNLNNNFGEVVGS 203
Query: 305 ---KDISPRLKKV-NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNE-QDPSILHFL 359
D P L+ + N +L D + + ++MV E F + ++ + D I H
Sbjct: 204 GNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQ 263
Query: 360 LASGDDVSSKQLRDD-----LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSI 414
D+ ++ QL D+ ++ + AG +T ++W+ L P V K+Q+E+D++
Sbjct: 264 EKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTV 323
Query: 415 LG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFIS 472
+G R P + D L Y I E+ R P I S D L + I +G +F++
Sbjct: 324 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVN 383
Query: 473 VWNLHRSPHIWDDADKFNPERW 494
W ++ +W + +F PER+
Sbjct: 384 QWQINHDQKLWVNPSEFLPERF 405
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 361 ASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRF 419
ASG+ + +++ + + + AG +T ++W+ L +P + K+Q E+D+++G +R
Sbjct: 273 ASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR 332
Query: 420 PTIGDMKKLKYTARVINESLRLYPQPPVLIRRSL-EDDVLGKYPIKRGEDIFISVWNLHR 478
P + D +L Y I E+ R P I S D L + I + +F++ W ++
Sbjct: 333 PRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNH 392
Query: 479 SPHIWDDADKFNPERW 494
P +W+D +F PER+
Sbjct: 393 DPELWEDPSEFRPERF 408
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 147/368 (39%), Gaps = 25/368 (6%)
Query: 140 YLTYGGIFRLTFGPKSFLIVSDPSMAKHILKD-NSKGYSKGILAEILEFVMGKGL-IPAD 197
Y YG +F T K+F + A + N ++ + + + V GKG+
Sbjct: 41 YEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVP 100
Query: 198 GEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLD 257
++ +++ + L+ + + + K T ++ GE E+L S L +
Sbjct: 101 NPVFLEQKKMLKSGLNIAHFKQHVSIIEKETKEY---FESWGESGEKNVFEAL-SELIIL 156
Query: 258 VIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAA 317
+ + S N+ V +Y L + W +P W + P ++ + A
Sbjct: 157 TASHCLHGKEIRSQLNEK--VAQLYADLDGGFSHAA-----WLLPGWLPL-PSFRRRDRA 208
Query: 318 LKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMT 377
+ I D AI KR +E++ ++ ++L G ++ ++ L+
Sbjct: 209 HREIKDIFYK--AIQKRRQSQEKI-------DDILQTLLDATYKDGRPLTDDEVAGMLIG 259
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFP--TIGDMKKLKYTARVI 435
+L+AG TS+ W + L+++ + K E ++ G+ P T +K L R I
Sbjct: 260 LLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319
Query: 436 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 495
E+LRL P +++R + + Y I G + +S R W + FNP+R+
Sbjct: 320 KETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYL 379
Query: 496 LDGPNPNE 503
D P E
Sbjct: 380 QDNPASGE 387
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 349 NEQDPS---ILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEP 401
+Q PS L LLA+ DD +S +L+D ++ +L AGHET + L+ LL +
Sbjct: 215 QQQPPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHS 274
Query: 402 AVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKY 461
+ +++ E + + + T +KK+ Y +V+ E LRL P R ++D +
Sbjct: 275 DIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGF 334
Query: 462 PIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 498
+G + + H P ++ D +KF+PER+ DG
Sbjct: 335 HFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDG 371
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 381 AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESL 439
A +T + L W L ++ P V +++Q E+D ++G DR P +GD L Y + E++
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAM 349
Query: 440 RLYPQPPVLIRRSLEDD--VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
R PV I + + VLG Y I + +F++ W+++ P W + + F+P R+
Sbjct: 350 RFSSFVPVTIPHATTANTSVLG-YHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARF 405
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 162/379 (42%), Gaps = 28/379 (7%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG K +++ K L D + +S +GI G G++
Sbjct: 37 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 96
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 97 FSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 154
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLK 312
+VI +F+ FD + + L E + ++ + I I + SP +
Sbjct: 155 CAPCNVICSIIFHKRFD-------YKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIID 207
Query: 313 KVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLA-------SG 363
++ L +A K + E+++ H+E M+ +P I FL+
Sbjct: 208 YFPGT----HNKLLKNVAFMKSYI-LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQP 262
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTI 422
+ + + L + + + AG ET++ L + LL K P V +K+Q+E++ ++G +R P +
Sbjct: 263 SEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCM 322
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPH 481
D + YT V++E R P + ++ D+ Y I +G I IS+ ++
Sbjct: 323 QDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNK 382
Query: 482 IWDDADKFNPERWPLDGPN 500
+ + + F+P + +G N
Sbjct: 383 EFPNPEMFDPHHFLDEGGN 401
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 161/380 (42%), Gaps = 30/380 (7%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG K +++ K L D + +S +GI G G++
Sbjct: 35 LTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIV 94
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 95 FSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 152
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWE-IPIWKDISPRL 311
+VI +F+ FD D + + + E S I V+ P D P
Sbjct: 153 CAPCNVICSIIFHKRFDY--KDQQFLNLMEKLNENIEILSSPWIQVYNNFPALLDYFPGT 210
Query: 312 KKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLA-------S 362
KL+ + +A K + E+++ H+E M+ +P I FL+
Sbjct: 211 HN-----KLLKN-----VAFMKSYI-LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQ 259
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPT 421
+ + + L + + + AG ET++ L + LL K P V +K+Q+E++ ++G +R P
Sbjct: 260 PSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPC 319
Query: 422 IGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSP 480
+ D + YT V++E R P + ++ D+ Y I +G I IS+ ++
Sbjct: 320 MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDN 379
Query: 481 HIWDDADKFNPERWPLDGPN 500
+ + + F+P + +G N
Sbjct: 380 KEFPNPEMFDPHHFLDEGGN 399
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 34/319 (10%)
Query: 200 IWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVI 259
+W+ ++ AL ++M + T C+++ A G ++ FS LT +I
Sbjct: 116 LWKAHKKLTRSALLLGTRSSMEPWVDQLTQEFCERMRVQA--GAPVTIQKEFSLLTCSII 173
Query: 260 GKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKV-NAAL 318
