Query 010421
Match_columns 511
No_of_seqs 330 out of 3450
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 06:26:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwf_A Cyclohexanone monooxyge 100.0 3.9E-52 1.3E-56 435.5 26.1 457 4-510 8-530 (540)
2 4ap3_A Steroid monooxygenase; 100.0 2.6E-52 9E-57 437.7 21.0 388 4-435 21-467 (549)
3 3uox_A Otemo; baeyer-villiger 100.0 5.3E-52 1.8E-56 435.0 21.0 394 4-435 9-462 (545)
4 2xve_A Flavin-containing monoo 100.0 1.5E-49 5.2E-54 410.1 34.7 359 5-491 3-390 (464)
5 1w4x_A Phenylacetone monooxyge 100.0 1.2E-48 4.2E-53 411.4 29.2 430 4-479 16-505 (542)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 1.3E-45 4.5E-50 380.0 32.5 356 2-488 4-410 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 5.9E-37 2E-41 305.9 25.8 341 4-438 3-351 (357)
8 4b63_A L-ornithine N5 monooxyg 100.0 2.9E-34 9.8E-39 298.5 24.6 328 4-374 39-412 (501)
9 3d1c_A Flavin-containing putat 100.0 2.3E-32 7.9E-37 274.2 25.2 320 4-448 4-348 (369)
10 3lzw_A Ferredoxin--NADP reduct 100.0 2.2E-30 7.6E-35 255.7 20.3 289 4-435 7-311 (332)
11 3fbs_A Oxidoreductase; structu 100.0 4.6E-30 1.6E-34 249.3 21.4 282 4-435 2-288 (297)
12 2zbw_A Thioredoxin reductase; 100.0 1.9E-30 6.5E-35 256.8 18.7 295 2-435 3-313 (335)
13 3itj_A Thioredoxin reductase 1 100.0 5.1E-30 1.7E-34 253.8 19.4 291 3-435 21-331 (338)
14 3f8d_A Thioredoxin reductase ( 100.0 1.5E-29 5.2E-34 248.6 22.5 282 4-435 15-313 (323)
15 2q7v_A Thioredoxin reductase; 100.0 2.9E-29 9.8E-34 247.3 24.2 287 4-436 8-309 (325)
16 3ab1_A Ferredoxin--NADP reduct 100.0 1.5E-29 5.2E-34 252.9 21.9 297 2-436 12-325 (360)
17 2a87_A TRXR, TR, thioredoxin r 100.0 5.4E-29 1.8E-33 246.4 21.3 285 2-435 12-312 (335)
18 2q0l_A TRXR, thioredoxin reduc 100.0 9.9E-29 3.4E-33 241.8 21.3 287 5-435 2-305 (311)
19 3r9u_A Thioredoxin reductase; 100.0 2.3E-28 7.9E-33 239.4 22.0 290 3-435 3-308 (315)
20 1fl2_A Alkyl hydroperoxide red 100.0 2.1E-28 7.3E-33 239.3 21.1 284 5-435 2-301 (310)
21 3cty_A Thioredoxin reductase; 100.0 3.4E-28 1.1E-32 239.0 20.5 285 1-435 13-312 (319)
22 1trb_A Thioredoxin reductase; 100.0 2.7E-28 9.1E-33 239.7 18.8 288 2-435 3-310 (320)
23 1vdc_A NTR, NADPH dependent th 100.0 4.7E-28 1.6E-32 239.3 19.6 285 4-434 8-318 (333)
24 1hyu_A AHPF, alkyl hydroperoxi 99.9 2.7E-26 9.2E-31 239.8 25.0 285 3-434 211-511 (521)
25 3s5w_A L-ornithine 5-monooxyge 99.9 6.1E-27 2.1E-31 242.1 20.0 207 5-242 31-268 (463)
26 3iwa_A FAD-dependent pyridine 99.9 4.2E-27 1.4E-31 243.7 17.2 307 1-438 1-330 (472)
27 4eqs_A Coenzyme A disulfide re 99.9 5.6E-27 1.9E-31 239.7 17.8 296 5-438 1-312 (437)
28 3ics_A Coenzyme A-disulfide re 99.9 4.3E-27 1.5E-31 250.2 17.3 299 3-436 35-352 (588)
29 3l8k_A Dihydrolipoyl dehydroge 99.9 6.2E-27 2.1E-31 241.8 17.3 301 1-437 1-333 (466)
30 3lxd_A FAD-dependent pyridine 99.9 8.4E-27 2.9E-31 237.4 16.3 292 3-438 8-322 (415)
31 3klj_A NAD(FAD)-dependent dehy 99.9 4.9E-28 1.7E-32 243.1 7.0 280 3-438 8-295 (385)
32 4a5l_A Thioredoxin reductase; 99.9 1.7E-26 5.8E-31 226.2 17.6 184 1-236 1-186 (314)
33 4fk1_A Putative thioredoxin re 99.9 3.7E-26 1.3E-30 222.8 19.6 281 3-434 5-295 (304)
34 3ef6_A Toluene 1,2-dioxygenase 99.9 1.3E-27 4.6E-32 242.7 9.6 289 5-438 3-310 (410)
35 3oc4_A Oxidoreductase, pyridin 99.9 2.2E-26 7.5E-31 236.9 18.2 291 5-437 3-314 (452)
36 3ntd_A FAD-dependent pyridine 99.9 1.2E-26 4.3E-31 245.8 16.8 298 5-438 2-339 (565)
37 1mo9_A ORF3; nucleotide bindin 99.9 2.8E-26 9.5E-31 240.1 18.3 305 2-437 41-378 (523)
38 2wpf_A Trypanothione reductase 99.9 2.4E-26 8.3E-31 238.8 17.6 309 1-437 4-355 (495)
39 1ojt_A Surface protein; redox- 99.9 1.2E-25 4E-30 233.2 22.7 309 1-437 3-349 (482)
40 4gcm_A TRXR, thioredoxin reduc 99.9 6.5E-26 2.2E-30 221.9 19.5 175 1-236 2-179 (312)
41 3fg2_P Putative rubredoxin red 99.9 3.6E-27 1.2E-31 239.2 10.6 289 5-438 2-311 (404)
42 3kd9_A Coenzyme A disulfide re 99.9 1.8E-26 6.3E-31 237.3 15.3 294 1-438 1-316 (449)
43 2qae_A Lipoamide, dihydrolipoy 99.9 3E-26 1E-30 237.0 16.7 308 4-437 2-340 (468)
44 2bc0_A NADH oxidase; flavoprot 99.9 1.2E-26 4.3E-31 241.0 13.7 295 4-438 35-362 (490)
45 1xhc_A NADH oxidase /nitrite r 99.9 4.5E-27 1.5E-31 235.0 9.9 282 4-437 8-297 (367)
46 3urh_A Dihydrolipoyl dehydroge 99.9 2.3E-26 7.8E-31 239.2 15.5 309 3-438 24-364 (491)
47 2r9z_A Glutathione amide reduc 99.9 7.3E-26 2.5E-30 233.4 18.1 302 1-437 1-327 (463)
48 2gqw_A Ferredoxin reductase; f 99.9 6.4E-27 2.2E-31 237.5 9.5 287 3-438 6-309 (408)
49 2hqm_A GR, grase, glutathione 99.9 5.1E-26 1.8E-30 235.7 16.4 305 3-437 10-347 (479)
50 2v3a_A Rubredoxin reductase; a 99.9 4.9E-26 1.7E-30 229.4 15.7 291 1-437 1-306 (384)
51 1ges_A Glutathione reductase; 99.9 3.3E-26 1.1E-30 235.2 14.8 302 1-437 1-328 (450)
52 1dxl_A Dihydrolipoamide dehydr 99.9 5E-26 1.7E-30 235.6 16.1 310 3-437 5-342 (470)
53 4dna_A Probable glutathione re 99.9 5.6E-26 1.9E-30 234.6 16.0 303 1-437 1-331 (463)
54 1ebd_A E3BD, dihydrolipoamide 99.9 6.8E-26 2.3E-30 233.5 16.4 304 4-437 3-333 (455)
55 1xdi_A RV3303C-LPDA; reductase 99.9 1.1E-25 3.6E-30 234.6 17.9 314 4-437 2-342 (499)
56 1zmd_A Dihydrolipoyl dehydroge 99.9 7.8E-26 2.7E-30 234.3 16.2 308 3-437 5-345 (474)
57 1onf_A GR, grase, glutathione 99.9 7.7E-26 2.6E-30 235.5 16.1 300 4-437 2-371 (500)
58 1zk7_A HGII, reductase, mercur 99.9 4.1E-25 1.4E-29 228.4 20.5 309 1-437 1-334 (467)
59 2a8x_A Dihydrolipoyl dehydroge 99.9 4.7E-26 1.6E-30 235.3 13.4 303 4-436 3-333 (464)
60 3o0h_A Glutathione reductase; 99.9 8.4E-26 2.9E-30 234.5 15.1 300 4-437 26-351 (484)
61 1q1r_A Putidaredoxin reductase 99.9 4.4E-26 1.5E-30 232.8 12.4 295 1-438 1-320 (431)
62 1v59_A Dihydrolipoamide dehydr 99.9 6.5E-26 2.2E-30 235.2 13.4 308 1-437 2-350 (478)
63 2cdu_A NADPH oxidase; flavoenz 99.9 3.3E-25 1.1E-29 228.2 17.8 297 5-437 1-317 (452)
64 3dk9_A Grase, GR, glutathione 99.9 2.3E-25 7.7E-30 231.0 15.6 301 4-437 20-356 (478)
65 1nhp_A NADH peroxidase; oxidor 99.9 5.2E-25 1.8E-29 226.3 17.2 295 5-437 1-316 (447)
66 3ic9_A Dihydrolipoamide dehydr 99.9 6.9E-26 2.4E-30 235.3 10.7 304 4-436 8-337 (492)
67 1fec_A Trypanothione reductase 99.9 7.6E-25 2.6E-29 227.3 18.3 307 3-437 2-351 (490)
68 2eq6_A Pyruvate dehydrogenase 99.9 8.4E-25 2.9E-29 225.6 18.5 299 4-437 6-334 (464)
69 2yqu_A 2-oxoglutarate dehydrog 99.9 1.9E-25 6.5E-30 230.2 13.5 303 5-437 2-327 (455)
70 1lvl_A Dihydrolipoamide dehydr 99.9 4.7E-25 1.6E-29 227.2 15.7 298 4-437 5-330 (458)
71 3dgz_A Thioredoxin reductase 2 99.9 2.2E-24 7.4E-29 224.1 19.7 307 3-437 5-352 (488)
72 3lad_A Dihydrolipoamide dehydr 99.9 2.2E-24 7.5E-29 223.6 19.3 309 3-438 2-344 (476)
73 3qfa_A Thioredoxin reductase 1 99.9 4.9E-24 1.7E-28 222.7 21.7 307 3-437 31-380 (519)
74 3cgb_A Pyridine nucleotide-dis 99.9 7.8E-25 2.7E-29 226.9 15.3 296 5-437 37-353 (480)
75 3h8l_A NADH oxidase; membrane 99.9 6.2E-25 2.1E-29 223.3 14.2 297 5-438 2-335 (409)
76 3dgh_A TRXR-1, thioredoxin red 99.9 3.1E-24 1.1E-28 222.7 17.2 305 3-437 8-352 (483)
77 2vdc_G Glutamate synthase [NAD 99.9 5.2E-25 1.8E-29 225.5 10.9 167 3-237 121-300 (456)
78 2x8g_A Thioredoxin glutathione 99.9 7.2E-24 2.5E-28 225.7 18.8 311 3-437 106-459 (598)
79 3k30_A Histamine dehydrogenase 99.9 6.4E-25 2.2E-29 237.1 7.7 268 3-439 390-675 (690)
80 1lqt_A FPRA; NADP+ derivative, 99.9 6.6E-24 2.3E-28 217.6 12.1 171 3-236 2-202 (456)
81 4g6h_A Rotenone-insensitive NA 99.9 4.2E-24 1.4E-28 221.6 10.3 307 4-441 42-403 (502)
82 3sx6_A Sulfide-quinone reducta 99.9 5.4E-24 1.9E-28 218.0 10.5 299 1-435 1-340 (437)
83 4b1b_A TRXR, thioredoxin reduc 99.9 7.1E-23 2.4E-27 213.0 16.9 307 5-437 43-384 (542)
84 1m6i_A Programmed cell death p 99.9 1.2E-23 4.1E-28 218.4 8.1 314 1-438 8-353 (493)
85 1o94_A Tmadh, trimethylamine d 99.9 1.3E-23 4.4E-28 227.8 7.3 277 4-438 389-699 (729)
86 1ps9_A 2,4-dienoyl-COA reducta 99.9 4.9E-23 1.7E-27 221.8 11.5 289 4-434 373-671 (671)
87 1cjc_A Protein (adrenodoxin re 99.9 1.1E-22 3.9E-27 208.7 12.7 168 3-237 5-201 (460)
88 2gag_A Heterotetrameric sarcos 99.9 3E-22 1E-26 222.8 15.6 293 4-435 128-440 (965)
89 3h28_A Sulfide-quinone reducta 99.8 3.8E-22 1.3E-26 203.9 5.5 292 4-434 2-328 (430)
90 1gte_A Dihydropyrimidine dehyd 99.8 2.8E-21 9.7E-26 216.4 11.0 172 4-240 187-371 (1025)
91 3hyw_A Sulfide-quinone reducta 99.8 3.7E-21 1.3E-25 196.4 5.9 103 329-435 209-329 (430)
92 1y56_A Hypothetical protein PH 99.8 1.4E-20 4.7E-25 195.3 9.6 259 4-437 108-375 (493)
93 3vrd_B FCCB subunit, flavocyto 99.8 9.8E-19 3.4E-23 177.0 18.1 100 329-435 211-320 (401)
94 2gqf_A Hypothetical protein HI 99.3 5.1E-13 1.7E-17 134.5 3.7 136 1-156 1-168 (401)
95 2ywl_A Thioredoxin reductase r 99.2 1.1E-10 3.9E-15 103.6 10.4 106 5-155 2-109 (180)
96 3v76_A Flavoprotein; structura 99.2 1.5E-10 5E-15 116.9 12.0 133 3-160 26-190 (417)
97 3cgv_A Geranylgeranyl reductas 99.1 1.6E-10 5.4E-15 116.2 10.6 133 3-156 3-162 (397)
98 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 1E-10 3.6E-15 115.2 8.3 128 5-155 2-164 (342)
99 3nix_A Flavoprotein/dehydrogen 99.1 6.3E-10 2.1E-14 112.8 13.5 137 1-156 1-166 (421)
100 3oz2_A Digeranylgeranylglycero 99.1 2.2E-10 7.6E-15 114.9 9.9 133 4-156 4-162 (397)
101 2ywl_A Thioredoxin reductase r 99.1 2E-10 6.7E-15 102.1 8.2 97 330-436 66-168 (180)
102 1yvv_A Amine oxidase, flavin-c 99.1 6.1E-10 2.1E-14 109.2 12.6 127 4-156 2-162 (336)
103 3fpz_A Thiazole biosynthetic e 99.1 3.9E-12 1.3E-16 124.6 -3.7 148 4-235 65-216 (326)
104 2cul_A Glucose-inhibited divis 99.0 8.3E-10 2.9E-14 102.3 10.9 121 2-156 1-125 (232)
105 2bry_A NEDD9 interacting prote 99.0 4.3E-10 1.5E-14 116.4 8.8 136 3-156 91-230 (497)
106 3c96_A Flavin-containing monoo 99.0 2E-09 7E-14 108.7 13.0 137 1-156 1-169 (410)
107 2xdo_A TETX2 protein; tetracyc 99.0 1E-09 3.6E-14 110.4 10.6 128 3-156 25-182 (398)
108 2qa1_A PGAE, polyketide oxygen 99.0 2.1E-09 7.2E-14 111.3 12.1 135 2-156 9-165 (500)
109 3atr_A Conserved archaeal prot 99.0 1.1E-09 3.7E-14 112.2 9.6 135 2-156 4-162 (453)
110 3nlc_A Uncharacterized protein 99.0 1.7E-09 5.9E-14 112.2 10.9 131 4-156 107-277 (549)
111 3ihg_A RDME; flavoenzyme, anth 99.0 6.2E-09 2.1E-13 109.0 14.8 136 1-156 1-183 (535)
112 3rp8_A Flavoprotein monooxygen 99.0 9.6E-10 3.3E-14 111.0 8.3 129 3-156 22-181 (407)
113 3fmw_A Oxygenase; mithramycin, 99.0 1.5E-09 5.3E-14 113.9 10.0 132 4-156 49-207 (570)
114 3dme_A Conserved exported prot 98.9 3E-09 1E-13 105.6 11.2 62 75-156 148-209 (369)
115 2qa2_A CABE, polyketide oxygen 98.9 3.7E-09 1.3E-13 109.4 12.3 134 3-156 11-166 (499)
116 2x3n_A Probable FAD-dependent 98.9 1.6E-09 5.5E-14 109.0 9.3 130 4-156 6-166 (399)
117 2r0c_A REBC; flavin adenine di 98.9 1.1E-08 3.6E-13 107.3 15.5 131 4-156 26-196 (549)
118 1rp0_A ARA6, thiazole biosynth 98.9 8.7E-09 3E-13 98.5 12.9 133 4-155 39-190 (284)
119 3ces_A MNMG, tRNA uridine 5-ca 98.9 2E-09 6.9E-14 112.7 9.0 168 3-233 27-221 (651)
120 2vou_A 2,6-dihydroxypyridine h 98.9 4.6E-09 1.6E-13 105.6 11.2 128 3-156 4-153 (397)
121 3e1t_A Halogenase; flavoprotei 98.9 7.8E-09 2.7E-13 107.5 13.3 134 4-156 7-172 (512)
122 3ps9_A TRNA 5-methylaminomethy 98.9 9.9E-09 3.4E-13 110.5 14.3 59 75-156 415-473 (676)
123 3alj_A 2-methyl-3-hydroxypyrid 98.9 2.9E-09 9.8E-14 106.4 9.4 126 4-156 11-160 (379)
124 3i3l_A Alkylhalidase CMLS; fla 98.9 8.4E-09 2.9E-13 108.6 13.3 134 3-156 22-188 (591)
125 1k0i_A P-hydroxybenzoate hydro 98.9 2.2E-09 7.4E-14 107.9 8.1 133 4-156 2-163 (394)
126 2i0z_A NAD(FAD)-utilizing dehy 98.9 3.2E-09 1.1E-13 108.4 8.7 130 4-156 26-191 (447)
127 3dje_A Fructosyl amine: oxygen 98.9 9.5E-09 3.3E-13 104.7 11.8 58 76-156 160-221 (438)
128 1y56_B Sarcosine oxidase; dehy 98.9 1.5E-08 5E-13 101.2 12.6 58 75-156 147-205 (382)
129 2gmh_A Electron transfer flavo 98.8 1.1E-08 3.8E-13 107.8 12.1 136 4-156 35-217 (584)
130 3nyc_A D-arginine dehydrogenas 98.8 4.4E-09 1.5E-13 104.9 8.4 58 75-156 152-209 (381)
131 2uzz_A N-methyl-L-tryptophan o 98.8 1.2E-08 4E-13 101.5 11.0 57 76-156 148-204 (372)
132 1ryi_A Glycine oxidase; flavop 98.8 9.3E-09 3.2E-13 102.7 10.1 59 74-156 161-219 (382)
133 1y0p_A Fumarate reductase flav 98.8 2.6E-08 8.9E-13 105.0 13.9 134 4-156 126-317 (571)
134 3da1_A Glycerol-3-phosphate de 98.8 2.8E-08 9.6E-13 104.3 13.5 64 76-156 169-232 (561)
135 1qo8_A Flavocytochrome C3 fuma 98.8 3.3E-08 1.1E-12 104.1 13.3 135 4-156 121-312 (566)
136 2oln_A NIKD protein; flavoprot 98.8 1.9E-08 6.5E-13 101.0 11.0 37 1-37 1-39 (397)
137 2zxi_A TRNA uridine 5-carboxym 98.8 8.8E-09 3E-13 107.4 8.0 166 4-233 27-220 (637)
138 2gf3_A MSOX, monomeric sarcosi 98.7 3.2E-08 1.1E-12 99.0 11.1 56 76-155 149-204 (389)
139 3pvc_A TRNA 5-methylaminomethy 98.7 1E-07 3.5E-12 102.7 15.7 60 75-156 410-469 (689)
140 2dkh_A 3-hydroxybenzoate hydro 98.7 7.2E-08 2.5E-12 102.8 13.2 141 4-156 32-211 (639)
141 3cp8_A TRNA uridine 5-carboxym 98.7 2.7E-08 9.1E-13 104.2 9.1 168 3-233 20-215 (641)
142 4hb9_A Similarities with proba 98.7 3.5E-08 1.2E-12 99.3 9.8 33 5-37 2-36 (412)
143 2cul_A Glucose-inhibited divis 98.7 4E-08 1.4E-12 90.9 8.6 33 198-235 4-36 (232)
144 2qcu_A Aerobic glycerol-3-phos 98.7 1.2E-07 4E-12 98.3 13.0 64 75-156 147-210 (501)
145 1d4d_A Flavocytochrome C fumar 98.7 2.5E-07 8.4E-12 97.4 15.0 134 4-156 126-317 (572)
146 3jsk_A Cypbp37 protein; octame 98.6 1.7E-08 5.9E-13 97.8 5.3 102 4-108 79-190 (344)
147 2gag_B Heterotetrameric sarcos 98.6 1.8E-07 6.2E-12 94.0 12.1 59 75-156 172-230 (405)
148 3kkj_A Amine oxidase, flavin-c 98.6 3E-08 1E-12 93.7 5.7 45 4-48 2-48 (336)
149 3i6d_A Protoporphyrinogen oxid 98.6 1E-07 3.4E-12 97.9 9.5 41 1-41 1-50 (470)
150 4at0_A 3-ketosteroid-delta4-5a 98.6 4.6E-07 1.6E-11 94.0 14.1 37 4-40 41-79 (510)
151 1pj5_A N,N-dimethylglycine oxi 98.6 1.5E-07 5.2E-12 103.6 11.0 36 1-36 1-39 (830)
152 3k7m_X 6-hydroxy-L-nicotine ox 98.6 2.4E-07 8.2E-12 94.0 11.7 38 5-42 2-41 (431)
153 3nrn_A Uncharacterized protein 98.6 8.1E-08 2.8E-12 97.2 8.0 39 5-43 1-41 (421)
154 1pn0_A Phenol 2-monooxygenase; 98.5 6.7E-07 2.3E-11 95.6 14.1 143 4-156 8-230 (665)
155 3ka7_A Oxidoreductase; structu 98.5 1.7E-07 5.8E-12 94.9 8.8 38 5-42 1-40 (425)
156 2yqu_A 2-oxoglutarate dehydrog 98.5 3.3E-07 1.1E-11 93.8 10.2 95 4-155 167-263 (455)
157 3c4n_A Uncharacterized protein 98.5 1.4E-07 4.9E-12 94.9 7.3 34 4-37 36-73 (405)
158 2aqj_A Tryptophan halogenase, 98.5 1.9E-07 6.3E-12 97.7 8.2 59 75-156 163-222 (538)
159 2gjc_A Thiazole biosynthetic e 98.5 4E-07 1.4E-11 87.7 9.6 102 4-108 65-176 (326)
160 2rgh_A Alpha-glycerophosphate 98.5 9.9E-07 3.4E-11 92.7 13.0 63 77-156 188-250 (571)
161 1v59_A Dihydrolipoamide dehydr 98.5 1.8E-06 6.3E-11 88.8 14.8 106 4-162 183-290 (478)
162 2e1m_A L-glutamate oxidase; L- 98.4 1.7E-07 5.9E-12 92.5 6.0 91 3-101 43-136 (376)
163 2wdq_A Succinate dehydrogenase 98.4 2.7E-06 9.3E-11 89.5 15.4 64 76-156 142-206 (588)
164 1onf_A GR, grase, glutathione 98.4 2.9E-06 1E-10 87.7 15.5 100 4-162 176-278 (500)
165 1kf6_A Fumarate reductase flav 98.4 1.3E-06 4.3E-11 92.3 12.8 63 76-156 133-197 (602)
166 2eq6_A Pyruvate dehydrogenase 98.4 1.4E-06 4.9E-11 89.2 12.8 104 4-162 169-274 (464)
167 3s5w_A L-ornithine 5-monooxyge 98.4 9.4E-07 3.2E-11 90.5 11.3 170 4-206 227-418 (463)
168 2v3a_A Rubredoxin reductase; a 98.4 9.8E-07 3.3E-11 88.1 11.2 96 4-155 145-242 (384)
169 2e5v_A L-aspartate oxidase; ar 98.4 7.8E-07 2.7E-11 91.3 10.6 34 6-40 1-36 (472)
170 2h88_A Succinate dehydrogenase 98.4 1.9E-06 6.4E-11 91.0 12.8 63 76-156 154-217 (621)
171 1chu_A Protein (L-aspartate ox 98.4 7.8E-07 2.7E-11 92.8 9.6 36 4-39 8-44 (540)
172 2pyx_A Tryptophan halogenase; 98.4 1.4E-06 4.9E-11 90.7 11.2 60 74-156 172-233 (526)
173 1ges_A Glutathione reductase; 98.4 1.4E-06 4.9E-11 88.8 10.8 100 4-162 167-268 (450)
174 3c4a_A Probable tryptophan hyd 98.4 1.3E-07 4.4E-12 94.4 2.9 118 5-156 1-143 (381)
175 1ebd_A E3BD, dihydrolipoamide 98.3 2.3E-06 8E-11 87.4 11.7 102 4-162 170-273 (455)
176 3urh_A Dihydrolipoyl dehydroge 98.3 3.3E-06 1.1E-10 87.2 12.8 104 4-162 198-303 (491)
177 2e4g_A Tryptophan halogenase; 98.3 1.4E-06 4.7E-11 91.3 9.9 60 74-156 191-252 (550)
178 1zmd_A Dihydrolipoyl dehydroge 98.3 4.3E-06 1.5E-10 85.9 12.8 102 4-155 178-281 (474)
179 2bs2_A Quinol-fumarate reducta 98.3 5.4E-06 1.8E-10 88.2 13.3 62 76-155 157-219 (660)
180 1nhp_A NADH peroxidase; oxidor 98.3 2.4E-06 8.3E-11 87.1 10.3 102 3-164 148-251 (447)
181 3axb_A Putative oxidoreductase 98.3 2.2E-06 7.4E-11 87.4 9.8 35 3-37 22-59 (448)
182 1dxl_A Dihydrolipoamide dehydr 98.3 3.1E-06 1.1E-10 86.9 11.0 104 4-162 177-282 (470)
183 3lxd_A FAD-dependent pyridine 98.3 4.5E-06 1.5E-10 84.2 11.7 99 4-161 152-253 (415)
184 4gut_A Lysine-specific histone 98.3 2.5E-06 8.6E-11 92.2 10.2 36 4-39 336-373 (776)
185 3hyw_A Sulfide-quinone reducta 98.2 2.1E-06 7E-11 87.1 9.1 106 198-372 3-110 (430)
186 2weu_A Tryptophan 5-halogenase 98.2 2.1E-06 7.1E-11 89.2 9.3 60 74-156 170-230 (511)
187 1fec_A Trypanothione reductase 98.2 3.8E-06 1.3E-10 86.6 10.6 100 4-162 187-291 (490)
188 3ef6_A Toluene 1,2-dioxygenase 98.2 3.4E-06 1.2E-10 84.9 9.8 96 4-155 143-240 (410)
189 2wpf_A Trypanothione reductase 98.2 4.5E-06 1.5E-10 86.2 10.8 100 4-162 191-295 (495)
190 1q1r_A Putidaredoxin reductase 98.2 5.9E-06 2E-10 83.7 11.4 98 4-155 149-249 (431)
191 3ic9_A Dihydrolipoamide dehydr 98.2 8.1E-06 2.8E-10 84.2 12.6 102 4-162 174-277 (492)
192 2a8x_A Dihydrolipoyl dehydroge 98.2 6.8E-06 2.3E-10 84.1 11.9 102 4-162 171-274 (464)
193 3dgh_A TRXR-1, thioredoxin red 98.2 1.2E-05 3.9E-10 82.9 13.6 104 4-162 187-292 (483)
194 3oc4_A Oxidoreductase, pyridin 98.2 8.2E-06 2.8E-10 83.2 12.3 99 4-162 147-247 (452)
195 1ojt_A Surface protein; redox- 98.2 3.3E-06 1.1E-10 86.9 9.3 101 4-161 185-288 (482)
196 2zbw_A Thioredoxin reductase; 98.2 1.5E-05 5.1E-10 77.6 13.5 98 4-155 152-251 (335)
197 3iwa_A FAD-dependent pyridine 98.2 7E-06 2.4E-10 84.3 11.6 96 4-155 159-257 (472)
198 1trb_A Thioredoxin reductase; 98.2 8.5E-06 2.9E-10 78.8 11.7 99 4-155 145-246 (320)
199 2qae_A Lipoamide, dihydrolipoy 98.2 6.6E-06 2.2E-10 84.4 11.4 99 4-155 174-275 (468)
200 2gqw_A Ferredoxin reductase; f 98.2 6.5E-06 2.2E-10 82.8 11.0 92 4-155 145-238 (408)
201 3vrd_B FCCB subunit, flavocyto 98.2 3.1E-06 1.1E-10 84.9 8.7 109 196-374 1-111 (401)
202 3fg2_P Putative rubredoxin red 98.2 4.6E-06 1.6E-10 83.8 9.9 97 4-155 142-240 (404)
203 3lad_A Dihydrolipoamide dehydr 98.2 1.7E-05 5.9E-10 81.4 14.4 102 4-162 180-283 (476)
204 3dgz_A Thioredoxin reductase 2 98.2 1.4E-05 4.8E-10 82.3 13.7 104 4-162 185-290 (488)
205 3cgb_A Pyridine nucleotide-dis 98.2 6.3E-06 2.2E-10 84.7 11.0 95 3-155 185-281 (480)
206 1lvl_A Dihydrolipoamide dehydr 98.2 3.8E-06 1.3E-10 85.9 9.1 99 4-162 171-271 (458)
207 2b9w_A Putative aminooxidase; 98.2 1.8E-06 6.3E-11 87.2 6.5 47 2-48 4-53 (424)
208 1xdi_A RV3303C-LPDA; reductase 98.2 7.1E-06 2.4E-10 84.8 10.9 99 4-162 182-282 (499)
209 1zk7_A HGII, reductase, mercur 98.2 5.6E-06 1.9E-10 84.8 10.0 93 4-155 176-270 (467)
210 2r9z_A Glutathione amide reduc 98.2 5.9E-06 2E-10 84.6 10.1 100 4-162 166-267 (463)
211 2bc0_A NADH oxidase; flavoprot 98.2 6.9E-06 2.4E-10 84.7 10.7 99 4-162 194-294 (490)
212 3dk9_A Grase, GR, glutathione 98.1 1.2E-05 4E-10 82.7 12.2 105 4-162 187-296 (478)
213 2hqm_A GR, grase, glutathione 98.1 6.1E-06 2.1E-10 84.9 9.9 100 4-161 185-287 (479)
214 3qfa_A Thioredoxin reductase 1 98.1 3.5E-05 1.2E-09 79.9 15.7 107 4-162 210-318 (519)
215 4b1b_A TRXR, thioredoxin reduc 98.1 8E-06 2.7E-10 84.8 10.6 99 4-163 223-323 (542)
216 4eqs_A Coenzyme A disulfide re 98.1 9.2E-06 3.1E-10 82.4 10.9 95 4-162 147-243 (437)
217 2cdu_A NADPH oxidase; flavoenz 98.1 1E-05 3.5E-10 82.5 10.9 100 4-162 149-250 (452)
218 3ntd_A FAD-dependent pyridine 98.1 1E-05 3.5E-10 85.0 11.2 111 4-155 151-266 (565)
219 4dgk_A Phytoene dehydrogenase; 98.1 1.3E-06 4.3E-11 90.5 4.1 46 5-50 2-49 (501)
220 3o0h_A Glutathione reductase; 98.1 9.7E-06 3.3E-10 83.5 10.6 95 4-155 191-287 (484)
221 4gde_A UDP-galactopyranose mut 98.1 1.5E-06 5.2E-11 90.1 4.3 40 4-43 10-52 (513)
222 1v0j_A UDP-galactopyranose mut 98.1 2.2E-06 7.5E-11 85.9 5.2 43 1-43 4-49 (399)
223 2bcg_G Secretory pathway GDP d 98.1 2.5E-06 8.6E-11 87.0 5.3 42 2-43 9-52 (453)
224 1xhc_A NADH oxidase /nitrite r 98.1 6.5E-06 2.2E-10 81.5 7.7 91 5-161 144-236 (367)
225 3hdq_A UDP-galactopyranose mut 98.0 4.3E-06 1.5E-10 83.2 6.3 41 3-43 28-70 (397)
226 1sez_A Protoporphyrinogen oxid 98.0 3E-06 1E-10 87.8 5.1 49 1-49 10-60 (504)
227 1m6i_A Programmed cell death p 98.0 1.6E-05 5.6E-10 81.9 10.5 96 4-155 180-281 (493)
228 3gyx_A Adenylylsulfate reducta 98.0 1.4E-05 4.9E-10 84.9 10.1 66 76-156 165-233 (662)
229 1s3e_A Amine oxidase [flavin-c 98.0 3E-06 1E-10 88.1 4.7 43 1-43 1-45 (520)
230 3ab1_A Ferredoxin--NADP reduct 98.0 4.5E-05 1.5E-09 75.1 12.5 97 4-155 163-262 (360)
231 1mo9_A ORF3; nucleotide bindin 98.0 2.1E-05 7.3E-10 81.7 10.4 99 5-161 215-318 (523)
232 4dna_A Probable glutathione re 98.0 2.3E-05 7.9E-10 80.1 10.3 99 4-162 170-271 (463)
233 3kd9_A Coenzyme A disulfide re 98.0 2.1E-05 7.1E-10 80.1 9.6 94 4-155 148-243 (449)
234 1rsg_A FMS1 protein; FAD bindi 98.0 3.7E-06 1.3E-10 87.4 4.1 40 4-43 8-50 (516)
235 3sx6_A Sulfide-quinone reducta 97.9 1.5E-05 5.3E-10 80.8 8.4 47 328-374 67-115 (437)
236 3ics_A Coenzyme A-disulfide re 97.9 2.1E-05 7.2E-10 83.0 9.7 93 4-155 187-281 (588)
237 4dsg_A UDP-galactopyranose mut 97.9 8E-06 2.7E-10 84.0 6.1 49 3-51 8-60 (484)
238 2jae_A L-amino acid oxidase; o 97.9 6.6E-06 2.2E-10 84.8 5.2 42 2-43 9-52 (489)
239 2yg5_A Putrescine oxidase; oxi 97.9 5.9E-06 2E-10 84.3 4.6 41 3-43 4-46 (453)
240 3itj_A Thioredoxin reductase 1 97.9 6E-05 2.1E-09 73.2 11.7 96 4-155 173-270 (338)
241 3h8l_A NADH oxidase; membrane 97.9 2.3E-05 7.8E-10 78.8 8.8 47 328-374 64-116 (409)
242 3d1c_A Flavin-containing putat 97.9 2.8E-05 9.6E-10 76.7 9.1 101 4-154 166-270 (369)
243 1fl2_A Alkyl hydroperoxide red 97.9 6.6E-05 2.3E-09 72.1 11.3 94 4-155 144-241 (310)
244 2bi7_A UDP-galactopyranose mut 97.9 9.4E-06 3.2E-10 80.8 5.0 42 1-43 1-44 (384)
245 2q7v_A Thioredoxin reductase; 97.9 6.9E-05 2.4E-09 72.6 11.1 95 4-155 152-248 (325)
246 1jnr_A Adenylylsulfate reducta 97.8 8.4E-05 2.9E-09 79.1 12.2 33 4-36 22-60 (643)
247 3nks_A Protoporphyrinogen oxid 97.8 8.7E-06 3E-10 83.6 4.5 40 4-43 2-45 (477)
248 3fbs_A Oxidoreductase; structu 97.8 4E-05 1.4E-09 73.0 8.8 33 198-235 3-35 (297)
249 3lov_A Protoporphyrinogen oxid 97.8 1.1E-05 3.9E-10 82.7 5.1 40 4-43 4-47 (475)
250 2ivd_A PPO, PPOX, protoporphyr 97.8 1.1E-05 3.7E-10 82.9 4.8 41 3-43 15-57 (478)
251 3lzw_A Ferredoxin--NADP reduct 97.8 0.00015 5.2E-09 70.1 12.8 94 4-155 154-249 (332)
252 1vdc_A NTR, NADPH dependent th 97.8 9.6E-05 3.3E-09 71.7 11.4 96 4-155 159-258 (333)
253 3h28_A Sulfide-quinone reducta 97.8 3.5E-05 1.2E-09 77.9 8.4 47 328-374 64-112 (430)
254 2vvm_A Monoamine oxidase N; FA 97.8 1.2E-05 4.1E-10 83.0 4.8 39 5-43 40-80 (495)
255 1d5t_A Guanine nucleotide diss 97.8 1.4E-05 4.9E-10 80.9 5.2 43 1-43 3-47 (433)
256 3l8k_A Dihydrolipoyl dehydroge 97.8 7E-05 2.4E-09 76.6 10.4 102 4-162 172-275 (466)
257 3cty_A Thioredoxin reductase; 97.8 0.00011 3.6E-09 71.0 11.2 94 4-155 155-251 (319)
258 3klj_A NAD(FAD)-dependent dehy 97.8 4.1E-05 1.4E-09 76.2 8.3 45 329-373 71-118 (385)
259 3f8d_A Thioredoxin reductase ( 97.8 9.7E-05 3.3E-09 71.2 10.7 95 4-155 154-250 (323)
260 2q0l_A TRXR, thioredoxin reduc 97.8 8.8E-05 3E-09 71.3 10.1 96 4-155 143-240 (311)
261 1b37_A Protein (polyamine oxid 97.8 1.5E-05 5.1E-10 81.8 4.6 54 1-54 1-57 (472)
262 2x8g_A Thioredoxin glutathione 97.8 0.00021 7.2E-09 75.5 13.5 105 4-161 286-397 (598)
263 1i8t_A UDP-galactopyranose mut 97.7 2E-05 6.9E-10 77.9 4.9 39 5-43 2-42 (367)
264 2iid_A L-amino-acid oxidase; f 97.7 1.8E-05 6E-10 81.8 4.6 41 3-43 32-74 (498)
265 2a87_A TRXR, TR, thioredoxin r 97.7 8.7E-05 3E-09 72.2 9.1 95 4-155 155-251 (335)
266 4g6h_A Rotenone-insensitive NA 97.7 8.4E-05 2.9E-09 76.6 9.3 95 5-155 218-331 (502)
267 3p1w_A Rabgdi protein; GDI RAB 97.7 2.9E-05 9.8E-10 78.9 5.0 43 1-43 17-61 (475)
268 1c0p_A D-amino acid oxidase; a 97.6 3.9E-05 1.3E-09 75.6 5.1 35 1-35 3-39 (363)