F D+L + + V +++ + W I I D+ P L+ N L
Sbjct: 174 CYLTFGNKEDTLVH--AFHDCVQDLMKTWDH--------WSIQI-LDMVPFLRFFPNPGL 222
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYM-NEQDPSILHFLLAS---------GDDVSS 368
+ +++ + + E++L+ H+E M Q + ++L +
Sbjct: 223 WRLKQAIEN-----RDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE 277
Query: 369 KQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFP----TIGD 424
+ ++ + I G ET+A+ L+W L P + +LQ+E+D LG T D
Sbjct: 278 GHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKD 337
Query: 425 MKKLKYTARVINESLRLYPQPPV-LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIW 483
+L I E LRL P P+ L R+ + Y I G + ++ H +W
Sbjct: 338 RARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW 397
Query: 484 DDADKFNPERWPLDGPNPN 502
+ +F P+R+ G NP+
Sbjct: 398 EQPHEFRPDRFLEPGANPS 416
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 353 PSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVD 412
P IL+ LL S + + + ++ ++ ML G T++ L W Y +++ V L++EV
Sbjct: 260 PGILYCLLKS-EKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV- 317
Query: 413 SILGDRFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGED 468
L R GD+ K+ + I E+LRL+P L R D VL Y I
Sbjct: 318 --LNARRQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTL 375
Query: 469 IFISVWNLHRSPHIWDDADKFNPERW 494
+ ++++ + R P + DKF+P RW
Sbjct: 376 VQVAIYAMGRDPAFFSSPDKFDPTRW 401
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 361 ASGDDVSS---KQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD 417
A G+ SS + LR + + AG T++ L W L+ P V ++Q E+D ++G
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
Query: 418 -RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWN 475
R P +GD + YT VI+E R P+ + D+ + + I +G + ++ +
Sbjct: 320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSS 379
Query: 476 LHRSPHIWDDADKFNPERW 494
+ + +W+ +F+PE +
Sbjct: 380 VLKDEAVWEKPFRFHPEHF 398
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 361 ASGDDVSS---KQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD 417
A G+ SS + LR + + AG T++ L W L+ P V ++Q E+D ++G
Sbjct: 260 AKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
Query: 418 -RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWN 475
R P +GD + YT VI+E R P+ + D+ + + I +G + ++ +
Sbjct: 320 VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSS 379
Query: 476 LHRSPHIWDDADKFNPERW 494
+ + +W+ +F+PE +
Sbjct: 380 VLKDEAVWEKPFRFHPEHF 398
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSI 414
IL+ LL +S + ++ ++ ML G +T++ L W Y +++ V L+ EV
Sbjct: 261 ILYRLLGDSK-MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV--- 316
Query: 415 LGDRFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIF 470
L R GDM + + I E+LRL+P L R + D VL Y I +
Sbjct: 317 LAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQ 376
Query: 471 ISVWNLHRSPHIWDDADKFNPERW 494
++++ L R P + D + F+P RW
Sbjct: 377 VAIYALGREPTFFFDPENFDPTRW 400
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 8/144 (5%)
Query: 355 ILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSI 414
IL+ LL +S + ++ ++ ML G +T++ L W Y +++ V L+ EV
Sbjct: 258 ILYRLLGDSK-MSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV--- 313
Query: 415 LGDRFPTIGDMKKLKYTARV----INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIF 470
L R GDM + + I E+LRL+P L R + D VL Y I +
Sbjct: 314 LAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQ 373
Query: 471 ISVWNLHRSPHIWDDADKFNPERW 494
++++ L R P + D + F+P RW
Sbjct: 374 VAIYALGREPTFFFDPENFDPTRW 397
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 163/388 (42%), Gaps = 36/388 (9%)
Query: 136 LYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLI 194
L L YG +F L FG + +++ + K L D + +S +G G G++
Sbjct: 37 LTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALIDLGEEFSGRGHFPLAERANRGFGIV 96
Query: 195 PADGEIWRVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFS 252
++G+ W+ RR + L + ++ D + L ++L + D +
Sbjct: 97 FSNGKRWKEIRRFSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTF--ILG 154
Query: 253 RLTLDVIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEI----PIWKDIS 308
+VI +F FD D + + + E+ + P +I P D
Sbjct: 155 CAPCNVICSIIFQKRFDY--KDQQFLNLMEKL---NENIRIVSTPWIQICNNFPTIIDYF 209
Query: 309 PRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDV 366
P N LK + D++ E+++ H+E M+ +P I FL+ +
Sbjct: 210 PGTH--NKLLKNLAFMESDIL---------EKVKEHQESMDINNPRDFIDCFLIKMEKEK 258
Query: 367 SSKQLRDDLMTMLI-------AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DR 418
++Q + ++I AG ET++ L + LL K P V +K+Q+E++ ++G +R
Sbjct: 259 QNQQSEFTIENLVITAADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNR 318
Query: 419 FPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLH 477
P + D + YT V++E R P + ++ DV Y I +G I S+ ++
Sbjct: 319 SPCMQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTILTSLTSVL 378
Query: 478 RSPHIWDDADKFNPERWPLDGPNPNETN 505
+ + + F+P + +G N ++N
Sbjct: 379 HDNKEFPNPEMFDPRHFLDEGGNFKKSN 406
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 157/386 (40%), Gaps = 38/386 (9%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYS-KGILAEILEFVMGKGLIPADGEIW 201
YG +F + FG ++ K L DN + +S +G G G+I ++G+ W
Sbjct: 43 YGPVFTVYFGMNPIVVFHGYEAVKEALIDNGEEFSGRGNSPISQRITKGLGIISSNGKRW 102
Query: 202 RVRRRAIVPALHQKYVA--AMIDLFGKATDRLCKKLDTAASEGEDAEMESLFSRLTLDVI 259
+ RR + L + ++ D + L ++L + D + +VI
Sbjct: 103 KEIRRFSLTTLRNFGMGKRSIEDRVQEEAHCLVEELRKTKASPCDPTF--ILGCAPCNVI 160
Query: 260 GKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEI----PIWKDISPRLKKVN 315
VF FD + + + R E+ + P ++ P+ D P N
Sbjct: 161 CSVVFQKRFDYKDQN-----FLTLMKRFNENFRILNSPWIQVCNNFPLLIDCFPGTH--N 213
Query: 316 AALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPS--ILHFLLASGDDVSSKQ--- 370
LK + T R E+++ H+ ++ +P I FL+ + +++
Sbjct: 214 KVLKNVALT---------RSYIREKVKEHQASLDVNNPRDFIDCFLIKMEQEKDNQKSEF 264
Query: 371 ----LRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDM 425
L + + +AG ET++ L + LL K P V +K+Q+E+D ++G R P + D
Sbjct: 265 NIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDR 324
Query: 426 KKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWD 484
+ YT V++E R P + ++ D Y I +G I + ++ +
Sbjct: 325 SHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFP 384
Query: 485 DADKFNPERWPLDGPNPNETNQDYWL 510
+ + F+P + LD N N DY++
Sbjct: 385 NPNIFDPGHF-LDK-NGNFKKSDYFM 408
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTIGDM 425
S+ ++ ++M+ AGH TS+ +WT L + + + DE+D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 426 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 485
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 486 ADKFNPERW 494
F P R+
Sbjct: 362 PHDFVPARY 370
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTIGDM 425
S+ ++ ++M+ AGH TS+ +WT L + + + DE+D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 426 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 485
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 486 ADKFNPERW 494
F P R+
Sbjct: 362 PHDFVPARY 370
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTIGDM 425
S+ ++ ++M+ AGH TS+ +WT L + + + DE+D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 426 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 485
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 486 ADKFNPERW 494
F P R+
Sbjct: 362 PHDFVPARY 370
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
Query: 367 SSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGD-RFPTIGDM 425
S+ ++ ++M+ AGH TS+ +WT L + + + DE+D + GD R + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 426 KKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDD 485
+++ V+ E+LRL+P +L+R + + + + I G+ + S +R P + D
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 486 ADKFNPERW 494
F P R+
Sbjct: 362 PHDFVPARY 370
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVIN 436
+ AG ET++ L + +L K P + KL +E+D ++G R P I D +++ Y V++
Sbjct: 275 LFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVH 334
Query: 437 ESLRLYP-QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
E R P L + D + Y I +G + ++ ++ + D +KF PE +
Sbjct: 335 EIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHF 393
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 381 AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILG-DRFPTIGDMKKLKYTARVINESL 439
AG ET++ L ++ LL K P V +++Q+E++ ++G R P + D ++ YT VI+E
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQ 335
Query: 440 RLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 498
R P + ++ DV Y I +G DI S+ ++ + + F+P + LD
Sbjct: 336 RFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHF-LDE 394
Query: 499 PNPNETNQDYWL 510
N DY++
Sbjct: 395 SG-NFKKSDYFM 405
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 140/359 (38%), Gaps = 26/359 (7%)
Query: 143 YGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWR 202
YGGIF + +V D ++ S + + V G+G+ A
Sbjct: 36 YGGIFTMNICGNRITVVGDVHQHSKFFTPRNEILSPREVYSFMVPVFGEGVAYAAP---Y 92
Query: 203 VRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESL--FSRLTLDVIG 260
R R + L ++ A F + +K A ++ E+ L S + ++
Sbjct: 93 PRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINILDDCSAMIINTAC 152
Query: 261 KAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRLKKVNAALKL 320
+ +F D + + + + + + P V+ I K P+ + A
Sbjct: 153 QCLFGEDLRKRLDARQFAQLLAKM-----ESCLIPAAVFLPWILKLPLPQSYRCRDARAE 207
Query: 321 INDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLI 380
+ D L ++I + E+E + ++ +L + G +S ++ ++ +
Sbjct: 208 LQDILSEII-----IAREKEEAQKDTNTSDLLAGLLGAVYRDGTRMSQHEVCGMIVAAMF 262
Query: 381 AGHETSAAVLTWTFYLL--SKEPAVLSKLQDEVDSILGDRFPTIGD----MKKLKYTARV 434
AG TS TW+ L + L+KL E+D FP + M+++ + +
Sbjct: 263 AGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDE-----FPAQLNYDNVMEEMPFAEQC 317
Query: 435 INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
ES+R P +L+R+ L+ +GKY + G+ I S H+ + + ++NPER
Sbjct: 318 ARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER 376
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 373 DDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTA 432
+ +T+L+AGHET A+ LTW+F LLS P ++ + ++
Sbjct: 213 SEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA-----------------AL 255
Query: 433 RVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
E+LRLYP +L RR +LG+ + +G + +S + R + + + F PE
Sbjct: 256 AAFQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQRL--YFPEGEAFQPE 313
Query: 493 RW 494
R+
Sbjct: 314 RF 315
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 376 MTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVI 435
+T+L+AGHET A+ LTW+F LLS P ++ + ++
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEA-----------------ALAAF 258
Query: 436 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
E+LRLYP +L RR +LG+ + G + +S + R H D + F PER+
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL-HF-PDGEAFRPERF 315
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 155/388 (39%), Gaps = 44/388 (11%)
Query: 130 EAFFLPLYELYLTYGGIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVM 189
E L +++ + G IFR G + V P + + + +S + IL + +
Sbjct: 36 EHLHLEMHQTFQELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRMILEPWVAYRQ 95
Query: 190 GKG----LIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
+G + +G WR R + P + L KA R +D A + A
Sbjct: 96 HRGHKCGVFLLNGPEWRFNRLRLNPDV----------LSPKAVQRFLPMVDAVARDFSQA 145
Query: 246 EMESLFSR----LTLDVIGKAVFNYDFDS-----LTNDTGIV-----EAVYTVLREAEDR 291
+ + LTLDV ++F+Y ++ G+V A L E
Sbjct: 146 LKKKVLQNARGSLTLDV-QPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVM 204
Query: 292 SVAPIPVWEIP--IWKDISPRLKKVN-AALKLINDTLDDLIAICKRMVDEEELQFHEEYM 348
+ + + +P + + ISP++ K + A I D+ I +++ E + Y
Sbjct: 205 FKSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCI---QKIYQELAFNRPQHYT 261
Query: 349 NEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQ 408
+ LL + ++S + ++ + M + +T+A L T + L++ P V L+
Sbjct: 262 G----IVAELLLKA--ELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILR 315
Query: 409 DEVDSILGD--RFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRG 466
E + P +L + E+LRLYP L R D VL Y I G
Sbjct: 316 QESLAAAASISEHPQKAT-TELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAG 374
Query: 467 EDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + +++L R+ ++ +++NP+RW
Sbjct: 375 TLVQVFLYSLGRNAALFPRPERYNPQRW 402
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPT 421
SGD ++ ++ +LIAGHET+ ++ + + P + L + G R
Sbjct: 237 SGDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAAD-----GSR--- 288
Query: 422 IGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSP 480
+ VI E++R Y P L+ R DD+ +G + + +G+ + + + HR P
Sbjct: 289 ---------ASAVIEETMR-YDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDP 338