269 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00025 8.6E-09 73.5 10.8 97 4-161 355-455 (521)
270 3r9u_A Thioredoxin reductase; 97.5 0.00026 9E-09 67.8 9.3 95 4-155 147-243 (315)
271 3k30_A Histamine dehydrogenase 97.5 0.00025 8.6E-09 76.2 9.9 97 4-155 523-623 (690)
272 2z3y_A Lysine-specific histone 97.4 7.7E-05 2.6E-09 79.7 4.8 41 3-43 106-148 (662)
273 2xag_A Lysine-specific histone 97.4 9.7E-05 3.3E-09 80.5 5.1 41 3-43 277-319 (852)
274 4a5l_A Thioredoxin reductase; 97.4 0.00049 1.7E-08 66.0 9.6 100 4-162 152-253 (314)
275 3pl8_A Pyranose 2-oxidase; sub 97.4 8.7E-05 3E-09 78.5 4.5 40 2-41 44-85 (623)
276 2xve_A Flavin-containing monoo 97.4 0.00084 2.9E-08 68.4 11.7 33 4-36 197-231 (464)
277 3ihm_A Styrene monooxygenase A 97.4 7.3E-05 2.5E-09 75.6 3.5 33 3-35 21-55 (430)
278 4fk1_A Putative thioredoxin re 97.3 0.00073 2.5E-08 64.6 9.6 32 199-235 8-39 (304)
279 3alj_A 2-methyl-3-hydroxypyrid 97.2 0.00034 1.2E-08 69.3 5.9 48 325-372 112-161 (379)
280 1lqt_A FPRA; NADP+ derivative, 97.2 0.0014 4.7E-08 66.7 10.4 34 4-37 147-203 (456)
281 4a9w_A Monooxygenase; baeyer-v 97.2 0.00089 3E-08 65.3 8.8 31 4-35 163-195 (357)
282 2bry_A NEDD9 interacting prote 97.1 0.00034 1.2E-08 72.0 5.4 36 196-236 91-126 (497)
283 3g3e_A D-amino-acid oxidase; F 97.1 0.00018 6.2E-09 70.4 3.1 32 5-36 1-40 (351)
284 2gv8_A Monooxygenase; FMO, FAD 97.1 0.00098 3.3E-08 67.6 8.2 32 4-35 212-246 (447)
285 4gcm_A TRXR, thioredoxin reduc 97.0 0.005 1.7E-07 58.9 12.1 34 4-37 145-180 (312)
286 2gag_A Heterotetrameric sarcos 97.0 0.0015 5.2E-08 72.6 9.4 95 5-161 285-385 (965)
287 3g5s_A Methylenetetrahydrofola 96.9 0.00063 2.2E-08 66.4 4.8 34 5-38 2-37 (443)
288 2vdc_G Glutamate synthase [NAD 96.9 0.0013 4.4E-08 66.8 7.3 33 4-36 264-299 (456)
289 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00031 1.1E-08 74.6 2.2 34 4-37 56-100 (721)
290 2x3n_A Probable FAD-dependent 96.8 0.0014 4.7E-08 65.3 6.7 34 198-236 7-40 (399)
291 1o94_A Tmadh, trimethylamine d 96.8 0.0013 4.4E-08 71.0 6.7 68 4-107 528-599 (729)
292 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.0021 7.2E-08 68.7 8.2 52 80-155 576-627 (671)
293 1cjc_A Protein (adrenodoxin re 96.8 0.0046 1.6E-07 62.8 10.3 33 4-36 145-200 (460)
294 3v76_A Flavoprotein; structura 96.8 0.0011 3.8E-08 66.4 5.4 35 197-236 27-61 (417)
295 3ces_A MNMG, tRNA uridine 5-ca 96.8 0.0015 5.3E-08 68.4 6.6 46 326-371 130-181 (651)
296 2vou_A 2,6-dihydroxypyridine h 96.8 0.002 6.8E-08 64.2 7.0 35 197-236 5-39 (397)
297 3nlc_A Uncharacterized protein 96.7 0.0021 7.4E-08 66.5 7.1 48 325-372 225-278 (549)
298 1rp0_A ARA6, thiazole biosynth 96.7 0.0025 8.5E-08 60.3 7.0 34 198-236 40-74 (284)
299 3gwf_A Cyclohexanone monooxyge 96.7 0.0056 1.9E-07 63.5 10.1 33 4-36 178-212 (540)
300 1vg0_A RAB proteins geranylger 96.7 0.0014 4.9E-08 68.6 5.3 43 1-43 5-49 (650)
301 4ap3_A Steroid monooxygenase; 96.6 0.0011 3.7E-08 69.0 4.3 33 198-235 22-54 (549)
302 3t37_A Probable dehydrogenase; 96.6 0.0018 6.2E-08 67.1 5.7 34 4-37 17-53 (526)
303 1yvv_A Amine oxidase, flavin-c 96.5 0.0069 2.4E-07 58.4 8.8 33 198-235 3-35 (336)
304 2zxi_A TRNA uridine 5-carboxym 96.5 0.0035 1.2E-07 65.5 6.9 48 325-372 128-181 (637)
305 3cp8_A TRNA uridine 5-carboxym 96.5 0.003 1E-07 66.2 6.3 33 198-235 22-54 (641)
306 1gte_A Dihydropyrimidine dehyd 96.4 0.011 3.9E-07 66.1 11.0 31 5-35 333-366 (1025)
307 3rp8_A Flavoprotein monooxygen 96.4 0.0034 1.2E-07 62.6 5.7 37 195-236 21-57 (407)
308 3qj4_A Renalase; FAD/NAD(P)-bi 96.3 0.0082 2.8E-07 58.3 8.3 33 198-235 2-37 (342)
309 1ju2_A HydroxynitrIle lyase; f 96.3 0.0014 4.8E-08 68.0 2.9 34 4-37 26-60 (536)
310 1y0p_A Fumarate reductase flav 96.3 0.013 4.3E-07 61.4 10.1 35 197-236 126-160 (571)
311 1kdg_A CDH, cellobiose dehydro 96.3 0.0025 8.6E-08 66.4 4.7 34 3-36 6-41 (546)
312 2i0z_A NAD(FAD)-utilizing dehy 96.3 0.0033 1.1E-07 63.7 5.4 47 325-371 139-191 (447)
313 1k0i_A P-hydroxybenzoate hydro 96.2 0.0047 1.6E-07 61.2 6.0 34 198-236 3-36 (394)
314 3uox_A Otemo; baeyer-villiger 96.2 0.0026 8.9E-08 66.1 3.9 33 198-235 10-42 (545)
315 2gqf_A Hypothetical protein HI 96.2 0.0033 1.1E-07 62.7 4.3 34 198-236 5-38 (401)
316 3nix_A Flavoprotein/dehydrogen 96.2 0.0038 1.3E-07 62.5 4.8 33 198-235 6-38 (421)
317 2xdo_A TETX2 protein; tetracyc 96.2 0.011 3.6E-07 58.8 8.0 35 197-236 26-60 (398)
318 3qvp_A Glucose oxidase; oxidor 96.1 0.0035 1.2E-07 65.4 4.3 33 3-35 18-53 (583)
319 3i3l_A Alkylhalidase CMLS; fla 96.0 0.0054 1.8E-07 64.3 5.4 35 196-235 22-56 (591)
320 1y56_B Sarcosine oxidase; dehy 96.0 0.017 5.9E-07 56.8 8.7 33 198-235 6-38 (382)
321 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.0057 2E-07 55.2 4.6 36 194-234 28-63 (223)
322 3q9t_A Choline dehydrogenase a 95.9 0.0046 1.6E-07 64.6 4.3 34 3-36 5-41 (577)
323 1coy_A Cholesterol oxidase; ox 95.9 0.0052 1.8E-07 63.3 4.5 34 3-36 10-45 (507)
324 1n4w_A CHOD, cholesterol oxida 95.9 0.0055 1.9E-07 63.1 4.5 36 3-38 4-41 (504)
325 3fmw_A Oxygenase; mithramycin, 95.8 0.0067 2.3E-07 63.4 4.8 34 198-236 50-83 (570)
326 1qo8_A Flavocytochrome C3 fuma 95.8 0.066 2.3E-06 55.8 12.4 34 198-236 122-155 (566)
327 3dje_A Fructosyl amine: oxygen 95.7 0.021 7.1E-07 57.5 8.1 34 198-235 7-40 (438)
328 2gag_B Heterotetrameric sarcos 95.7 0.02 6.9E-07 56.7 7.9 33 198-235 22-56 (405)
329 4b63_A L-ornithine N5 monooxyg 95.6 0.034 1.2E-06 57.0 9.4 33 4-36 246-282 (501)
330 3atr_A Conserved archaeal prot 95.6 0.0052 1.8E-07 62.3 3.2 34 198-236 7-40 (453)
331 3cgv_A Geranylgeranyl reductas 95.6 0.0066 2.2E-07 60.1 3.8 33 199-236 6-38 (397)
332 4at0_A 3-ketosteroid-delta4-5a 95.6 0.083 2.9E-06 54.2 12.2 33 199-236 43-75 (510)
333 3fim_B ARYL-alcohol oxidase; A 95.6 0.0052 1.8E-07 64.0 3.0 34 4-37 2-38 (566)
334 3pvc_A TRNA 5-methylaminomethy 95.5 0.031 1.1E-06 59.8 8.9 34 197-235 264-297 (689)
335 4hb9_A Similarities with proba 95.5 0.028 9.6E-07 55.6 8.1 33 199-236 3-35 (412)
336 3e1t_A Halogenase; flavoprotei 95.5 0.025 8.4E-07 58.3 7.6 33 198-235 8-40 (512)
337 1d4d_A Flavocytochrome C fumar 95.4 0.054 1.8E-06 56.5 10.2 35 197-236 126-160 (572)
338 2jbv_A Choline oxidase; alcoho 95.4 0.01 3.4E-07 61.7 4.5 35 3-37 12-49 (546)
339 2qa1_A PGAE, polyketide oxygen 95.3 0.036 1.2E-06 56.8 8.0 36 196-236 10-45 (500)
340 2qa2_A CABE, polyketide oxygen 95.1 0.045 1.5E-06 56.1 8.2 35 197-236 12-46 (499)
341 3ps9_A TRNA 5-methylaminomethy 95.1 0.033 1.1E-06 59.4 7.5 34 197-235 272-305 (676)
342 1gpe_A Protein (glucose oxidas 95.1 0.014 5E-07 61.1 4.4 34 4-37 24-60 (587)
343 3ihg_A RDME; flavoenzyme, anth 95.0 0.024 8.4E-07 58.6 5.9 34 198-236 6-39 (535)
344 1w4x_A Phenylacetone monooxyge 94.9 0.076 2.6E-06 55.0 9.3 34 198-236 17-50 (542)
345 2gmh_A Electron transfer flavo 94.0 0.034 1.2E-06 58.2 4.2 34 198-236 36-75 (584)
346 2wdq_A Succinate dehydrogenase 93.8 0.71 2.4E-05 48.1 13.9 32 199-235 9-40 (588)
347 3ic5_A Putative saccharopine d 93.8 0.046 1.6E-06 43.4 3.7 32 3-34 4-38 (118)
348 2g1u_A Hypothetical protein TM 93.7 0.054 1.8E-06 45.7 4.3 32 4-35 19-52 (155)
349 3fwz_A Inner membrane protein 93.6 0.068 2.3E-06 44.3 4.6 32 4-35 7-40 (140)
350 1lss_A TRK system potassium up 93.6 0.055 1.9E-06 44.4 4.0 31 4-34 4-36 (140)
351 1id1_A Putative potassium chan 93.5 0.069 2.4E-06 44.9 4.6 31 4-34 3-35 (153)
352 3llv_A Exopolyphosphatase-rela 93.5 0.063 2.1E-06 44.4 4.2 31 4-34 6-38 (141)
353 1y56_A Hypothetical protein PH 93.5 0.046 1.6E-06 55.9 4.0 33 198-236 109-141 (493)
354 1chu_A Protein (L-aspartate ox 93.1 0.28 9.5E-06 50.7 9.3 32 199-236 10-41 (540)
355 3kkj_A Amine oxidase, flavin-c 93.1 0.051 1.7E-06 49.9 3.3 33 199-236 4-36 (336)
356 1kf6_A Fumarate reductase flav 93.0 0.92 3.2E-05 47.4 13.2 32 199-235 7-40 (602)
357 4e12_A Diketoreductase; oxidor 93.0 0.08 2.7E-06 49.8 4.5 35 1-35 1-37 (283)
358 2ewd_A Lactate dehydrogenase,; 92.5 0.098 3.3E-06 50.1 4.4 35 1-35 1-38 (317)
359 1pjq_A CYSG, siroheme synthase 92.2 0.1 3.6E-06 52.6 4.4 35 195-234 10-44 (457)
360 2hmt_A YUAA protein; RCK, KTN, 92.1 0.13 4.4E-06 42.3 4.3 31 4-34 6-38 (144)
361 3qha_A Putative oxidoreductase 91.9 0.11 3.9E-06 49.0 4.1 36 1-36 12-49 (296)
362 4dgk_A Phytoene dehydrogenase; 91.7 0.073 2.5E-06 54.4 2.7 49 324-372 225-279 (501)
363 3dfz_A SIRC, precorrin-2 dehyd 91.6 0.16 5.3E-06 45.7 4.4 31 4-34 31-63 (223)
364 3c85_A Putative glutathione-re 91.3 0.15 5.2E-06 44.2 4.0 30 5-34 40-72 (183)
365 4dio_A NAD(P) transhydrogenase 91.2 0.17 5.7E-06 49.8 4.5 32 4-35 190-223 (405)
366 1t2d_A LDH-P, L-lactate dehydr 91.0 0.19 6.4E-06 48.1 4.6 35 1-35 1-38 (322)
367 1bg6_A N-(1-D-carboxylethyl)-L 90.7 0.18 6E-06 49.0 4.2 34 1-34 1-36 (359)
368 2x5o_A UDP-N-acetylmuramoylala 90.2 0.18 6.2E-06 50.6 3.8 34 4-37 5-40 (439)
369 3oj0_A Glutr, glutamyl-tRNA re 90.2 0.21 7.2E-06 41.4 3.7 31 4-34 21-53 (144)
370 3p2y_A Alanine dehydrogenase/p 90.1 0.19 6.6E-06 48.9 3.8 32 4-35 184-217 (381)
371 3l4b_C TRKA K+ channel protien 90.0 0.19 6.5E-06 45.0 3.5 30 6-35 2-33 (218)
372 1kyq_A Met8P, siroheme biosynt 89.9 0.17 6E-06 46.9 3.2 31 4-34 13-45 (274)
373 3i83_A 2-dehydropantoate 2-red 89.9 0.24 8.1E-06 47.4 4.2 30 5-34 3-34 (320)
374 2g1u_A Hypothetical protein TM 89.8 0.23 7.7E-06 41.8 3.6 39 193-236 15-53 (155)
375 2a9f_A Putative malic enzyme ( 89.7 0.23 7.9E-06 48.3 3.9 31 4-34 188-221 (398)
376 3ado_A Lambda-crystallin; L-gu 89.5 0.29 9.8E-06 46.6 4.4 32 4-35 6-39 (319)
377 3lk7_A UDP-N-acetylmuramoylala 89.3 0.24 8.2E-06 49.9 4.0 32 4-35 9-42 (451)
378 4g65_A TRK system potassium up 89.1 0.23 7.8E-06 50.1 3.6 33 3-35 2-36 (461)
379 3g5s_A Methylenetetrahydrofola 89.0 0.25 8.4E-06 48.4 3.6 34 198-236 2-35 (443)
380 3oz2_A Digeranylgeranylglycero 88.9 0.22 7.5E-06 48.7 3.3 33 199-236 6-38 (397)
381 3hn2_A 2-dehydropantoate 2-red 88.9 0.27 9.1E-06 46.8 3.7 30 5-34 3-34 (312)
382 1vl6_A Malate oxidoreductase; 88.8 0.29 9.8E-06 47.5 3.9 31 4-34 192-225 (388)
383 1f0y_A HCDH, L-3-hydroxyacyl-C 88.7 0.35 1.2E-05 45.7 4.5 31 5-35 16-48 (302)
384 3cky_A 2-hydroxymethyl glutara 88.5 0.29 9.8E-06 46.2 3.7 34 1-34 1-36 (301)
385 3g79_A NDP-N-acetyl-D-galactos 88.5 0.27 9.3E-06 49.6 3.7 34 3-36 17-54 (478)
386 2dpo_A L-gulonate 3-dehydrogen 88.5 0.37 1.3E-05 46.0 4.4 32 4-35 6-39 (319)
387 1x13_A NAD(P) transhydrogenase 88.3 0.33 1.1E-05 47.9 4.1 32 4-35 172-205 (401)
388 1pzg_A LDH, lactate dehydrogen 88.3 0.36 1.2E-05 46.3 4.2 31 5-35 10-43 (331)
389 2vvm_A Monoamine oxidase N; FA 88.3 0.61 2.1E-05 47.4 6.3 40 95-155 272-311 (495)
390 1kyq_A Met8P, siroheme biosynt 88.3 0.21 7.1E-06 46.4 2.4 35 195-234 11-45 (274)
391 3gg2_A Sugar dehydrogenase, UD 88.2 0.34 1.2E-05 48.7 4.2 32 5-36 3-36 (450)
392 3g17_A Similar to 2-dehydropan 88.2 0.34 1.2E-05 45.6 4.0 31 5-35 3-35 (294)
393 3ghy_A Ketopantoate reductase 88.1 0.38 1.3E-05 46.2 4.4 33 1-34 1-35 (335)
394 2q3e_A UDP-glucose 6-dehydroge 88.0 0.32 1.1E-05 49.2 3.8 35 1-35 2-40 (467)
395 4e21_A 6-phosphogluconate dehy 88.0 0.37 1.3E-05 46.8 4.2 35 1-35 19-55 (358)
396 1l7d_A Nicotinamide nucleotide 88.0 0.41 1.4E-05 47.0 4.5 32 4-35 172-205 (384)
397 2raf_A Putative dinucleotide-b 87.9 0.43 1.5E-05 42.4 4.3 33 4-36 19-53 (209)
398 3ihm_A Styrene monooxygenase A 87.9 0.23 7.9E-06 49.7 2.7 35 196-235 21-55 (430)
399 3nrn_A Uncharacterized protein 87.8 0.26 9E-06 49.0 3.1 51 323-373 192-245 (421)
400 2hjr_A Malate dehydrogenase; m 87.6 0.46 1.6E-05 45.5 4.5 32 4-35 14-48 (328)
401 1id1_A Putative potassium chan 87.5 0.52 1.8E-05 39.4 4.3 34 197-235 3-36 (153)
402 3doj_A AT3G25530, dehydrogenas 87.5 0.43 1.5E-05 45.3 4.2 32 4-35 21-54 (310)
403 1ks9_A KPA reductase;, 2-dehyd 87.4 0.45 1.5E-05 44.4 4.3 30 6-35 2-33 (291)
404 2ew2_A 2-dehydropantoate 2-red 87.3 0.42 1.4E-05 45.2 4.1 30 5-34 4-35 (316)
405 2oln_A NIKD protein; flavoprot 87.2 0.37 1.3E-05 47.4 3.7 32 199-235 6-37 (397)
406 1lld_A L-lactate dehydrogenase 87.2 0.44 1.5E-05 45.4 4.1 31 4-34 7-41 (319)
407 2iid_A L-amino-acid oxidase; f 87.2 0.31 1E-05 49.7 3.2 35 196-235 32-66 (498)
408 3c4a_A Probable tryptophan hyd 87.2 0.31 1E-05 47.8 3.1 34 198-236 1-36 (381)
409 3k96_A Glycerol-3-phosphate de 87.0 0.51 1.7E-05 45.8 4.5 32 4-35 29-62 (356)
410 1ryi_A Glycine oxidase; flavop 87.0 0.34 1.2E-05 47.3 3.3 33 198-235 18-50 (382)
411 2uyy_A N-PAC protein; long-cha 87.0 0.5 1.7E-05 44.9 4.4 32 4-35 30-63 (316)
412 3ka7_A Oxidoreductase; structu 87.0 0.29 1E-05 48.6 2.8 33 198-235 1-33 (425)
413 2b9w_A Putative aminooxidase; 86.9 0.41 1.4E-05 47.6 3.8 35 196-235 5-40 (424)
414 3dme_A Conserved exported prot 86.8 0.36 1.2E-05 46.6 3.3 33 198-235 5-37 (369)
415 3dhn_A NAD-dependent epimerase 86.5 0.46 1.6E-05 42.5 3.6 35 1-35 1-38 (227)
416 1y6j_A L-lactate dehydrogenase 86.4 0.49 1.7E-05 45.1 3.9 32 4-35 7-42 (318)
417 2gf3_A MSOX, monomeric sarcosi 86.3 0.39 1.3E-05 46.9 3.3 33 198-235 4-36 (389)
418 2uzz_A N-methyl-L-tryptophan o 86.3 0.3 1E-05 47.4 2.5 32 199-235 4-35 (372)
419 3mog_A Probable 3-hydroxybutyr 86.2 0.57 1.9E-05 47.5 4.5 33 3-35 4-38 (483)
420 3gpi_A NAD-dependent epimerase 86.1 0.65 2.2E-05 43.2 4.6 34 1-35 1-36 (286)
421 2y0c_A BCEC, UDP-glucose dehyd 86.1 0.53 1.8E-05 47.7 4.2 32 4-35 8-41 (478)
422 3g3e_A D-amino-acid oxidase; F 86.0 0.4 1.4E-05 46.2 3.2 37 199-235 2-39 (351)
423 3nks_A Protoporphyrinogen oxid 86.0 0.3 1E-05 49.4 2.4 35 198-235 3-37 (477)
424 3ego_A Probable 2-dehydropanto 86.0 0.56 1.9E-05 44.5 4.1 30 5-34 3-33 (307)
425 3llv_A Exopolyphosphatase-rela 85.8 0.54 1.8E-05 38.6 3.5 35 196-235 5-39 (141)
426 4gde_A UDP-galactopyranose mut 85.8 0.49 1.7E-05 48.2 3.9 46 324-369 226-274 (513)
427 1ez4_A Lactate dehydrogenase; 85.8 0.53 1.8E-05 44.8 3.9 34 1-34 2-39 (318)
428 1ur5_A Malate dehydrogenase; o 85.8 0.62 2.1E-05 44.2 4.3 31 5-35 3-36 (309)
429 1pjc_A Protein (L-alanine dehy 85.7 0.61 2.1E-05 45.4 4.3 31 4-34 167-199 (361)
430 3tl2_A Malate dehydrogenase; c 85.7 0.63 2.2E-05 44.2 4.3 31 4-34 8-41 (315)
431 3l6d_A Putative oxidoreductase 85.6 0.72 2.5E-05 43.7 4.7 32 4-35 9-42 (306)
432 2e1m_A L-glutamate oxidase; L- 85.6 0.42 1.4E-05 46.7 3.1 35 195-234 42-76 (376)
433 3g0o_A 3-hydroxyisobutyrate de 85.6 0.61 2.1E-05 44.0 4.2 32 4-35 7-40 (303)
434 3i6d_A Protoporphyrinogen oxid 85.5 0.28 9.7E-06 49.3 1.9 38 198-235 6-44 (470)
435 4ffl_A PYLC; amino acid, biosy 85.4 0.66 2.3E-05 45.0 4.4 32 5-36 2-35 (363)
436 3gvi_A Malate dehydrogenase; N 85.4 0.71 2.4E-05 44.1 4.5 32 4-35 7-41 (324)
437 4ezb_A Uncharacterized conserv 85.3 0.48 1.7E-05 45.1 3.3 32 4-35 24-58 (317)
438 3k7m_X 6-hydroxy-L-nicotine ox 85.3 0.45 1.5E-05 47.3 3.2 32 199-235 3-34 (431)
439 2aef_A Calcium-gated potassium 85.2 0.42 1.4E-05 43.2 2.7 31 4-35 9-41 (234)
440 3dtt_A NADP oxidoreductase; st 85.2 0.68 2.3E-05 42.2 4.1 32 4-35 19-52 (245)
441 1c0p_A D-amino acid oxidase; a 85.2 0.53 1.8E-05 45.6 3.6 33 198-235 7-39 (363)
442 3eag_A UDP-N-acetylmuramate:L- 85.2 0.67 2.3E-05 44.3 4.2 33 3-35 3-38 (326)
443 4huj_A Uncharacterized protein 85.1 0.34 1.2E-05 43.5 2.0 32 4-35 23-57 (220)
444 3ic5_A Putative saccharopine d 85.1 0.35 1.2E-05 38.0 1.9 36 196-235 4-39 (118)
445 3pef_A 6-phosphogluconate dehy 85.0 0.6 2E-05 43.7 3.7 31 5-35 2-34 (287)
446 1z82_A Glycerol-3-phosphate de 85.0 0.66 2.3E-05 44.5 4.1 32 3-34 13-46 (335)
447 2jae_A L-amino acid oxidase; o 84.9 0.48 1.7E-05 48.1 3.3 35 196-235 10-44 (489)
448 2hmt_A YUAA protein; RCK, KTN, 84.8 0.54 1.9E-05 38.4 3.0 36 195-235 4-39 (144)
449 3c85_A Putative glutathione-re 84.8 0.67 2.3E-05 39.9 3.7 36 195-235 37-73 (183)
450 3pid_A UDP-glucose 6-dehydroge 84.7 0.71 2.4E-05 45.9 4.3 33 4-36 36-69 (432)
451 3fwz_A Inner membrane protein 84.6 0.71 2.4E-05 37.9 3.6 35 196-235 6-40 (140)
452 2vhw_A Alanine dehydrogenase; 84.4 0.75 2.6E-05 45.0 4.3 31 4-34 168-200 (377)
453 1lss_A TRK system potassium up 84.4 0.53 1.8E-05 38.2 2.8 34 197-235 4-37 (140)
454 1jw9_B Molybdopterin biosynthe 84.4 0.68 2.3E-05 42.4 3.7 30 5-34 32-64 (249)
455 3pqe_A L-LDH, L-lactate dehydr 84.4 0.78 2.7E-05 43.8 4.3 31 4-34 5-39 (326)
456 2vns_A Metalloreductase steap3 84.4 0.8 2.7E-05 40.8 4.1 30 5-34 29-60 (215)
457 3nyc_A D-arginine dehydrogenas 84.3 0.46 1.6E-05 46.2 2.8 34 196-235 8-41 (381)
458 2izz_A Pyrroline-5-carboxylate 84.3 0.73 2.5E-05 43.9 4.1 33 3-35 21-59 (322)
459 1zcj_A Peroxisomal bifunctiona 84.2 0.82 2.8E-05 46.1 4.6 32 4-35 37-70 (463)
460 2v6b_A L-LDH, L-lactate dehydr 84.1 0.75 2.6E-05 43.5 4.0 29 6-34 2-34 (304)
461 1hdo_A Biliverdin IX beta redu 84.1 0.89 3E-05 39.6 4.3 34 1-35 1-37 (206)
462 3p7m_A Malate dehydrogenase; p 84.1 0.92 3.1E-05 43.2 4.6 32 4-35 5-39 (321)
463 3ius_A Uncharacterized conserv 84.1 0.74 2.5E-05 42.7 4.0 31 4-34 5-37 (286)
464 2eez_A Alanine dehydrogenase; 84.0 0.8 2.7E-05 44.6 4.3 31 4-34 166-198 (369)
465 3vtf_A UDP-glucose 6-dehydroge 83.9 0.78 2.7E-05 45.7 4.2 33 4-36 21-55 (444)
466 3k6j_A Protein F01G10.3, confi 83.9 0.85 2.9E-05 45.7 4.5 31 5-35 55-87 (460)
467 2qyt_A 2-dehydropantoate 2-red 83.9 0.57 2E-05 44.4 3.1 29 5-33 9-45 (317)
468 1evy_A Glycerol-3-phosphate de 83.9 0.53 1.8E-05 45.8 3.0 30 6-35 17-48 (366)
469 3l9w_A Glutathione-regulated p 83.8 0.8 2.7E-05 45.4 4.2 32 4-35 4-37 (413)
470 4dll_A 2-hydroxy-3-oxopropiona 83.8 0.79 2.7E-05 43.7 4.1 31 5-35 32-64 (320)
471 4gbj_A 6-phosphogluconate dehy 83.8 0.59 2E-05 44.1 3.1 34 3-36 4-39 (297)
472 1s3e_A Amine oxidase [flavin-c 83.8 0.98 3.3E-05 46.2 5.0 52 81-155 216-267 (520)
473 4a7p_A UDP-glucose dehydrogena 83.6 0.87 3E-05 45.6 4.4 34 4-37 8-43 (446)
474 3c4n_A Uncharacterized protein 83.6 0.62 2.1E-05 46.0 3.4 33 198-235 37-71 (405)
475 2bcg_G Secretory pathway GDP d 83.3 0.68 2.3E-05 46.5 3.6 33 198-235 12-44 (453)
476 3phh_A Shikimate dehydrogenase 83.1 1 3.5E-05 41.6 4.4 31 4-34 118-150 (269)
477 1rsg_A FMS1 protein; FAD bindi 83.1 0.61 2.1E-05 47.7 3.2 34 197-235 8-42 (516)
478 3hdq_A UDP-galactopyranose mut 82.9 0.72 2.5E-05 45.4 3.4 34 197-235 29-62 (397)
479 1pjq_A CYSG, siroheme synthase 82.8 0.79 2.7E-05 46.1 3.7 31 4-34 12-44 (457)
480 1v0j_A UDP-galactopyranose mut 82.7 0.85 2.9E-05 44.9 3.9 34 197-235 7-41 (399)
481 3pdu_A 3-hydroxyisobutyrate de 82.6 0.71 2.4E-05 43.2 3.2 31 5-35 2-34 (287)
482 2bi7_A UDP-galactopyranose mut 82.5 0.66 2.3E-05 45.5 3.0 33 198-235 4-36 (384)
483 3qsg_A NAD-binding phosphogluc 82.5 0.84 2.9E-05 43.3 3.7 31 4-34 24-57 (312)
484 3axb_A Putative oxidoreductase 82.5 0.71 2.4E-05 46.2 3.3 31 198-233 24-55 (448)
485 1mv8_A GMD, GDP-mannose 6-dehy 82.5 0.79 2.7E-05 45.8 3.6 30 6-35 2-33 (436)
486 2qcu_A Aerobic glycerol-3-phos 82.5 0.71 2.4E-05 47.1 3.3 33 198-235 4-36 (501)
487 3c96_A Flavin-containing monoo 82.4 0.82 2.8E-05 45.1 3.7 34 198-236 5-39 (410)
488 2h78_A Hibadh, 3-hydroxyisobut 82.3 0.87 3E-05 42.9 3.7 31 5-35 4-36 (302)
489 3d0o_A L-LDH 1, L-lactate dehy 82.3 1 3.4E-05 42.9 4.1 31 4-34 6-40 (317)
490 2rir_A Dipicolinate synthase, 82.3 1.1 3.6E-05 42.3 4.2 31 4-34 157-189 (300)
491 1guz_A Malate dehydrogenase; o 82.2 1 3.6E-05 42.6 4.2 30 6-35 2-35 (310)
492 3tri_A Pyrroline-5-carboxylate 82.2 1.1 3.9E-05 41.7 4.4 32 4-35 3-39 (280)
493 1y7t_A Malate dehydrogenase; N 82.2 0.78 2.7E-05 43.9 3.3 34 1-34 1-44 (327)
494 2rcy_A Pyrroline carboxylate r 82.1 1 3.5E-05 41.3 4.0 32 4-35 4-41 (262)
495 3d4o_A Dipicolinate synthase s 82.0 1.1 3.7E-05 42.1 4.2 31 4-34 155-187 (293)
496 3hwr_A 2-dehydropantoate 2-red 82.0 1 3.4E-05 42.9 4.0 31 3-34 18-50 (318)
497 3jsk_A Cypbp37 protein; octame 81.9 0.97 3.3E-05 43.4 3.8 34 198-236 80-115 (344)
498 2egg_A AROE, shikimate 5-dehyd 81.9 1.1 3.8E-05 42.1 4.2 31 4-34 141-174 (297)
499 2aqj_A Tryptophan halogenase, 81.9 0.75 2.6E-05 47.4 3.3 48 325-372 170-223 (538)
500 1nyt_A Shikimate 5-dehydrogena 81.9 1.1 3.9E-05 41.4 4.2 31 4-34 119-151 (271)
No 1
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=3.9e-52 Score=435.50 Aligned_cols=457 Identities=18% Similarity=0.254 Sum_probs=319.5
Q ss_pred CCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCC----CCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFP----WPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||+|..+.||++.+++|...++++..+ .+.+ ...++.+
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~-~~~~~~~ 86 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTW-KTTYITQ 86 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCC-SBSEEEH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCC-cccCCCH
Confidence 36999999999999999999 68899999999999999999899999999999999887431 1233 4678899
Q ss_pred HHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 77 TEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.++.+|+..+++++++..+++++++|+++++.. ..+.|+|++.++. ++.||+||+|||.+
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~--------------~~~~~~V~~~~G~-----~i~ad~lV~AtG~~- 146 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFKFGTEVTSALYLD--------------DENLWEVTTDHGE-----VYRAKYVVNAVGLL- 146 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEESCCEEEEEEET--------------TTTEEEEEETTSC-----EEEEEEEEECCCSC-
T ss_pred HHHHHHHHHHHHHcCCcceeEeccEEEEEEEeC--------------CCCEEEEEEcCCC-----EEEeCEEEECCccc-
Confidence 999999999999999988899999999999842 1568999887664 78999999999988
Q ss_pred CCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 157 DVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 157 ~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
+.|+.|++| |.+.|.|..+|+..|.. .....+|+|+|||+|.||+|+|.+|++.+. +||+++|++.
T Consensus 147 s~p~~p~ip---G~~~f~g~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~~-----~Vtv~~r~~~ 212 (540)
T 3gwf_A 147 SAINFPNLP---GLDTFEGETIHTAAWPE------GKSLAGRRVGVIGTGSTGQQVITSLAPEVE-----HLTVFVRTPQ 212 (540)
T ss_dssp CSBCCCCCT---TGGGCCSEEEEGGGCCS------SCCCTTSEEEEECCSHHHHHHHHHHTTTCS-----EEEEEESSCC
T ss_pred ccCCCCCCC---CccccCCCEEEeecCCC------ccccccceEEEECCCchHHHHHHHHHhhCC-----EEEEEECCCC
Confidence 489999999 99999999999999876 245789999999999999999999998765 4999999999
Q ss_pred eeecCcccCCccchhhhhhhhh----hhh---c-----------CC------Cch--hHHHHH------HH----h----
Q 010421 237 WTVPHYRIWGLPFFMFYSTRFS----QFL---H-----------GS------PNQ--SLLRTL------LC----L---- 276 (511)
Q Consensus 237 ~~~p~~~~~g~p~~~~~~~r~~----~~~---~-----------~~------~~~--~~~~~~------~~----~---- 276 (511)
|++|... .++.......+. ... . .+ |.+ ..+... +. .
T Consensus 213 ~i~p~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~ 289 (540)
T 3gwf_A 213 YSVPVGN---RPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDI 289 (540)
T ss_dssp CEEECCC---CBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCT
T ss_pred ccccCcc---CCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhh
Confidence 9999876 232221111111 000 0 00 000 000000 00 0
Q ss_pred -hhhhhHHHHHHHHHHHHhccCC--cccCCCCCCCccccccccccccccCCchhhhhccCeEEEE---eCceeEEeCCcE
Q 010421 277 -LLSPLRRGVSKFIESYLLWKLP--LLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFK---RASKWWFWKGGL 350 (511)
Q Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~~v 350 (511)
..+..+....+++...+..++. ..+..|.|+ ++ +|+++.++++|++++++++|+++ ...|++++++||
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~-~~-----g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv 363 (540)
T 3gwf_A 290 ATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GL-----FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGV 363 (540)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC-SC-----CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEE
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-CC-----CccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeE
Confidence 0122334455555555555443 344567887 65 99999999999999999999999 677999999999
Q ss_pred EEcCCceeeccEEEEecCCCCcccccccC---CCcccccccCCCCcccceeeecCCCCCceEEE-eeccc-chhhhhHHH
Q 010421 351 EFEDNTKLEADVVILCTGYDGKKKLKAFL---PEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFV-GYIES-VSNLHTAEL 425 (511)
Q Consensus 351 ~~~dG~~~~~D~VI~aTG~~~~~~~~~~~---~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~~-~~~~~~~e~ 425 (511)
+++||+++++|+||+||||+++..+..-+ +.++..+.+.+.+....|+++..+++||+|++ |+..+ .+.+..+|.