Query: 481 HIWDDADKFNPER 493
I D+F+P+R
Sbjct: 339 TIVGAPDRFDPDR 351
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIG 423
D ++ ++ + + IAGHET+ +++ + L + P L KL++ D I
Sbjct: 217 DKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENPDLI--------- 267
Query: 424 DMKKLKYTARVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHI 482
+ E LR Y P + R +D+ + I++GE +++ + +R P I
Sbjct: 268 --------GTAVEECLR-YESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSI 318
Query: 483 WDDADKFNPERWPLDGPNPN 502
+ + D F+ R PNP+
Sbjct: 319 FTNPDVFDITR----SPNPH 334
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
GD +S ++LRD L+ M+ AG+ET+ V+ + L P L+
Sbjct: 224 GDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLAL---------------- 267
Query: 423 GDMKKLKYT-ARVINESLRLYPQPPVL-IRRSLEDDVL--GKYPIKRGEDIFISVWNLHR 478
++K + T A V+ E+LR P L +R ++ D L G+ I RGE I S +R
Sbjct: 268 --VRKGEVTWADVVEETLRHEPAVKHLPLRYAVTDIALPDGRT-IARGEPILASYAAANR 324
Query: 479 SPHIWDDADKFNPER 493
P +DAD F+ R
Sbjct: 325 HPDWHEDADTFDATR 339
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 370 QLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLK 429
+LR + T+L+AG+ET+ L Y ++ P K+++ +
Sbjct: 242 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE----------------- 284
Query: 430 YTARVINESLRLYPQPPVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADK 488
+ + E LR P PV R + ED + I G +F+ HR P ++ DAD+
Sbjct: 285 LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADR 344
Query: 489 FN 490
F+
Sbjct: 345 FD 346
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 18/122 (14%)
Query: 370 QLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLK 429
+LR + T+L+AG+ET+ L Y ++ P K+++ +
Sbjct: 232 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE----------------- 274
Query: 430 YTARVINESLRLYPQPPVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADK 488
+ + E LR P PV R + ED + I G +F+ HR P ++ DAD+
Sbjct: 275 LAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADR 334
Query: 489 FN 490
F+
Sbjct: 335 FD 336
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 17/134 (12%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S K + ++ +L+A E + L Y L P ++++ +L DR
Sbjct: 251 GMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP-------EQMNDVLADR---- 299
Query: 423 GDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHI 482
R I E+LR P ++ R+ +D V+G IK+ +F + +R P
Sbjct: 300 ------SLVPRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEA 353
Query: 483 WDDADKFNPERWPL 496
++ D FN R L
Sbjct: 354 FEQPDVFNIHREDL 367
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S ++ ++ + AG TS+ TW+ L PA + L+ I + FP
Sbjct: 245 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEI--EEFPAQ 301
Query: 423 GD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S H
Sbjct: 302 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 361
Query: 479 SPHIWDDADKFNPER 493
+ + +++PER
Sbjct: 362 DEEAFPEPRRWDPER 376
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S ++ ++ + AG TS+ TW+ L PA + L+ I + FP
Sbjct: 246 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLM-HPANVKHLEALRKEI--EEFPAQ 302
Query: 423 GD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S H
Sbjct: 303 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 362
Query: 479 SPHIWDDADKFNPER 493
+ + +++PER
Sbjct: 363 DEEAFPEPRRWDPER 377
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S ++ ++ + AG TS+ TW+ L PA + L+ I + FP
Sbjct: 247 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEI--EEFPAQ 303
Query: 423 GD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S H
Sbjct: 304 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 363
Query: 479 SPHIWDDADKFNPER 493
+ + +++PER
Sbjct: 364 DEEAFPEPRRWDPER 378
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S ++ ++ + AG TS+ TW+ L PA + L+ I + FP
Sbjct: 259 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEI--EEFPAQ 315
Query: 423 GD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S H
Sbjct: 316 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 375
Query: 479 SPHIWDDADKFNPER 493
+ + +++PER
Sbjct: 376 DEEAFPEPRRWDPER 390
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 7/135 (5%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
G +S ++ ++ + AG TS+ TW+ L PA + L+ I + FP
Sbjct: 259 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPANVKHLEALRKEI--EEFPAQ 315
Query: 423 GD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S H
Sbjct: 316 LNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHH 375
Query: 479 SPHIWDDADKFNPER 493
+ + +++PER
Sbjct: 376 DEEAFPEPRRWDPER 390
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAV--LSKLQDEVDSILGDRFP 420
G +S ++ ++ + AG TS+ TW+ L V L L+ E++ FP
Sbjct: 246 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE-----FP 300
Query: 421 TIGD----MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL 476
+ M ++ + R ES+R P +L+R+ + D +G Y + +G+ I S
Sbjct: 301 AQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLS 360
Query: 477 HRSPHIWDDADKFNPER 493
H + + +++PER
Sbjct: 361 HHDEEAFPEPRRWDPER 377
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 403 VLSKLQDEVDSIL---GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL- 458
V ++L +E+ S++ G T+G ++K++ T V+ E LR P R+ +D V+
Sbjct: 317 VHNRLAEEIRSVIKSNGGEL-TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 459 ---GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ +K GE ++ R P I+D AD+F PER+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERF 414
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 403 VLSKLQDEVDSIL---GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL- 458
V ++L +E+ S++ G T+G ++K++ T V+ E LR P R+ +D V+
Sbjct: 317 VHNRLAEEIRSVIKSNGGEL-TMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 459 ---GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ +K GE ++ R P I+D AD+F PER+
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERF 414
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 43 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 99
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLF---SRLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 100 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 158
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 159 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 213