T Consensus 364 ~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~ 443 (540)
T 3gwf_A 364 VTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIET 443 (540)
T ss_dssp EETTCCEEECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHH
T ss_pred EcCCCCEEECCEEEECCccCccccCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHH
Confidence 99999999999999999999986322212 22233333345567889999999999999998 76543 344678999
Q ss_pred HHHHHHHHhcC----CCCCCCHHHHHHHHHHHHHHHHHhccccCCcceeeeccccHHHH--HH--hhCCCCCCchhhHhh
Q 010421 426 RSIWLSRLIDD----KFKLPSAEKMLEQTSKEMEVMKQSTRFYKRHCISTFSINHSDEI--CE--EMGWNAWRKRNWLLE 497 (511)
Q Consensus 426 qa~~~a~~l~g----~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~l--~~--~~g~~~~~~~~~~~~ 497 (511)
|++|++++|.. ... +.+...+...+|.+.++... .++.+..|.+||++.= .+ .....|+--..+++
T Consensus 444 q~~~i~~~i~~~~~~~~~--~~~~~~~a~~~~~~~~~~~~---~~t~~~~~~swy~~~~~~g~~~~~~~~p~~~~~~~~- 517 (540)
T 3gwf_A 444 QVEWISDTIGYAERNGVR--AIEPTPEAEAEWTETCTEIA---NATLFTKGDSWIFGANIPGKKPSVLFYLGGLRNYRA- 517 (540)
T ss_dssp HHHHHHHHHHHHHHTTCS--EEEECHHHHHHHHHHHHHHH---TTSCC------------------CCCBCSCHHHHHH-
T ss_pred HHHHHHHHHHHHHHCCCe--EEEECHHHHHHHHHHHHHHH---hCCCccCCCcceeCCCCCCCCceEeeCCCCHHHHHH-
Confidence 99999998842 222 22222222334444443322 1222334789998853 22 33334443323332
Q ss_pred hcccCCccCCCCC
Q 010421 498 AFSPYGSKDYEDE 510 (511)
Q Consensus 498 ~~~~~~~~~y~~~ 510 (511)
...-..++||.|.
T Consensus 518 ~~~~~~~~~~~g~ 530 (540)
T 3gwf_A 518 VMAEVAADGYRGF 530 (540)
T ss_dssp HHHHHHHTTSTTE
T ss_pred HHhccchhcCCCe
Confidence 2333455788774
No 2
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=2.6e-52 Score=437.67 Aligned_cols=388 Identities=20% Similarity=0.313 Sum_probs=297.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCC----CCCCCCCCCCChH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFP----WPNRDDPGFPSYT 77 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 77 (511)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|..+.||++++++|...++++..+ .+.+ ...++.+.
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~-~~~~~~~~ 99 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNW-SEKYATQP 99 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCC-SSSSCBHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCC-ccCCCCHH
Confidence 46999999999999999999 89999999999999999998899999999999999988542 1233 47789999
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
++.+|++.+++++++..+++++++|+++++.. ..+.|+|++.++. ++.||+||+|||.+ +
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~--------------~~~~w~V~~~~G~-----~i~ad~lV~AtG~~-s 159 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDE--------------EGLRWTVRTDRGD-----EVSARFLVVAAGPL-S 159 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEET--------------TTTEEEEEETTCC-----EEEEEEEEECCCSE-E
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcC--------------CCCEEEEEECCCC-----EEEeCEEEECcCCC-C
Confidence 99999999999999988899999999999842 1568999887664 78999999999987 4
Q ss_pred CCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCce
Q 010421 158 VPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 158 ~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~ 237 (511)
.|+.|++| |.+.|.|.++|+..|... .....+|+|+|||+|.||+|+|.+|++.+.+ ||+++|++.|
T Consensus 160 ~p~~p~ip---G~~~f~g~~~~~~~~~~~-----~~~~~~krV~VIG~G~sgve~a~~l~~~~~~-----Vtv~~r~~~~ 226 (549)
T 4ap3_A 160 NANTPAFD---GLDRFTGDIVHTARWPHD-----GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQ-----LFVFQRSANY 226 (549)
T ss_dssp ECCCCCCT---TGGGCCSEEEEGGGCCTT-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBSE-----EEEEESSCCC
T ss_pred CCCCCCCC---CcccCCCceEEecccccc-----ccccCCCEEEEECCCchHHHHHHHHHhhCCE-----EEEEECCCCc
Confidence 89999999 999999999999998721 1346899999999999999999999998764 9999999999
Q ss_pred eecCcccCCccchhhhhhhh----hh---hhc----------------CCCchhHHHHHHHhh-----------------
Q 010421 238 TVPHYRIWGLPFFMFYSTRF----SQ---FLH----------------GSPNQSLLRTLLCLL----------------- 277 (511)
Q Consensus 238 ~~p~~~~~g~p~~~~~~~r~----~~---~~~----------------~~~~~~~~~~~~~~~----------------- 277 (511)
++|... .++.......+ .. ... ..+.++. ..++...
T Consensus 227 ilp~~~---~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r-~~~~e~~~~~~~~~~~~~~~~~~~ 302 (549)
T 4ap3_A 227 SIPAGN---VPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEER-RAVYEERWKLGGVLFSKAFPDQLT 302 (549)
T ss_dssp EEECC-------CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHH-HHHHHHHHHHCHHHHTTSSTTTTT
T ss_pred cccCcC---CCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHH-HHHHHHHHhhcchHHHhhhhhhhc
Confidence 999875 22221111110 00 000 0000000 0000000
Q ss_pred hhhhHHHHHHHHHHHHhccCC--cccCCCCCC-CccccccccccccccCCchhhhhccCeEEEE---eCceeEEeCCcEE
Q 010421 278 LSPLRRGVSKFIESYLLWKLP--LLKYGLKPD-HPFEEDYASCQMAIMPEGFFSEAEKGKIVFK---RASKWWFWKGGLE 351 (511)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~--~~~~~l~p~-~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~~v~ 351 (511)
.+........++...+..++. ..+..|.|+ +++ +|+++.++++|++++++++|+++ .+.|++++++||+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~ 377 (549)
T 4ap3_A 303 DPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAI-----GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIV 377 (549)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCB-----TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEE
Confidence 122344555566666655542 344567887 776 99999999999999999999999 7789999999999
Q ss_pred EcCCceeeccEEEEecCCCCcccccccC---CCcccccccCCCCcccceeeecCCCCCceEEE-eeccc---chhhhhHH
Q 010421 352 FEDNTKLEADVVILCTGYDGKKKLKAFL---PEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFV-GYIES---VSNLHTAE 424 (511)
Q Consensus 352 ~~dG~~~~~D~VI~aTG~~~~~~~~~~~---~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~~---~~~~~~~e 424 (511)
++|| ++++|+||+||||+++..+..-+ +.++..+.+.+.+....|+++..+++||+|++ |+..+ .+.+..+|
T Consensus 378 ~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e 456 (549)
T 4ap3_A 378 TTGA-HYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSE 456 (549)
T ss_dssp ESSC-EEECSEEEECCCEEESSTTGGGSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHH
T ss_pred eCCC-ceecCEEEECCcccccccccCceeEECCCCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHH
Confidence 9999 99999999999999875322212 22233333345557789999999999999998 65433 24467899
Q ss_pred HHHHHHHHHhc
Q 010421 425 LRSIWLSRLID 435 (511)
Q Consensus 425 ~qa~~~a~~l~ 435 (511)
.|++|++++|.
T Consensus 457 ~~~~~i~~~i~ 467 (549)
T 4ap3_A 457 LHVDWVADAIA 467 (549)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=5.3e-52 Score=435.01 Aligned_cols=394 Identities=21% Similarity=0.348 Sum_probs=296.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCC----CCCCCCCCCChH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPW----PNRDDPGFPSYT 77 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 77 (511)
.+||+|||||++|+++|..| .|++|+|||+++.+||+|..+.||+++++++...|+++..|. ..+ ...++.+.
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~-~~~~~~~~ 87 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEW-SENFASQP 87 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCC-SBSSCBHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCc-cccCCCHH
Confidence 46999999999999999999 899999999999999999999999999999999998875443 233 47788999
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
++.+|++.+++++++.++++++++|+++++. + ..+.|+|++.++. ++.||+||+|||.. +
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~--~------------~~~~w~V~~~~G~-----~~~ad~lV~AtG~~-s 147 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYV--E------------NDRLWEVTLDNEE-----VVTCRFLISATGPL-S 147 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEE--G------------GGTEEEEEETTTE-----EEEEEEEEECCCSC-B
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEe--C------------CCCEEEEEECCCC-----EEEeCEEEECcCCC-C
Confidence 9999999999999998889999999999984 1 1578999887654 78999999999987 4
Q ss_pred CCCCCCCCCCCCCCcccceEEeccccCccch-hhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 158 VPIIPAFPNNKGPEVFEGQVLHSIDYCKLDK-EAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 158 ~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~-~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+.|++| |.+.|.|..+|+..|..... ........+|+|+|||+|.||+|+|.+|++.+. +||+++|++.
T Consensus 148 ~p~~p~ip---G~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~-----~Vtv~~r~~~ 219 (545)
T 3uox_A 148 ASRMPDIK---GIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAK-----ELYVFQRTPN 219 (545)
T ss_dssp C---CCCT---TGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBS-----EEEEEESSCC
T ss_pred CCcCCCCC---CccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCC-----EEEEEEcCCC
Confidence 89999999 99999999999998865200 000034678999999999999999999998765 4999999999
Q ss_pred eeecCcccCCccchhhhhh----hhhhhh---cC-----------C-----Cch---hHHHHH---------HHh-----
Q 010421 237 WTVPHYRIWGLPFFMFYST----RFSQFL---HG-----------S-----PNQ---SLLRTL---------LCL----- 276 (511)
Q Consensus 237 ~~~p~~~~~g~p~~~~~~~----r~~~~~---~~-----------~-----~~~---~~~~~~---------~~~----- 276 (511)
|++|... .++...... ++...+ .. + +.+ ..+... +..
T Consensus 220 ~i~p~~~---~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~ 296 (545)
T 3uox_A 220 WCTPLGN---SPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLL 296 (545)
T ss_dssp CCEECCC---CBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTT
T ss_pred ccccCCc---CCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhh
Confidence 9999875 222221111 111110 00 0 000 000000 000
Q ss_pred hhhhhHHHHHHHHHHHHhccCC--cccCCCCC-CCccccccccccccccCCchhhhhccCeEEEE---eCceeEEeCCcE
Q 010421 277 LLSPLRRGVSKFIESYLLWKLP--LLKYGLKP-DHPFEEDYASCQMAIMPEGFFSEAEKGKIVFK---RASKWWFWKGGL 350 (511)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~~v 350 (511)
..+.....+..++...+..++. ..+..|.| ++++ +|+++.++++|++++++++|+++ .+.|++++++||
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv 371 (545)
T 3uox_A 297 LNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPF-----GAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGI 371 (545)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCT-----TSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEE
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeE
Confidence 0022334455556666655543 34466889 6876 99999999999999999999999 577999999999
Q ss_pred EEcCCceeeccEEEEecCCCCcccccc---cCCCcccccccCCCCcccceeeecCCCCCceEEE-eeccc---chhhhhH
Q 010421 351 EFEDNTKLEADVVILCTGYDGKKKLKA---FLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFV-GYIES---VSNLHTA 423 (511)
Q Consensus 351 ~~~dG~~~~~D~VI~aTG~~~~~~~~~---~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~~---~~~~~~~ 423 (511)
+++|| ++++|+||+||||++...+.. +.+.++..+.+.+......|+++..+++||+|++ |+..+ .+.+..+
T Consensus 372 ~~~dG-~~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~ 450 (545)
T 3uox_A 372 KTADA-AYDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCG 450 (545)
T ss_dssp EESSC-EEECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHH
T ss_pred EeCCC-eeecCEEEECCccccccccCCCceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHH
Confidence 99999 999999999999997643221 1222233333345557789999999999999998 44432 2445789
Q ss_pred HHHHHHHHHHhc
Q 010421 424 ELRSIWLSRLID 435 (511)
Q Consensus 424 e~qa~~~a~~l~ 435 (511)
|.|++|++++|.
T Consensus 451 e~~~~~i~~~i~ 462 (545)
T 3uox_A 451 GLQAEWVLRMIS 462 (545)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999884
No 4
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.5e-49 Score=410.12 Aligned_cols=359 Identities=24% Similarity=0.393 Sum_probs=286.3
Q ss_pred CeEEEECCCHHHHHHHHhc-c----CCC---cEEEcCCCCcCccccCC---------------CcCceeccCCCCccccC
Q 010421 5 SKIAIIGAGVSGLAAVKQL-R----HHN---PVVFEASDSIGGIWKSC---------------SYNSTKLQSHRSDYEFT 61 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l-~----g~~---v~v~e~~~~~GG~w~~~---------------~~~~~~~~~~~~~~~~~ 61 (511)
+||+|||||++|+++|+.| . |++ |+|||+++.+||+|... .|+.+..+.++..+.|+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 7999999999999999999 4 788 99999999999999863 36667788888889999
Q ss_pred CCCCCCC---CCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCC
Q 010421 62 DFPWPNR---DDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSN 138 (511)
Q Consensus 62 ~~~~~~~---~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 138 (511)
+++++.. ....++++.++.+|++++++++++...++++++|+++++.. +.+.|+|++.+..++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~--------------~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE--------------DSQTFTVTVQDHTTD 148 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET--------------TTTEEEEEEEETTTT
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC--------------CCCcEEEEEEEcCCC
Confidence 9887532 12678899999999999999999966699999999999841 145899999875444
Q ss_pred ceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHH
Q 010421 139 SIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAE 218 (511)
Q Consensus 139 ~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~ 218 (511)
+..++.||+||+|||++ +.|+.|.+| |.+.|.|.++|+.+|+.. ..+.+|+|+|||+|.||+|+|.+|++
T Consensus 149 ~~~~~~~d~VVvAtG~~-s~p~~p~ip---G~~~~~g~~~hs~~~~~~------~~~~~k~VvVVG~G~sg~eiA~~l~~ 218 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHF-STPYVPEFE---GFEKFGGRILHAHDFRDA------LEFKDKTVLLVGSSYSAEDIGSQCYK 218 (464)
T ss_dssp EEEEEEESEEEECCCSS-SSBCCCCCB---TTTTCCSEEEEGGGCCCG------GGGTTSEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCCC-CCCccCCCC---CcccCCceEEehhhhCCH------hHcCCCEEEEEcCCCCHHHHHHHHHH
Confidence 44578999999999998 589999999 888899999999999863 44689999999999999999999999
Q ss_pred hcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCC
Q 010421 219 SNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLP 298 (511)
Q Consensus 219 ~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (511)
.+.+ |+++.|++.. ++..
T Consensus 219 ~g~~-----V~li~~~~~~-~~~~-------------------------------------------------------- 236 (464)
T 2xve_A 219 YGAK-----KLISCYRTAP-MGYK-------------------------------------------------------- 236 (464)
T ss_dssp TTCS-----EEEEECSSCC-CCCC--------------------------------------------------------
T ss_pred hCCe-----EEEEEECCCC-CCCC--------------------------------------------------------
Confidence 8765 9999987641 1000
Q ss_pred cccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCceeEEeCCcEEEcCCceeeccEEEEecCCCCccccccc
Q 010421 299 LLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRASKWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAF 378 (511)
Q Consensus 299 ~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~ 378 (511)
+ ..+|+++ ..|.++++++|+++||+++++|.||+||||++++++++
T Consensus 237 -------------------------------~-~~~V~~~-~~V~~i~~~~V~~~dG~~i~~D~Vi~atG~~p~~~~l~- 282 (464)
T 2xve_A 237 -------------------------------W-PENWDER-PNLVRVDTENAYFADGSSEKVDAIILCTGYIHHFPFLN- 282 (464)
T ss_dssp -------------------------------C-CTTEEEC-SCEEEECSSEEEETTSCEEECSEEEECCCBCCCCTTBC-
T ss_pred -------------------------------C-CCceEEc-CCeEEEeCCEEEECCCCEEeCCEEEECCCCCCCCCCcC-
Confidence 0 1245555 55888888899999999999999999999999987643
Q ss_pred CCCcccccccCCCCc-ccceeeecCCCCCceEEEeecccchhhhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Q 010421 379 LPEPFQSLLEHPSGL-LPLYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLSRLIDDKFKLPSAEKMLEQTSKEMEVM 457 (511)
Q Consensus 379 ~~~~~~~~~~~~~~~-~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a~~l~g~~~lp~~~~~~~~~~~~~~~~ 457 (511)
.. .++..+..+. ..+|++++.++.|||||+|.+.....++.+|.||+|+|++|.|+.+||+.++|.+++.++.+.
T Consensus 283 --~~-~gl~~~~~~~v~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~~~lP~~~~m~~~~~~~~~~- 358 (464)
T 2xve_A 283 --DD-LRLVTNNRLWPLNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGRLPLPSKEEMKADSMAWREK- 358 (464)
T ss_dssp --TT-TCCCCCSSSCCSSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHH-
T ss_pred --cc-cccccCCCcccccccceEecCCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHH-
Confidence 11 1111122212 368998888999999999998776678999999999999999999999999999988777552
Q ss_pred HHhccc--cCCcceeeeccccHHHHHHhhCCCCCCc
Q 010421 458 KQSTRF--YKRHCISTFSINHSDEICEEMGWNAWRK 491 (511)
Q Consensus 458 ~~~~~~--~~~~~~~~~~~~y~d~l~~~~g~~~~~~ 491 (511)
.+ .+ ..++. .....|+|+|++++|+++.++
T Consensus 359 ~~--~~~~~~~~~--~~~~~Y~~~l~~~~g~~~~~~ 390 (464)
T 2xve_A 359 EL--TLVTAEEMY--TYQGDYIQNLIDMTDYPSFDI 390 (464)
T ss_dssp HH--TCCSHHHHH--HHHHHHHHHHHTTSSSCCCCH
T ss_pred hh--ccCCCCCcc--ccHHHHHHHHHHHcCCCCCCh
Confidence 11 11 11111 013579999999999998755
No 5
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1.2e-48 Score=411.40 Aligned_cols=430 Identities=21% Similarity=0.312 Sum_probs=312.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCC----CCCCCCCCCChH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPW----PNRDDPGFPSYT 77 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 77 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||+|..+.||++.++++...++++..|. ..+ ...++.+.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~-~~~~~~~~ 94 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNW-TERYASQP 94 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCC-CBSSCBHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCc-ccccCCHH
Confidence 47999999999999999999 899999999999999999998999999999998888774431 122 36788999
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
++.+|++.+++++++..+++++++|+++++.. ..+.|+|++.++. ++.||+||+|||.. +
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------~~~~w~V~~~~G~-----~~~ad~vV~AtG~~-s 154 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDE--------------ATNTWTVDTNHGD-----RIRARYLIMASGQL-S 154 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEET--------------TTTEEEEEETTCC-----EEEEEEEEECCCSC-C
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcC--------------CCCeEEEEECCCC-----EEEeCEEEECcCCC-C
Confidence 99999999999999877899999999999841 1467999886554 78999999999998 5
Q ss_pred CCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCce
Q 010421 158 VPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 158 ~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~ 237 (511)
.|.+|++| |.+.|.|.++|+..|... ...+.+|+|+|||+|.||+|+|..|+..+.+ |+++.|++.|
T Consensus 155 ~p~~p~i~---G~~~f~G~~~hs~~~~~~-----~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~-----vtv~~r~~~~ 221 (542)
T 1w4x_A 155 VPQLPNFP---GLKDFAGNLYHTGNWPHE-----PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAE-----LFVFQRTPHF 221 (542)
T ss_dssp CCCCCCCT---TGGGCCSEEEEGGGCCSS-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBSE-----EEEEESSCCC
T ss_pred CCCCCCCC---CcccCCCceEECCCCCCc-----hhccCCCEEEEECCCccHHHHHHHHhhcCce-----EEEEEcCCcc
Confidence 89999999 888899999999988731 1346899999999999999999999998754 9999999999
Q ss_pred eecCcccCCccchhhhh----hhh---hhhhcC-----------CC----c----hhHHHHHHHh-----------h--h
Q 010421 238 TVPHYRIWGLPFFMFYS----TRF---SQFLHG-----------SP----N----QSLLRTLLCL-----------L--L 278 (511)
Q Consensus 238 ~~p~~~~~g~p~~~~~~----~r~---~~~~~~-----------~~----~----~~~~~~~~~~-----------~--~ 278 (511)
++|... .++..... ..+ ...... .| . ..++...... + .
T Consensus 222 ~~p~~~---~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~ 298 (542)
T 1w4x_A 222 AVPARN---APLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRD 298 (542)
T ss_dssp EEECCC---CBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTC
T ss_pred cccCCC---CCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcC
Confidence 888754 12211110 000 000000 00 0 0111111000 0 0
Q ss_pred hhhHHHHHHHHHHHHhccCC--cccCCCCC-CCccccccccccccccCCchhhhhccCeEEEE---eCceeEEeCCcEEE
Q 010421 279 SPLRRGVSKFIESYLLWKLP--LLKYGLKP-DHPFEEDYASCQMAIMPEGFFSEAEKGKIVFK---RASKWWFWKGGLEF 352 (511)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~p-~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~---~~~i~~~~~~~v~~ 352 (511)
......+.+++...+..++. ..+..|.| ++++ +|++++++++|++++++++|+++ ...|.++++++|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~-----~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~ 373 (542)
T 1w4x_A 299 RDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF-----GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRT 373 (542)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS-----SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEE
T ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc-----cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEe
Confidence 11233444555555555442 34556788 5765 99999999999999999999998 56799999999999
Q ss_pred cCCceeeccEEEEecCCCCcccccccC---CCcccccccCCCCcccceeeecCCCCCceEEE-eeccc---chhhhhHHH
Q 010421 353 EDNTKLEADVVILCTGYDGKKKLKAFL---PEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFV-GYIES---VSNLHTAEL 425 (511)
Q Consensus 353 ~dG~~~~~D~VI~aTG~~~~~~~~~~~---~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~i-G~~~~---~~~~~~~e~ 425 (511)
+| +++++|+||+||||+++..+..-+ +.++..+.+.+......|+++.++++||+|++ |...+ .+....+|.
T Consensus 374 ~d-~~~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~ 452 (542)
T 1w4x_A 374 SE-REYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQ 452 (542)
T ss_dssp SS-CEEECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHH
T ss_pred CC-eEEecCEEEEcCCccccccCcCceeeECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHH
Confidence 99 899999999999999864433212 12222222233455679999999999999998 87642 233478999
Q ss_pred HHHHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHhccccCCcceeeeccccHHH
Q 010421 426 RSIWLSRLIDDKF--KLPSAEKMLEQTSKEMEVMKQSTRFYKRHCISTFSINHSDE 479 (511)
Q Consensus 426 qa~~~a~~l~g~~--~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~ 479 (511)
|++|++++|.... ...+.+.+.+..++|.+.+++.. .+..+..|.+||++.
T Consensus 453 q~~~ia~~i~~~~~~~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~swy~~~ 505 (542)
T 1w4x_A 453 HVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIA---DETLYPMTASWYTGA 505 (542)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEECHHHHHHHHHHHHHHH---TTSSGGGCGGGSSSC
T ss_pred HHHHHHHHHHHHHHCCCeEEEECHHHHHHHHHHHHHHH---hCCCcCCCCcCccCC
Confidence 9999999885321 23344444454556665555433 122233579999874
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1.3e-45 Score=379.99 Aligned_cols=356 Identities=24% Similarity=0.362 Sum_probs=274.2
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCCCcCccccCCC--------------------------------
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASDSIGGIWKSCS-------------------------------- 45 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~~~GG~w~~~~-------------------------------- 45 (511)
.+.+||+|||||++|+++|..| .|. +|+|||+++.+||+|....
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 3568999999999999999999 788 9999999999999998732
Q ss_pred -cCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCC
Q 010421 46 -YNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAG 124 (511)
Q Consensus 46 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~ 124 (511)
|..+..+.++..+.|++++++... ..|+++.++.+|+++++++++. .++++++|++++..
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~---------------- 144 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQT-LQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKK---------------- 144 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTTC-CSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEE----------------
T ss_pred hhhhhccCCCHHHhccCCCCCCCCC-CCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeC----------------
Confidence 223344555666778888888763 7889999999999999998865 79999999999873
Q ss_pred CCceEEEEEeCCCCc-eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcc----cceEEeccccCccchhhhhhccCCCc
Q 010421 125 HPVWEVAVQTHNSNS-IQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVF----EGQVLHSIDYCKLDKEAASQLLKDKK 199 (511)
Q Consensus 125 ~~~~~v~~~~~~~~~-~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~----~g~~~hs~~~~~~~~~~~~~~~~~k~ 199 (511)
++.|+|++.+..+++ ..++.||+||+|||++ +.|++|.+| |.+.| .|.++|+.+|++. ..+.+|+
T Consensus 145 ~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~-s~p~~p~i~---G~~~~~~~~~g~v~~~~~~~~~------~~~~~k~ 214 (447)
T 2gv8_A 145 DGSWVVTYKGTKAGSPISKDIFDAVSICNGHY-EVPYIPNIK---GLDEYAKAVPGSVLHSSLFREP------ELFVGES 214 (447)
T ss_dssp TTEEEEEEEESSTTCCEEEEEESEEEECCCSS-SSBCBCCCB---THHHHHHHSTTSEEEGGGCCCG------GGGTTCC
T ss_pred CCeEEEEEeecCCCCeeEEEEeCEEEECCCCC-CCCCCCCCC---ChhhhhccCCccEEEecccCCh------hhcCCCE
Confidence 567999988733233 3468999999999998 489999998 76654 5789999999873 4468999
Q ss_pred EEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhh
Q 010421 200 VAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLS 279 (511)
Q Consensus 200 V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 279 (511)
|+|||+|.||+|+|.+|++.+.+ .|+++.|++.+
T Consensus 215 VvVvG~G~sg~e~A~~l~~~~~~----~V~l~~r~~~~------------------------------------------ 248 (447)
T 2gv8_A 215 VLVVGGASSANDLVRHLTPVAKH----PIYQSLLGGGD------------------------------------------ 248 (447)
T ss_dssp EEEECSSHHHHHHHHHHTTTSCS----SEEEECTTCCS------------------------------------------
T ss_pred EEEEccCcCHHHHHHHHHHHhCC----cEEEEeCCCCc------------------------------------------
Confidence 99999999999999999887531 39999987643
Q ss_pred hhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCceeEEe--CCcEEEcCCce
Q 010421 280 PLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRASKWWFW--KGGLEFEDNTK 357 (511)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~--~~~v~~~dG~~ 357 (511)
+.+.+|.+ ...|.++. +++|+++||+.
T Consensus 249 --------------------------------------------------l~~~~i~~-~~~v~~~~~~~~~v~~~dG~~ 277 (447)
T 2gv8_A 249 --------------------------------------------------IQNESLQQ-VPEITKFDPTTREIYLKGGKV 277 (447)
T ss_dssp --------------------------------------------------CBCSSEEE-ECCEEEEETTTTEEEETTTEE
T ss_pred --------------------------------------------------CCCCCeEE-ecCeEEEecCCCEEEECCCCE
Confidence 11123442 23467774 45799999987
Q ss_pred -eeccEEEEecCCCCcccc-----cccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccchhhhhHHHHHHHHH
Q 010421 358 -LEADVVILCTGYDGKKKL-----KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLS 431 (511)
Q Consensus 358 -~~~D~VI~aTG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a 431 (511)
+++|.||+||||++++++ ++.+. ..+..+......+|+++++++.|+|||+|.+.....++.++.||+|+|
T Consensus 278 ~~~~D~vi~atG~~~~~~~l~~~~l~~~~---~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~~~~~~~~a~~qa~~~a 354 (447)
T 2gv8_A 278 LSNIDRVIYCTGYLYSVPFPSLAKLKSPE---TKLIDDGSHVHNVYQHIFYIPDPTLAFVGLALHVVPFPTSQAQAAFLA 354 (447)
T ss_dssp ECCCSEEEECCCBCCCCCCHHHHSCCSTT---TCCCSSSSSCCSEETTTEETTCTTEEESSCCBSSCHHHHHHHHHHHHH
T ss_pred eccCCEEEECCCCCcCCCCCccccccccc---CceecCCCcccccccccccCCCCcEEEEeccccccCchHHHHHHHHHH
Confidence 799999999999999876 43221 112222223356899999999999999998877667889999999999
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHHHhccccCCccee-eeccccHHHHHHhhCCCC
Q 010421 432 RLIDDKFKLPSAEKMLEQTSKEMEVMKQSTRFYKRHCIS-TFSINHSDEICEEMGWNA 488 (511)
Q Consensus 432 ~~l~g~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~d~l~~~~g~~~ 488 (511)
++|.|+.+||+.++|.+++.+..+..+.....+ |.+. .+...|+|+|++.+|..+
T Consensus 355 ~~~~g~~~lp~~~~m~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~~l~~~~~~~~ 410 (447)
T 2gv8_A 355 RVWSGRLKLPSKEEQLKWQDELMFSLSGANNMY--HSLDYPKDATYINKLHDWCKQAT 410 (447)
T ss_dssp HHHTTSSCCCCHHHHHHHHHHHHHHHTTCGGGT--TBCTTTHHHHHHHHHHHHHHTCS
T ss_pred HHHcCCCCCcCHHHHHHHHHHHHHHhcCCCcce--eecCCccHHHHHHHHHHHhCccc
Confidence 999999999999999987766543211111111 3332 345789999999998764
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=5.9e-37 Score=305.89 Aligned_cols=341 Identities=21% Similarity=0.277 Sum_probs=252.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||.|.. .|+.+.+..+...+.+++++.+.+ ...++++.++.+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPAS-QGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCC-SSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCC-ccCCCCHHHHHH
Confidence 57999999999999999999 89999999999999999998 999999999999999999888866 378889999999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
|+.++++++++ .++++++|++++.. ++.|. |++.++ ++.||+||+|||.. ..|.
T Consensus 81 ~l~~~~~~~~~--~~~~~~~v~~i~~~----------------~~~~~~v~~~~g------~~~~d~vV~AtG~~-~~~~ 135 (357)
T 4a9w_A 81 YLAQYEQKYAL--PVLRPIRVQRVSHF----------------GERLRVVARDGR------QWLARAVISATGTW-GEAY 135 (357)
T ss_dssp HHHHHHHHTTC--CEECSCCEEEEEEE----------------TTEEEEEETTSC------EEEEEEEEECCCSG-GGBC
T ss_pred HHHHHHHHcCC--EEEcCCEEEEEEEC----------------CCcEEEEEeCCC------EEEeCEEEECCCCC-CCCC
Confidence 99999999998 79999999999983 45677 664432 78999999999987 4888
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
+|.+| |.+.+.+..+|+..+... ..+.+++|+|||+|.+|+|+|..|++.+ +|+++.|++.+++|
T Consensus 136 ~~~~~---g~~~~~~~~~~~~~~~~~------~~~~~~~v~VvG~G~~g~e~a~~l~~~~------~v~~v~~~~~~~~~ 200 (357)
T 4a9w_A 136 TPEYQ---GLESFAGIQLHSAHYSTP------APFAGMRVAIIGGGNSGAQILAEVSTVA------ETTWITQHEPAFLA 200 (357)
T ss_dssp CCCCT---TGGGCCSEEEEGGGCCCS------GGGTTSEEEEECCSHHHHHHHHHHTTTS------EEEEECSSCCCBCC
T ss_pred CCCCC---CccccCCcEEEeccCCCh------hhcCCCEEEEECCCcCHHHHHHHHHhhC------CEEEEECCCCeecc
Confidence 88888 888888999999988763 4468899999999999999999998774 39999999766666
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
... .+..+. ....+.+.. . ....+.+... ..+...
T Consensus 201 ~~~-~~~~~~----~~~~~~~~~----------------------------~-------~~~~~~~~~~-----~~~~~~ 235 (357)
T 4a9w_A 201 DDV-DGRVLF----ERATERWKA----------------------------Q-------QEGREPDLPP-----GGFGDI 235 (357)
T ss_dssp TTC-CTHHHH----TC--------------------------------------------------------------CB
T ss_pred hhh-cCccHH----HHHHHHHhc----------------------------c-------ccccCCCccc-----ccccCc
Confidence 542 010000 000000000 0 0000000000 011122
Q ss_pred ccCCchhhhhccCeEEEEeCceeEEeCCcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceee-
Q 010421 321 IMPEGFFSEAEKGKIVFKRASKWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRG- 399 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~- 399 (511)
.+.+.+.+.++.+.+.. ...+.+++.++|+++||+++++|.||+|||++++.++++.++ +. .+++.+.+...
T Consensus 236 ~~~~~~~~~~~~g~i~~-~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~~l~~~g-----l~-~~~G~i~vd~~~ 308 (357)
T 4a9w_A 236 VMVPPVLDARARGVLAA-VPPPARFSPTGMQWADGTERAFDAVIWCTGFRPALSHLKGLD-----LV-TPQGQVEVDGSG 308 (357)
T ss_dssp CCCHHHHHHHHTTCCCE-ECCCSEEETTEEECTTSCEEECSEEEECCCBCCCCGGGTTTT-----CB-CTTSCBCBCTTS
T ss_pred ccChhHHHHHhcCceEE-ecCcceEeCCeeEECCCCEecCCEEEECCCcCCCCcccCccc-----cc-CCCCCccccCCc
Confidence 34455566677776443 345788999999999999999999999999999977643221 11 34455656655
Q ss_pred ecCCCCCceEEEe--eccc--chhhhhHHHHHHHHHHHhcCCC
Q 010421 400 TIHPLIPNMAFVG--YIES--VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 400 ~~~~~~pnl~~iG--~~~~--~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+..++.||+|++| .... ......+..||+.+|..+...+
T Consensus 309 l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l 351 (357)
T 4a9w_A 309 LRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYC 351 (357)
T ss_dssp CBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 4668899999999 4443 2345568888888888765443
No 8
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=2.9e-34 Score=298.51 Aligned_cols=328 Identities=18% Similarity=0.247 Sum_probs=197.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC--------------CCcEEEcCCCCcCccccCC-CcCceeccCC--C---------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH--------------HNPVVFEASDSIGGIWKSC-SYNSTKLQSH--R--------- 55 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g--------------~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~--~--------- 55 (511)
.+||+||||||+||++|..| .+ ...+.+|+.+.++ |+.+ .||+.+++++ +
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 47999999999999999988 32 3456788877775 7654 4888888875 2
Q ss_pred CccccCC--------CCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc
Q 010421 56 SDYEFTD--------FPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV 127 (511)
Q Consensus 56 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 127 (511)
.-++|.. ++|+.+ ...|+++.|+.+||++++++++. .++|+++|++|++...+..+ ...+.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~-~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~~~~~~--------~~~~~ 185 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNL-STFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGKSDPSS--------SVVDF 185 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTT-CCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEECSSTTS--------SCBCE
T ss_pred CccchHHHHHHhCCccCCccc-cCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeeccccccccc--------cccce
Confidence 2222211 123333 47899999999999999999876 89999999999985321100 01356
Q ss_pred eEEEEEeCCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCC
Q 010421 128 WEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKK 207 (511)
Q Consensus 128 ~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~ 207 (511)
|+|++.++.+++..++.|++||+||| ..|.+|+++ .|.|+++|+.+|...........++||||+|||+|.
T Consensus 186 ~~V~~~~~~~g~~~~~~ar~vVlatG---~~P~iP~~~------~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~ 256 (501)
T 4b63_A 186 FTVRSRNVETGEISARRTRKVVIAIG---GTAKMPSGL------PQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQ 256 (501)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCC---CEECCCTTS------CCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSH
T ss_pred EEEEEecCCCceEEEEEeCEEEECcC---CCCCCCCCC------CCCcceeeccccccchhhccccccCCcEEEEECCcH
Confidence 99999998878878899999999999 467776543 467899999999753322223458999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCcEEEEEecCceeecCcccCCccchh-hhhhhhhhhhcCCCchhHHHHHHH--h-hhhh-hH
Q 010421 208 SAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFM-FYSTRFSQFLHGSPNQSLLRTLLC--L-LLSP-LR 282 (511)
Q Consensus 208 sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~-~~~~r~~~~~~~~~~~~~~~~~~~--~-~~~~-~~ 282 (511)
||+|++.+|++.... .+|++++|++.|+ |... .|+.. .+...+...+...+.......... . .... ..