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 214 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 265
Query: 379 LIAGHETSAAVLTWTFYLL--SKEPAVLSKLQDEVDSILGDRFPTIGD----MKKLKYTA 432
+ AG TS +W+ L K L KL E+D FP + M ++ +
Sbjct: 266 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-----FPAQLNYDNVMDEMPFAE 320
Query: 433 RVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 491
R + ES+R P P +++ R ++ +V +G Y + +G+ I S H + + ++P
Sbjct: 321 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDP 379
Query: 492 ER 493
ER
Sbjct: 380 ER 381
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 37 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 93
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLF---SRLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 94 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 152
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 153 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 207
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 208 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 259
Query: 379 LIAGHETSAAVLTWTFYLL--SKEPAVLSKLQDEVDSILGDRFPTIGD----MKKLKYTA 432
+ AG TS +W+ L K L KL E+D FP + M ++ +
Sbjct: 260 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-----FPAQLNYDNVMDEMPFAE 314
Query: 433 RVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 491
R + ES+R P P +++ R ++ +V +G Y + +G+ I S H + + ++P
Sbjct: 315 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDP 373
Query: 492 ER 493
ER
Sbjct: 374 ER 375
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 145 GIFRLTFGPKSFLIVSDPSMAKHILKDNSKGYSKGILAEILEFVMGKGLIPADGEIWRVR 204
G+F ++ G + IV DP ++ S + I+ V G+G+ A R
Sbjct: 52 GVFTISIGGQRVTIVGDPHEHSRFFSPRNEILSPREVYTIMTPVFGEGVAYAAP---YPR 108
Query: 205 RRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDAEMESLF---SRLTLDVIGK 261
R + L ++ A F A +K A + ED + +L + ++ +
Sbjct: 109 MREQLNFLAEELTIAKFQNFVPAIQHEVRKF-MAENWKEDEGVINLLEDCGAMIINTACQ 167
Query: 262 AVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPV---WEIPIWKDISPRLKKVNAAL 318
+F D N + L + S+ P V W + + S R ++ A L
Sbjct: 168 CLFGEDLRKRLNARHFAQ-----LLSKMESSLIPAAVFMPWLLRLPLPQSARCREARAEL 222
Query: 319 KLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM 378
+ I L ++I + E+E + ++ +L + G +S ++ ++
Sbjct: 223 QKI---LGEII-----VAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIVAA 274
Query: 379 LIAGHETSAAVLTWTFYLL--SKEPAVLSKLQDEVDSILGDRFPTIGD----MKKLKYTA 432
+ AG TS +W+ L K L KL E+D FP + M ++ +
Sbjct: 275 MFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDE-----FPAQLNYDNVMDEMPFAE 329
Query: 433 RVINESLRLYPQPPVLIRRSLEDDV-LGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 491
R + ES+R P P +++ R ++ +V +G Y + +G+ I S H + + ++P
Sbjct: 330 RCVRESIRRDP-PLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDP 388
Query: 492 ER 493
ER
Sbjct: 389 ER 390
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 435 INESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ E R YP P L +D V K+G + + ++ + P +WD D+F PER+
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 325 LDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LI 380
+ ++ R++D + Q E+ +L L+ + D+ S+ ++L+ M L+
Sbjct: 211 MAEMSGYLSRLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLV 262
Query: 381 AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLR 440
AGHET+ ++ Y L P L+ L+ ++ + G + +M L+Y V + + R
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRADMTLLDG----AVEEM--LRYEGPVESATYR 316
Query: 441 LYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+P PV D+ G I G+ + + + + HR+P + D +F+ R
Sbjct: 317 -FPVEPV--------DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 325 LDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LI 380
+ ++ R++D + Q E+ +L L+ + D+ S+ ++L+ M L+
Sbjct: 211 MAEMSGYLSRLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLV 262
Query: 381 AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLR 440
AGHET+ ++ Y L P L+ L+ ++ + G + +M L+Y V + + R
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRADMTLLDG----AVEEM--LRYEGPVESATYR 316
Query: 441 LYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+P PV D+ G I G+ + + + + HR+P + D +F+ R
Sbjct: 317 -FPVEPV--------DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 325 LDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----LI 380
+ ++ R++D + Q E+ +L L+ + D+ S+ ++L+ M L+
Sbjct: 211 MAEMSGYLSRLIDSKRGQDGED--------LLSALVRTSDEDGSRLTSEELLGMAHILLV 262
Query: 381 AGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLR 440
AGHET+ ++ Y L P L+ L+ ++ + G + +M L+Y V + + R
Sbjct: 263 AGHETTVNLIANGMYALLSHPDQLAALRADMTLLDG----AVEEM--LRYEGPVESATYR 316
Query: 441 LYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+P PV D+ G I G+ + + + + HR+P + D +F+ R
Sbjct: 317 -FPVEPV--------DLDGTV-IPAGDTVLVVLADAHRTPERFPDPHRFDIRR 359
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 360 LASGDDVSSKQLRDDL---------MTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDE 410
L SG +V S+ + +L + +LIAG+ET+ +++
Sbjct: 179 LNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLIS------------------- 219
Query: 411 VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDI 469
+S++ RF +++ + I E+LR P +R++ E LG I+ GE +
Sbjct: 220 -NSVIDFTRFNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYV 278
Query: 470 FISVWNLHRSPHIWDDADKFNPERWPLDGPNPN 502
+ + + +R ++ D +KF P+R PNP+
Sbjct: 279 RVWIASANRDEEVFHDGEKFIPDR----NPNPH 307
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 17/118 (14%)
Query: 376 MTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVI 435
+ +L+AGHET+ + L + P +++D +L D G V+
Sbjct: 238 LVLLVAGHETTVNAIALGALTLIQHP-------EQIDVLLRDPGAVSG----------VV 280
Query: 436 NESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
E LR ++R + ED +G IK G+ + +S+ ++R +++ D F+ R
Sbjct: 281 EELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARR 338
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 34/153 (22%)
Query: 360 LASGDDVSSKQLRDDL---------MTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDE 410
L SG +V S+ + +L + +LIAG+ET+ +++
Sbjct: 179 LNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNETTTNLIS------------------- 219
Query: 411 VDSILG-DRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDI 469
+S++ RF +++ + I E+LR P +R++ E LG I+ GE +
Sbjct: 220 -NSVIDFTRFNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYV 278
Query: 470 FISVWNLHRSPHIWDDADKFNPERWPLDGPNPN 502
+ + + +R ++ D +KF P+R PNP+
Sbjct: 279 RVWIASANRDEEVFHDGEKFIPDR----NPNPH 307
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 363 GDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTI 422
GDD + ++LR + +++AG + + ++ + + P +++D+ GD
Sbjct: 218 GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHP-------EQIDAFRGDE---- 266
Query: 423 GDMKKLKYTARVINESLRL----YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHR 478
+ R ++E +R Y P + R ED L IK+G+ + S+ +R
Sbjct: 267 ------QSAQRAVDELIRYLTVPYSPTPRIAR---EDLTLAGQEIKKGDSVICSLPAANR 317
Query: 479 SPHIWDDADKFNPERWPL 496
P + D D+ + R P+
Sbjct: 318 DPALAPDVDRLDVTREPI 335
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 33/167 (19%)
Query: 342 QFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTM----------LIAGHETSAAVLT 391
Q H E + D I GDD+ S + DD +T+ LI G+ET+ +T
Sbjct: 205 QAHTEILVYFDELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAIT 264
Query: 392 WTFYLLSKEPAVLSKLQD---EVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVL 448
+ L+ P +L+ L+D +VD+ V+ E LR +
Sbjct: 265 GAVHALATVPGLLTALRDGSADVDT--------------------VVEEVLRWTSPAMHV 304
Query: 449 IRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWP 495
+R + D + + G + + +R P +DD D F P R P
Sbjct: 305 LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKP 351
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 34/208 (16%)
Query: 305 KDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHE------EYMN--------- 349
+D P + K+ +++ + +A ++ DE +FHE +Y N
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC 233
Query: 350 --EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKL 407
+ S+L G+ + K + + + AGH+T+++ LS+ P L+
Sbjct: 234 PKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLA-- 291
Query: 408 QDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGE 467
L P + R+++E++R +R +L D + IKRG+
Sbjct: 292 -------LAKSDPAL--------IPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGD 336
Query: 468 DIFISVWNLHRSPHIWDDADKFNPERWP 495
I +S + +R ++ + D+F+ R+P
Sbjct: 337 RIMLSYPSANRDEEVFSNPDEFDITRFP 364
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 432 ARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 491
A +INE +R+ P +R ED +G I+ G I + +R P ++DD D F+
Sbjct: 267 AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 326
Query: 492 ERWP 495
R P
Sbjct: 327 TRPP 330
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 432 ARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNP 491
A +INE +R+ P +R ED +G I+ G I + +R P ++DD D F+
Sbjct: 265 AAIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDH 324
Query: 492 ERWP 495
R P
Sbjct: 325 TRPP 328
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 71/319 (22%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDR 418
D +S ++L D + +L+AG+E++ + YLL P + +L D + I
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELI---- 287
Query: 419 FPTIGDMKKLKYTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL 476
P+ + E R P + R ++ED L I+ GE + S
Sbjct: 288 -PS------------AVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAA 334
Query: 477 HRSPHIWDDADKFNPERWP 495
+R + DAD+ + +R P
Sbjct: 335 NRDQAQFPDADRIDVDRTP 353
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 126/319 (39%), Gaps = 71/319 (22%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDR 418
D +S ++L D + +L+AG+E++ + YLL P + +L D + I
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELI---- 287
Query: 419 FPTIGDMKKLKYTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL 476
P+ + E R P R ++ED L I+ GE + S
Sbjct: 288 -PS------------AVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAA 334
Query: 477 HRSPHIWDDADKFNPERWP 495
+R + DAD+ + +R P
Sbjct: 335 NRDQAQFPDADRIDVDRTP 353
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 23/130 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
L +L G E F+LL P + +L+ E P I R
Sbjct: 235 LAVLLQIGGEAVTNNSGQMFHLLLSRPELAERLRSE---------PEI--------RPRA 277
Query: 435 INESLRLYPQPPV--LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPE 492
I+E LR P L R +LED + I+ G+ +++S +R P ++ D D+ + E
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFE 337
Query: 493 RWPLDGPNPN 502
R PNP+
Sbjct: 338 R----SPNPH 343
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 126/319 (39%), Gaps = 71/319 (22%)
Query: 186 EFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIDLFGKATDRLCKKLDTAASEGEDA 245
E V G GL+ D RR +V A + + L +A + + +D A+ G+ A
Sbjct: 97 EMVKG-GLLSMDPPEHSRLRRLVVKAFTARRAES---LRPRAREIAHELVDQMAATGQPA 152
Query: 246 EMESLFSR-LTLDVIGK--AVFNYDFDSLTNDTG----IVEAVYTVLREAEDRSVAPIPV 298
++ ++F+R L + VI + V + D D T +G E ++EA +++ A
Sbjct: 153 DLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLSTAEVTAEEMQEAAEQAYA---- 208
Query: 299 WEIPIWKDISPRLKKVNAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHF 358
D+ R +K + DDL++ + D++
Sbjct: 209 ----YMGDLIDRRRK---------EPTDDLVSALVQARDQQ------------------- 236
Query: 359 LLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDR 418
D +S ++L D + +L+AG+E++ + YLL P + +L D + I
Sbjct: 237 -----DSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELI---- 287
Query: 419 FPTIGDMKKLKYTARVINESLRLYP--QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL 476
P+ + E R P R ++ED L I+ GE + S
Sbjct: 288 -PS------------AVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTGAA 334
Query: 477 HRSPHIWDDADKFNPERWP 495
+R + DAD+ + +R P
Sbjct: 335 NRDQAQFPDADRIDVDRTP 353
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 28/160 (17%)
Query: 344 HEEYMNEQ--DPSI--------LHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWT 393
H+ Y+NEQ P++ +H +G+ ++ + + ++L AG +T+ +
Sbjct: 203 HQAYVNEQCQRPNLAPGGFGACIHAFTDTGE-ITPDEAPLLVRSLLSAGLDTTVNGIGAA 261
Query: 394 FYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSL 453
Y L++ P L +L+ + PT+ E++R R +
Sbjct: 262 VYCLARFPGELQRLRSD---------PTLAR--------NAFEEAVRFESPVQTFFRTTT 304
Query: 454 EDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+ LG I GE + + + + +R P W D D ++ R
Sbjct: 305 REVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLYDITR 344
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 17/132 (12%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPT 421
+G +S + + +L AGHET+ L L VL +L+ +S
Sbjct: 235 TGSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPES-------- 286