T Consensus 257 SA~ei~~~L~~~~~~---~~v~~~~R~~~~~-p~~~---s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~ 329 (501)
T 4b63_A 257 SAAEIFHDLQKRYPN---SRTTLIMRDSAMR-PSDD---SPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRL 329 (501)
T ss_dssp HHHHHHHHHHHHSTT---CEEEEECSSSSCC-BCCC---CTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCH
T ss_pred HHHHHHHHHHhcCCC---ceEEEEeCCCccc-cccc---cccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCH
Confidence 999999999986432 4699999998764 4332 22221 112222223333332111110000 0 0000 01
Q ss_pred HHHHHHHHHHHhccCC-----cccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCceeEEeCCcEEEcCCce
Q 010421 283 RGVSKFIESYLLWKLP-----LLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRASKWWFWKGGLEFEDNTK 357 (511)
Q Consensus 283 ~~~~~~~~~~~~~~~~-----~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~~v~~~dG~~ 357 (511)
..+.......+...+. ...+++.|...+ .. .......++++++.. +.+++++++++.||++
T Consensus 330 ~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v-----------~~--~~~~~~~~~~~v~~~-~~~~~~~~v~~~dg~~ 395 (501)
T 4b63_A 330 ELIEEIYNDMYLQRVKNPDETQWQHRILPERKI-----------TR--VEHHGPQSRMRIHLK-SSKPESEGAANDVKET 395 (501)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEE-----------EE--EECCSSSSCEEEEEE-ESCC--------CCCE
T ss_pred HHHHHHHHHHHhhccCCCcccccceeecCCcce-----------ee--eeecCCCCeEEEEee-eeEEeCCeeEeCCCeE
Confidence 1111111111111110 001111111100 00 001123445555432 4567788999999999
Q ss_pred eeccEEEEecCCCCccc
Q 010421 358 LEADVVILCTGYDGKKK 374 (511)
Q Consensus 358 ~~~D~VI~aTG~~~~~~ 374 (511)
+++|+||+||||+++.+
T Consensus 396 ~~~D~VI~ATGy~~~~p 412 (501)
T 4b63_A 396 LEVDALMVATGYNRNAH 412 (501)
T ss_dssp EEESEEEECCCEECCTH
T ss_pred EECCEEEECcCCCCCCc
Confidence 99999999999998853
No 9
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=2.3e-32 Score=274.22 Aligned_cols=320 Identities=19% Similarity=0.268 Sum_probs=213.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCCCcCccccCCCcCceeccCCCCc---cccCCCCCC--CCC-----C
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASDSIGGIWKSCSYNSTKLQSHRSD---YEFTDFPWP--NRD-----D 70 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~-----~ 70 (511)
.+||+|||||++|+++|..| .|. +|+|||+++ +||+|.. ......+..+... +.+.++..+ ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH-WPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT-SCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc-CcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 57999999999999999999 888 999999988 9999875 2222222222211 111111111 100 1
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEE
Q 010421 71 PGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVV 150 (511)
Q Consensus 71 ~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVl 150 (511)
..++.+.++.+|+..+++++++ .++++++|++++.. ++.|.|.+.++ ++.||+||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~g------~~~~d~vVl 137 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYEL--NIFENTVVTNISAD----------------DAYYTIATTTE------TYHADYIFV 137 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEC----------------SSSEEEEESSC------CEEEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEC----------------CCeEEEEeCCC------EEEeCEEEE
Confidence 3467788999999999999998 78999999999973 44688876443 588999999
Q ss_pred eecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEE
Q 010421 151 CTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTM 230 (511)
Q Consensus 151 AtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl 230 (511)
|||+.+ . |.+| + +.++|+..+... ..+.+++|+|||+|.+|+|+|..|++.+. +|++
T Consensus 138 AtG~~~-~---p~ip---~-----~~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~a~~l~~~g~-----~V~l 194 (369)
T 3d1c_A 138 ATGDYN-F---PKKP---F-----KYGIHYSEIEDF------DNFNKGQYVVIGGNESGFDAAYQLAKNGS-----DIAL 194 (369)
T ss_dssp CCCSTT-S---BCCC---S-----SSCEEGGGCSCG------GGSCSSEEEEECCSHHHHHHHHHHHHTTC-----EEEE
T ss_pred CCCCCC-c---cCCC---C-----CceechhhcCCh------hhcCCCEEEEECCCcCHHHHHHHHHhcCC-----eEEE
Confidence 999762 3 4455 4 356788877652 34578899999999999999999998865 4999
Q ss_pred EEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcc
Q 010421 231 IVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPF 310 (511)
Q Consensus 231 ~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 310 (511)
+.|++.+..|..+.. ..+. ..
T Consensus 195 v~~~~~~~~~~~d~~-~~~~----~~------------------------------------------------------ 215 (369)
T 3d1c_A 195 YTSTTGLNDPDADPS-VRLS----PY------------------------------------------------------ 215 (369)
T ss_dssp ECC----------CT-TSCC----HH------------------------------------------------------
T ss_pred EecCCCCCCCCCCCC-ccCC----HH------------------------------------------------------
Confidence 999887553322100 0000 00
Q ss_pred ccccccccccccCCchhhhhccC-eEEEEeCc-eeEE--eCCc--EEEcCCceee-ccEEEEecCCCCcccccccCCCcc
Q 010421 311 EEDYASCQMAIMPEGFFSEAEKG-KIVFKRAS-KWWF--WKGG--LEFEDNTKLE-ADVVILCTGYDGKKKLKAFLPEPF 383 (511)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~g-~v~v~~~~-i~~~--~~~~--v~~~dG~~~~-~D~VI~aTG~~~~~~~~~~~~~~~ 383 (511)
..+.+.+.+++. +|+++.+. |.++ ++++ |++.||+++. +|.||+|||++++..+.. ..
T Consensus 216 -----------~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~~~~~---~~- 280 (369)
T 3d1c_A 216 -----------TRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIV---QQ- 280 (369)
T ss_dssp -----------HHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGGSHHH---HH-
T ss_pred -----------HHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCccchhh---hh-
Confidence 000111234555 48888774 7777 4443 6788998865 699999999999874321 00
Q ss_pred cccccCCCCcccceeeecCCCCCceEEEeecccc-----hhhhhHHHHHHHHHHHhcCCCCCCCHHHHHH
Q 010421 384 QSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-----SNLHTAELRSIWLSRLIDDKFKLPSAEKMLE 448 (511)
Q Consensus 384 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----~~~~~~e~qa~~~a~~l~g~~~lp~~~~~~~ 448 (511)
.....++.+.+......++.||||++|..... ..+..++.||+++|+.|.++..+|+.++|.+
T Consensus 281 --~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l~~~~~~p~~~~~~~ 348 (369)
T 3d1c_A 281 --LFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLLTQREGLPAKQEVIE 348 (369)
T ss_dssp --HSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHHHHHTTCCCCHHHHH
T ss_pred --hccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHHhcccCCCCcchHHH
Confidence 11123344556655566788999999975432 1234688999999999999999998765543
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=2.2e-30 Score=255.73 Aligned_cols=289 Identities=17% Similarity=0.151 Sum_probs=209.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||.|.. .||...+. .++. .......++..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~------~~~~--------~~~~~~~~~~~ 71 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY------DVAG--------FPKIRAQELIN 71 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC------CSTT--------CSSEEHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe------ccCC--------CCCCCHHHHHH
Confidence 37999999999999999999 89999999999999999976 56654431 1111 11235789999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
|+.++++++++ .++++++|++++.. .++.|.|.+.++ ++.||+||+|||..+..|..
T Consensus 72 ~~~~~~~~~~~--~~~~~~~v~~i~~~---------------~~~~~~v~~~~g------~~~~d~vVlAtG~~~~~p~~ 128 (332)
T 3lzw_A 72 NLKEQMAKFDQ--TICLEQAVESVEKQ---------------ADGVFKLVTNEE------THYSKTVIITAGNGAFKPRK 128 (332)
T ss_dssp HHHHHHTTSCC--EEECSCCEEEEEEC---------------TTSCEEEEESSE------EEEEEEEEECCTTSCCEECC
T ss_pred HHHHHHHHhCC--cEEccCEEEEEEEC---------------CCCcEEEEECCC------EEEeCEEEECCCCCcCCCCC
Confidence 99999999987 88999999999983 145788887654 58999999999974226888
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+.|.+..+|+ .+.+. ..+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.. .+.
T Consensus 129 ~~~~---g~~~~~g~~~~~-~~~~~------~~~~~~~v~vvG~g~~~~e~a~~l~~~~~-----~v~~~~~~~~~-~~~ 192 (332)
T 3lzw_A 129 LELE---NAEQYEGKNLHY-FVDDL------QKFAGRRVAILGGGDSAVDWALMLEPIAK-----EVSIIHRRDKF-RAH 192 (332)
T ss_dssp CCCT---TGGGGBTTTEES-SCSCG------GGGBTCEEEEECSSHHHHHHHHHHTTTBS-----EEEEECSSSSC-SSC
T ss_pred CCCC---ChhhccCceEEE-ecCCH------HHcCCCEEEEECCCHhHHHHHHHHHhhCC-----eEEEEEecCcC-Ccc
Confidence 8888 887777777777 55542 34578999999999999999999988765 49999987642 110
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (332)
T 3lzw_A 193 E------------------------------------------------------------------------------- 193 (332)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred H-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEcC-----CceeeccEEEEecCCCCcccccccCCCcccccccCCC
Q 010421 322 MPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFED-----NTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPS 391 (511)
Q Consensus 322 ~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~d-----G~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~ 391 (511)
...+.+++.+|+++.+. +.+++.++ |++++ ++++++|.||+|||++++..+.+.++... ..
T Consensus 194 ---~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~------~~ 264 (332)
T 3lzw_A 194 ---HSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI------EK 264 (332)
T ss_dssp ---HHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE------ET
T ss_pred ---HHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc------cC
Confidence 00112344567777654 77777654 77776 35689999999999999877644332221 22
Q ss_pred CcccceeeecCCCCCceEEEeecc----cchhhhhHHHHHHHHHHHhc
Q 010421 392 GLLPLYRGTIHPLIPNMAFVGYIE----SVSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 392 ~~~~ly~~~~~~~~pnl~~iG~~~----~~~~~~~~e~qa~~~a~~l~ 435 (511)
+.+.+... ..++.||||++|... .+.....+..|++.+|..+.
T Consensus 265 g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 311 (332)
T 3lzw_A 265 NSIVVKST-METNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAK 311 (332)
T ss_dssp TEEECCTT-SBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCC-CceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHH
Confidence 33333332 235789999999875 23345667778887777553
No 11
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=4.6e-30 Score=249.33 Aligned_cols=282 Identities=13% Similarity=0.081 Sum_probs=201.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|..| .|++|+|+|++...++.+.. . .. ++ ........++.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~-~------------~~-----~~---~~~~~~~~~~~~ 60 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH-S------------HG-----FL---GQDGKAPGEIIA 60 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC-C------------CS-----ST---TCTTCCHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh-h------------cC-----Cc---CCCCCCHHHHHH
Confidence 48999999999999999999 89999999997644322211 0 00 11 123456789999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
|+.+++++++. ...++++|+++++. ++.|.|.+.++. ++.||+||+|||. .|+.
T Consensus 61 ~~~~~~~~~~~--v~~~~~~v~~i~~~----------------~~~~~v~~~~g~-----~~~~d~vviAtG~---~~~~ 114 (297)
T 3fbs_A 61 EARRQIERYPT--IHWVEGRVTDAKGS----------------FGEFIVEIDGGR-----RETAGRLILAMGV---TDEL 114 (297)
T ss_dssp HHHHHHTTCTT--EEEEESCEEEEEEE----------------TTEEEEEETTSC-----EEEEEEEEECCCC---EEEC
T ss_pred HHHHHHHhcCC--eEEEEeEEEEEEEc----------------CCeEEEEECCCC-----EEEcCEEEECCCC---CCCC
Confidence 99999988742 23346799999883 456888876654 7999999999994 5777
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|++.+ + |+++.|++. .
T Consensus 115 ~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~-----v~~v~~~~~----~ 175 (297)
T 3fbs_A 115 PEIA---GLRERWGSAVFHCPYCH------GYELDQGKIGVIAASPMAIHHALMLPDWG-E-----TTFFTNGIV----E 175 (297)
T ss_dssp CCCB---TTGGGBTTTEESCHHHH------TGGGTTCEEEEECCSTTHHHHHHHGGGTS-E-----EEEECTTTC----C
T ss_pred CCCC---CchhhcCCeeEEcccCc------chhhcCCEEEEEecCccHHHHHHHhhhcC-c-----EEEEECCCC----C
Confidence 8888 77777666666655543 23467899999999999999999998875 4 999988653 0
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
.
T Consensus 176 ~------------------------------------------------------------------------------- 176 (297)
T 3fbs_A 176 P------------------------------------------------------------------------------- 176 (297)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCchhhhhccCeEEEEeCceeEEeCC-cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCC-cccceee
Q 010421 322 MPEGFFSEAEKGKIVFKRASKWWFWKG-GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSG-LLPLYRG 399 (511)
Q Consensus 322 ~~~~~~~~l~~g~v~v~~~~i~~~~~~-~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~-~~~ly~~ 399 (511)
++.+.+.+++.+|+++...+.+++++ +|+++||+++++|.||+|||++++.++.+.++.+... .+.+ .+.+...
T Consensus 177 -~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~~---~~~G~~i~vd~~ 252 (297)
T 3fbs_A 177 -DADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVEE---GPMGSTIVTDPM 252 (297)
T ss_dssp -CHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEEE---ETTEEEECCCTT
T ss_pred -CHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCcccc---CCCCceEEeCCC
Confidence 01112345556677776668888877 7999999999999999999999987654322221110 1122 2333333
Q ss_pred ecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhc
Q 010421 400 TIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 400 ~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~ 435 (511)
..++.||+|++|.... +.....+..|++.+|..+.
T Consensus 253 -~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~ 288 (297)
T 3fbs_A 253 -KQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAH 288 (297)
T ss_dssp -CBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHH
T ss_pred -CccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHH
Confidence 3467899999998776 5556788889998888664
No 12
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=1.9e-30 Score=256.77 Aligned_cols=295 Identities=18% Similarity=0.186 Sum_probs=203.6
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
++.+||+|||||++|+++|..| .|++|+|||+++.+||.|.. .+|...+ +.++.+ ......++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~------~~~~~~--------~~~~~~~~ 67 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA-LYPEKYI------YDVAGF--------PKVYAKDL 67 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH-TCTTSEE------CCSTTC--------SSEEHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec-cCCCcee------eccCCC--------CCCCHHHH
Confidence 3458999999999999999999 89999999999999999976 4544321 111111 12346788
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
.+|+.++++++++ .++++++|+.++.. ++.|+|.+.++. ++.||+||+|||..+..|
T Consensus 68 ~~~l~~~~~~~~~--~~~~~~~v~~i~~~----------------~~~~~v~~~~g~-----~~~~~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 68 VKGLVEQVAPFNP--VYSLGERAETLERE----------------GDLFKVTTSQGN-----AYTAKAVIIAAGVGAFEP 124 (335)
T ss_dssp HHHHHHHHGGGCC--EEEESCCEEEEEEE----------------TTEEEEEETTSC-----EEEEEEEEECCTTSEEEE
T ss_pred HHHHHHHHHHcCC--EEEeCCEEEEEEEC----------------CCEEEEEECCCC-----EEEeCEEEECCCCCCCCC
Confidence 8999999998887 78899999999873 336777765443 789999999999742257
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
..|+++ |.+.+.+.-+|.. +.+ ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 125 ~~~~i~---g~~~~~~~~~~~~-~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~-----~V~~v~~~~~~~- 188 (335)
T 2zbw_A 125 RRIGAP---GEREFEGRGVYYA-VKS------KAEFQGKRVLIVGGGDSAVDWALNLLDTAR-----RITLIHRRPQFR- 188 (335)
T ss_dssp CCCCCT---TTTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS-----EEEEECSSSSCC-
T ss_pred CCCCCC---ChhhccCcEEEEe-cCc------hhhcCCCEEEEECCCHHHHHHHHHHHhhCC-----EEEEEEcCCccC-
Confidence 777777 7666655433322 222 133578999999999999999999987764 499999987521
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
+.. . ..
T Consensus 189 ~~~--------~-----~~------------------------------------------------------------- 194 (335)
T 2zbw_A 189 AHE--------A-----SV------------------------------------------------------------- 194 (335)
T ss_dssp SCH--------H-----HH-------------------------------------------------------------
T ss_pred ccH--------H-----HH-------------------------------------------------------------
Confidence 100 0 00
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEc---CC--ceeeccEEEEecCCCCcccccccCCCcccccccC
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFE---DN--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEH 389 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~---dG--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~ 389 (511)
+.+.+.+++.+|+++.+. +.+++++ +|+++ +| +++++|.||+|||++++.++.+.++.+. +
T Consensus 195 ----~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~-----~ 265 (335)
T 2zbw_A 195 ----KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLAL-----E 265 (335)
T ss_dssp ----HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCE-----E
T ss_pred ----HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceec-----c
Confidence 001123455567777773 7777655 47776 77 5699999999999999876543222211 1
Q ss_pred CCCcccceeeecCCCCCceEEEeeccc----chhhhhHHHHHHHHHHHhc
Q 010421 390 PSGLLPLYRGTIHPLIPNMAFVGYIES----VSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 390 ~~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~~a~~l~ 435 (511)
.+.+.+... +.++.||+|++|.... ......+..|++.+|..+.
T Consensus 266 -~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (335)
T 2zbw_A 266 -KNKIKVDTT-MATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAA 313 (335)
T ss_dssp -TTEEECCTT-CBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred -CCeeeeCCC-CCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHH
Confidence 233333332 2367899999997653 2234567778888777654
No 13
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.97 E-value=5.1e-30 Score=253.80 Aligned_cols=291 Identities=18% Similarity=0.231 Sum_probs=203.1
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcC----CCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCCh
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEA----SDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
+.+||+|||||++|+++|..| .|++|+|+|+ ...+||.|.... ....++.+ ..+...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~~~-------~~~~~~ 83 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFPGF-------PDGLTG 83 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCSTTC-------TTCEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccCCC-------cccCCH
Confidence 458999999999999999999 8999999999 447899887621 00011111 234568
Q ss_pred HHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 77 TEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.++.+|+..+++++++ .+++++ |++++.. .+.|.+.+....++. ++.||+||+|||.
T Consensus 84 ~~~~~~~~~~~~~~gv--~i~~~~-v~~i~~~----------------~~~~~v~~~~~~~~~--~~~~d~vvlAtG~-- 140 (338)
T 3itj_A 84 SELMDRMREQSTKFGT--EIITET-VSKVDLS----------------SKPFKLWTEFNEDAE--PVTTDAIILATGA-- 140 (338)
T ss_dssp HHHHHHHHHHHHHTTC--EEECSC-EEEEECS----------------SSSEEEEETTCSSSC--CEEEEEEEECCCE--
T ss_pred HHHHHHHHHHHHHcCC--EEEEeE-EEEEEEc----------------CCEEEEEEEecCCCc--EEEeCEEEECcCC--
Confidence 8999999999999998 788887 9998873 556777664222222 7899999999995
Q ss_pred CCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 157 DVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 157 ~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|..|.+| |.+.+.+..+|...+.... .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.
T Consensus 141 -~~~~~~~~---g~~~~~~~~~~~~~~~~~~----~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~-----~v~~v~~~~~ 207 (338)
T 3itj_A 141 -SAKRMHLP---GEETYWQKGISACAVCDGA----VPIFRNKPLAVIGGGDSACEEAQFLTKYGS-----KVFMLVRKDH 207 (338)
T ss_dssp -EECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSS-----EEEEECSSSS
T ss_pred -CcCCCCCC---CchhccCccEEEchhcccc----hhhcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEEcCCc
Confidence 56777888 7665555555554432210 114678999999999999999999998765 4999999875
Q ss_pred eeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccc
Q 010421 237 WTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYAS 316 (511)
Q Consensus 237 ~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 316 (511)
+. +.
T Consensus 208 ~~-~~--------------------------------------------------------------------------- 211 (338)
T 3itj_A 208 LR-AS--------------------------------------------------------------------------- 211 (338)
T ss_dssp CC-SC---------------------------------------------------------------------------
T ss_pred cC-CC---------------------------------------------------------------------------
Confidence 21 10
Q ss_pred ccccccCCchhhhh-ccCeEEEEeCc-eeEEeCCc-----EEEcC-----CceeeccEEEEecCCCCcccccccCCCccc
Q 010421 317 CQMAIMPEGFFSEA-EKGKIVFKRAS-KWWFWKGG-----LEFED-----NTKLEADVVILCTGYDGKKKLKAFLPEPFQ 384 (511)
Q Consensus 317 ~~~~~~~~~~~~~l-~~g~v~v~~~~-i~~~~~~~-----v~~~d-----G~~~~~D~VI~aTG~~~~~~~~~~~~~~~~ 384 (511)
+.+.+.+ +..+|+++.+. +.+++.++ |++++ ++++++|.||+|||++++..+.+.
T Consensus 212 -------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~------ 278 (338)
T 3itj_A 212 -------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG------ 278 (338)
T ss_dssp -------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT------
T ss_pred -------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC------
Confidence 0011223 23478888764 77776554 77776 456999999999999998766432
Q ss_pred ccccCCCCcccceeeecCCCCCceEEEeeccc--chhhhhHHHHHHHHHHHhc
Q 010421 385 SLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES--VSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 385 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~~a~~l~ 435 (511)
++..++++.+.+......++.||+|++|.... +.....+..|++.+|..+.
T Consensus 279 ~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 331 (338)
T 3itj_A 279 QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAE 331 (338)
T ss_dssp TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHH
Confidence 12223344443333334567899999998774 3445677788888887654
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.5e-29 Score=248.62 Aligned_cols=282 Identities=15% Similarity=0.163 Sum_probs=203.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|..| .|++|+|+|++ +||.|..... .+.++. .......++.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~----------~~~~~~--------~~~~~~~~~~~ 74 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI----------VDDYLG--------LIEIQASDMIK 74 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE----------ECCSTT--------STTEEHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc----------ccccCC--------CCCCCHHHHHH
Confidence 47999999999999999999 89999999997 8999876110 000111 11245789999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
|+.++++++++ .+++ ++|++++.. ++.|.|.+.++. ++.||+||+|||. .|..
T Consensus 75 ~~~~~~~~~~v--~~~~-~~v~~i~~~----------------~~~~~v~~~~g~-----~~~~d~lvlAtG~---~~~~ 127 (323)
T 3f8d_A 75 VFNKHIEKYEV--PVLL-DIVEKIENR----------------GDEFVVKTKRKG-----EFKADSVILGIGV---KRRK 127 (323)
T ss_dssp HHHHHHHTTTC--CEEE-SCEEEEEEC------------------CEEEEESSSC-----EEEEEEEEECCCC---EECC
T ss_pred HHHHHHHHcCC--EEEE-EEEEEEEec----------------CCEEEEEECCCC-----EEEcCEEEECcCC---CCcc
Confidence 99999999988 7777 899999873 556888776654 7899999999995 5778
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+.|.+..+|...+.. .....+++|+|||+|.+|+|+|..|++.+.+ |+++.|++... +.
T Consensus 128 ~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~-----v~~~~~~~~~~-~~ 192 (323)
T 3f8d_A 128 LGVP---GEQEFAGRGISYCSVAD------APLFKNRVVAVIGGGDSALEGAEILSSYSTK-----VYLIHRRDTFK-AQ 192 (323)
T ss_dssp CCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHHHHSSE-----EEEECSSSSCC-SC
T ss_pred CCCC---chhhhcCCceEEeccCC------HhHcCCCEEEEECCCHHHHHHHHHHHHhCCe-----EEEEEeCCCCC-cC
Confidence 8888 77777666666554433 2446789999999999999999999998754 99999876421 10
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
T Consensus 193 -------------------------------------------------------------------------------- 192 (323)
T 3f8d_A 193 -------------------------------------------------------------------------------- 192 (323)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCchhh-hhccCeEEEEeCc-eeEEeCC----cEEEcC---Cc--eeeccEEEEecCCCCcccccccCCCcccccccCC
Q 010421 322 MPEGFFS-EAEKGKIVFKRAS-KWWFWKG----GLEFED---NT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHP 390 (511)
Q Consensus 322 ~~~~~~~-~l~~g~v~v~~~~-i~~~~~~----~v~~~d---G~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~ 390 (511)
+.+.+ ..++.+|+++.+. +.+++.+ +|++.| |+ ++++|.||+|||++++.++.+.++.. .++
T Consensus 193 --~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~-----~~~ 265 (323)
T 3f8d_A 193 --PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIE-----TDT 265 (323)
T ss_dssp --HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCC-----BCT
T ss_pred --HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCee-----ecC
Confidence 00111 2234478888775 7777765 377876 87 68999999999999997654433221 123
Q ss_pred CCcccceeeecCCCCCceEEEeeccc----chhhhhHHHHHHHHHHHhc
Q 010421 391 SGLLPLYRGTIHPLIPNMAFVGYIES----VSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 391 ~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~~a~~l~ 435 (511)
.+.+.+... ..++.||||++|.... +.....+..|++.+|..+.
T Consensus 266 ~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 266 NGYIKVDEW-MRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp TSSBCCCTT-CBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCcEecCCC-ceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 344444332 3357899999998765 3346678888888887653
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.97 E-value=2.9e-29 Score=247.26 Aligned_cols=287 Identities=19% Similarity=0.217 Sum_probs=200.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||.|.... ....++.+ .......++.+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 69 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSE----------EVENFPGF-------PEPIAGMELAQ 69 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSCBCHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccc----------ccccCCCC-------CCCCCHHHHHH
Confidence 47999999999999999999 89999999997 7899887510 00011111 11345788999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+.++++++ .+++ ++|++++.... ++..|+|.+.++. ++.||+||+|||. .|..
T Consensus 70 ~l~~~~~~~gv--~~~~-~~v~~i~~~~~-------------~~~~~~v~~~~g~-----~~~~~~vv~AtG~---~~~~ 125 (325)
T 2q7v_A 70 RMHQQAEKFGA--KVEM-DEVQGVQHDAT-------------SHPYPFTVRGYNG-----EYRAKAVILATGA---DPRK 125 (325)
T ss_dssp HHHHHHHHTTC--EEEE-CCEEEEEECTT-------------SSSCCEEEEESSC-----EEEEEEEEECCCE---EECC
T ss_pred HHHHHHHHcCC--EEEe-eeEEEEEeccC-------------CCceEEEEECCCC-----EEEeCEEEECcCC---CcCC
Confidence 99999999988 6666 68999987200 1223788776654 7999999999995 4677
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++... +
T Consensus 126 ~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~-~- 189 (325)
T 2q7v_A 126 LGIP---GEDNFWGKGVSTCATCD------GFFYKGKKVVVIGGGDAAVEEGMFLTKFAD-----EVTVIHRRDTLR-A- 189 (325)
T ss_dssp CCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCS-----EEEEECSSSSCC-S-
T ss_pred CCCC---ChhhccCceEEEeccCC------HHHcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEeCCCcCC-c-
Confidence 7788 76666555566544422 234578999999999999999999988765 499999976421 0
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
.
T Consensus 190 -~------------------------------------------------------------------------------ 190 (325)
T 2q7v_A 190 -N------------------------------------------------------------------------------ 190 (325)
T ss_dssp -C------------------------------------------------------------------------------
T ss_pred -c------------------------------------------------------------------------------
Confidence 0
Q ss_pred cCCchhh-hhccCeEEEEeCc-eeEEeCC----cEEEc---CCc--eeeccEEEEecCCCCcccccccCCCcccccccCC
Q 010421 322 MPEGFFS-EAEKGKIVFKRAS-KWWFWKG----GLEFE---DNT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHP 390 (511)
Q Consensus 322 ~~~~~~~-~l~~g~v~v~~~~-i~~~~~~----~v~~~---dG~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~ 390 (511)
+.+.+ ..++.+|+++.+. +.++.++ +|+++ +|+ ++++|.||+|||++++..+.+.+ +..++
T Consensus 191 --~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~------~~~~~ 262 (325)
T 2q7v_A 191 --KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT------VSLRD 262 (325)
T ss_dssp --HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT------SCBCT
T ss_pred --hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh------cccCC
Confidence 00001 1233467877764 7777654 47776 676 58999999999999997654321 11123
Q ss_pred CCcccceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHhcC
Q 010421 391 SGLLPLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 391 ~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l~g 436 (511)
.+.+.+... +.++.||+|++|..... .....+..|++.+|..+..
T Consensus 263 ~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 309 (325)
T 2q7v_A 263 DGYVDVRDE-IYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTER 309 (325)
T ss_dssp TSCBCCBTT-TBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CccEecCCC-CccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHH
Confidence 344444443 34678999999987653 3466788899988887654
No 16
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.97 E-value=1.5e-29 Score=252.89 Aligned_cols=297 Identities=17% Similarity=0.180 Sum_probs=205.2
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
.+.+||+|||||++|+++|..| .|++|+|||+++.+||.|.. .+|...+ +.++.+ ......++
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~-~~~~~~~------~~~~~~--------~~~~~~~~ 76 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA-LYPEKHI------YDVAGF--------PEVPAIDL 76 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-TCTTSEE------CCSTTC--------SSEEHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc-cCCCccc------ccCCCC--------CCCCHHHH
Confidence 3457999999999999999999 89999999999999999975 4443221 111111 11246788
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
.+++.+.++++++ .++++++|+.++.. .++.|+|.+.++. ++.||+||+|||..+..|
T Consensus 77 ~~~l~~~~~~~~~--~~~~~~~v~~i~~~---------------~~~~~~v~~~~g~-----~~~~~~li~AtG~~~~~~ 134 (360)
T 3ab1_A 77 VESLWAQAERYNP--DVVLNETVTKYTKL---------------DDGTFETRTNTGN-----VYRSRAVLIAAGLGAFEP 134 (360)
T ss_dssp HHHHHHHHHTTCC--EEECSCCEEEEEEC---------------TTSCEEEEETTSC-----EEEEEEEEECCTTCSCCB
T ss_pred HHHHHHHHHHhCC--EEEcCCEEEEEEEC---------------CCceEEEEECCCc-----EEEeeEEEEccCCCcCCC
Confidence 8999999998887 78899999999983 1447888776553 789999999999763367
Q ss_pred CCCCCCCCCC-CCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCcee
Q 010421 160 IIPAFPNNKG-PEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWT 238 (511)
Q Consensus 160 ~~p~~~~~~g-~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~ 238 (511)
..|.++ | .+.+.+..+|.. ++. ...+.+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 135 ~~~~i~---g~~~~~~~~~v~~~-~~~------~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~-----~V~lv~~~~~~~ 199 (360)
T 3ab1_A 135 RKLPQL---GNIDHLTGSSVYYA-VKS------VEDFKGKRVVIVGGGDSALDWTVGLIKNAA-----SVTLVHRGHEFQ 199 (360)
T ss_dssp CCCGGG---CCCTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS-----EEEEECSSSSCS
T ss_pred CCCCCC---CchhhCcCceEEEe-cCC------HHHcCCCcEEEECCCHHHHHHHHHHHhcCC-----EEEEEEcCCCCC
Confidence 777788 6 555655433322 232 133578999999999999999999988764 499999986421
Q ss_pred ecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccc
Q 010421 239 VPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQ 318 (511)
Q Consensus 239 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 318 (511)
+... .
T Consensus 200 -~~~~-------------~------------------------------------------------------------- 204 (360)
T 3ab1_A 200 -GHGK-------------T------------------------------------------------------------- 204 (360)
T ss_dssp -SCSH-------------H-------------------------------------------------------------
T ss_pred -CCHH-------------H-------------------------------------------------------------
Confidence 1000 0
Q ss_pred ccccCCchhhhhccCeEEEEeC-ceeEEeCC-----cEEEc--CC--ceeeccEEEEecCCCCcccccccCCCccccccc
Q 010421 319 MAIMPEGFFSEAEKGKIVFKRA-SKWWFWKG-----GLEFE--DN--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLLE 388 (511)
Q Consensus 319 ~~~~~~~~~~~l~~g~v~v~~~-~i~~~~~~-----~v~~~--dG--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~ 388 (511)
.+.+.+..++.+|+++.+ .+.+++.+ +|++. +| .++++|.||+|||++++..+++.++.+.
T Consensus 205 ----~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~----- 275 (360)
T 3ab1_A 205 ----AHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLEL----- 275 (360)
T ss_dssp ----HHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCE-----
T ss_pred ----HHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhcccc-----
Confidence 001123345567888887 47777643 47775 78 4689999999999999876544322211
Q ss_pred CCCCcccceeeecCCCCCceEEEeeccc----chhhhhHHHHHHHHHHHhcC
Q 010421 389 HPSGLLPLYRGTIHPLIPNMAFVGYIES----VSNLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 389 ~~~~~~~ly~~~~~~~~pnl~~iG~~~~----~~~~~~~e~qa~~~a~~l~g 436 (511)
+ .+.+.+... +.++.||+|++|.... ......+..|++.+|..+.+
T Consensus 276 ~-~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 325 (360)
T 3ab1_A 276 Y-ENALVVDSH-MKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLS 325 (360)
T ss_dssp E-TTEEECCTT-SBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHH
T ss_pred c-cCeeeecCC-CcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHh
Confidence 1 233333332 2357899999997653 23355677888888876643
No 17
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.4e-29 Score=246.41 Aligned_cols=285 Identities=19% Similarity=0.236 Sum_probs=199.0
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
++.+||+|||||++|+++|..| .|++|+|+|+. .+||.|..... ...++.+ .......++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~ 73 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPGF-------RNGITGPEL 73 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTTC-------TTCBCHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCCC-------CCCCCHHHH
Confidence 3458999999999999999999 89999999984 78888765110 0011111 112356789
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEE-EEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEV-AVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
.+|+.++++++++ .+++++ |++++. .+.|+| .+.++. ++.||+||+|||. .
T Consensus 74 ~~~l~~~~~~~~v--~~~~~~-v~~i~~-----------------~~~~~v~~~~~g~-----~~~~d~lviAtG~---~ 125 (335)
T 2a87_A 74 MDEMREQALRFGA--DLRMED-VESVSL-----------------HGPLKSVVTADGQ-----THRARAVILAMGA---A 125 (335)
T ss_dssp HHHHHHHHHHTTC--EEECCC-EEEEEC-----------------SSSSEEEEETTSC-----EEEEEEEEECCCE---E
T ss_pred HHHHHHHHHHcCC--EEEEee-EEEEEe-----------------CCcEEEEEeCCCC-----EEEeCEEEECCCC---C
Confidence 9999999999888 788876 888876 345777 554443 7899999999995 4
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCcee
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWT 238 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~ 238 (511)
|..|.+| |.+.+.+..+|+..+.. .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 126 ~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~-----~V~l~~~~~~~~ 191 (335)
T 2a87_A 126 ARYLQVP---GEQELLGRGVSSCATCD------GFFFRDQDIAVIGGGDSAMEEATFLTRFAR-----SVTLVHRRDEFR 191 (335)
T ss_dssp ECCCCCT---HHHHTBTTTEESCHHHH------GGGGTTCEEEEECSSHHHHHHHHHHTTTCS-----EEEEECSSSSCS
T ss_pred ccCCCCC---chHhccCCceEEeeccc------hhhcCCCEEEEECCCHHHHHHHHHHHHhCC-----eEEEEEcCCcCC
Confidence 6777777 66555555566544322 223578999999999999999999988765 499999876521
Q ss_pred ecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccc
Q 010421 239 VPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQ 318 (511)
Q Consensus 239 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 318 (511)
..
T Consensus 192 ~~------------------------------------------------------------------------------ 193 (335)
T 2a87_A 192 AS------------------------------------------------------------------------------ 193 (335)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred ccccCCchh-hhhccCeEEEEeCc-eeEEeCCc----EEEc---CC--ceeeccEEEEecCCCCcccccccCCCcccccc
Q 010421 319 MAIMPEGFF-SEAEKGKIVFKRAS-KWWFWKGG----LEFE---DN--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLL 387 (511)
Q Consensus 319 ~~~~~~~~~-~~l~~g~v~v~~~~-i~~~~~~~----v~~~---dG--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~ 387 (511)
+.+. +.+++.+|+++.+. +.++++++ |+++ +| +++++|.||+|||++++..+.+ . ++.
T Consensus 194 -----~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~---~---~l~ 262 (335)
T 2a87_A 194 -----KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR---E---AID 262 (335)
T ss_dssp -----TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB---T---TBC
T ss_pred -----HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh---c---ccc
Confidence 0001 12345578887764 77777654 7776 45 4689999999999999976543 1 121
Q ss_pred cCCCCcccceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHhc
Q 010421 388 EHPSGLLPLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 388 ~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l~ 435 (511)
.++++.+.+...+..++.||+|++|..... .....+..|++.+|..+.
T Consensus 263 ~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~ 312 (335)
T 2a87_A 263 VDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAE 312 (335)
T ss_dssp BCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHH
Confidence 233455555554556788999999987653 235567778888877664
No 18
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.96 E-value=9.9e-29 Score=241.79 Aligned_cols=287 Identities=17% Similarity=0.161 Sum_probs=198.9
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
+||+|||||++|+++|..| .|+ +|+|+|+ ..+||.|..... ...++.+ .......++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 63 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQITGSSE----------IENYPGV-------KEVVSGLDFMQ 63 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGGGCSC----------BCCSTTC-------CSCBCHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccccccc----------cccCCCC-------cccCCHHHHHH
Confidence 6999999999999999999 899 9999999 478888765100 0011111 22356788999
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+.++++++ .+++ ++|++++.. ++.|+|.+.++. ++.||+||+|||. .|..
T Consensus 64 ~l~~~~~~~~v--~~~~-~~v~~i~~~----------------~~~~~v~~~~g~-----~~~~~~vv~AtG~---~~~~ 116 (311)
T 2q0l_A 64 PWQEQCFRFGL--KHEM-TAVQRVSKK----------------DSHFVILAEDGK-----TFEAKSVIIATGG---SPKR 116 (311)
T ss_dssp HHHHHHHTTSC--EEEC-SCEEEEEEE----------------TTEEEEEETTSC-----EEEEEEEEECCCE---EECC
T ss_pred HHHHHHHHcCC--EEEE-EEEEEEEEc----------------CCEEEEEEcCCC-----EEECCEEEECCCC---CCCC
Confidence 99999998887 6776 789999873 445777765443 7899999999995 4677
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+.|.+..+|+..+.. .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+.
T Consensus 117 ~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~--- 179 (311)
T 2q0l_A 117 TGIK---GESEYWGKGVSTCATCD------GFFYKNKEVAVLGGGDTAVEEAIYLANICK-----KVYLIHRRDGFR--- 179 (311)
T ss_dssp CCCB---THHHHBTTTEESCHHHH------GGGGTTSEEEEECCSHHHHHHHHHHHTTSS-----EEEEECSSSSCC---
T ss_pred CCCC---ChhhccCCcEEEeecCC------hhhcCCCEEEEECCCHHHHHHHHHHHhcCC-----EEEEEeeCCccC---
Confidence 7777 76666555556544332 234578999999999999999999998765 499999876421
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
..
T Consensus 180 ~~------------------------------------------------------------------------------ 181 (311)
T 2q0l_A 180 CA------------------------------------------------------------------------------ 181 (311)
T ss_dssp SC------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 00
Q ss_pred cCCchhhhh-ccCeEEEEeCc-eeEEeCC-----cEEEc---CCc--eeeccEEEEecCCCCcccccccCCCcccccccC
Q 010421 322 MPEGFFSEA-EKGKIVFKRAS-KWWFWKG-----GLEFE---DNT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLLEH 389 (511)
Q Consensus 322 ~~~~~~~~l-~~g~v~v~~~~-i~~~~~~-----~v~~~---dG~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~ 389 (511)
+.+.+.+ ++.+|+++.+. +.++..+ +|+++ +|+ ++++|.||+|||++|+..+.+..+.. .++..+
T Consensus 182 --~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~-~~l~~~ 258 (311)
T 2q0l_A 182 --PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNS-MLCKCD 258 (311)
T ss_dssp --HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSC-BSSCBC
T ss_pred --HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhccccc-ceeEec
Confidence 0001122 23467777664 6676543 46776 676 58999999999999997665422100 011113
Q ss_pred CCCcccceeeecCCCCCceEEEeeccc--chhhhhHHHHHHHHHHHhc
Q 010421 390 PSGLLPLYRGTIHPLIPNMAFVGYIES--VSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 390 ~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~~a~~l~ 435 (511)
+.+.+.+... +.++.||+|++|.... +.....+..|++.+|..+.
T Consensus 259 ~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 305 (311)
T 2q0l_A 259 EYGSIVVDFS-MKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVI 305 (311)
T ss_dssp TTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCEEeCCc-cccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHH
Confidence 3344444443 3357899999998765 3346778899999888664
No 19
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.96 E-value=2.3e-28 Score=239.38 Aligned_cols=290 Identities=17% Similarity=0.187 Sum_probs=203.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEE-EcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVV-FEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v-~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
..+||+|||||++|+++|..| .|++|+| +|+ +.+||.|.. .+. +..+| . ........++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~-~~~------------~~~~~--~--~~~~~~~~~~ 64 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS-SSE------------IENYP--G--VAQVMDGISF 64 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG-CSC------------BCCST--T--CCSCBCHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee-ece------------eccCC--C--CCCCCCHHHH
Confidence 457999999999999999999 8999999 999 788998876 110 00111 0 1234578899
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
..|+.++++++++ .++++ +|+++ +..+ .+.|.+.+.... ++.||+||+|||. .|
T Consensus 65 ~~~~~~~~~~~~v--~~~~~-~v~~i-~~~~--------------~~~~~v~~~~~~-----~~~~d~lvlAtG~---~~ 118 (315)
T 3r9u_A 65 MAPWSEQCMRFGL--KHEMV-GVEQI-LKNS--------------DGSFTIKLEGGK-----TELAKAVIVCTGS---AP 118 (315)
T ss_dssp HHHHHHHHTTTCC--EEECC-CEEEE-EECT--------------TSCEEEEETTSC-----EEEEEEEEECCCE---EE
T ss_pred HHHHHHHHHHcCc--EEEEE-EEEEE-ecCC--------------CCcEEEEEecCC-----EEEeCEEEEeeCC---CC
Confidence 9999999999998 67777 88888 6310 256776444332 7899999999995 57
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
+.|.+| |.+.+.+..+|+..+.. .....+++|+|||+|.+|+|+|..|.+.+. +|+++.|++.+.
T Consensus 119 ~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~g~~~~e~a~~l~~~g~-----~v~~~~~~~~~~- 183 (315)
T 3r9u_A 119 KKAGFK---GEDEFFGKGVSTCATCD------GFFYKNKEVAVLGGGDTALEEALYLANICS-----KIYLIHRRDEFR- 183 (315)
T ss_dssp CCCCCB---TTTTTBTTTEESCHHHH------GGGGTTSEEEEECCBHHHHHHHHHHHTTSS-----EEEEECSSSSCB-
T ss_pred CCCCCC---ChhhcCCCeEEeeeccc------ccccCcCEEEEECCCHHHHHHHHHHHhhCC-----EEEEEEeCCCCC-
Confidence 888888 77777777777665543 234678999999999999999999998765 499999887521
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
... ..
T Consensus 184 -~~~---------------------------------------~~----------------------------------- 188 (315)
T 3r9u_A 184 -AAP---------------------------------------ST----------------------------------- 188 (315)
T ss_dssp -SCH---------------------------------------HH-----------------------------------
T ss_pred -CCH---------------------------------------HH-----------------------------------
Confidence 000 00
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeCCc-----EEEc--CCc--eeeccEEEEecCCCCcccccccCCCcccc-ccc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG-----LEFE--DNT--KLEADVVILCTGYDGKKKLKAFLPEPFQS-LLE 388 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~-----v~~~--dG~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~-~~~ 388 (511)
+.+.+++.+|+++.+. +.+++.++ |++. +|+ ++++|.||+|||++++..+.+... ..+ +..
T Consensus 189 ------~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~--~~g~l~~ 260 (315)
T 3r9u_A 189 ------VEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDD--SKFLCNM 260 (315)
T ss_dssp ------HHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTT--SCBSSCB
T ss_pred ------HHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhccc--ccceeee
Confidence 0012345578887664 77776543 7776 886 689999999999999977654200 010 112
Q ss_pred CCCCcccceeeecCCCCCceEEEeecc--cchhhhhHHHHHHHHHHHhc
Q 010421 389 HPSGLLPLYRGTIHPLIPNMAFVGYIE--SVSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 389 ~~~~~~~ly~~~~~~~~pnl~~iG~~~--~~~~~~~~e~qa~~~a~~l~ 435 (511)
+.++.+.+.. .+.++.||+|++|... .+.....+..|++.+|..+.
T Consensus 261 ~~~g~i~vd~-~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~ 308 (315)
T 3r9u_A 261 EEGGQVSVDL-KMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAM 308 (315)
T ss_dssp CTTSCBCCCT-TCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEeCC-CcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHH
Confidence 3334444444 2335789999999875 33456678888888887654
No 20
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.96 E-value=2.1e-28 Score=239.28 Aligned_cols=284 Identities=14% Similarity=0.114 Sum_probs=196.7
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDY 82 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (511)
+||+|||||++|+++|..| .|++|+|+|+ .+||.|.. .+ + +..++ ...+....++.+|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~-~~-~-----------~~~~~-----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILD-TV-D-----------IENYI-----SVPKTEGQKLAGA 61 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGG-CC-E-----------ECCBT-----TBSSEEHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecc-cc-c-----------ccccc-----CcCCCCHHHHHHH
Confidence 6999999999999999999 8899999986 47888875 11 0 00000 1223457789999
Q ss_pred HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCCC
Q 010421 83 LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPIIP 162 (511)
Q Consensus 83 l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~p 162 (511)
+.++++++++ .++++++|+.+++..+ ..+.|.|.+.++. ++.||+||+|||. .|..|
T Consensus 62 ~~~~~~~~~v--~~~~~~~v~~i~~~~~-------------~~~~~~v~~~~g~-----~~~~~~lv~AtG~---~~~~~ 118 (310)
T 1fl2_A 62 LKVHVDEYDV--DVIDSQSASKLIPAAV-------------EGGLHQIETASGA-----VLKARSIIVATGA---KWRNM 118 (310)
T ss_dssp HHHHHHTSCE--EEECSCCEEEEECCSS-------------TTCCEEEEETTSC-----EEEEEEEEECCCE---EECCC
T ss_pred HHHHHHHcCC--eEEccCEEEEEEeccc-------------CCceEEEEECCCC-----EEEeCEEEECcCC---CcCCC
Confidence 9999998888 7888999999986311 1346888876553 7899999999995 46667
Q ss_pred CCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecCc
Q 010421 163 AFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPHY 242 (511)
Q Consensus 163 ~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~ 242 (511)
.+| |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+. .
T Consensus 119 ~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~---~ 181 (310)
T 1fl2_A 119 NVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVE-----HVTLLEFAPEMK---A 181 (310)
T ss_dssp CCT---TTTTTBTTTEESCHHHH------GGGGBTCEEEEECCSHHHHHHHHHHHTTBS-----EEEEECSSSSCC---S
T ss_pred CCC---ChhhcccceeEEeccCc------HhhcCCCEEEEECCCHHHHHHHHHHHHhCC-----EEEEEEeCcccC---c
Confidence 777 66666555455443321 234578999999999999999999998765 499999987531 0
Q ss_pred ccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccccc
Q 010421 243 RIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIM 322 (511)
Q Consensus 243 ~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~ 322 (511)
. .
T Consensus 182 ~-------~----------------------------------------------------------------------- 183 (310)
T 1fl2_A 182 D-------Q----------------------------------------------------------------------- 183 (310)
T ss_dssp C-------H-----------------------------------------------------------------------
T ss_pred c-------H-----------------------------------------------------------------------
Confidence 0 0
Q ss_pred CCchhhhhcc-CeEEEEeCc-eeEEeCC-----cEEEcC---Cc--eeeccEEEEecCCCCcccccccCCCcccccccCC
Q 010421 323 PEGFFSEAEK-GKIVFKRAS-KWWFWKG-----GLEFED---NT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHP 390 (511)
Q Consensus 323 ~~~~~~~l~~-g~v~v~~~~-i~~~~~~-----~v~~~d---G~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~ 390 (511)
.+.+.+++ .+|+++.+. +.++.++ +|++.+ |+ ++++|.||+|||++++..++.. . +..++
T Consensus 184 --~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~---~---l~~~~ 255 (310)
T 1fl2_A 184 --VLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEG---A---VERNR 255 (310)
T ss_dssp --HHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTT---T---SCBCT
T ss_pred --HHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhc---c---ccccC
Confidence 00112233 467777764 6777654 467764 54 5899999999999998765321 1 11133
Q ss_pred CCcccceeeecCCCCCceEEEeecccch--hhhhHHHHHHHHHHHhc
Q 010421 391 SGLLPLYRGTIHPLIPNMAFVGYIESVS--NLHTAELRSIWLSRLID 435 (511)
Q Consensus 391 ~~~~~ly~~~~~~~~pnl~~iG~~~~~~--~~~~~e~qa~~~a~~l~ 435 (511)
.+.+.+...+ .++.||+|++|...... ....+..|++.+|..+.
T Consensus 256 ~g~i~vd~~~-~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 301 (310)
T 1fl2_A 256 MGEIIIDAKC-ETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAF 301 (310)
T ss_dssp TSCBCCCTTC-BCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCcEEcCCCC-ccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHH
Confidence 3444444443 36789999999876532 45667788888877654
No 21
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=3.4e-28 Score=238.96 Aligned_cols=285 Identities=15% Similarity=0.179 Sum_probs=191.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
|++.+||+|||||++|+++|..| .|++|+|+|+ ..+||.|.... ....++.+ ......+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~----------~~~~~~~~--------~~~~~~~ 73 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAP----------LVENYLGF--------KSIVGSE 73 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCS----------CBCCBTTB--------SSBCHHH
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccc----------hhhhcCCC--------cccCHHH
Confidence 44568999999999999999999 8999999999 57888876410 00011110 1235678
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+.+++.+.++++++ .+++ ++|.+++.. .+.|+|.+ ++. ++.||+||+|||. .
T Consensus 74 ~~~~~~~~~~~~~v--~~~~-~~v~~i~~~----------------~~~~~v~~-~~~-----~~~~~~li~AtG~---~ 125 (319)
T 3cty_A 74 LAKLFADHAANYAK--IREG-VEVRSIKKT----------------QGGFDIET-NDD-----TYHAKYVIITTGT---T 125 (319)
T ss_dssp HHHHHHHHHHTTSE--EEET-CCEEEEEEE----------------TTEEEEEE-SSS-----EEEEEEEEECCCE---E
T ss_pred HHHHHHHHHHHcCC--EEEE-eeEEEEEEe----------------CCEEEEEE-CCC-----EEEeCEEEECCCC---C
Confidence 88999999988887 6666 689998873 34577765 332 7899999999995 4
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCcee
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWT 238 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~ 238 (511)
|..|.+| |.+.+.+..+|...... .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++...
T Consensus 126 ~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~-----~V~~i~~~~~~~ 191 (319)
T 3cty_A 126 HKHLGVK---GESEYFGKGTSYCSTCD------GYLFKGKRVVTIGGGNSGAIAAISMSEYVK-----NVTIIEYMPKYM 191 (319)
T ss_dssp ECCCCCB---TTTTTBTTTEESCHHHH------GGGGBTSEEEEECCSHHHHHHHHHHTTTBS-----EEEEECSSSSCC
T ss_pred cccCCCC---ChHHhCCceEEEEEecc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCC-----cEEEEEcCCccC
Confidence 6777777 65555444444433221 133568999999999999999999998765 499999876421
Q ss_pred ecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccc
Q 010421 239 VPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQ 318 (511)
Q Consensus 239 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 318 (511)
+ . .
T Consensus 192 -~--~-------~------------------------------------------------------------------- 194 (319)
T 3cty_A 192 -C--E-------N------------------------------------------------------------------- 194 (319)
T ss_dssp -S--C-------H-------------------------------------------------------------------
T ss_pred -C--C-------H-------------------------------------------------------------------
Confidence 0 0 0
Q ss_pred ccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEc---CCc--eeeccEEEEecCCCCcccccccCCCcccccc
Q 010421 319 MAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFE---DNT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLL 387 (511)
Q Consensus 319 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~---dG~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~ 387 (511)
.+.+.+.+.+|+++.+. +.++..+ +|++. +|+ ++++|.||+|||++++..+.+.++ +.
T Consensus 195 ------~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g-----l~ 263 (319)
T 3cty_A 195 ------AYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSG-----VK 263 (319)
T ss_dssp ------HHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSC-----CC
T ss_pred ------HHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcc-----cc
Confidence 00011223345555543 5555433 36665 676 589999999999999976644221 11
Q ss_pred cCCCCcccceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHhc
Q 010421 388 EHPSGLLPLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 388 ~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l~ 435 (511)
.++.+.+.+... +.++.||+|++|..... .....|..|++.+|..+.
T Consensus 264 ~~~~g~i~vd~~-~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 312 (319)
T 3cty_A 264 LDERGYIVVDSR-QRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLY 312 (319)
T ss_dssp BCTTSCBCCCTT-CBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCccEeCCCC-CccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHH
Confidence 133344444444 34678999999987653 345678888888887664
No 22
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=2.7e-28 Score=239.68 Aligned_cols=288 Identities=16% Similarity=0.241 Sum_probs=196.6
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
++.+||+|||||++|+++|..| .|++|+|+|+ ..+||.|..... ...++.+ .......++
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~ 64 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTE----------VENWPGD-------PNDLTGPLL 64 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSB----------CCCSTTC-------CSSCBHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchh----------hhhCCCC-------CCCCCHHHH
Confidence 3468999999999999999999 7899999997 478887754110 0011111 122356788
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
.+++...++++++ .+++++ |+.++.. .+.|+| +.++. ++.||+||+|||. .|
T Consensus 65 ~~~~~~~~~~~~~--~~~~~~-v~~i~~~----------------~~~~~v-~~~~~-----~~~~~~lv~AtG~---~~ 116 (320)
T 1trb_A 65 MERMHEHATKFET--EIIFDH-INKVDLQ----------------NRPFRL-NGDNG-----EYTCDALIIATGA---SA 116 (320)
T ss_dssp HHHHHHHHHHTTC--EEECCC-EEEEECS----------------SSSEEE-EESSC-----EEEEEEEEECCCE---EE
T ss_pred HHHHHHHHHHCCC--EEEEee-eeEEEec----------------CCEEEE-EeCCC-----EEEcCEEEECCCC---Cc
Confidence 9999999999988 777775 8888762 456777 54443 7899999999995 46
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
..|.+| |.+.+.+..+|+..+.. .....+++|+|||+|.+|+|+|..|++.+. +|+++.|++.+..
T Consensus 117 ~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~-----~Vtlv~~~~~~~~ 182 (320)
T 1trb_A 117 RYLGLP---SEEAFKGRGVSACATSD------GFFYRNQKVAVIGGGNTAVEEALYLSNIAS-----EVHLIHRRDGFRA 182 (320)
T ss_dssp CCCCCH---HHHHTBTTTEESCHHHH------GGGGTTSEEEEECSSHHHHHHHHHHTTTSS-----EEEEECSSSSCCC
T ss_pred CCCCCC---ChHHhCCceeEecccCC------ccccCCCeEEEECCCHHHHHHHHHHHhcCC-----eEEEEEeCCcccc
Confidence 777777 65555544555543322 223578999999999999999999988765 4999999765210
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
. ..+
T Consensus 183 -~---------~~~------------------------------------------------------------------ 186 (320)
T 1trb_A 183 -E---------KIL------------------------------------------------------------------ 186 (320)
T ss_dssp -C---------HHH------------------------------------------------------------------
T ss_pred -C---------HHH------------------------------------------------------------------
Confidence 0 000
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeCCc-----EEEcC----C--ceeeccEEEEecCCCCcccccccCCCcccccc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG-----LEFED----N--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLL 387 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~-----v~~~d----G--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~ 387 (511)
.+.+.+.+++.+|+++.+. +.+++.++ |++++ | +++++|.||+|||++++..+.+ .. +.
T Consensus 187 ---~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~---~~---l~ 257 (320)
T 1trb_A 187 ---IKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE---GQ---LE 257 (320)
T ss_dssp ---HHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT---TT---SC
T ss_pred ---HHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc---cc---cc
Confidence 0011123455678888774 77776544 77765 5 4689999999999999876543 11 11
Q ss_pred cCCCCcccceeee----cCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHhc
Q 010421 388 EHPSGLLPLYRGT----IHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 388 ~~~~~~~~ly~~~----~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l~ 435 (511)
.+ ++.+.+...+ ..++.||+|++|..... .....+..|++.+|..+.
T Consensus 258 ~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~ 310 (320)
T 1trb_A 258 LE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAE 310 (320)
T ss_dssp EE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHH
T ss_pred cc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHH
Confidence 12 3334444432 35778999999987653 234567777777777553
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.96 E-value=4.7e-28 Score=239.32 Aligned_cols=285 Identities=16% Similarity=0.209 Sum_probs=193.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcC----CCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEA----SDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYT 77 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~----~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (511)
.+||+|||||++|+++|..| .|++|+|+|+ ...+||.|..... ...++.+ +......
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~----------~~~~~~~-------~~~~~~~ 70 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD----------VENFPGF-------PEGILGV 70 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE----------ECCSTTC-------TTCEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc----------cccCCCC-------ccCCCHH
Confidence 37999999999999999999 8999999999 5667777654110 0011111 1123467
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
++.+++...++++++ .+++++ |+.++.. .+.|+|++ ++. ++.||+||+|||..
T Consensus 71 ~~~~~l~~~~~~~gv--~~~~~~-v~~i~~~----------------~~~~~v~~-~~~-----~~~~~~vv~A~G~~-- 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGT--TIFTET-VTKVDFS----------------SKPFKLFT-DSK-----AILADAVILAIGAV-- 123 (333)
T ss_dssp HHHHHHHHHHHHTTC--EEECCC-CCEEECS----------------SSSEEEEC-SSE-----EEEEEEEEECCCEE--
T ss_pred HHHHHHHHHHHHCCC--EEEEeE-EEEEEEc----------------CCEEEEEE-CCc-----EEEcCEEEECCCCC--
Confidence 889999999998888 777775 8888862 45677776 332 78999999999964
Q ss_pred CCCCCCCCCCCCCCc----ccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEe
Q 010421 158 VPIIPAFPNNKGPEV----FEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVR 233 (511)
Q Consensus 158 ~p~~p~~~~~~g~~~----~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R 233 (511)
|..|.+| |.+. |.+..+|+..+.... .....+++|+|||+|.+|+|+|..|++.+. +|+++.|
T Consensus 124 -~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~-----~V~lv~~ 190 (333)
T 1vdc_A 124 -AKRLSFV---GSGEVLGGFWNRGISACAVCDGA----APIFRNKPLAVIGGGDSAMEEANFLTKYGS-----KVYIIHR 190 (333)
T ss_dssp -ECCCCCB---TCSSSSSCCBTTTEESCHHHHTT----SGGGTTSEEEEECCSHHHHHHHHHHTTTSS-----EEEEECS
T ss_pred -cCCCCCC---CccccccccccCcEEEeccCccc----hhhcCCCeEEEECCChHHHHHHHHHHhcCC-----eEEEEec
Confidence 6677777 5443 544555554332210 011578999999999999999999987765 4999999
Q ss_pred cCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccc
Q 010421 234 TTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEED 313 (511)
Q Consensus 234 ~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 313 (511)
++... +.
T Consensus 191 ~~~~~-~~------------------------------------------------------------------------ 197 (333)
T 1vdc_A 191 RDAFR-AS------------------------------------------------------------------------ 197 (333)
T ss_dssp SSSCC-SC------------------------------------------------------------------------
T ss_pred CCcCC-cc------------------------------------------------------------------------
Confidence 87421 00
Q ss_pred cccccccccCCchh-hhhccCeEEEEeCc-eeEEeCCc-------EEEc---CC--ceeeccEEEEecCCCCcccccccC
Q 010421 314 YASCQMAIMPEGFF-SEAEKGKIVFKRAS-KWWFWKGG-------LEFE---DN--TKLEADVVILCTGYDGKKKLKAFL 379 (511)
Q Consensus 314 ~~~~~~~~~~~~~~-~~l~~g~v~v~~~~-i~~~~~~~-------v~~~---dG--~~~~~D~VI~aTG~~~~~~~~~~~ 379 (511)
+.+. +.+++.+|+++.+. +.+++.++ |+++ +| +++++|.||+|||++++..+.+
T Consensus 198 ----------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-- 265 (333)
T 1vdc_A 198 ----------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-- 265 (333)
T ss_dssp ----------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT--
T ss_pred ----------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh--
Confidence 0000 12345567877764 77776443 7776 46 4589999999999999976543
Q ss_pred CCcccccccCCCCcccceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHh
Q 010421 380 PEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLI 434 (511)
Q Consensus 380 ~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l 434 (511)
. .+..++++.+.+...+..++.||+|++|..... .....+..|++.+|..+
T Consensus 266 -~---~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 266 -G---GVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp -T---SSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred -c---cccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 1 111233445555554455788999999987653 33556777777777654
No 24
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.95 E-value=2.7e-26 Score=239.80 Aligned_cols=285 Identities=14% Similarity=0.127 Sum_probs=198.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
..+||+|||||++|+++|..| .|++|+|+|+ .+||.|.. ... . ..+. ...+....++.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~-~~~-~--------~~~~--------~~~~~~~~~l~ 270 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLD-TVD-I--------ENYI--------SVPKTEGQKLA 270 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTT-CSC-B--------CCBT--------TBSSBCHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccc-ccc-c--------cccC--------CCCCCCHHHHH
Confidence 357999999999999999999 8999999987 47898875 110 0 0011 11234678899
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
+++...++++++ .++++++|+.+++..+ ..+.|+|++.++. ++.||+||+|||. .|.
T Consensus 271 ~~l~~~~~~~gv--~v~~~~~v~~i~~~~~-------------~~~~~~V~~~~g~-----~~~~d~vVlAtG~---~~~ 327 (521)
T 1hyu_A 271 GALKAHVSDYDV--DVIDSQSASKLVPAAT-------------EGGLHQIETASGA-----VLKARSIIIATGA---KWR 327 (521)
T ss_dssp HHHHHHHHTSCE--EEECSCCEEEEECCSS-------------TTSCEEEEETTSC-----EEEEEEEEECCCE---EEC
T ss_pred HHHHHHHHHcCC--EEEcCCEEEEEEeccC-------------CCceEEEEECCCC-----EEEcCEEEECCCC---CcC
Confidence 999999999988 7889999999986311 1346888876654 7899999999995 466
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+.|.+..+|...+.. ...+.+++|+|||+|.+|+|+|..|+..+.+ ||++.|.+.+. +
T Consensus 328 ~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~-----Vtlv~~~~~l~-~ 392 (521)
T 1hyu_A 328 NMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEH-----VTLLEFAPEMK-A 392 (521)
T ss_dssp CCCCT---TTTTTTTTTEECCTTCC------GGGGBTSEEEEECCSHHHHHHHHHHHHHBSE-----EEEECSSSSCC-S
T ss_pred CCCCC---ChhhhcCceEEEeecCc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCCE-----EEEEEeCcccC-c
Confidence 77777 76666555455444332 2346789999999999999999999998754 99999887531 0
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
. .
T Consensus 393 --~-------~--------------------------------------------------------------------- 394 (521)
T 1hyu_A 393 --D-------Q--------------------------------------------------------------------- 394 (521)
T ss_dssp --C-------H---------------------------------------------------------------------
T ss_pred --C-------H---------------------------------------------------------------------
Confidence 0 0
Q ss_pred ccCCchhhhhcc-CeEEEEeCc-eeEEeCC-----cEEEcC---Cc--eeeccEEEEecCCCCcccccccCCCccccccc
Q 010421 321 IMPEGFFSEAEK-GKIVFKRAS-KWWFWKG-----GLEFED---NT--KLEADVVILCTGYDGKKKLKAFLPEPFQSLLE 388 (511)
Q Consensus 321 ~~~~~~~~~l~~-g~v~v~~~~-i~~~~~~-----~v~~~d---G~--~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~ 388 (511)
.+.+.+++ .+|+++.+. +.++.++ +|++.| |+ ++++|.||+|||++++..++. .. +..
T Consensus 395 ----~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~---~~---l~~ 464 (521)
T 1hyu_A 395 ----VLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLE---GA---LER 464 (521)
T ss_dssp ----HHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGT---TT---SCB
T ss_pred ----HHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHh---hh---hcc
Confidence 00112333 567887774 6777653 366654 54 489999999999999876532 11 111
Q ss_pred CCCCcccceeeecCCCCCceEEEeecccch--hhhhHHHHHHHHHHHh
Q 010421 389 HPSGLLPLYRGTIHPLIPNMAFVGYIESVS--NLHTAELRSIWLSRLI 434 (511)
Q Consensus 389 ~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~--~~~~~e~qa~~~a~~l 434 (511)
++.+.+.+...+ .++.||+|++|...... ....|..|++.+|..+
T Consensus 465 ~~~G~I~Vd~~~-~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i 511 (521)
T 1hyu_A 465 NRMGEIIIDAKC-ETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSA 511 (521)
T ss_dssp CTTSCBCCCTTC-BCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcEEeCCCC-CCCCCCEEEeecccCCCcceeeehHHhHHHHHHHH
Confidence 333444443332 35789999999876532 3566777887777654
No 25
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.95 E-value=6.1e-27 Score=242.07 Aligned_cols=207 Identities=23% Similarity=0.315 Sum_probs=142.1
Q ss_pred CeEEEECCCHHHHHHHHhc--cC-----CCcEEEcCCCCcCccccCCCc-CceeccC-----------CCCccccCCCC-
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RH-----HNPVVFEASDSIGGIWKSCSY-NSTKLQS-----------HRSDYEFTDFP- 64 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g-----~~v~v~e~~~~~GG~w~~~~~-~~~~~~~-----------~~~~~~~~~~~- 64 (511)
+||+|||||++|+++|..| .| .+|+|||+++.+| |....+ ++..++. |...+.|..+.
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 5899999999999999999 66 9999999999887 655333 4444332 22222222100
Q ss_pred -------CCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce--EEEEEeC
Q 010421 65 -------WPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW--EVAVQTH 135 (511)
Q Consensus 65 -------~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~ 135 (511)
++.+ ...++.+.++.+|+++++++++. .++++++|+++++..+ +.+.| +|++.++
T Consensus 109 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~~-------------~~~~~~~~V~~~~g 172 (463)
T 3s5w_A 109 KHDRLVDFINL-GTFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPMLS-------------AGQVEALRVISRNA 172 (463)
T ss_dssp HTTCHHHHHHH-CCSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEEE-------------TTEEEEEEEEEEET
T ss_pred hcCceeecccc-cCCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEecC-------------CCceEEEEEEEecC
Confidence 0111 24577899999999999999987 8999999999987311 13345 5555555
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccc--eEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHH
Q 010421 136 NSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEG--QVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLA 213 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g--~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a 213 (511)
. ++..++.||+||+|||. .|.+|.. .+.+.+ .++|+.++.............+++|+|||+|.||+|+|
T Consensus 173 ~-g~~~~~~~d~lVlAtG~---~p~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a 243 (463)
T 3s5w_A 173 D-GEELVRTTRALVVSPGG---TPRIPQV-----FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAF 243 (463)
T ss_dssp T-SCEEEEEESEEEECCCC---EECCCGG-----GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHH
T ss_pred C-CceEEEEeCEEEECCCC---CCCCcch-----hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHH
Confidence 3 44557899999999994 5677652 234445 68998887541100000011689999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEEecCceeecCc
Q 010421 214 KECAESNQGPEGQPCTMIVRTTHWTVPHY 242 (511)
Q Consensus 214 ~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~ 242 (511)
..|++.... .+|+++.|++. ++|..
T Consensus 244 ~~l~~~~~~---~~Vt~v~r~~~-~~p~~ 268 (463)
T 3s5w_A 244 IDLNDSYPS---VQADMILRASA-LKPAD 268 (463)
T ss_dssp HHHHHHCTT---EEEEEECSSSS-CCBCC
T ss_pred HHHHhcCCC---CeEEEEEeCCC-CcCcc
Confidence 999998221 35999999987 44543
No 26
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.95 E-value=4.2e-27 Score=243.65 Aligned_cols=307 Identities=15% Similarity=0.156 Sum_probs=179.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCCh
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
|+ .+||+|||||++|+++|..| . +.+|+|||+++.++ |.....|.. ... .++.. ...++..
T Consensus 1 M~-~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~----------~~g-~~~~~-~~~~~~~ 65 (472)
T 3iwa_A 1 MS-LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYY----------VSG-EVSNI-ESLQATP 65 (472)
T ss_dssp ----CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC------------------------------------------
T ss_pred CC-CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchh----------hcC-CCCch-HHhcccc
Confidence 53 57999999999999999999 4 89999999988763 111001100 000 00000 0111112
Q ss_pred HHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 77 TEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.++..+.+.+.+++++ .++++++|++++.. .. .+.+.+..++....+.||+||+|||.
T Consensus 66 ~~~~~~~~~~~~~~gi--~~~~~~~V~~id~~----------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~-- 123 (472)
T 3iwa_A 66 YNVVRDPEFFRINKDV--EALVETRAHAIDRA----------------AH--TVEIENLRTGERRTLKYDKLVLALGS-- 123 (472)
T ss_dssp ---------------C--EEECSEEEEEEETT----------------TT--EEEEEETTTCCEEEEECSEEEECCCE--
T ss_pred chhccCHHHHhhhcCc--EEEECCEEEEEECC----------------CC--EEEEeecCCCCEEEEECCEEEEeCCC--
Confidence 2356677777777888 78899999999862 22 35555533334447899999999994
Q ss_pred CCCCCCCCCCCCCCCcccceEEeccccCccchhhh-hhccCCCcEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEEec
Q 010421 157 DVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAA-SQLLKDKKVAVVGFKKSAIDLAKECAES-NQGPEGQPCTMIVRT 234 (511)
Q Consensus 157 ~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~-~~~~~~k~V~VvG~G~sg~d~a~~l~~~-~~~~~~~~Vtl~~R~ 234 (511)
.|..|.+| |.+ .. .+++.....+...... .....+++|+|||+|.+|+|+|..+++. +.+ |+++.|.
T Consensus 124 -~p~~p~i~---G~~-~~-~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~-----Vtlv~~~ 192 (472)
T 3iwa_A 124 -KANRPPVE---GMD-LA-GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGID-----TTVVELA 192 (472)
T ss_dssp -EECCCSCT---TTT-SB-TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCE-----EEEECSS
T ss_pred -CcCCCCCC---CCC-CC-CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCc-----EEEEEcc
Confidence 67888888 654 22 2444333322110000 0013478999999999999999999998 764 9999998
Q ss_pred Cceeec-CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccc
Q 010421 235 THWTVP-HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEED 313 (511)
Q Consensus 235 ~~~~~p-~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 313 (511)
+. ++| ... ..
T Consensus 193 ~~-~l~~~~~-----------~~--------------------------------------------------------- 203 (472)
T 3iwa_A 193 DQ-IMPGFTS-----------KS--------------------------------------------------------- 203 (472)
T ss_dssp SS-SSTTTSC-----------HH---------------------------------------------------------
T ss_pred Cc-ccccccC-----------HH---------------------------------------------------------
Confidence 75 233 111 00
Q ss_pred cccccccccCCchhhhhccCeEEEEeCc-eeEEeC-Cc---EEEcCCceeeccEEEEecCCCCcccccccCCCccccccc
Q 010421 314 YASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK-GG---LEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLE 388 (511)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~-~~---v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~ 388 (511)
+.+.+.+.+++.+|+++.+. |.+++. ++ |+++||+++++|.||+|||++++..+.+.++ +..
T Consensus 204 --------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g-----l~~ 270 (472)
T 3iwa_A 204 --------LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAG-----LEL 270 (472)
T ss_dssp --------HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHT-----CCB
T ss_pred --------HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCC-----ccC
Confidence 00111234555677888774 777765 33 6788999999999999999999876532111 111
Q ss_pred CCCCcccceeeecCCCCCceEEEeeccc-----------chhhhhHHHHHHHHHHHhcCCC
Q 010421 389 HPSGLLPLYRGTIHPLIPNMAFVGYIES-----------VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 389 ~~~~~~~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
++++.+.+...+ .++.||+|++|.... ......+..|++.+|..+.|+.
T Consensus 271 ~~~g~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 330 (472)
T 3iwa_A 271 DPRGAIIVDTRM-RTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGD 330 (472)
T ss_dssp CTTCCEECCTTC-BCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEECCCc-ccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcCCC
Confidence 333444444332 357899999997652 1134679999999999998753
No 27
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.95 E-value=5.6e-27 Score=239.68 Aligned_cols=296 Identities=16% Similarity=0.172 Sum_probs=191.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cC--CCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RH--HNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
.+|+|||||++|++||..| .+ .+|+|+|+++..++ ..+. .|.. ..... .+.........
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~~--l~~~---~~~~~-~~~~~~~~~~~---- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF-------ANCA--LPYV---IGEVV-EDRRYALAYTP---- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB-------CGGG--HHHH---HTTSS-CCGGGTBCCCH----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC-------Ccch--hHHH---HcCCc-cchhhhhhcCH----
Confidence 3799999999999999999 44 67999999876532 1111 1100 00000 00000011111
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
+.+.+++++ .++.+++|+.++.. .. .+.+....++...++.||+||||||+ .|+
T Consensus 64 ---~~~~~~~~i--~~~~~~~V~~id~~----------------~~--~~~~~~~~~~~~~~~~yd~lVIATGs---~p~ 117 (437)
T 4eqs_A 64 ---EKFYDRKQI--TVKTYHEVIAINDE----------------RQ--TVSVLNRKTNEQFEESYDKLILSPGA---SAN 117 (437)
T ss_dssp ---HHHHHHHCC--EEEETEEEEEEETT----------------TT--EEEEEETTTTEEEEEECSEEEECCCE---EEC
T ss_pred ---HHHHHhcCC--EEEeCCeEEEEEcc----------------Cc--EEEEEeccCCceEEEEcCEEEECCCC---ccc
Confidence 233456777 78889999999863 11 35666655555567899999999994 578
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|+++ |...+..+-+ .+...+.. ......+++|+|||+|.+|+|+|..+++.+.+ ||++.|++. ++|
T Consensus 118 ~p~i~---g~~~~~~~~~--~~~~~l~~--~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~-----Vtlv~~~~~-ll~ 184 (437)
T 4eqs_A 118 SLGFE---SDITFTLRNL--EDTDAIDQ--FIKANQVDKVLVVGAGYVSLEVLENLYERGLH-----PTLIHRSDK-INK 184 (437)
T ss_dssp CCCCC---CTTEECCSSH--HHHHHHHH--HHHHHTCCEEEEECCSHHHHHHHHHHHHHTCE-----EEEEESSSC-CST
T ss_pred ccccc---CceEEeeccH--HHHHHHHH--hhhccCCcEEEEECCccchhhhHHHHHhcCCc-----ceeeeeecc-ccc
Confidence 88887 6443322111 11111110 01123578999999999999999999999865 999999875 333
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
..+ .
T Consensus 185 ~~d-------~--------------------------------------------------------------------- 188 (437)
T 4eqs_A 185 LMD-------A--------------------------------------------------------------------- 188 (437)
T ss_dssp TSC-------G---------------------------------------------------------------------
T ss_pred ccc-------c---------------------------------------------------------------------
Confidence 322 0
Q ss_pred ccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceee
Q 010421 321 IMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRG 399 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 399 (511)
.+.+.+.+.+++.+|+++.+. +.+++++.|++++|+++++|.||+|+|.+|+..+.+.. ++..++++.+.+..+
T Consensus 189 ~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~-----gl~~~~~G~I~vd~~ 263 (437)
T 4eqs_A 189 DMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESS-----NIKLDRKGFIPVNDK 263 (437)
T ss_dssp GGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCGGGTTS-----SCCCCTTSCEECCTT
T ss_pred hhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHHhh-----hhhhccCCcEecCCC
Confidence 001111234455567777765 88899999999999999999999999999987654322 122234444545444
Q ss_pred ecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCCC
Q 010421 400 TIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 400 ~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+ .++.||+|++|.+... ...+.+..|++.+|..+.|..