Query: 422 IGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPH 481
T + E +R P + R + ED LG + I RG + + + +R P
Sbjct: 287 ---------TPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPA 337
Query: 482 IWDDADKFNPER 493
+ D D + R
Sbjct: 338 RFPDPDVLDVHR 349
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINE 437
+L+AGH T+ +L L + PA ++ R P I + E
Sbjct: 258 LLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED-----PGRIPAI------------VEE 300
Query: 438 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL--HRSPHIWDDADKFNPER 493
LR P P + R + + + PI D+ ++ W L +R DD D+F+P R
Sbjct: 301 VLRYRPPFPQMQRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPDRFDPSR 356
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINE 437
+L+AGH T+ +L L + PA ++ R P I + E
Sbjct: 238 LLLAGHITTTVLLGNIVRTLDEHPAHWDAAAED-----PGRIPAI------------VEE 280
Query: 438 SLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNL--HRSPHIWDDADKFNPER 493
LR P P + R + + + PI D+ ++ W L +R DD D+F+P R
Sbjct: 281 VLRYRPPFPQMQRTTTKATEVAGVPIP--ADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 328 DPQEFRPERF 337
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 362 SGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPT 421
+GD ++ ++ L M+ AGHET+ +++ LS P ++ +L
Sbjct: 223 NGDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHP-------EQRALVLS----- 270
Query: 422 IGDMKKLKYTARVINESLRL-YPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSP 480
+ +++A V+ E+LR P VLIR + ED +G I G+ + +S L R
Sbjct: 271 ----GEAEWSA-VVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDE 325
Query: 481 HIWD-DADKFNPER 493
AD+F+ R
Sbjct: 326 RAHGPTADRFDLTR 339
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 405 SKLQDEVDSIL---GDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL--- 458
++L +E+ + GD T+ ++++ T V+ ESLR+ P P ++ + +
Sbjct: 301 TQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESH 360
Query: 459 -GKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDG 498
+ +K+GE +F + P ++D +++ P+R+ DG
Sbjct: 361 DATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDG 401
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 320 DPQEFRPERF 329
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 320 DPQEFRPERF 329
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 260 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 319
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 320 DPQEFRPERF 329
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 17/117 (14%)
Query: 377 TMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVIN 436
++L AG +T+ + Y L++ P ++L+ + P++
Sbjct: 247 SLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD---------PSLAR--------NAFE 289
Query: 437 ESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
E++R R + D L I GE + + + + +R P WDD D+++ R
Sbjct: 290 EAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR 346
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 328 DPQEFRPERF 337
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 425 MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWD 484
+++ Y + E R YP P ++ R+ +D G + + ++ + W
Sbjct: 268 VQQPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWA 327
Query: 485 DADKFNPERW 494
D +F PER+
Sbjct: 328 DPQEFRPERF 337
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 375 LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARV 434
+M ++I G+ET+ ++ ++ + P D +D L +R +
Sbjct: 182 IMLLIIGGNETTTNLIGNMIRVIDENP-------DIIDDALKNR-------------SGF 221
Query: 435 INESLRLYPQPPVLIRR-SLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+ E+LR Y L R + ED + IK+G+ + + + + +R +D+ D F R
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 360 LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL---G 416
L++ DD+ + + +L A + W+ + + + P + +EV L G
Sbjct: 250 LSTFDDLEKAKTH---LVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306
Query: 417 DRFPTIGD--------MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL----GKYPIK 464
+ G+ + L +I ESLRL + IR + ED L G Y I+
Sbjct: 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIR 365
Query: 465 RGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + I + +H P I+ D F +R+
Sbjct: 366 KDDIIALYPQLMHLDPEIYPDPLTFKYDRY 395
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 360 LASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL---G 416
L++ DD+ + + +L A + W+ + + + P + +EV L G
Sbjct: 250 LSTFDDLEKAKTH---LVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAG 306
Query: 417 DRFPTIGD--------MKKLKYTARVINESLRLYPQPPVLIRRSLEDDVL----GKYPIK 464
+ G+ + L +I ESLRL + IR + ED L G Y I+
Sbjct: 307 QKVSLEGNPICLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIR 365
Query: 465 RGEDIFISVWNLHRSPHIWDDADKFNPERW 494
+ + I + +H P I+ D F +R+
Sbjct: 366 KDDIIALYPQLMHLDPEIYPDPLTFKYDRY 395
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L+ DD +S+ +L + +L+AG ETS +++ YL
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYL 256
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 257 LLTHPDQLALVRRDPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 299
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 300 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 29/110 (26%)
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA----SGDDVSSKQ 370
NAA+ ++ L DL+ E E D ++L LLA GD +S ++
Sbjct: 181 NAAMGKLHGYLSDLL---------------ERKRTEPDDALLSSLLAVSDMDGDRLSQEE 225
Query: 371 LRDDLMTMLIAGHETSA--------AVLTW--TFYLLSKEPAVLSKLQDE 410
L M +LIAGHET+ A+LT LL+++P+++S +E
Sbjct: 226 LVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEE 275
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 29/110 (26%)
Query: 315 NAALKLINDTLDDLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLA----SGDDVSSKQ 370
NAA+ ++ L DL+ E E D ++L LLA GD +S ++
Sbjct: 181 NAAMGKLHGYLSDLL---------------ERKRTEPDDALLSSLLAVSDEDGDRLSQEE 225
Query: 371 LRDDLMTMLIAGHETSA--------AVLTW--TFYLLSKEPAVLSKLQDE 410
L M +LIAGHET+ A+LT LL+++P+++S +E
Sbjct: 226 LVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEE 275
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L++ DD +S+ +L + +L+AG E S +++ YL
Sbjct: 196 LDLVERRRTEPGDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 255
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 256 LLTHPDQLALVRADPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 298