T Consensus 264 ~-~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~~ 312 (437)
T 4eqs_A 264 F-ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGND 312 (437)
T ss_dssp C-BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSCT
T ss_pred c-cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCCC
Confidence 3 3678999999976431 234678999999999998753
No 28
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.94 E-value=4.3e-27 Score=250.18 Aligned_cols=299 Identities=14% Similarity=0.206 Sum_probs=199.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
+.++|+|||||++|+++|..| . +.+|+|||+++.++ |..+.+ |. ... .........
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~l--p~---~~~--------g~~~~~~~~ 94 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGL--PY---YIG--------GVITERQKL 94 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HH---HHT--------TSSCCGGGG
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCC--ch---hhc--------CcCCChHHh
Confidence 357999999999999999999 4 89999999988764 211111 00 000 011122333
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+..+++.+++++++ .++++++|++++.. .. .+.+.+..++....+.||+||+|||. .
T Consensus 95 ~~~~~~~~~~~~gi--~v~~~~~V~~id~~----------------~~--~v~v~~~~~g~~~~~~~d~lviAtG~---~ 151 (588)
T 3ics_A 95 LVQTVERMSKRFNL--DIRVLSEVVKINKE----------------EK--TITIKNVTTNETYNEAYDVLILSPGA---K 151 (588)
T ss_dssp BSSCHHHHHHHTTC--EEECSEEEEEEETT----------------TT--EEEEEETTTCCEEEEECSEEEECCCE---E
T ss_pred hccCHHHHHHhcCc--EEEECCEEEEEECC----------------CC--EEEEeecCCCCEEEEeCCEEEECCCC---C
Confidence 55677888888998 78999999999873 22 35555433344457899999999994 6
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCccchhh-hhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCce
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEA-ASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~ 237 (511)
|..|.+| |.+...+ ++++.......... ......+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+.
T Consensus 152 p~~p~i~---G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~-----Vtlv~~~~~- 221 (588)
T 3ics_A 152 PIVPSIP---GIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIE-----VTLVEMANQ- 221 (588)
T ss_dssp ECCCCCT---TTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSSS-
T ss_pred CCCCCCC---CcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCe-----EEEEecCCc-
Confidence 7888888 6533322 45544333211000 00124689999999999999999999998764 999999774
Q ss_pred eecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccc
Q 010421 238 TVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASC 317 (511)
Q Consensus 238 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 317 (511)
++|... ...
T Consensus 222 ~l~~~~-----------~~~------------------------------------------------------------ 230 (588)
T 3ics_A 222 VMPPID-----------YEM------------------------------------------------------------ 230 (588)
T ss_dssp SCTTSC-----------HHH------------------------------------------------------------
T ss_pred ccccCC-----------HHH------------------------------------------------------------
Confidence 333221 000
Q ss_pred cccccCCchhhhhccCeEEEEeCc-eeEEeC--CcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 318 QMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 318 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
.+.+.+.+++.+|+++.+. |.+++. ++|+++||+++++|.||+|||++++..+++..+.. .++++.+
T Consensus 231 -----~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~-----~~~~g~i 300 (588)
T 3ics_A 231 -----AAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLA-----LGVRGTI 300 (588)
T ss_dssp -----HHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCC-----BCGGGCB
T ss_pred -----HHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCce-----EcCCCCE
Confidence 0011133455667887764 778876 56999999999999999999999987654322211 1233344
Q ss_pred cceeeecCCCCCceEEEeeccc-----------chhhhhHHHHHHHHHHHhcC
Q 010421 395 PLYRGTIHPLIPNMAFVGYIES-----------VSNLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~~a~~l~g 436 (511)
.+... +.++.||+|++|.... ......+..|++.+|..+.|
T Consensus 301 ~vd~~-~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 301 KVNEK-FQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp CCCTT-SBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EECCc-cccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 44433 2357899999997652 12346799999999999988
No 29
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.94 E-value=6.2e-27 Score=241.84 Aligned_cols=301 Identities=15% Similarity=0.085 Sum_probs=183.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPNRDDPGF 73 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 73 (511)
|++.+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+..+.. ...++.. ...
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~-------~~~ 73 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV-------KIP 73 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS-------CCC
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC-------CCC
Confidence 66678999999999999999999 899999999999999998751 112111100000 0001110 111
Q ss_pred CChHHHHHHH------------HHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 74 PSYTEILDYL------------ESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 74 ~~~~~~~~yl------------~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
.....+..+. ....++.++ .+..+ ++..++. ..+.|...++ +..
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~v~~id~------------------~~~~V~~~~g---~~~ 129 (466)
T 3l8k_A 74 LDFSTVQDRKDYVQELRFKQHKRNMSQYETL--TFYKG-YVKIKDP------------------THVIVKTDEG---KEI 129 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCTTE--EEESE-EEEEEET------------------TEEEEEETTS---CEE
T ss_pred cCHHHHHHHHHhheeccccchHHHHHHhCCC--EEEEe-EEEEecC------------------CeEEEEcCCC---cEE
Confidence 2233333222 222233333 33333 5665553 3445554433 322
Q ss_pred EEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC
Q 010421 142 RYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ 221 (511)
Q Consensus 142 ~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 221 (511)
++.||+||+|||. .|..|.+| |.+ .++++.++..... .....+++|+|||+|.+|+|+|..|++.+.
T Consensus 130 ~~~~d~lviAtG~---~p~~p~i~---G~~----~~~t~~~~~~~~~---~l~~~~~~vvViGgG~~g~e~A~~l~~~g~ 196 (466)
T 3l8k_A 130 EAETRYMIIASGA---ETAKLRLP---GVE----YCLTSDDIFGYKT---SFRKLPQDMVIIGAGYIGLEIASIFRLMGV 196 (466)
T ss_dssp EEEEEEEEECCCE---EECCCCCT---TGG----GSBCHHHHHSTTC---SCCSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEecCEEEECCCC---CccCCCCC---Ccc----ceEeHHHHHHHHH---HHhhCCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 3899999999994 67888888 655 2455544431100 012357899999999999999999999875
Q ss_pred CCCCCcEEEEEecCceeecCc-ccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcc
Q 010421 222 GPEGQPCTMIVRTTHWTVPHY-RIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLL 300 (511)
Q Consensus 222 ~~~~~~Vtl~~R~~~~~~p~~-~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (511)
+ |+++.|.+.. +|.. + . . +...+.
T Consensus 197 ~-----Vtlv~~~~~~-l~~~~d-------~----~----------------------------~~~~l~---------- 221 (466)
T 3l8k_A 197 Q-----THIIEMLDRA-LITLED-------Q----D----------------------------IVNTLL---------- 221 (466)
T ss_dssp E-----EEEECSSSSS-CTTSCC-------H----H----------------------------HHHHHH----------
T ss_pred E-----EEEEEeCCcC-CCCCCC-------H----H----------------------------HHHHHH----------
Confidence 4 9999998752 3322 1 0 0 000000
Q ss_pred cCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC---Cc--EEEc--CCc--eeeccEEEEecCCC
Q 010421 301 KYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK---GG--LEFE--DNT--KLEADVVILCTGYD 370 (511)
Q Consensus 301 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~---~~--v~~~--dG~--~~~~D~VI~aTG~~ 370 (511)
+.++ |+++.+. +.+++. ++ |.++ ||+ ++++|.||+|||++
T Consensus 222 ---------------------------~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 222 ---------------------------SILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp ---------------------------HHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred ---------------------------hcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 1111 4455443 555554 33 5666 676 69999999999999
Q ss_pred Ccccc-cccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 371 GKKKL-KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 371 ~~~~~-~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
++..+ ++. .++..++++ +.+...+ .++.||+|++|.... +.....+..|++.+|..+.|.
T Consensus 272 p~~~l~l~~-----~gl~~~~~G-i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 272 PVIPEGARE-----IGLSISKTG-IVVDETM-KTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp ECCCTTTGG-----GTCCBCSSS-BCCCTTC-BCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred cccccchhh-----cCceeCCCC-EeECCCc-cCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 98762 111 112223344 5554433 357899999998766 345678999999999988764
No 30
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.94 E-value=8.4e-27 Score=237.43 Aligned_cols=292 Identities=14% Similarity=0.105 Sum_probs=186.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCC--cEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHN--PVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
+.+||+|||||++|+++|..| .|.+ |+|+|+++.++ |....+ ++... .......+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~~------------~~~~~~~~ 66 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIP-------YERPPL--SKEYL------------AREKTFER 66 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCC-------BCSGGG--GTTTT------------TTSSCSGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCC-------cCcccC--CHHHH------------cCCCCHHH
Confidence 357999999999999999999 6766 99999987652 211100 00000 00001112
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+..+...+.++.++ .++++++|+.++.. .+.|.+.++. .+.||+||+|||. .
T Consensus 67 ~~~~~~~~~~~~~i--~~~~~~~v~~id~~------------------~~~v~~~~g~-----~~~~d~lvlAtG~---~ 118 (415)
T 3lxd_A 67 ICIRPAQFWEDKAV--EMKLGAEVVSLDPA------------------AHTVKLGDGS-----AIEYGKLIWATGG---D 118 (415)
T ss_dssp GBSSCHHHHHHTTE--EEEETCCEEEEETT------------------TTEEEETTSC-----EEEEEEEEECCCE---E
T ss_pred hccCCHHHHHHCCc--EEEeCCEEEEEECC------------------CCEEEECCCC-----EEEeeEEEEccCC---c
Confidence 22222344456677 78888899999862 2357766554 7899999999994 6
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCccchhhhhhccC-CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCce
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLK-DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~-~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~ 237 (511)
|..|.+| |.+.. .+++.....+... ....... +++|+|||+|.+|+|+|..+.+.+.+ |+++.+.+.+
T Consensus 119 ~~~~~i~---g~~~~--~v~~~~~~~d~~~-l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~-----Vtvv~~~~~~ 187 (415)
T 3lxd_A 119 PRRLSCV---GADLA--GVHAVRTKEDADR-LMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVN-----VTLLEALPRV 187 (415)
T ss_dssp CCCCBTT---SSCCB--TEECCCSHHHHHH-HHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSST
T ss_pred cCCCCCC---Ccccc--CEEEEcCHHHHHH-HHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCe-----EEEEecCCch
Confidence 7888888 54421 1222222111100 0012234 89999999999999999999998754 9999998753
Q ss_pred eecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccc
Q 010421 238 TVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASC 317 (511)
Q Consensus 238 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 317 (511)
+ ++.. + ..
T Consensus 188 l-~~~~------~----~~------------------------------------------------------------- 195 (415)
T 3lxd_A 188 L-ARVA------G----EA------------------------------------------------------------- 195 (415)
T ss_dssp T-TTTS------C----HH-------------------------------------------------------------
T ss_pred h-hhhc------C----HH-------------------------------------------------------------
Confidence 2 2110 0 00
Q ss_pred cccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCC
Q 010421 318 QMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPS 391 (511)
Q Consensus 318 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~ 391 (511)
+.+.+.+.+++.+|+++.+. +.+++.+ +|+++||+++++|.||+|||++++..+.+..+... +
T Consensus 196 ----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~-----~-- 264 (415)
T 3lxd_A 196 ----LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASG-----G-- 264 (415)
T ss_dssp ----HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCC-----S--
T ss_pred ----HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCc-----C--
Confidence 00111234555678888764 7777653 47889999999999999999999976543222111 1
Q ss_pred CcccceeeecCCCCCceEEEeecccch------------hhhhHHHHHHHHHHHhcCCC
Q 010421 392 GLLPLYRGTIHPLIPNMAFVGYIESVS------------NLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 392 ~~~~ly~~~~~~~~pnl~~iG~~~~~~------------~~~~~e~qa~~~a~~l~g~~ 438 (511)
+++.+..++ .++.||+|++|...... .+..+..||+.+|+.+.|+.
T Consensus 265 ~gi~vd~~~-~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 322 (415)
T 3lxd_A 265 NGVDVDEFC-RTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGAP 322 (415)
T ss_dssp SSEECCTTC-BCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEECCCC-CcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcCCC
Confidence 123333332 35789999999754321 24789999999999998864
No 31
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.94 E-value=4.9e-28 Score=243.15 Aligned_cols=280 Identities=13% Similarity=0.091 Sum_probs=183.7
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
++.+|+|||||+||++||..| .+.+|+|||+++.++ |....+ ++. +.. ....+++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~l--~~~---l~g----------~~~~~~l~ 65 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPRL--NEI---IAK----------NKSIDDIL 65 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGGH--HHH---HHS----------CCCGGGTB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccChh--hHH---HcC----------CCCHHHcc
Confidence 457899999999999999999 789999999987763 211110 000 000 01112222
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+..++.+++++ .++++++|+++++. + .+|++.++. ++.||+||+|||+ .|+
T Consensus 66 ~~~~~~~~~~~i--~~~~~~~V~~id~~----------------~--~~v~~~~g~-----~~~yd~lvlAtG~---~p~ 117 (385)
T 3klj_A 66 IKKNDWYEKNNI--KVITSEFATSIDPN----------------N--KLVTLKSGE-----KIKYEKLIIASGS---IAN 117 (385)
T ss_dssp SSCHHHHHHTTC--EEECSCCEEEEETT----------------T--TEEEETTSC-----EEECSEEEECCCE---EEC
T ss_pred CCCHHHHHHCCC--EEEeCCEEEEEECC----------------C--CEEEECCCC-----EEECCEEEEecCC---CcC
Confidence 333444566788 88999999999872 1 157776654 7999999999994 688
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+ .+++...+.+.... ......+++|+|||+|.+|+|+|..|++.+.+ ||++.|++.+ ++
T Consensus 118 ~p~i~---G~~----~v~~~~~~~d~~~l-~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~-----Vtvv~~~~~~-l~ 183 (385)
T 3klj_A 118 KIKVP---HAD----EIFSLYSYDDALKI-KDECKNKGKAFIIGGGILGIELAQAIIDSGTP-----ASIGIILEYP-LE 183 (385)
T ss_dssp CCCCT---TCS----CEECCSSHHHHHHH-HHHHHHHSCEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSSSS-CT
T ss_pred CCCCC---CCC----CeEEeCCHHHHHHH-HHHhhcCCeEEEECCCHHHHHHHHHHHhCCCe-----EEEEEcCCcc-ch
Confidence 88888 655 34554433321100 01112378999999999999999999998765 9999998753 23
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
+.. + ... .
T Consensus 184 ~~~------~----~~~----------------------------~---------------------------------- 191 (385)
T 3klj_A 184 RQL------D----RDG----------------------------G---------------------------------- 191 (385)
T ss_dssp TTS------C----HHH----------------------------H----------------------------------
T ss_pred hhc------C----HHH----------------------------H----------------------------------
Confidence 211 0 000 0
Q ss_pred ccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceee
Q 010421 321 IMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRG 399 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 399 (511)
+.+.+.+++.+|+++.+. +.++ |+++++|.||+|||++++..+.+..+.. . ++++.+...
T Consensus 192 ---~~~~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~------~-~~gi~vd~~ 252 (385)
T 3klj_A 192 ---LFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIA------S-KRGILVNDH 252 (385)
T ss_dssp ---HHHHHHHHTTTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECCGGGTTSCCC------B-SSSEEECTT
T ss_pred ---HHHHHHHHhCCCEEEeCCEEEEc---------CeEEecCeEEECcCcccChhhhhhcCCC------c-CCCEEECCC
Confidence 011123445567776654 4443 6779999999999999997664322211 1 122434333
Q ss_pred ecCCCCCceEEEeeccc-----chhhhhHHHHHHHHHHHhcCCC
Q 010421 400 TIHPLIPNMAFVGYIES-----VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 400 ~~~~~~pnl~~iG~~~~-----~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+ .++.||+|++|.... ...+..+..||+.+|+.+.|+.
T Consensus 253 ~-~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 253 M-ETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp C-BCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred c-ccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 2 357899999997654 3346789999999999998853
No 32
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.94 E-value=1.7e-26 Score=226.18 Aligned_cols=184 Identities=17% Similarity=0.279 Sum_probs=126.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
|++.+||+||||||||++||.+| .|++|+|||+. ..||.+.... +........++.+ +...++.+
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~-~~gg~~~~G~-----~~~~~~i~~~~g~-------~~~i~~~~ 67 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGF-MAGGVAAGGQ-----LTTTTIIENFPGF-------PNGIDGNE 67 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS-SGGGCCTTCG-----GGGSSEECCSTTC-------TTCEEHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCcccCCC-----cCChHHhhhccCC-------cccCCHHH
Confidence 88889999999999999999999 99999999995 4555432211 1111111112211 22346788
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+.+++...+++++. .+. ..+|..+... ...+.+.+.++. ++.||+||+|||+ .
T Consensus 68 l~~~~~~~~~~~~~--~~~-~~~v~~~~~~----------------~~~~~~~~~~~~-----~~~~~~liiATG~---~ 120 (314)
T 4a5l_A 68 LMMNMRTQSEKYGT--TII-TETIDHVDFS----------------TQPFKLFTEEGK-----EVLTKSVIIATGA---T 120 (314)
T ss_dssp HHHHHHHHHHHTTC--EEE-CCCEEEEECS----------------SSSEEEEETTCC-----EEEEEEEEECCCE---E
T ss_pred HHHHHHHHHhhcCc--EEE-EeEEEEeecC----------------CCceEEEECCCe-----EEEEeEEEEcccc---c
Confidence 88899999988886 443 3455555542 233344444333 7999999999994 6
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
|+.|.+| |.+.+.+..++...+.... ...+.+++|+|||+|.+|+|+|..|++.+.+ ||++.|.+.
T Consensus 121 ~~~~~ip---G~~~~~~~~~~~~~~~~~~----~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~-----Vt~v~~~~~ 186 (314)
T 4a5l_A 121 AKRMHVP---GEDKYWQNGVSACAICDGA----VPIFRNKVLMVVGGGDAAMEEALHLTKYGSK-----VIILHRRDA 186 (314)
T ss_dssp ECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSSE-----EEEECSSSS
T ss_pred ccccCCC---ccccccccceeeehhhhhh----hhhcCCCeEEEECCChHHHHHHHHHHHhCCe-----eeeeccccc
Confidence 7888888 7766555555554443211 2346789999999999999999999988764 999998764
No 33
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.94 E-value=3.7e-26 Score=222.76 Aligned_cols=281 Identities=16% Similarity=0.173 Sum_probs=177.3
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+.+||+||||||||++||.+| .|++|+|||++ ..||.+.. .||+. +. ......+++.
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~-~~~~~--------------~~-----~~~~~~~~~~ 63 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQ-NSHGF--------------IT-----RDGIKPEEFK 63 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSS-CBCCS--------------TT-----CTTBCHHHHH
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeee-ecCCc--------------cC-----CCCCCHHHHH
Confidence 468999999999999999999 89999999995 56776554 33321 11 1123456776
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
+.....+.+++. ...+..++..+... .++.++|.+.++. ++.||+|||||| +.|+
T Consensus 64 ~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------~~~~~~v~~~~g~-----~~~a~~liiATG---s~p~ 118 (304)
T 4fk1_A 64 EIGLNEVMKYPS--VHYYEKTVVMITKQ---------------STGLFEIVTKDHT-----KYLAERVLLATG---MQEE 118 (304)
T ss_dssp HHHHHHHTTSTT--EEEEECCEEEEEEC---------------TTSCEEEEETTCC-----EEEEEEEEECCC---CEEE
T ss_pred HHHHHHHHhcCC--EEEEeeEEEEeeec---------------CCCcEEEEECCCC-----EEEeCEEEEccC---Cccc
Confidence 666666666654 34556677777763 1566778776665 899999999999 4688
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCH-HHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSA-IDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg-~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
.|++| |.+.+.+.-++...... ....++++++|||+|..+ .++|..+.+.+. +|+++.|.+...
T Consensus 119 ~p~i~---G~~~~~~~~v~~~~~~~------~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~-----~v~i~~~~~~~~- 183 (304)
T 4fk1_A 119 FPSIP---NVREYYGKSLFSCPYCD------GWELKDQPLIIISENEDHTLHMTKLVYNWST-----DLVIATNGNELS- 183 (304)
T ss_dssp CCSCT---THHHHBTTTEESCHHHH------SGGGTTSCEEEECCSHHHHHHHHHHHTTTCS-----CEEEECSSCCCC-
T ss_pred ccccc---Cccccccceeeeccccc------hhHhcCCceeeecCCCchhhhHHHHHHhCCc-----eEEEEeccccch-
Confidence 89898 76666554444333222 234678899999998764 566666655554 488877654210
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
..
T Consensus 184 ---------------~~--------------------------------------------------------------- 185 (304)
T 4fk1_A 184 ---------------QT--------------------------------------------------------------- 185 (304)
T ss_dssp ---------------HH---------------------------------------------------------------
T ss_pred ---------------hh---------------------------------------------------------------
Confidence 00
Q ss_pred cccCCchhhhhccCeEEEEeCceeEEeCC-----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRASKWWFWKG-----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~i~~~~~~-----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
+.+.+.+.++.++...+..+..+ +|.++||+++++|.+|+++|..++..++..++.+ .++++.+
T Consensus 186 ------~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~-----~~~~G~I 254 (304)
T 4fk1_A 186 ------IMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCE-----LQSNGTF 254 (304)
T ss_dssp ------HHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCC-----CCTTSSS
T ss_pred ------hhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeE-----ECCCCCE
Confidence 00112222333444444444432 3788999999999888888777665443322211 2344445
Q ss_pred cceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHh
Q 010421 395 PLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLI 434 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l 434 (511)
.+..++ .++.||+|++|..... .....|-.|++.+|..+
T Consensus 255 ~vd~~~-~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i 295 (304)
T 4fk1_A 255 VIDDFG-RTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAI 295 (304)
T ss_dssp CSSTTC-BCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred EECcCC-ccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHH
Confidence 454433 4678999999986532 22445666777666544
No 34
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.94 E-value=1.3e-27 Score=242.68 Aligned_cols=289 Identities=14% Similarity=0.157 Sum_probs=186.2
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCC--cEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHN--PVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~--v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
++|+|||||++|+++|..| .|.+ |+|+|+++..+ |....+ ++.... . ..+.. ....
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~-------y~~~~l--~~~~~~--g-~~~~~--~~~~------ 62 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP-------YDRPSL--SKAVLD--G-SLERP--PILA------ 62 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS-------BCSGGG--GTHHHH--T-SSSSC--CBSS------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC-------cCCccc--cHHHhC--C-CCCHH--HhcC------
Confidence 5999999999999999999 7776 99999987653 211100 000000 0 00000 0000
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
...+.++.++ .++++++|+.++.. .++|.+.++. ++.||+||+|||. .|+
T Consensus 63 --~~~~~~~~~i--~~~~~~~v~~id~~------------------~~~v~~~~g~-----~~~~d~lvlAtG~---~p~ 112 (410)
T 3ef6_A 63 --EADWYGEARI--DMLTGPEVTALDVQ------------------TRTISLDDGT-----TLSADAIVIATGS---RAR 112 (410)
T ss_dssp --CTTHHHHTTC--EEEESCCEEEEETT------------------TTEEEETTSC-----EEECSEEEECCCE---EEC
T ss_pred --CHHHHHHCCC--EEEeCCEEEEEECC------------------CCEEEECCCC-----EEECCEEEEccCC---ccc
Confidence 1122345677 88999999999862 1357766654 7899999999994 578
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+. ..+++.....+... .......+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+.++..
T Consensus 113 ~~~ip---G~~~--~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtvv~~~~~~l~~ 181 (410)
T 3ef6_A 113 TMALP---GSQL--PGVVTLRTYGDVQV-LRDSWTSATRLLIVGGGLIGCEVATTARKLGLS-----VTILEAGDELLVR 181 (410)
T ss_dssp CCCCT---TTTS--TTEECCCSHHHHHH-HHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSSSSSHH
T ss_pred CCCCC---Cccc--cceEEeccHHHHHH-HHHHhccCCeEEEECCCHHHHHHHHHHHhCCCe-----EEEEecCCccchh
Confidence 88888 5441 12444333322110 011234689999999999999999999988754 9999998753210
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
... ...
T Consensus 182 ~~~-----------~~~--------------------------------------------------------------- 187 (410)
T 3ef6_A 182 VLG-----------RRI--------------------------------------------------------------- 187 (410)
T ss_dssp HHC-----------HHH---------------------------------------------------------------
T ss_pred hcC-----------HHH---------------------------------------------------------------
Confidence 000 000
Q ss_pred ccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCccc
Q 010421 321 IMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLP 395 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (511)
.+.+.+.+++.+|+++.+. +.+++.+ +|+++||+++++|.||+|||++++..+.+..+... + +++.
T Consensus 188 --~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~-----~--~gi~ 258 (410)
T 3ef6_A 188 --GAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLAC-----D--RGVI 258 (410)
T ss_dssp --HHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCB-----S--SSEE
T ss_pred --HHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCcc-----C--CeEE
Confidence 0111133445567887664 7788765 48899999999999999999999976543222211 1 2233
Q ss_pred ceeeecCCCCCceEEEeecccch----------hhhhHHHHHHHHHHHhcCCC
Q 010421 396 LYRGTIHPLIPNMAFVGYIESVS----------NLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 396 ly~~~~~~~~pnl~~iG~~~~~~----------~~~~~e~qa~~~a~~l~g~~ 438 (511)
+...+ .++.||+|++|...... .+..+..||+.+|+.+.|+.
T Consensus 259 vd~~~-~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 310 (410)
T 3ef6_A 259 VDHCG-ATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGKN 310 (410)
T ss_dssp CCTTS-BCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred EccCe-eECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCCC
Confidence 33332 35789999999765422 25789999999999998864
No 35
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.94 E-value=2.2e-26 Score=236.85 Aligned_cols=291 Identities=15% Similarity=0.189 Sum_probs=186.8
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+||+|||||++|+++|..| . +.+|+|||+++.+|..... .+ .+. ...+....++.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~--~~-----------~~~--------~~~~~~~~~~~ 61 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG--LS-----------AYF--------NHTINELHEAR 61 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC-------------------------------------C
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc--ch-----------hhh--------cCCCCCHHHhh
Confidence 6999999999999999999 4 8999999999877521110 00 000 00111111111
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+.....+++++ .++++++|++++.. ...+.+. ... ...++.||+||+||| ..|.
T Consensus 62 ~~~~~~~~~~gi--~~~~~~~V~~id~~----------------~~~v~v~--~~~--~~~~~~~d~lviAtG---~~p~ 116 (452)
T 3oc4_A 62 YITEEELRRQKI--QLLLNREVVAMDVE----------------NQLIAWT--RKE--EQQWYSYDKLILATG---ASQF 116 (452)
T ss_dssp CCCHHHHHHTTE--EEECSCEEEEEETT----------------TTEEEEE--ETT--EEEEEECSEEEECCC---CCBC
T ss_pred cCCHHHHHHCCC--EEEECCEEEEEECC----------------CCEEEEE--ecC--ceEEEEcCEEEECCC---cccC
Confidence 112233455676 77889999999873 3444443 111 223789999999999 5688
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|++| |.+. ..++++..+...... ......+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+.+ +|
T Consensus 117 ~p~i~---g~~~--~~v~~~~~~~~~~~~-~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtlv~~~~~~-l~ 184 (452)
T 3oc4_A 117 STQIR---GSQT--EKLLKYKFLSGALAA-VPLLENSQTVAVIGAGPIGMEAIDFLVKMKKT-----VHVFESLENL-LP 184 (452)
T ss_dssp CCCCB---TTTC--TTEEEGGGCC----C-CHHHHTCSEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSSS-ST
T ss_pred CCCCC---CCCC--CCEEEeCCHHHHHHH-HHHHhcCCEEEEECCCHHHHHHHHHHHhCCCe-----EEEEEccCcc-cc
Confidence 88888 6542 235665554332100 01234679999999999999999999998764 9999998763 22
Q ss_pred C-cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 241 H-YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 241 ~-~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
. .+ . .
T Consensus 185 ~~~d-------~----~--------------------------------------------------------------- 190 (452)
T 3oc4_A 185 KYFD-------K----E--------------------------------------------------------------- 190 (452)
T ss_dssp TTCC-------H----H---------------------------------------------------------------
T ss_pred ccCC-------H----H---------------------------------------------------------------
Confidence 2 11 0 0
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEe--CCc--EEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFW--KGG--LEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~--~~~--v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
+.+.+.+.+++.+|+++.+. +.+++ +++ |.+++| ++++|.||+|||++++..+++. . +..++++.+
T Consensus 191 --~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~----~--~~~~~~g~i 261 (452)
T 3oc4_A 191 --MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDK----K--IQRNLDQTI 261 (452)
T ss_dssp --HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCT----T--SCBCTTSCB
T ss_pred --HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHh----h--hccCCCCCE
Confidence 00111234566778888865 77776 333 556666 8999999999999999765321 1 112344445
Q ss_pred cceeeecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCC
Q 010421 395 PLYRGTIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~ 437 (511)
.+...+ .++.||+|++|..... .....+..|++.+|..+.|.
T Consensus 262 ~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g~ 314 (452)
T 3oc4_A 262 AVDAYL-QTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK 314 (452)
T ss_dssp CCCTTC-BCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSSC
T ss_pred EECcCc-cCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcCC
Confidence 554433 3578999999976543 24568999999999998875
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.94 E-value=1.2e-26 Score=245.76 Aligned_cols=298 Identities=16% Similarity=0.168 Sum_probs=192.1
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
++|+|||||++|+++|..| . +.+|+|||+++.++ |..+.+ | +.... ........+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l--~---~~~~~--------~~~~~~~~~~ 61 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGL--P---YHISG--------EIAQRSALVL 61 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--H---HHHTS--------SSCCGGGGBC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCc--h---HHhcC--------CcCChHHhhc
Confidence 5899999999999999999 3 78999999988764 111110 0 00000 1111233445
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
++++.+.+++++ .++++++|++++.. .. .+++.+..++...++.||+||+|||+ .|.
T Consensus 62 ~~~~~~~~~~~i--~~~~~~~V~~id~~----------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~---~p~ 118 (565)
T 3ntd_A 62 QTPESFKARFNV--EVRVKHEVVAIDRA----------------AK--LVTVRRLLDGSEYQESYDTLLLSPGA---API 118 (565)
T ss_dssp CCHHHHHHHHCC--EEETTEEEEEEETT----------------TT--EEEEEETTTCCEEEEECSEEEECCCE---EEC
T ss_pred cCHHHHHHhcCc--EEEECCEEEEEECC----------------CC--EEEEEecCCCCeEEEECCEEEECCCC---CCC
Confidence 667777888888 78899999999872 22 35555533334447899999999994 678
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhh-hhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEA-ASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
.|.+| |.+.. .+++........... ......+++|+|||+|.+|+|+|..|++.+.+ |+++.|++. ++
T Consensus 119 ~p~ip---G~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~-----Vtlv~~~~~-~l 187 (565)
T 3ntd_A 119 VPPIP---GVDNP--LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIK-----TTLLELADQ-VM 187 (565)
T ss_dssp CCCCT---TCCST--TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSS-SC
T ss_pred CCCCC---CCCCC--CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCc-----EEEEEcCCc-cc
Confidence 88888 65432 233333322211000 00124678999999999999999999988754 999999875 33
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
|... ... ..
T Consensus 188 ~~~~-----------~~~----------------------------~~-------------------------------- 196 (565)
T 3ntd_A 188 TPVD-----------REM----------------------------AG-------------------------------- 196 (565)
T ss_dssp TTSC-----------HHH----------------------------HH--------------------------------
T ss_pred hhcC-----------HHH----------------------------HH--------------------------------
Confidence 3221 000 00
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeC--------------------C---cEEEcCCceeeccEEEEecCCCCcccc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWK--------------------G---GLEFEDNTKLEADVVILCTGYDGKKKL 375 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--------------------~---~v~~~dG~~~~~D~VI~aTG~~~~~~~ 375 (511)
.+.+.+++.+|+++.+. +.+++. + .+++.||+++++|.||+|||++++..+
T Consensus 197 -----~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l 271 (565)
T 3ntd_A 197 -----FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQL 271 (565)
T ss_dssp -----HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHH
T ss_pred -----HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHH
Confidence 01123344456666553 555543 2 256788999999999999999998765
Q ss_pred cccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-------c----hhhhhHHHHHHHHHHHhcCCC
Q 010421 376 KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-------V----SNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-------~----~~~~~~e~qa~~~a~~l~g~~ 438 (511)
.+..+ +..++.+.+.+...+ .++.||+|++|.... . .....|..|++.+|..+.|+.
T Consensus 272 ~~~~g-----~~~~~~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 272 ARDAG-----LAIGELGGIKVNAMM-QTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp HHHHT-----CCBCTTSSBCCCTTC-BCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred HHhCC-----cccCCCCCEEECCCc-ccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 33111 111334444444433 357899999997642 1 235679999999999998753
No 37
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.94 E-value=2.8e-26 Score=240.08 Aligned_cols=305 Identities=16% Similarity=0.181 Sum_probs=198.0
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCc----cccCCCC-CCCCCCCCC
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSD----YEFTDFP-WPNRDDPGF 73 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~ 73 (511)
+..+||+|||||++|+++|.+| .|++|+|+|++..+||+|... ..|...+..+... -.+..+. ++.. ...+
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~ 119 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM-TEKV 119 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC-TTCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH-Hhhh
Confidence 4468999999999999999999 899999999988899998641 1121111000000 0011111 2221 1334
Q ss_pred CChHHHHHHHHH-------HH-----HhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 74 PSYTEILDYLES-------YA-----KHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 74 ~~~~~~~~yl~~-------~~-----~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
++..++.+++.. .. ++.++ .+.++.+|..++. ++|.+. +.
T Consensus 120 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--------------------~~v~~~-g~----- 171 (523)
T 1mo9_A 120 VGIKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--------------------HTVEAA-GK----- 171 (523)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--------------------TEEEET-TE-----
T ss_pred hhHHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--------------------CEEEEC-CE-----
Confidence 457777777653 33 55666 5665677776653 145553 21
Q ss_pred EEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccC-ccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhc
Q 010421 142 RYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYC-KLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESN 220 (511)
Q Consensus 142 ~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~-~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~ 220 (511)
.+.||+||+|||+ .|..|.+| |.+. . .++++.++. .+ ....+++|+|||+|.+|+|+|..+++.+
T Consensus 172 ~~~~d~lViATGs---~p~~p~i~---G~~~-~-~v~~~~~~~~~l------~~~~g~~vvViGgG~~g~E~A~~l~~~G 237 (523)
T 1mo9_A 172 VFKAKNLILAVGA---GPGTLDVP---GVNA-K-GVFDHATLVEEL------DYEPGSTVVVVGGSKTAVEYGCFFNATG 237 (523)
T ss_dssp EEEBSCEEECCCE---ECCCCCST---TTTS-B-TEEEHHHHHHHC------CSCCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEeCEEEECCCC---CCCCCCCC---Cccc-C-cEeeHHHHHHHH------HhcCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 6899999999994 67888888 6543 1 256666554 32 1234599999999999999999999887
Q ss_pred CCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcc
Q 010421 221 QGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLL 300 (511)
Q Consensus 221 ~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (511)
.+ |+++.|.+. ++|... ...
T Consensus 238 ~~-----Vtlv~~~~~-~l~~~~-----------~~~------------------------------------------- 257 (523)
T 1mo9_A 238 RR-----TVMLVRTEP-LKLIKD-----------NET------------------------------------------- 257 (523)
T ss_dssp CE-----EEEECSSCT-TTTCCS-----------HHH-------------------------------------------
T ss_pred Ce-----EEEEEecCc-cccccc-----------HHH-------------------------------------------
Confidence 54 999999875 233211 000
Q ss_pred cCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc------EEEcCCc-eeeccEEEEecCCC
Q 010421 301 KYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG------LEFEDNT-KLEADVVILCTGYD 370 (511)
Q Consensus 301 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~------v~~~dG~-~~~~D~VI~aTG~~ 370 (511)
...+.+.+++.+|+++.+. |.+++. ++ |+++||+ ++++|.||+|||++
T Consensus 258 ----------------------~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 258 ----------------------RAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp ----------------------HHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred ----------------------HHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 0011123445567777664 667754 44 5677887 79999999999999
Q ss_pred Cccc-ccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 371 GKKK-LKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 371 ~~~~-~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
++.. +++..+ +..++++.+.+..++ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 316 p~~~~~l~~~g-----l~~~~~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 378 (523)
T 1mo9_A 316 PRSAELAKILG-----LDLGPKGEVLVNEYL-QTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGE 378 (523)
T ss_dssp ECCHHHHHHHT-----CCBCTTSCBCCCTTS-BCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTTC
T ss_pred cCCccCHHHcC-----CccCCCCCEEECCCC-ccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 9975 332211 111233444444433 3578999999987653 44678999999999999874
No 38
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.94 E-value=2.4e-26 Score=238.77 Aligned_cols=309 Identities=16% Similarity=0.149 Sum_probs=193.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc-c--CCCcEEEc--------CCCCcCccccCC-CcCceeccCCCC----ccccCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL-R--HHNPVVFE--------ASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFP 64 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l-~--g~~v~v~e--------~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~ 64 (511)
|++.+||+|||||++|+++|..| . |++|+|+| +...+||+|... .+|...+..... ...+..+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 55568999999999999999999 5 89999999 357899998651 122211110000 00112222
Q ss_pred CCCCCCCC--CCChHHHHHHHHHHH-----------Hhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEE
Q 010421 65 WPNRDDPG--FPSYTEILDYLESYA-----------KHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEV 130 (511)
Q Consensus 65 ~~~~~~~~--~~~~~~~~~yl~~~~-----------~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v 130 (511)
+... .. .....++.++.+.+. ++. ++ .+..+ ++..++. ++|
T Consensus 84 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~--------------------~~v 138 (495)
T 2wpf_A 84 WEFD--GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLESK--------------------NVV 138 (495)
T ss_dssp EECC--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEET--------------------TEE
T ss_pred cccC--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEeeC--------------------CEE
Confidence 2110 01 223445555544433 233 44 44444 3544432 257
Q ss_pred EEEeCCC---CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCC
Q 010421 131 AVQTHNS---NSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKK 207 (511)
Q Consensus 131 ~~~~~~~---~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~ 207 (511)
.+.+..+ .....+.||+||+|||+ .|..|.+| |.+ .++++.++..+. ..+++|+|||+|.
T Consensus 139 ~v~~~~~~~~~~~~~~~~d~lViATGs---~p~~p~i~---G~~----~~~~~~~~~~~~-------~~~~~vvViGgG~ 201 (495)
T 2wpf_A 139 VVRETADPKSAVKERLQADHILLATGS---WPQMPAIP---GIE----HCISSNEAFYLP-------EPPRRVLTVGGGF 201 (495)
T ss_dssp EEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCCT---TGG----GCEEHHHHTTCS-------SCCSEEEEECSSH
T ss_pred EEeecCCccCCCCeEEEcCEEEEeCCC---CcCCCCCC---Ccc----ccccHHHHHhhh-------hcCCeEEEECCCH
Confidence 7763211 00127899999999994 57888888 653 256666665432 3578999999999
Q ss_pred CHHHHHHHHHHh---cCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHH
Q 010421 208 SAIDLAKECAES---NQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRG 284 (511)
Q Consensus 208 sg~d~a~~l~~~---~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (511)
+|+|+|..|++. +. +||++.|.+. ++|..+ . ..
T Consensus 202 ig~E~A~~l~~~~~~g~-----~Vtlv~~~~~-~l~~~d-------~----~~--------------------------- 237 (495)
T 2wpf_A 202 ISVEFAGIFNAYKPPGG-----KVTLCYRNNL-ILRGFD-------E----TI--------------------------- 237 (495)
T ss_dssp HHHHHHHHHHHHCCTTC-----EEEEEESSSS-SCTTSC-------H----HH---------------------------
T ss_pred HHHHHHHHHHhhCCCCC-----eEEEEEcCCc-cccccC-------H----HH---------------------------
Confidence 999999999998 65 4999999875 333321 0 00
Q ss_pred HHHHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCcee
Q 010421 285 VSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTKL 358 (511)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~~ 358 (511)
.+.+.+.+++.+|+++.+. |.+++.+ .|+++||+++
T Consensus 238 --------------------------------------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i 279 (495)
T 2wpf_A 238 --------------------------------------REEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTL 279 (495)
T ss_dssp --------------------------------------HHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEE
T ss_pred --------------------------------------HHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEE
Confidence 0011133455567887774 7777643 3678899999
Q ss_pred eccEEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 359 EADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 359 ~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
++|.||+|||++++...+. ..-.++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 280 ~~D~vv~a~G~~p~~~~L~---l~~~gl~~~~~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 280 DVDVVMMAIGRIPRTNDLQ---LGNVGVKLTPKGGVQVDEFS-RTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp EESEEEECSCEEECCGGGT---GGGTTCCBCTTSSBCCCTTC-BCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred EcCEEEECCCCcccccccc---hhhcCccCCCCCCEEECCCC-ccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999875211 01011111334445454433 357899999998765 334678999999999988764
No 39
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.94 E-value=1.2e-25 Score=233.24 Aligned_cols=309 Identities=12% Similarity=0.087 Sum_probs=193.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPNRDDPGF 73 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 73 (511)
|+..+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+..... ...+..+.++.. ...
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~--~~~ 80 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP--EPE 80 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC--CCc
Confidence 54568999999999999999999 899999999998999987541 111110000000 000111111110 111
Q ss_pred CChHHHHH-----------HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC-------
Q 010421 74 PSYTEILD-----------YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH------- 135 (511)
Q Consensus 74 ~~~~~~~~-----------yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------- 135 (511)
.....+.. .+...+++.++ .++.++.+. ++ .+.+.|...++
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~------------------~~~v~v~~~~g~~~~~~~ 139 (482)
T 1ojt_A 81 LDIDMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF-LD------------------PHHLEVSLTAGDAYEQAA 139 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE-EE------------------TTEEEEEEEEEEETTEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE-cc------------------CCEEEEEecCCccccccc
Confidence 22223322 23445566676 677766543 22 33455554443
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHH
Q 010421 136 NSNSIQRYGFEFLVVCTGKYGDVPIIPA-FPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAK 214 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~~~p~~p~-~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 214 (511)
.+++..++.||+||+|||.. |..|+ ++ . + ..++++.+...+. ..+++|+|||+|.+|+|+|.
T Consensus 140 ~~g~~~~i~ad~lViAtGs~---p~~~~~i~---~-~---~~v~~~~~~~~~~-------~~~~~vvViGgG~ig~E~A~ 202 (482)
T 1ojt_A 140 PTGEKKIVAFKNCIIAAGSR---VTKLPFIP---E-D---PRIIDSSGALALK-------EVPGKLLIIGGGIIGLEMGT 202 (482)
T ss_dssp EEEEEEEEEEEEEEECCCEE---ECCCSSCC---C-C---TTEECHHHHTTCC-------CCCSEEEEESCSHHHHHHHH
T ss_pred ccCcceEEEcCEEEECCCCC---CCCCCCCC---c-c---CcEEcHHHHhccc-------ccCCeEEEECCCHHHHHHHH
Confidence 11223478999999999964 56655 43 1 1 1366666654422 24799999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 010421 215 ECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLL 294 (511)
Q Consensus 215 ~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (511)
.|++.+.+ ||++.|.+. ++|..+ ..
T Consensus 203 ~l~~~G~~-----Vtlv~~~~~-~l~~~~-----------~~-------------------------------------- 227 (482)
T 1ojt_A 203 VYSTLGSR-----LDVVEMMDG-LMQGAD-----------RD-------------------------------------- 227 (482)
T ss_dssp HHHHHTCE-----EEEECSSSS-SSTTSC-----------HH--------------------------------------
T ss_pred HHHHcCCe-----EEEEEECCc-cccccC-----------HH--------------------------------------
Confidence 99998764 999999875 333221 00
Q ss_pred ccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--c--EEEcC----CceeeccEEEE
Q 010421 295 WKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--G--LEFED----NTKLEADVVIL 365 (511)
Q Consensus 295 ~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~--v~~~d----G~~~~~D~VI~ 365 (511)
+.+.+.+.+++.+|+++.+. +.+++.+ + |+++| |+++++|.||+
T Consensus 228 ---------------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~ 280 (482)
T 1ojt_A 228 ---------------------------LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV 280 (482)
T ss_dssp ---------------------------HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEE
T ss_pred ---------------------------HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEE
Confidence 00111234556678888875 7777643 2 66777 77899999999
Q ss_pred ecCCCCccccc--ccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 366 CTGYDGKKKLK--AFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 366 aTG~~~~~~~~--~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
|||++|+..++ +..+ +..+.++.+.+..++ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 281 a~G~~p~~~~l~~~~~g-----l~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 281 AAGRAPNGKLISAEKAG-----VAVTDRGFIEVDKQM-RTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp CCCEEECGGGTTGGGTT-----CCCCTTSCCCCCTTS-BCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CcCCCcCCCCCChhhcC-----ceeCCCCCEeeCCCc-ccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcCC
Confidence 99999997652 2111 111233445454433 3578999999987653 34578999999999999874
No 40
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.94 E-value=6.5e-26 Score=221.91 Aligned_cols=175 Identities=19% Similarity=0.214 Sum_probs=121.0
Q ss_pred CC-CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChH
Q 010421 1 MA-NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYT 77 (511)
Q Consensus 1 m~-~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (511)
|+ +.+||+||||||||++||.+| .|++|+|||+ ..+||++.... + ...++ ........
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~---~-------i~~~p--------~~~~~~~~ 62 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTE---E-------VENFP--------GFEMITGP 62 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCS---C-------BCCST--------TCSSBCHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeeccc---c-------cCCcC--------CccccchH
Confidence 65 369999999999999999999 8999999998 56888765310 0 00111 12234566
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
++.........++.. .+..+..+..... ... .+...++. ++.||+||+|||+
T Consensus 63 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----------------~~~-~~~~~~~~-----~~~~d~liiAtGs--- 114 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGA--VYQYGDIKSVEDK-----------------GEY-KVINFGNK-----ELTAKAVIIATGA--- 114 (312)
T ss_dssp HHHHHHHHHHHHTTC--EEEECCCCEEEEC-----------------SSC-EEEECSSC-----EEEEEEEEECCCE---
T ss_pred HHHHHHHHHHhhccc--cccceeeeeeeee-----------------ecc-eeeccCCe-----EEEeceeEEcccC---
Confidence 777666666666655 4555544444332 111 23333333 7999999999994
Q ss_pred CCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 158 VPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 158 ~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+.|++| |.+.+.++.++.....+ .....+|+|+|||+|.+|+|+|..|++.+.+ ||++.|++.
T Consensus 115 ~~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~-----Vtlv~~~~~ 179 (312)
T 4gcm_A 115 EYKKIGVP---GEQELGGRGVSYCAVCD------GAFFKNKRLFVIGGGDSAVEEGTFLTKFADK-----VTIVHRRDE 179 (312)
T ss_dssp EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCSE-----EEEECSSSS
T ss_pred ccCcCCCC---ChhhhCCccEEeeeccC------ccccCCCEEEEECCCHHHHHHHHHHHhcCCE-----EEEEecccc
Confidence 68888888 77777665555544433 2346789999999999999999999888754 999999875
No 41
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.94 E-value=3.6e-27 Score=239.22 Aligned_cols=289 Identities=12% Similarity=0.139 Sum_probs=183.3
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
++|+|||||++|+++|..| .|. +|+|||+++..+ |....+ ++..+... . .+ .. +.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~~l--~~~~l~~~-~-~~----~~------~~ 60 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRPPL--SKAYLKSG-G-DP----NS------LM 60 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSGGG--GTGGGGSC-C-CT----TS------SB
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCccC--CHHHHCCC-C-CH----HH------cc
Confidence 6899999999999999999 676 899999987552 211111 11111000 0 00 01 11
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+...+.+++++ .++. ++|+.++.. . ..|++.++. ++.||+||+|||. .|+
T Consensus 61 ~~~~~~~~~~~i--~~~~-~~v~~id~~----------------~--~~v~~~~g~-----~~~~d~lvlAtG~---~p~ 111 (404)
T 3fg2_P 61 FRPEKFFQDQAI--ELIS-DRMVSIDRE----------------G--RKLLLASGT-----AIEYGHLVLATGA---RNR 111 (404)
T ss_dssp SSCHHHHHHTTE--EEEC-CCEEEEETT----------------T--TEEEESSSC-----EEECSEEEECCCE---EEC
T ss_pred CCCHHHHHhCCC--EEEE-EEEEEEECC----------------C--CEEEECCCC-----EEECCEEEEeeCC---Ccc
Confidence 111223345666 6666 889988862 1 257766654 7899999999994 577
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+. . .+++.....+... .......+++|+|||+|.+|+|+|..+.+.+.+ |+++.+.+.++..
T Consensus 112 ~~~i~---g~~~-~-~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~-----Vtvv~~~~~~~~~ 180 (404)
T 3fg2_P 112 MLDVP---NASL-P-DVLYLRTLDESEV-LRQRMPDKKHVVVIGAGFIGLEFAATARAKGLE-----VDVVELAPRVMAR 180 (404)
T ss_dssp CCCST---TTTS-T-TEECCSSHHHHHH-HHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSSSTTTT
T ss_pred CCCCC---CCCC-C-cEEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE-----EEEEeCCCcchhh
Confidence 88888 5431 1 2332222211100 012234689999999999999999999988754 9999998753211
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
... ..
T Consensus 181 ~~~-----------~~---------------------------------------------------------------- 185 (404)
T 3fg2_P 181 VVT-----------PE---------------------------------------------------------------- 185 (404)
T ss_dssp TSC-----------HH----------------------------------------------------------------
T ss_pred ccC-----------HH----------------------------------------------------------------
Confidence 110 00
Q ss_pred ccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 321 IMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
+.+.+.+.+++.+|+++.+. |.+++.+ +|+++||+++++|.||+|||++++..+.+..+... + + ++
T Consensus 186 -~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~-----~-~-Gi 257 (404)
T 3fg2_P 186 -ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPT-----A-A-GI 257 (404)
T ss_dssp -HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCB-----S-S-SE
T ss_pred -HHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCC-----C-C-CE
Confidence 00111234556678888774 7777653 48889999999999999999999976543222211 1 2 23
Q ss_pred cceeeecCCCCCceEEEeecccch-----------hhhhHHHHHHHHHHHhcCCC
Q 010421 395 PLYRGTIHPLIPNMAFVGYIESVS-----------NLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~~a~~l~g~~ 438 (511)
.+...+ .++.||+|++|...... .+..+..||+.+|+.+.|+.
T Consensus 258 ~vd~~~-~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 311 (404)
T 3fg2_P 258 IVDQQL-LTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDA 311 (404)
T ss_dssp EECTTS-BCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTCC
T ss_pred EECCCc-ccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCCC
Confidence 333322 35789999999765422 25789999999999998864
No 42
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.8e-26 Score=237.30 Aligned_cols=294 Identities=19% Similarity=0.231 Sum_probs=182.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCCh
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
|+ .+||+|||||++|+++|..| . +.+|+|||+++.+++.... .|. . .......
T Consensus 1 M~-~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~---------~p~------------~-~~~~~~~ 57 (449)
T 3kd9_A 1 MS-LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCG---------IPY------------V-VEGLSTP 57 (449)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC--------------------------------------
T ss_pred CC-cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcC---------Ccc------------c-cCCCCCH
Confidence 53 57999999999999999999 3 7899999998766422110 000 0 0111122
Q ss_pred HHHHHH-HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 77 TEILDY-LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 77 ~~~~~y-l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.++..+ .+.+++++++ .++++++|++++. ..+.|.+.++ ..++.||+||+|||.
T Consensus 58 ~~~~~~~~~~~~~~~gi--~v~~~~~v~~i~~------------------~~~~v~~~~g----~~~~~~d~lviAtG~- 112 (449)
T 3kd9_A 58 DKLMYYPPEVFIKKRGI--DLHLNAEVIEVDT------------------GYVRVRENGG----EKSYEWDYLVFANGA- 112 (449)
T ss_dssp --------CTHHHHTTC--EEETTCEEEEECS------------------SEEEEECSSS----EEEEECSEEEECCCE-
T ss_pred HHhhhcCHHHHHHhcCc--EEEecCEEEEEec------------------CCCEEEECCc----eEEEEcCEEEECCCC-
Confidence 233332 2444567888 8899999998865 2245543222 236899999999994
Q ss_pred CCCCCCCCCCCCCCCCcccceEEeccccCccch-hhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 156 GDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDK-EAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 156 ~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~-~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
.|..|.+| |.+. . .++.......... ......+.+++|+|||+|.+|+|+|..+++.+.+ |+++.|+
T Consensus 113 --~p~~p~i~---G~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtlv~~~ 180 (449)
T 3kd9_A 113 --SPQVPAIE---GVNL-K-GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKN-----VTMIVRG 180 (449)
T ss_dssp --EECCCSCB---TTTS-T-TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESS
T ss_pred --CCCCCCCC---CCCC-C-CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCe-----EEEEEcC
Confidence 67888888 5442 1 1332222211100 0011223789999999999999999999998754 9999998
Q ss_pred CceeecC-cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccc
Q 010421 235 THWTVPH-YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEED 313 (511)
Q Consensus 235 ~~~~~p~-~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 313 (511)
+.+ ++. .+ ... .
T Consensus 181 ~~~-l~~~~~-----------~~~----------------------------~--------------------------- 193 (449)
T 3kd9_A 181 ERV-LRRSFD-----------KEV----------------------------T--------------------------- 193 (449)
T ss_dssp SST-TTTTSC-----------HHH----------------------------H---------------------------
T ss_pred Ccc-chhhcC-----------HHH----------------------------H---------------------------
Confidence 753 222 11 000 0
Q ss_pred cccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc---EEEcCCceeeccEEEEecCCCCcccccccCCCcccccccC
Q 010421 314 YASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG---LEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEH 389 (511)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~---v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~ 389 (511)
+.+.+.+++. |+++.+. +.+++.++ .++.||+++++|.||+|||++++..+.+.++.. .+
T Consensus 194 ----------~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~-----~~ 257 (449)
T 3kd9_A 194 ----------DILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVR-----IG 257 (449)
T ss_dssp ----------HHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCC-----BC
T ss_pred ----------HHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCcc-----CC
Confidence 0111234455 6777664 67776553 456788889999999999999987654322221 12
Q ss_pred CCCcccceeeecCCCCCceEEEeeccc-----------chhhhhHHHHHHHHHHHhcCCC
Q 010421 390 PSGLLPLYRGTIHPLIPNMAFVGYIES-----------VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 390 ~~~~~~ly~~~~~~~~pnl~~iG~~~~-----------~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+.+.+.+... +.++.||+|++|.... +...+.+..|++.+|..+.|+.
T Consensus 258 ~~G~i~vd~~-~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g~~ 316 (449)
T 3kd9_A 258 ETGAIWTNEK-MQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAGKE 316 (449)
T ss_dssp TTSSBCCCTT-CBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEECCC-CccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcCCC
Confidence 3344444433 2357899999997642 1345689999999999998753
No 43
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.94 E-value=3e-26 Score=236.98 Aligned_cols=308 Identities=15% Similarity=0.126 Sum_probs=188.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCccc-----cCCCCCCCCCCCCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDYE-----FTDFPWPNRDDPGFPS 75 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 75 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+......+. +..+.++.. ......
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGG-EGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECG-GGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 47999999999999999999 899999999998999998641 111110000000000 110111100 000111
Q ss_pred hHHH-----------HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEE
Q 010421 76 YTEI-----------LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYG 144 (511)
Q Consensus 76 ~~~~-----------~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 144 (511)
..++ ...+....++.++ .++.++.+ .++ .+.++|...++ ...++.
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i~------------------~~~~~v~~~~G---~~~~~~ 136 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEGS-FET------------------AHSIRVNGLDG---KQEMLE 136 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEE-EEE------------------TTEEEEEETTS---CEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-Eee------------------CCEEEEEecCC---ceEEEE
Confidence 2222 2233455566677 66666543 343 23344543222 223789
Q ss_pred eCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCC
Q 010421 145 FEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPE 224 (511)
Q Consensus 145 ~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~ 224 (511)
||+||+|||. .|..|+++ |.+. . .++++.++..+. ..+++|+|||+|.+|+|+|..+++.+.+
T Consensus 137 ~d~lviAtG~---~p~~p~~~---g~~~-~-~v~t~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g~~-- 199 (468)
T 2qae_A 137 TKKTIIATGS---EPTELPFL---PFDE-K-VVLSSTGALALP-------RVPKTMVVIGGGVIGLELGSVWARLGAE-- 199 (468)
T ss_dssp EEEEEECCCE---EECCBTTB---CCCS-S-SEECHHHHHTCS-------SCCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred cCEEEECCCC---CcCCCCCC---CCCc-C-ceechHHHhhcc-------cCCceEEEECCCHHHHHHHHHHHHhCCE--
Confidence 9999999995 57777777 5432 1 366665554321 3579999999999999999999988754
Q ss_pred CCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCC
Q 010421 225 GQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGL 304 (511)
Q Consensus 225 ~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (511)
|+++.|.+. ++|..+ ...
T Consensus 200 ---Vtlv~~~~~-~l~~~d-----------~~~----------------------------------------------- 217 (468)
T 2qae_A 200 ---VTVVEFAPR-CAPTLD-----------EDV----------------------------------------------- 217 (468)
T ss_dssp ---EEEECSSSS-SSTTSC-----------HHH-----------------------------------------------
T ss_pred ---EEEEecCCc-ccccCC-----------HHH-----------------------------------------------
Confidence 999999875 333321 000
Q ss_pred CCCCccccccccccccccCCchhhhh-ccCeEEEEeCc-eeEEeCCc----EEEc--CC--ceeeccEEEEecCCCCccc
Q 010421 305 KPDHPFEEDYASCQMAIMPEGFFSEA-EKGKIVFKRAS-KWWFWKGG----LEFE--DN--TKLEADVVILCTGYDGKKK 374 (511)
Q Consensus 305 ~p~~~~~~~~~~~~~~~~~~~~~~~l-~~g~v~v~~~~-i~~~~~~~----v~~~--dG--~~~~~D~VI~aTG~~~~~~ 374 (511)
.+.+.+.+ ++.+|+++.+. +.+++.++ |.++ || +++++|.||+|||++++..
T Consensus 218 ------------------~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 218 ------------------TNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp ------------------HHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred ------------------HHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 00111334 55567777764 77776432 4554 77 5699999999999999876
Q ss_pred ccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc--chhhhhHHHHHHHHHHHhcCC
Q 010421 375 LKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES--VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~--~~~~~~~e~qa~~~a~~l~g~ 437 (511)
++. ..-.++..++.+.+.+..++ .++.||+|++|.... +...+.+..|++.+|..+.|+
T Consensus 280 ~l~---l~~~gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 280 GLG---LDKINVAKNERGFVKIGDHF-ETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp TSC---HHHHTCCBCTTSCBCCCTTS-BCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCC---chhcCCccCCCCCEeECCCc-ccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcCC
Confidence 421 01011111233445454443 357899999998766 345678999999999999875
No 44
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.94 E-value=1.2e-26 Score=240.98 Aligned_cols=295 Identities=19% Similarity=0.202 Sum_probs=188.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC---CCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH---HNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g---~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
.+||+|||||++|+++|..| .| .+|+|+|+++.++..+.. .+ .. .... ... .++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~--~~---~~-------~~~~-~~~--------~~~ 93 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG--MA---LW-------IGEQ-IAG--------PEG 93 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG--HH---HH-------HTTS-SSC--------SGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc--cc---hh-------hcCc-cCC--------HHH
Confidence 47999999999999999999 56 999999998766432211 00 00 0000 000 000
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEE-eCCCCceeEEEeCEEEEeecccCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQ-THNSNSIQRYGFEFLVVCTGKYGD 157 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~d~vVlAtG~~~~ 157 (511)
+.......++++++ .++++++|+.++.. .+. |.+. ++ ...++.||+||+|||.
T Consensus 94 ~~~~~~~~~~~~gv--~v~~~~~v~~i~~~----------------~~~--v~v~~~g---~~~~~~~d~lviAtG~--- 147 (490)
T 2bc0_A 94 LFYSDKEELESLGA--KVYMESPVQSIDYD----------------AKT--VTALVDG---KNHVETYDKLIFATGS--- 147 (490)
T ss_dssp GBSCCHHHHHHTTC--EEETTCCEEEEETT----------------TTE--EEEEETT---EEEEEECSEEEECCCE---
T ss_pred hhhcCHHHHHhCCC--EEEeCCEEEEEECC----------------CCE--EEEEeCC---cEEEEECCEEEECCCC---
Confidence 11111233455677 77889999999862 233 4444 32 1236899999999994
Q ss_pred CCCCCCCCCCCCCC------ccc---ceEEeccccCccchhhhhhc--cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCC
Q 010421 158 VPIIPAFPNNKGPE------VFE---GQVLHSIDYCKLDKEAASQL--LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQ 226 (511)
Q Consensus 158 ~p~~p~~~~~~g~~------~~~---g~~~hs~~~~~~~~~~~~~~--~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~ 226 (511)
.|..|.+| |.+ .|. ..++++..+.+..... ... ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 148 ~p~~p~i~---G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~---- 219 (490)
T 2bc0_A 148 QPILPPIK---GAEIKEGSLEFEATLENLQFVKLYQNSADVI-AKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE---- 219 (490)
T ss_dssp EECCCSCB---TCCBCTTCTTCCBSSTTEEECSSHHHHHHHH-HHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCE----
T ss_pred CcCCCCCC---CccccccccccccccCCEEEeCCHHHHHHHH-HHhhhcCCceEEEECCCHHHHHHHHHHHHCCCe----
Confidence 57888888 554 332 2366655443321100 111 5689999999999999999999988754
Q ss_pred cEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCC
Q 010421 227 PCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKP 306 (511)
Q Consensus 227 ~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p 306 (511)
||++.|++.+ +|+.. +. .
T Consensus 220 -Vtlv~~~~~~-l~~~~------~~----~-------------------------------------------------- 237 (490)
T 2bc0_A 220 -VVLIDVVDTC-LAGYY------DR----D-------------------------------------------------- 237 (490)
T ss_dssp -EEEEESSSST-TTTTS------CH----H--------------------------------------------------
T ss_pred -EEEEEcccch-hhhHH------HH----H--------------------------------------------------
Confidence 9999998752 22110 00 0
Q ss_pred CCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEcCCceeeccEEEEecCCCCcccccccCCC
Q 010421 307 DHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFEDNTKLEADVVILCTGYDGKKKLKAFLPE 381 (511)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~ 381 (511)
+.+.+.+.+++.+|+++.+. +.+++.++ |.+ ||+++++|.||+|||++++..+++..
T Consensus 238 ---------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-- 299 (490)
T 2bc0_A 238 ---------------LTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-- 299 (490)
T ss_dssp ---------------HHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC--
T ss_pred ---------------HHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh--
Confidence 00111234556678888774 77887654 444 78889999999999999997653311
Q ss_pred cccccccCCCCcccceeeecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCCC
Q 010421 382 PFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 382 ~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+..+.++.+.+...+ .++.||+|++|..... .....|..|++.+|..+.|..
T Consensus 300 ----l~~~~~G~I~Vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 362 (490)
T 2bc0_A 300 ----IDLFRNGAFLVNKRQ-ETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACGTD 362 (490)
T ss_dssp ----SCBCTTSCBCCCTTC-BCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTTCC
T ss_pred ----hccCCCCCEEECCCc-ccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcCCC
Confidence 111233444444433 3578999999976542 245689999999999998753
No 45
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.94 E-value=4.5e-27 Score=234.99 Aligned_cols=282 Identities=15% Similarity=0.129 Sum_probs=184.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
..||+|||||++|+++|..| .| +|+|+|+++..+ +.. +.+. . ..... ...+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~---~~l~----~---~~~g~----------~~~~~~~~ 64 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSK---PMLS----H---YIAGF----------IPRNRLFP 64 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCS---TTHH----H---HHTTS----------SCGGGGCS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--ccc---chhH----H---HHhCC----------CCHHHhcc
Confidence 36999999999999999999 77 999999976542 111 1000 0 00000 01111212
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
+...+.+++++ .++++++|+.++.. .++|+ .++. ++.||+||+|||+ .|+.
T Consensus 65 ~~~~~~~~~~v--~~~~g~~v~~id~~------------------~~~V~-~~g~-----~~~~d~lViATGs---~p~~ 115 (367)
T 1xhc_A 65 YSLDWYRKRGI--EIRLAEEAKLIDRG------------------RKVVI-TEKG-----EVPYDTLVLATGA---RARE 115 (367)
T ss_dssp SCHHHHHHHTE--EEECSCCEEEEETT------------------TTEEE-ESSC-----EEECSEEEECCCE---EECC
T ss_pred CCHHHHHhCCc--EEEECCEEEEEECC------------------CCEEE-ECCc-----EEECCEEEECCCC---CCCC
Confidence 22334456777 78888889988862 24566 4443 7999999999994 6788
Q ss_pred CCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecC
Q 010421 162 PAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPH 241 (511)
Q Consensus 162 p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~ 241 (511)
|.+| |.+ .++++..+.+.... ......+++|+|||+|.+|+|+|..|++.+.+ ||++.|.+. ++|
T Consensus 116 p~i~---G~~----~v~~~~~~~~~~~l-~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtlv~~~~~-~l~- 180 (367)
T 1xhc_A 116 PQIK---GKE----YLLTLRTIFDADRI-KESIENSGEAIIIGGGFIGLELAGNLAEAGYH-----VKLIHRGAM-FLG- 180 (367)
T ss_dssp CCSB---TGG----GEECCCSHHHHHHH-HHHHHHHSEEEEEECSHHHHHHHHHHHHTTCE-----EEEECSSSC-CTT-
T ss_pred CCCC---CcC----CEEEEcCHHHHHHH-HHHhhcCCcEEEECCCHHHHHHHHHHHhCCCE-----EEEEeCCCe-ecc-
Confidence 8888 622 35554443321100 00111458999999999999999999988754 999999874 222
Q ss_pred cccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccc
Q 010421 242 YRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAI 321 (511)
Q Consensus 242 ~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~ 321 (511)
.+ ....
T Consensus 181 ~~-----------~~~~--------------------------------------------------------------- 186 (367)
T 1xhc_A 181 LD-----------EELS--------------------------------------------------------------- 186 (367)
T ss_dssp CC-----------HHHH---------------------------------------------------------------
T ss_pred CC-----------HHHH---------------------------------------------------------------
Confidence 11 0000
Q ss_pred cCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceeee
Q 010421 322 MPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGT 400 (511)
Q Consensus 322 ~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~ 400 (511)
+.+.+.+++.+|+++.+. +.+++.++|+++||+ +++|.||+|||++++..+.+.++... + +.+.+...+
T Consensus 187 --~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~-----~--~gi~Vd~~~ 256 (367)
T 1xhc_A 187 --NMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHT-----G--RGILIDDNF 256 (367)
T ss_dssp --HHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECCHHHHHTTCCB-----S--SSEECCTTS
T ss_pred --HHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCC-----C--CCEEECCCc
Confidence 011134556678888874 888887889999998 99999999999999976543222111 1 123333322
Q ss_pred cCCCCCceEEEeeccc-----chhhhhHHHHHHHHHHHhcCC
Q 010421 401 IHPLIPNMAFVGYIES-----VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 401 ~~~~~pnl~~iG~~~~-----~~~~~~~e~qa~~~a~~l~g~ 437 (511)
.++.||+|++|.... ...++.+..|++.+|..+.|.
T Consensus 257 -~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 257 -RTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp -BCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred -ccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 357899999997743 234678999999999999875
No 46
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.94 E-value=2.3e-26 Score=239.24 Aligned_cols=309 Identities=17% Similarity=0.134 Sum_probs=182.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCccc-----cCCCCCCCCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDYE-----FTDFPWPNRDDPGFP 74 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 74 (511)
+.+||+|||||++|+++|..| .|++|+|+|+++.+||+|... .+|...+..+...+. +..+.++.. ....
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~--~~~~ 101 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA--NPKL 101 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC--CCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC--CCcc
Confidence 458999999999999999999 899999999999999998751 222221111111110 111111110 1111
Q ss_pred ChHHHHHH-----------HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEE
Q 010421 75 SYTEILDY-----------LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRY 143 (511)
Q Consensus 75 ~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 143 (511)
....+..+ +....++.++ .+..+. +..++ .+.+.| ... +++..++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~~------------------~~~~~v--~~~-~g~~~~~ 157 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQGT-GKVLG------------------QGKVSV--TNE-KGEEQVL 157 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECS------------------SSEEEE--ECT-TSCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEE-EEEec------------------CCEEEE--EeC-CCceEEE
Confidence 22233222 2223334444 333332 22111 233344 332 2334479
Q ss_pred EeCEEEEeecccCCCCCCCCCCCCCCCCc-ccce-EEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC
Q 010421 144 GFEFLVVCTGKYGDVPIIPAFPNNKGPEV-FEGQ-VLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ 221 (511)
Q Consensus 144 ~~d~vVlAtG~~~~~p~~p~~~~~~g~~~-~~g~-~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 221 (511)
.||+||+|||.. | |.+| |.+. +.+. ++++.+... ....+++|+|||+|.+|+|+|..|++.+.
T Consensus 158 ~~d~lViATGs~---p--~~ip---g~~~~~~~~~~~~~~~~~~-------~~~~~~~vvViGgG~~g~E~A~~l~~~g~ 222 (491)
T 3urh_A 158 EAKNVVIATGSD---V--AGIP---GVEVAFDEKTIVSSTGALA-------LEKVPASMIVVGGGVIGLELGSVWARLGA 222 (491)
T ss_dssp ECSEEEECCCEE---C--CCBT---TBCCCCCSSSEECHHHHTS-------CSSCCSEEEEECCSHHHHHHHHHHHHHTC
T ss_pred EeCEEEEccCCC---C--CCCC---CcccccCCeeEEehhHhhh-------hhhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 999999999964 3 2345 4432 3333 333333332 22467999999999999999999999876
Q ss_pred CCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCccc
Q 010421 222 GPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLK 301 (511)
Q Consensus 222 ~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (511)
+ |+++.|.+.. +|..+ ...
T Consensus 223 ~-----Vtlv~~~~~~-l~~~d-----------~~~-------------------------------------------- 241 (491)
T 3urh_A 223 K-----VTVVEFLDTI-LGGMD-----------GEV-------------------------------------------- 241 (491)
T ss_dssp E-----EEEECSSSSS-SSSSC-----------HHH--------------------------------------------
T ss_pred E-----EEEEeccccc-cccCC-----------HHH--------------------------------------------
Confidence 4 9999998752 23221 000
Q ss_pred CCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--c--EEEcC---C--ceeeccEEEEecCCCC
Q 010421 302 YGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--G--LEFED---N--TKLEADVVILCTGYDG 371 (511)
Q Consensus 302 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~--v~~~d---G--~~~~~D~VI~aTG~~~ 371 (511)
.+.+.+.+++.+|+++.+. +.+++.+ + |.+.+ | +++++|.||+|||++|
T Consensus 242 ---------------------~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 242 ---------------------AKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp ---------------------HHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred ---------------------HHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 0011233455567777764 6666543 2 55553 5 4699999999999999
Q ss_pred cccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCCC
Q 010421 372 KKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+..++. ..-.++..++++.+.+...+ .++.||||++|.... +...+.+..|++.+|..+.|+.
T Consensus 301 ~~~~l~---l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 301 STDGLG---LAKAGVVLDSRGRVEIDRHF-QTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp CCTTSC---HHHHTCCBCTTSCBCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCccC---chhcCceECCCCCEeECCCC-CCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCCC
Confidence 876421 11111222334445554443 367899999998763 4456789999999999998753
No 47
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.93 E-value=7.3e-26 Score=233.42 Aligned_cols=302 Identities=17% Similarity=0.176 Sum_probs=186.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPNRDDPGF 73 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 73 (511)
|++.+||+|||||++|+++|.+| .|++|+|||++ .+||+|... ..|...+..... ......+.++.. ...
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~--~~~ 77 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS--GGT 77 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC-----
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC--CCC
Confidence 66679999999999999999999 89999999997 789998641 112111000000 000111111110 111
Q ss_pred CChHHHHHHHHHH-----------HHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeE
Q 010421 74 PSYTEILDYLESY-----------AKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQR 142 (511)
Q Consensus 74 ~~~~~~~~yl~~~-----------~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 142 (511)
....++.++.+.+ .++.++ .+..+ ++..++. ++|.+ ++. +
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~~--------------------~~v~~-~g~-----~ 128 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVDA--------------------HTIEV-EGQ-----R 128 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET--------------------TEEEE-TTE-----E
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEccC--------------------CEEEE-CCE-----E
Confidence 2333444333332 234455 44444 3433332 24666 322 7
Q ss_pred EEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCC
Q 010421 143 YGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQG 222 (511)
Q Consensus 143 ~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 222 (511)
+.||+||+|||. .|..|.+| |.+ .++++.++..+ ...+++|+|||+|.+|+|+|..|++.+.+
T Consensus 129 ~~~d~lviAtGs---~p~~p~i~---G~~----~~~~~~~~~~~-------~~~~~~vvVvGgG~~g~e~A~~l~~~G~~ 191 (463)
T 2r9z_A 129 LSADHIVIATGG---RPIVPRLP---GAE----LGITSDGFFAL-------QQQPKRVAIIGAGYIGIELAGLLRSFGSE 191 (463)
T ss_dssp EEEEEEEECCCE---EECCCSCT---TGG----GSBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEcCEEEECCCC---CCCCCCCC---Ccc----ceecHHHHhhh-------hccCCEEEEECCCHHHHHHHHHHHhcCCE
Confidence 899999999994 57788888 653 24455544332 13478999999999999999999988754
Q ss_pred CCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccC
Q 010421 223 PEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKY 302 (511)
Q Consensus 223 ~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (511)
|+++.|++.. ++..+ . ...
T Consensus 192 -----Vtlv~~~~~~-l~~~~-------~----~~~-------------------------------------------- 210 (463)
T 2r9z_A 192 -----VTVVALEDRL-LFQFD-------P----LLS-------------------------------------------- 210 (463)
T ss_dssp -----EEEECSSSSS-STTSC-------H----HHH--------------------------------------------
T ss_pred -----EEEEEcCCcc-ccccC-------H----HHH--------------------------------------------
Confidence 9999998652 22211 0 000
Q ss_pred CCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEcCCc-eeeccEEEEecCCCCccccc
Q 010421 303 GLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFEDNT-KLEADVVILCTGYDGKKKLK 376 (511)
Q Consensus 303 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~dG~-~~~~D~VI~aTG~~~~~~~~ 376 (511)
+.+.+.+++.+|+++.+. +.+++.+ .|+++||+ ++++|.||+|||++++...+
T Consensus 211 ---------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l 269 (463)
T 2r9z_A 211 ---------------------ATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDL 269 (463)
T ss_dssp ---------------------HHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTS
T ss_pred ---------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCC
Confidence 011123445567777764 7777542 37788999 89999999999999987521
Q ss_pred ccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 377 AFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
...-.++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 270 ---~~~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 270 ---GLEAAGIEVQSNGMVPTDAYQ-NTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp ---CHHHHTCCCCTTSCCCCCTTS-BCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ---CchhcCCccCCCCCEeECCCC-ccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcCC
Confidence 100011111334445454443 467899999998764 334678999999999988764
No 48
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.93 E-value=6.4e-27 Score=237.46 Aligned_cols=287 Identities=13% Similarity=0.095 Sum_probs=184.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
+.+||+|||||++|+++|..| .|. +|+|+|+++.++ |..+. .++....- .. ++ ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~~--~~~~~~~~-~~--~~---~~------ 64 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRPP--LSKDFMAH-GD--AE---KI------ 64 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSGG--GGTHHHHH-CC--GG---GS------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCCC--CCHHHhCC-Cc--hh---hh------
Confidence 357999999999999999999 666 599999987552 11110 00000000 00 00 00
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+++ .++++++ .++++++|+.++.. .++|++.++. ++.||+||+|||. .