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 299 EIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFDVTR 335
>pdb|4APY|A Chain A, Ethylene Glycol-bound Form Of P450 Cyp125a3 From
Mycobacterium Smegmatis
Length = 433
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 28/143 (19%)
Query: 365 DVSSKQLRDD-----LMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRF 419
D+ ++L DD ++ + +AG+ET+ +T ++ P D+ + +R
Sbjct: 230 DIDGEKLSDDEFGFFVVMLAVAGNETTRNSITHGMIAFAQNP-------DQWELYKKERP 282
Query: 420 PTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRS 479
T D E +R R +LED LG IK+G+ + +S + +
Sbjct: 283 ETAAD------------EIVRWATPVSAFQRTALEDVELGGVQIKKGQRVVMSYRSANFD 330
Query: 480 PHIWDDADKFNPERWPLDGPNPN 502
+++D FN R PNP+
Sbjct: 331 EEVFEDPHTFNILR----SPNPH 349
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L+ DD +S+ +L + +L+AG E+S +++ YL
Sbjct: 196 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYL 255
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 256 LLTHPDQLALVRRDPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 298
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 299 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 335
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 62/157 (39%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L+ DD +S+ +L + +L+AG E+S +++ YL
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYL 256
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 257 LLTHPDQLALVRRDPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 299
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 300 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 378 MLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINE 437
+L AGHET+A +++ L P L+ ++ T + E
Sbjct: 242 LLTAGHETTANMISLGVVGLLSHPEQLTVVK-----------------ANPGRTPMAVEE 284
Query: 438 SLRLYP-QPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
LR + V R + ED +G IK GE + +S+ + + P ++ D + ER
Sbjct: 285 LLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
>pdb|3NYL|A Chain A, The X-Ray Structure Of An Antiparallel Dimer Of The Human
Amyloid Precursor Protein E2 Domain
Length = 210
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL 415
D + Q+R +MT L +E + + LL PAV ++QDEVD +L
Sbjct: 159 DPKKAAQIRSQVMTHLRVIYER----MNQSLSLLYNVPAVAEEIQDEVDELL 206
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQ 408
+++ LA+G+ + ++L M +LIAGHET+A++ + + L P + L+
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR 271
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQ 408
+++ LA+G+ + ++L M +LIAGHET+A++ + + L P + L+
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR 271
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQ 408
+++ LA+G+ + ++L M +LIAGHET+A++ + + L P + L+
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR 271
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 296 IPVWEIPIWKDISPRLKK---VNAALKLINDT---LDDLIAICKRMVDEEELQFHEEYMN 349
+P + ++D S RL + +AL ND LD LI QF E
Sbjct: 165 VPYADHEFFQDASKRLVQSTDAQSALTARNDLAGYLDGLIT-----------QFQTEPGA 213
Query: 350 EQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQ 408
+++ LA+G+ + ++L M +LIAGHET+A++ + + L P + L+
Sbjct: 214 GLVGALVADQLANGE-IDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR 271
>pdb|3UMH|A Chain A, X-Ray Structure Of The E2 Domain Of The Human Amyloid
Precursor Protein (App) In Complex With Cadmium
pdb|3UMI|A Chain A, X-Ray Structure Of The E2 Domain Of The Human Amyloid
Precursor Protein (App) In Complex With Zinc
pdb|3UMK|A Chain A, X-Ray Structure Of The E2 Domain Of The Human Amyloid
Precursor Protein (App) In Complex With Copper
Length = 211
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL 415
D + Q+R +MT L +E + + LL PAV ++QDEVD +L
Sbjct: 151 DPKKAAQIRSQVMTHLRVIYER----MNQSLSLLYNVPAVAEEIQDEVDELL 198
>pdb|1TKN|A Chain A, Solution Structure Of Cappd, An Independently Folded
Extracellular Domain Of Human Amyloid-Beta Precursor
Protein
Length = 110
Score = 29.6 bits (65), Expect = 4.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 364 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPAVLSKLQDEVDSIL 415
D + Q+R +MT L +E + + LL PAV ++QDEVD +L
Sbjct: 60 DPKKAAQIRSQVMTHLRVIYER----MNQSLSLLYNVPAVAEEIQDEVDELL 107
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L+ DD +S+ +L + +L+AG E S +++ YL
Sbjct: 196 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 255
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 256 LLTHPDQLALVRRDPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 298
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 299 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 335
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 61/157 (38%), Gaps = 21/157 (13%)
Query: 341 LQFHEEYMNEQDPSILHFLLASGDD----VSSKQLRDDLMTMLIAGHETSAAVLTWTFYL 396
L E E +L L+ DD +S+ +L + +L+AG E S +++ YL
Sbjct: 197 LDLVERRRTEPGDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYL 256
Query: 397 LSKEPAVLSKLQDEVDSILGDRFPTIGDMKKLKYTARVINESLRLYPQPPVLIRRSLEDD 456
L P L+ ++ + ++ + E LR P R + E+
Sbjct: 257 LLTHPDQLALVRRDPSAL-----------------PNAVEEILRYIAPPETTTRFAAEEV 299
Query: 457 VLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPER 493
+G I + + ++ +R P + D +F+ R
Sbjct: 300 EIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 424 DMKKLKYTARVINESLRLYPQPPVLIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIW 483
D + K + + E+LR P IR + E + I GE + + + + +R ++
Sbjct: 233 DYVREKGALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVF 292
Query: 484 DDADKFNPERWPLDGPNPN 502
D D F P+R PNP+
Sbjct: 293 KDPDSFIPDR----TPNPH 307
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 448 LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPN 502
L R +LED + I GE +++S +R P ++ D D+ + +R PNP+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DPNPH 346
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 448 LIRRSLEDDVLGKYPIKRGEDIFISVWNLHRSPHIWDDADKFNPERWPLDGPNPN 502
L R +LED + I GE +++S +R P ++ D D+ + +R PNP+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR----DPNPH 346
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,553,132
Number of Sequences: 62578
Number of extensions: 666373
Number of successful extensions: 1912
Number of sequences better than 100.0: 173
Number of HSP's better than 100.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 181
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)