T Consensus 65 ---~~~-~~~~~~v--~~~~~~~v~~i~~~------------------~~~v~~~~g~-----~~~~d~lviAtG~---~ 112 (408)
T 2gqw_A 65 ---RLD-CKRAPEV--EWLLGVTAQSFDPQ------------------AHTVALSDGR-----TLPYGTLVLATGA---A 112 (408)
T ss_dssp ---BCC-CTTSCSC--EEEETCCEEEEETT------------------TTEEEETTSC-----EEECSEEEECCCE---E
T ss_pred ---hHH-HHHHCCC--EEEcCCEEEEEECC------------------CCEEEECCCC-----EEECCEEEECCCC---C
Confidence 001 2234566 78888889998852 2467776553 7899999999994 5
Q ss_pred CCCCCC-CCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCce
Q 010421 159 PIIPAF-PNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 159 p~~p~~-~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~ 237 (511)
|..|.+ | |.+ . .+++.....+... .......+++|+|||+|.+|+|+|..|++.+.+ ||++.|.+.
T Consensus 113 ~~~~~i~~---G~~--~-~v~~~~~~~~~~~-l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtlv~~~~~- 179 (408)
T 2gqw_A 113 PRALPTLQ---GAT--M-PVHTLRTLEDARR-IQAGLRPQSRLLIVGGGVIGLELAATARTAGVH-----VSLVETQPR- 179 (408)
T ss_dssp ECCCGGGT---TCS--S-CEEECCSHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSS-
T ss_pred CCCCCccC---CCC--C-cEEEECCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE-----EEEEEeCCc-
Confidence 788887 8 654 2 2444333222110 001223589999999999999999999988754 999999875
Q ss_pred eecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccc
Q 010421 238 TVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASC 317 (511)
Q Consensus 238 ~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~ 317 (511)
++|+.. + ...
T Consensus 180 ~l~~~~------~----~~~------------------------------------------------------------ 189 (408)
T 2gqw_A 180 LMSRAA------P----ATL------------------------------------------------------------ 189 (408)
T ss_dssp SSTTTS------C----HHH------------------------------------------------------------
T ss_pred cccccc------C----HHH------------------------------------------------------------
Confidence 233210 0 000
Q ss_pred cccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccc
Q 010421 318 QMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPL 396 (511)
Q Consensus 318 ~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~l 396 (511)
.+.+.+.+++.+|+++.+. +.++++++|+++||+++++|.||+|||++++..+.+..+.. .+ + ++.+
T Consensus 190 -----~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~-----~~-~-gi~V 257 (408)
T 2gqw_A 190 -----ADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLA-----CD-D-GIFV 257 (408)
T ss_dssp -----HHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCC-----BS-S-SEEC
T ss_pred -----HHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCC-----CC-C-CEEE
Confidence 0011123455567888774 77887557889999999999999999999987654322211 11 2 2444
Q ss_pred eeeecCCCCCceEEEeecccch-----------hhhhHHHHHHHHHHHhcCCC
Q 010421 397 YRGTIHPLIPNMAFVGYIESVS-----------NLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 397 y~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~~a~~l~g~~ 438 (511)
..++ .++.||+|++|...... .+..+..||+.+|..+.|+.
T Consensus 258 d~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~ 309 (408)
T 2gqw_A 258 DAYG-RTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPT 309 (408)
T ss_dssp CTTC-BCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTT
T ss_pred CCCC-ccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCC
Confidence 4433 35789999999765421 35679999999999998754
No 49
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.1e-26 Score=235.67 Aligned_cols=305 Identities=17% Similarity=0.154 Sum_probs=185.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCc----cccCCCCCCCC---CC-C
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSD----YEFTDFPWPNR---DD-P 71 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~~~---~~-~ 71 (511)
+.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+...... .....+.+... .. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 358999999999999999999 89999999996 789998641 1111100000000 00011111100 00 0
Q ss_pred CCCChHHHHHHH-----------HHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCce
Q 010421 72 GFPSYTEILDYL-----------ESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSI 140 (511)
Q Consensus 72 ~~~~~~~~~~yl-----------~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (511)
......++.++. ....++.++ .+..+ ++..++ ...+.|...++ +.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~------------------~~~~~v~~~~g---~~ 144 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFNK------------------DGNVEVQKRDN---TT 144 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEECT------------------TSCEEEEESSS---CC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEee------------------CCEEEEEeCCC---cE
Confidence 112233333332 233334444 44444 343321 23344544332 22
Q ss_pred eEEEeCEEEEeecccCCCCCCC-CCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHh
Q 010421 141 QRYGFEFLVVCTGKYGDVPIIP-AFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAES 219 (511)
Q Consensus 141 ~~~~~d~vVlAtG~~~~~p~~p-~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~ 219 (511)
.++.||+||+|||. .|..| .+| |.+ .++++.++..+ ...+++|+|||+|.+|+|+|..|++.
T Consensus 145 ~~~~~d~lviAtGs---~p~~p~~i~---g~~----~~~~~~~~~~l-------~~~~~~vvViGgG~ig~E~A~~l~~~ 207 (479)
T 2hqm_A 145 EVYSANHILVATGG---KAIFPENIP---GFE----LGTDSDGFFRL-------EEQPKKVVVVGAGYIGIELAGVFHGL 207 (479)
T ss_dssp EEEEEEEEEECCCE---EECCCTTST---TGG----GSBCHHHHHHC-------SSCCSEEEEECSSHHHHHHHHHHHHT
T ss_pred EEEEeCEEEEcCCC---CCCCCCCCC---Ccc----cccchHHHhcc-------cccCCeEEEECCCHHHHHHHHHHHHc
Confidence 36899999999994 57788 788 653 23454444332 13578999999999999999999988
Q ss_pred cCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCc
Q 010421 220 NQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPL 299 (511)
Q Consensus 220 ~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (511)
+.+ |+++.|.+.. +|..+ ....
T Consensus 208 g~~-----Vtlv~~~~~~-l~~~d-----------~~~~----------------------------------------- 229 (479)
T 2hqm_A 208 GSE-----THLVIRGETV-LRKFD-----------ECIQ----------------------------------------- 229 (479)
T ss_dssp TCE-----EEEECSSSSS-CTTSC-----------HHHH-----------------------------------------
T ss_pred CCc-----eEEEEeCCcc-ccccC-----------HHHH-----------------------------------------
Confidence 754 9999998752 33321 0000
Q ss_pred ccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC------cEEEcCC-ceeeccEEEEecCCCC
Q 010421 300 LKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG------GLEFEDN-TKLEADVVILCTGYDG 371 (511)
Q Consensus 300 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~------~v~~~dG-~~~~~D~VI~aTG~~~ 371 (511)
+.+.+.+++.+|+++.+. +.+++.+ .|+++|| +++++|.||+|||++|
T Consensus 230 ------------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 230 ------------------------NTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp ------------------------HHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred ------------------------HHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 011123444467777764 7777542 3677899 7899999999999999
Q ss_pred cccc-cccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 372 KKKL-KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 372 ~~~~-~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
+..+ ++.. ++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 286 ~~~l~l~~~-----gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 286 HLGMGSENV-----GIKLNSHDQIIADEYQ-NTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CCCSSGGGG-----TCCBCTTSCBCCCTTC-BCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHSC
T ss_pred ccccChhhc-----CceECCCCCEeECCCC-ccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcCC
Confidence 8743 2211 1112334445454443 467899999998754 345678999999999988763
No 50
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.93 E-value=4.9e-26 Score=229.36 Aligned_cols=291 Identities=13% Similarity=0.151 Sum_probs=188.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cC--CCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCCh
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RH--HNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
|++.+||+|||||++|+++|..| .| .+|+|+|++. |..|....++. .+ ......
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------------~~-------~~~~~~ 58 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------------GF-------SKNKDA 58 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------------TT-------TTTCCH
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------------HH-------hCCCCH
Confidence 66678999999999999999999 55 5689999975 33333200000 00 111223
Q ss_pred HHHH-HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 77 TEIL-DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 77 ~~~~-~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.++. .++..+++++++ .++++++|..++.. .++|.+.++ ++.||+||+|||.
T Consensus 59 ~~~~~~~~~~~~~~~~v--~~~~~~~v~~i~~~------------------~~~v~~~~~------~~~~d~lviAtG~- 111 (384)
T 2v3a_A 59 DGLAMAEPGAMAEQLNA--RILTHTRVTGIDPG------------------HQRIWIGEE------EVRYRDLVLAWGA- 111 (384)
T ss_dssp HHHEEECHHHHHHHTTC--EEECSCCCCEEEGG------------------GTEEEETTE------EEECSEEEECCCE-
T ss_pred HHhhccCHHHHHHhCCc--EEEeCCEEEEEECC------------------CCEEEECCc------EEECCEEEEeCCC-
Confidence 4443 356667777887 77778889888762 135665321 6899999999994
Q ss_pred CCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 156 GDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 156 ~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.|..|++| |.+. ..++++.++.+.... ......+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+
T Consensus 112 --~p~~p~i~---g~~~--~~v~~~~~~~~~~~~-~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~-----Vtlv~~~~ 178 (384)
T 2v3a_A 112 --EPIRVPVE---GDAQ--DALYPINDLEDYARF-RQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQ-----LDVVAPCE 178 (384)
T ss_dssp --EECCCCCB---STTT--TCEEECSSHHHHHHH-HHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSS
T ss_pred --CcCCCCCC---CcCc--CCEEEECCHHHHHHH-HHhhccCCeEEEECCCHHHHHHHHHHHhCCCe-----EEEEecCc
Confidence 57788787 5432 235665554332100 01234589999999999999999999998754 99999976
Q ss_pred ceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccc
Q 010421 236 HWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYA 315 (511)
Q Consensus 236 ~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~ 315 (511)
. +++... + ...
T Consensus 179 ~-~~~~~~------~----~~~---------------------------------------------------------- 189 (384)
T 2v3a_A 179 Q-VMPGLL------H----PAA---------------------------------------------------------- 189 (384)
T ss_dssp S-SSTTTS------C----HHH----------------------------------------------------------
T ss_pred c-hhhccc------C----HHH----------------------------------------------------------
Confidence 4 222210 0 000
Q ss_pred cccccccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCC
Q 010421 316 SCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHP 390 (511)
Q Consensus 316 ~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~ 390 (511)
.+.+.+.+++.+|+++.+. +.+++.+ .|+++||+++++|.||+|||++++..+.+.++.. .+
T Consensus 190 -------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~-----~~- 256 (384)
T 2v3a_A 190 -------AKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLA-----VN- 256 (384)
T ss_dssp -------HHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCC-----BS-
T ss_pred -------HHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCC-----CC-
Confidence 0111233445567777764 7777532 3678899999999999999999987654322211 11
Q ss_pred CCcccceeeecCCCCCceEEEeecccc-----hhhhhHHHHHHHHHHHhcCC
Q 010421 391 SGLLPLYRGTIHPLIPNMAFVGYIESV-----SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 391 ~~~~~ly~~~~~~~~pnl~~iG~~~~~-----~~~~~~e~qa~~~a~~l~g~ 437 (511)
++ +.+..+ +.++.||+|++|..... ..+..+..||+.+|..+.|+
T Consensus 257 ~g-i~vd~~-~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 257 RG-IVVDRS-LRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp SS-EEECTT-CBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred CC-EEECCC-CCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 22 444443 33678999999977531 12456889999999999875
No 51
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.93 E-value=3.3e-26 Score=235.19 Aligned_cols=302 Identities=16% Similarity=0.135 Sum_probs=183.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc-----ccCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY-----EFTDFPWPNRDDPG 72 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 72 (511)
|++.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+..+...+ ....+.++.. ..
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~--~~ 77 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT--IN 77 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE--EE
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC--CC
Confidence 66678999999999999999999 89999999997 789998631 11111000000000 0011111000 00
Q ss_pred CCChHHHHHHHH-----------HHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 73 FPSYTEILDYLE-----------SYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 73 ~~~~~~~~~yl~-----------~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
.....++.++.+ ...++.++ .+..+ ++..++. ++|.+ ++.
T Consensus 78 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------~~v~~-~g~----- 128 (450)
T 1ges_A 78 KFNWETLIASRTAYIDRIHTSYENVLGKNNV--DVIKG-FARFVDA--------------------KTLEV-NGE----- 128 (450)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CCEEEET--------------------TEEEE-TTE-----
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEecC--------------------CEEEE-CCE-----
Confidence 112233333322 22344555 44444 3333332 14655 322
Q ss_pred EEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC
Q 010421 142 RYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ 221 (511)
Q Consensus 142 ~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 221 (511)
++.||+||+|||+ .|..|.+| |.+ .++++.++..+ ...+++|+|||+|.+|+|+|..|++.+.
T Consensus 129 ~~~~d~lviAtGs---~p~~p~i~---g~~----~~~~~~~~~~~-------~~~~~~vvViGgG~~g~e~A~~l~~~g~ 191 (450)
T 1ges_A 129 TITADHILIATGG---RPSHPDIP---GVE----YGIDSDGFFAL-------PALPERVAVVGAGYIGVELGGVINGLGA 191 (450)
T ss_dssp EEEEEEEEECCCE---EECCCCST---TGG----GSBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEeCEEEECCCC---CCCCCCCC---Ccc----ceecHHHhhhh-------hhcCCeEEEECCCHHHHHHHHHHHhcCC
Confidence 7899999999994 57888888 653 23455444332 1347899999999999999999998875
Q ss_pred CCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCccc
Q 010421 222 GPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLK 301 (511)
Q Consensus 222 ~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (511)
+ |+++.|.+. ++|..+ . ...
T Consensus 192 ~-----Vtlv~~~~~-~l~~~~-------~----~~~------------------------------------------- 211 (450)
T 1ges_A 192 K-----THLFEMFDA-PLPSFD-------P----MIS------------------------------------------- 211 (450)
T ss_dssp E-----EEEECSSSS-SSTTSC-------H----HHH-------------------------------------------
T ss_pred E-----EEEEEeCCc-hhhhhh-------H----HHH-------------------------------------------
Confidence 4 999999865 223221 0 000
Q ss_pred CCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCceeeccEEEEecCCCCcccc
Q 010421 302 YGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTKLEADVVILCTGYDGKKKL 375 (511)
Q Consensus 302 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~D~VI~aTG~~~~~~~ 375 (511)
+.+.+.+++.+|+++.+. +.+++.+ .|+++||+++++|.||+|||++++...
T Consensus 212 ----------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~ 269 (450)
T 1ges_A 212 ----------------------ETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDN 269 (450)
T ss_dssp ----------------------HHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTT
T ss_pred ----------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCC
Confidence 001123344456777664 6777542 367889999999999999999998752
Q ss_pred cccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 376 KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
+ ...-.++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 270 l---~~~~~gl~~~~~g~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 270 I---NLEAAGVKTNEKGYIVVDKYQ-NTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp S---CHHHHTCCBCTTSCBCCCTTS-BCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHTT
T ss_pred C---CchhcCceECCCCCEeECCCC-ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 1 000011112334445554443 467899999998764 345678999999999988764
No 52
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=5e-26 Score=235.60 Aligned_cols=310 Identities=16% Similarity=0.124 Sum_probs=189.7
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc----c-cCCCCCCCC-----C
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY----E-FTDFPWPNR-----D 69 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~----~-~~~~~~~~~-----~ 69 (511)
..+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+......+ . +..+.++.. +
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 468999999999999999999 899999999998999998641 11111000000000 0 000000000 0
Q ss_pred CCCCCChH----HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEe
Q 010421 70 DPGFPSYT----EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGF 145 (511)
Q Consensus 70 ~~~~~~~~----~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (511)
...+.... .+..++...+++.++ .+++++.+. ++ .+.|+|.+.++ ...++.|
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~------------------~~~~~v~~~~G---~~~~i~~ 140 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-VS------------------PSEISVDTIEG---ENTVVKG 140 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-EE------------------TTEEEECCSSS---CCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-ec------------------CCEEEEEeCCC---ceEEEEc
Confidence 00000111 122334555666777 677776553 32 23455543332 2237899
Q ss_pred CEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCC
Q 010421 146 EFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEG 225 (511)
Q Consensus 146 d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~ 225 (511)
|+||+|||. .|..|.++ |.+. ..++++.+...+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 141 d~lIiAtGs---~p~~p~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~~~g~~--- 202 (470)
T 1dxl_A 141 KHIIIATGS---DVKSLPGV---TIDE--KKIVSSTGALALS-------EIPKKLVVIGAGYIGLEMGSVWGRIGSE--- 202 (470)
T ss_dssp SEEEECCCE---EECCBTTB---CCCS--SSEECHHHHTTCS-------SCCSEEEESCCSHHHHHHHHHHHHHTCE---
T ss_pred CEEEECCCC---CCCCCCCC---CCCc--ccEEeHHHhhhhh-------hcCCeEEEECCCHHHHHHHHHHHHcCCc---
Confidence 999999995 56777777 5432 1366666554422 2578999999999999999999998764
Q ss_pred CcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCC
Q 010421 226 QPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLK 305 (511)
Q Consensus 226 ~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 305 (511)
|+++.|++. ++|... ..+ .
T Consensus 203 --Vtli~~~~~-~l~~~~-----------~~~----------------------------~------------------- 221 (470)
T 1dxl_A 203 --VTVVEFASE-IVPTMD-----------AEI----------------------------R------------------- 221 (470)
T ss_dssp --EEEECSSSS-SSTTSC-----------HHH----------------------------H-------------------
T ss_pred --EEEEEcCCc-cccccc-----------HHH----------------------------H-------------------
Confidence 999999875 333221 000 0
Q ss_pred CCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEc---CC--ceeeccEEEEecCCCCcccc
Q 010421 306 PDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFE---DN--TKLEADVVILCTGYDGKKKL 375 (511)
Q Consensus 306 p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~---dG--~~~~~D~VI~aTG~~~~~~~ 375 (511)
+.+.+.+++.+|+++.+. +.+++.++ |.++ || +++++|.||+|||++++..+
T Consensus 222 ------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 222 ------------------KQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp ------------------HHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTT
T ss_pred ------------------HHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCC
Confidence 001123445567777664 77776543 3444 55 56999999999999998765
Q ss_pred cccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 376 KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
+. + .-.++..+..+.+.+..++ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 284 l~-~--~~~gl~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 284 LN-L--DKIGVETDKLGRILVNERF-STNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp SC-C--TTTTCCBCSSSCBCCCTTC-BCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred CC-c--hhcCCccCCCCCEeECcCC-ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 21 0 1011111233445454443 3678999999987653 34568999999999999875
No 53
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.93 E-value=5.6e-26 Score=234.57 Aligned_cols=303 Identities=13% Similarity=0.089 Sum_probs=186.3
Q ss_pred CCC-CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccC----CCCccccCCCCCCCCCCCC
Q 010421 1 MAN-YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQS----HRSDYEFTDFPWPNRDDPG 72 (511)
Q Consensus 1 m~~-~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 72 (511)
|++ .+||+|||||++|+++|..| .|++|+|+|+ +.+||+|... ..|...+.. +.....+..+.++.. ..
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~--~~ 77 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVG--ES 77 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEEC--CC
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccC--CC
Confidence 543 58999999999999999999 8999999999 7899988641 111110000 000001111111100 01
Q ss_pred CCChHHH-----------HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 73 FPSYTEI-----------LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 73 ~~~~~~~-----------~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
.....++ ..++....++.++ .+..+ ++..++ ..++.+.+. + .
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--------------------~~~v~~~~~--~--~ 130 (463)
T 4dna_A 78 RFDWAKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELAG--------------------PNTVKLLAS--G--K 130 (463)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEESS--------------------SSEEEETTT--T--E
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEee--------------------CCEEEEecC--C--e
Confidence 1122222 2333444444555 34433 333221 124555211 2 2
Q ss_pred EEEeCEEEEeecccCCCCC-CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhc
Q 010421 142 RYGFEFLVVCTGKYGDVPI-IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESN 220 (511)
Q Consensus 142 ~~~~d~vVlAtG~~~~~p~-~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~ 220 (511)
.+.||+||+|||. .|. .|.+| |.+. ++++.++..+ ...+++|+|||+|.+|+|+|..+++.+
T Consensus 131 ~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~~~g 193 (463)
T 4dna_A 131 TVTAERIVIAVGG---HPSPHDALP---GHEL----CITSNEAFDL-------PALPESILIAGGGYIAVEFANIFHGLG 193 (463)
T ss_dssp EEEEEEEEECCCE---EECCCTTST---TGGG----CBCHHHHTTC-------SSCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEeCEEEEecCC---CcccCCCCC---Cccc----cccHHHHhhh-------hcCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 7899999999994 577 88888 6542 3444444432 235789999999999999999999887
Q ss_pred CCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcc
Q 010421 221 QGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLL 300 (511)
Q Consensus 221 ~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (511)
.+ |+++.|.+..+ |..+ ...
T Consensus 194 ~~-----Vt~v~~~~~~l-~~~~-----------~~~------------------------------------------- 213 (463)
T 4dna_A 194 VK-----TTLIYRGKEIL-SRFD-----------QDM------------------------------------------- 213 (463)
T ss_dssp CE-----EEEECSSSSSS-TTSC-----------HHH-------------------------------------------
T ss_pred Ce-----EEEEEcCCccc-cccC-----------HHH-------------------------------------------
Confidence 54 99999987532 3221 000
Q ss_pred cCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEE-EcCCceeeccEEEEecCCCCcc
Q 010421 301 KYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLE-FEDNTKLEADVVILCTGYDGKK 373 (511)
Q Consensus 301 ~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~-~~dG~~~~~D~VI~aTG~~~~~ 373 (511)
.+.+.+.+++.+|+++.+. +.+++.+ .|+ ++||+ +++|.||+|||++++.
T Consensus 214 ----------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~ 270 (463)
T 4dna_A 214 ----------------------RRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNT 270 (463)
T ss_dssp ----------------------HHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESC
T ss_pred ----------------------HHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCC
Confidence 0111234555677888764 7777643 366 77888 9999999999999987
Q ss_pred cccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 374 KLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
.++. ..-.++..++++.+.+..++. ++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 271 ~~l~---l~~~g~~~~~~G~i~vd~~~~-t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 271 NGLG---LEAAGVRTNELGAIIVDAFSR-TSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp TTSS---TGGGTCCBCTTSCBCCCTTCB-CSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCC---ccccCceECCCCCEeECcCCC-CCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcCC
Confidence 6421 111112223444455554433 78899999998765 334578999999999998764
No 54
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=6.8e-26 Score=233.47 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=186.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+..... ...+..+.++.. ......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE--NVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC--SCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCccCH
Confidence 47999999999999999999 89999999997 899988531 111110000000 000000111000 000111
Q ss_pred H-----------HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEe
Q 010421 77 T-----------EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGF 145 (511)
Q Consensus 77 ~-----------~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (511)
. .+.+++...+++.++ .++.++.+. ++ .+.+.|...++ . .++.|
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-id------------------~~~v~V~~~~G---~-~~i~~ 134 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAYF-VD------------------ANTVRVVNGDS---A-QTYTF 134 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEEE-EE------------------TTEEEEEETTE---E-EEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEE-cc------------------CCeEEEEeCCC---c-EEEEe
Confidence 1 133445556666777 677766543 33 33455554332 1 27899
Q ss_pred CEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCC
Q 010421 146 EFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEG 225 (511)
Q Consensus 146 d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~ 225 (511)
|+||+|||. .|..|.++ |.+. .++++.+...+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 135 d~lViATGs---~p~~~~~~---g~~~---~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~~~g~~--- 195 (455)
T 1ebd_A 135 KNAIIATGS---RPIELPNF---KFSN---RILDSTGALNLG-------EVPKSLVVIGGGYIGIELGTAYANFGTK--- 195 (455)
T ss_dssp SEEEECCCE---EECCBTTB---CCCS---SEECHHHHHTCS-------SCCSEEEEECCSHHHHHHHHHHHHTTCE---
T ss_pred CEEEEecCC---CCCCCCCC---Cccc---eEecHHHHhccc-------cCCCeEEEECCCHHHHHHHHHHHHcCCc---
Confidence 999999995 57777777 5432 256665543321 2578999999999999999999988754
Q ss_pred CcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCC
Q 010421 226 QPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLK 305 (511)
Q Consensus 226 ~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 305 (511)
|+++.|.+. ++|... ....
T Consensus 196 --Vtlv~~~~~-~l~~~~-----------~~~~----------------------------------------------- 214 (455)
T 1ebd_A 196 --VTILEGAGE-ILSGFE-----------KQMA----------------------------------------------- 214 (455)
T ss_dssp --EEEEESSSS-SSTTSC-----------HHHH-----------------------------------------------
T ss_pred --EEEEEcCCc-cccccC-----------HHHH-----------------------------------------------
Confidence 999999875 333221 0000
Q ss_pred CCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--cE--EEc---CCceeeccEEEEecCCCCcccccc
Q 010421 306 PDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--GL--EFE---DNTKLEADVVILCTGYDGKKKLKA 377 (511)
Q Consensus 306 p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~v--~~~---dG~~~~~D~VI~aTG~~~~~~~~~ 377 (511)
+.+.+.+++.+|+++.+. +.+++.+ ++ .++ +++++++|.||+|||++++..++.
T Consensus 215 ------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~ 276 (455)
T 1ebd_A 215 ------------------AIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELG 276 (455)
T ss_dssp ------------------HHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSS
T ss_pred ------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCC
Confidence 001123444567777764 6677532 33 443 456799999999999999876421
Q ss_pred cCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 378 FLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
+ .-.++..++++.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 277 -~--~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (455)
T 1ebd_A 277 -L--EQIGIKMTNRGLIEVDQQC-RTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGH 333 (455)
T ss_dssp -T--TTTTCCBCTTSCBCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTSC
T ss_pred -h--hhcCCccCCCCCEeeCCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 0 1011111233445554443 3678999999987653 34568999999999999875
No 55
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.93 E-value=1.1e-25 Score=234.62 Aligned_cols=314 Identities=14% Similarity=0.106 Sum_probs=191.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--c---CCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCCCCCCCCCCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R---HHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPNRDDPGF 73 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~---g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 73 (511)
.+||+|||||++|+++|..| . |++|+|||+++ +||+|... ..|...+..... ...+..+.++.......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999 5 99999999987 99987641 112111100000 00112222210000111
Q ss_pred CChHHHH-----------HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeE
Q 010421 74 PSYTEIL-----------DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQR 142 (511)
Q Consensus 74 ~~~~~~~-----------~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 142 (511)
.....+. .++..+.+++++ .++.++ +..++...+. .++. +.+...+ ++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~~~------------~~~~--~~V~~~~-g~~~~ 142 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTPGL------------ARHR--IKATAAD-GSTSE 142 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSSCC------------SSEE--EEEECTT-SCEEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcccC------------CCCE--EEEEeCC-CcEEE
Confidence 2233332 334556667777 666664 5544331000 0133 3343322 22236
Q ss_pred EEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCC
Q 010421 143 YGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQG 222 (511)
Q Consensus 143 ~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 222 (511)
+.||+||+|||. .|..|.++ |.+.. .++++.+...+. ..+++|+|||+|.+|+|+|..+++.+.+
T Consensus 143 ~~~d~lviATGs---~p~~p~i~---g~~~~--~v~~~~~~~~~~-------~~~~~vvViGgG~ig~E~A~~l~~~g~~ 207 (499)
T 1xdi_A 143 HEADVVLVATGA---SPRILPSA---QPDGE--RILTWRQLYDLD-------ALPDHLIVVGSGVTGAEFVDAYTELGVP 207 (499)
T ss_dssp EEESEEEECCCE---EECCCGGG---CCCSS--SEEEGGGGGGCS-------SCCSSEEEESCSHHHHHHHHHHHHTTCC
T ss_pred EEeCEEEEcCCC---CCCCCCCC---CCCcC--cEEehhHhhhhh-------ccCCeEEEECCCHHHHHHHHHHHHcCCe
Confidence 899999999994 57778777 54432 266666554422 3568999999999999999999988765
Q ss_pred CCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccC
Q 010421 223 PEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKY 302 (511)
Q Consensus 223 ~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (511)
|+++.|.+. ++|..+ ....
T Consensus 208 -----Vtlv~~~~~-~l~~~d-----------~~~~-------------------------------------------- 226 (499)
T 1xdi_A 208 -----VTVVASQDH-VLPYED-----------ADAA-------------------------------------------- 226 (499)
T ss_dssp -----EEEECSSSS-SSCCSS-----------HHHH--------------------------------------------
T ss_pred -----EEEEEcCCc-cccccC-----------HHHH--------------------------------------------
Confidence 999999875 333321 0000
Q ss_pred CCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEcCCceeeccEEEEecCCCCcccccc
Q 010421 303 GLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFEDNTKLEADVVILCTGYDGKKKLKA 377 (511)
Q Consensus 303 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~aTG~~~~~~~~~ 377 (511)
..+.+.+++.+|+++.+. |.+++.++ |.+.||+++++|.||+|+|++++..++.
T Consensus 227 ---------------------~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~ 285 (499)
T 1xdi_A 227 ---------------------LVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLG 285 (499)
T ss_dssp ---------------------HHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSC
T ss_pred ---------------------HHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCC
Confidence 011123445567777764 77776443 4556888899999999999999976521
Q ss_pred cCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 378 FLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
+ .-.++..+..+.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 286 -l--~~~gl~~~~~G~i~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 286 -L--ERVGIQLGRGNYLTVDRVS-RTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp -T--TTTTCCCBTTTBCCCCSSS-BCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTTC
T ss_pred -c--hhcCceECCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 0 1011111233445454443 3578999999987653 33568999999999999885
No 56
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.93 E-value=7.8e-26 Score=234.27 Aligned_cols=308 Identities=16% Similarity=0.133 Sum_probs=189.5
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc------ccCCCCCCCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY------EFTDFPWPNRDDPGF 73 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 73 (511)
+.+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+......+ .+..+.++.. ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~--~~~ 82 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS--EVR 82 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES--CEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC--CCc
Confidence 357999999999999999999 899999999998999998641 11211110000000 1111111100 001
Q ss_pred CChHHHHHH-----------HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeE
Q 010421 74 PSYTEILDY-----------LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQR 142 (511)
Q Consensus 74 ~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 142 (511)
....++..+ +....++.++ .++.++. ..++ .+.++|.+.++ + ..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~~------------------~~~~~v~~~~g--g-~~~ 138 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGYG-KITG------------------KNQVTATKADG--G-TQV 138 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEE-EEEE------------------TTEEEEECTTS--C-EEE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEec------------------CCEEEEEecCC--C-cEE
Confidence 122232222 2445556666 6666643 3332 23445543321 1 136
Q ss_pred EEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCC
Q 010421 143 YGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQG 222 (511)
Q Consensus 143 ~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 222 (511)
+.||+||+|||+ .|..|.++ |.+.. .++++.++..+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 139 ~~~d~lViAtGs---~p~~p~i~---g~~~~--~v~t~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g~~ 203 (474)
T 1zmd_A 139 IDTKNILIATGS---EVTPFPGI---TIDED--TIVSSTGALSLK-------KVPEKMVVIGAGVIGVELGSVWQRLGAD 203 (474)
T ss_dssp EEEEEEEECCCE---EECCCTTC---CCCSS--SEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred EEeCEEEECCCC---CCCCCCCC---CCCcC--cEEcHHHHhhcc-------ccCceEEEECCCHHHHHHHHHHHHcCCE
Confidence 899999999995 57777777 54321 367776665432 2468999999999999999999988754
Q ss_pred CCCCcEEEEEecCceeec-CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCccc
Q 010421 223 PEGQPCTMIVRTTHWTVP-HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLK 301 (511)
Q Consensus 223 ~~~~~Vtl~~R~~~~~~p-~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (511)
|+++.|++. ++| ..+ . ...
T Consensus 204 -----Vtlv~~~~~-~l~~~~~-------~----~~~------------------------------------------- 223 (474)
T 1zmd_A 204 -----VTAVEFLGH-VGGVGID-------M----EIS------------------------------------------- 223 (474)
T ss_dssp -----EEEECSSSS-SSCSSCC-------H----HHH-------------------------------------------
T ss_pred -----EEEEeccCc-cCCcccC-------H----HHH-------------------------------------------
Confidence 999999875 333 211 0 000
Q ss_pred CCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--c-EEE-------cCCceeeccEEEEecCCC
Q 010421 302 YGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--G-LEF-------EDNTKLEADVVILCTGYD 370 (511)
Q Consensus 302 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~-v~~-------~dG~~~~~D~VI~aTG~~ 370 (511)
+.+.+.+++.+|+++.+. |.+++.+ + +.+ .+|+++++|.||+|||++
T Consensus 224 ----------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 224 ----------------------KNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp ----------------------HHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred ----------------------HHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 011123445567777764 6677543 2 433 356679999999999999
Q ss_pred CcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 371 GKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
++..++. ..-.++..++++.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 282 p~~~~l~---l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 282 PFTKNLG---LEELGIELDPRGRIPVNTRF-QTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp ECCTTSS---HHHHTCCCCTTSCCCCCTTC-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred cCCCcCC---chhcCCccCCCCCEEECcCC-ccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcCC
Confidence 9876421 00011111233445554443 3678999999987653 34578999999999999875
No 57
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.93 E-value=7.7e-26 Score=235.50 Aligned_cols=300 Identities=14% Similarity=0.152 Sum_probs=178.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccC----CCCccccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQS----HRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+.. .........+.+... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~---~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK---FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC---CccCH
Confidence 48999999999999999999 89999999997 589998641 112110000 000000111111110 01122
Q ss_pred HHHH-----------HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC--------CC
Q 010421 77 TEIL-----------DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH--------NS 137 (511)
Q Consensus 77 ~~~~-----------~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~ 137 (511)
.++. .++....++.++ .+..++ +..++ . ++|++.+. .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~id------------------~--~~v~v~~~~~~~~~~~~~ 134 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGT-ASFLS------------------E--NRILIKGTKDNNNKDNGP 134 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CCCC----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEee------------------C--CEEEEEeccccccccccC
Confidence 2222 223334455555 454442 22221 1 12333320 00
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHH
Q 010421 138 NSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECA 217 (511)
Q Consensus 138 ~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~ 217 (511)
+...++.||+||+||| ..|..|++| |.+ .++++.++..+. . +++|+|||+|.+|+|+|..|+
T Consensus 135 ~~~~~~~~d~lViAtG---s~p~~p~i~---G~~----~~~~~~~~~~~~-------~-~~~vvViGgG~ig~E~A~~l~ 196 (500)
T 1onf_A 135 LNEEILEGRNILIAVG---NKPVFPPVK---GIE----NTISSDEFFNIK-------E-SKKIGIVGSGYIAVELINVIK 196 (500)
T ss_dssp ------CBSSEEECCC---CCBCCCSCT---TGG----GCEEHHHHTTCC-------C-CSEEEEECCSHHHHHHHHHHH
T ss_pred CCceEEEeCEEEECCC---CCCCCCCCC---CCC----cccCHHHHhccC-------C-CCeEEEECChHHHHHHHHHHH
Confidence 0112689999999999 468888888 653 356776665432 2 789999999999999999999
Q ss_pred HhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC
Q 010421 218 ESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKL 297 (511)
Q Consensus 218 ~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (511)
+.+.+ ||++.|.+. ++|..+ ...
T Consensus 197 ~~g~~-----Vtlv~~~~~-~l~~~d-----------~~~---------------------------------------- 219 (500)
T 1onf_A 197 RLGID-----SYIFARGNR-ILRKFD-----------ESV---------------------------------------- 219 (500)
T ss_dssp TTTCE-----EEEECSSSS-SCTTSC-----------HHH----------------------------------------
T ss_pred HcCCe-----EEEEecCCc-cCcccc-----------hhh----------------------------------------
Confidence 88754 999999875 334322 000
Q ss_pred CcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCce-eeccEEEEecCCC
Q 010421 298 PLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTK-LEADVVILCTGYD 370 (511)
Q Consensus 298 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~-~~~D~VI~aTG~~ 370 (511)
.+.+.+.+++.+|+++.+. +.+++++ .|+++||++ +++|.||+|||++
T Consensus 220 -------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 220 -------------------------INVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp -------------------------HHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred -------------------------HHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 0011134555667887775 7777642 367789988 9999999999999
Q ss_pred Cccc-c-cccCCCcccccccCCCCcccceeeecCCCCCceEEEeecc---------------------------------
Q 010421 371 GKKK-L-KAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIE--------------------------------- 415 (511)
Q Consensus 371 ~~~~-~-~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~--------------------------------- 415 (511)
++.. + .+..+ +.. ..+.+.+...+ .++.||+|++|...
T Consensus 275 p~~~~l~~~~~g-----~~~-~~G~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (500)
T 1onf_A 275 PDTENLKLEKLN-----VET-NNNYIVVDENQ-RTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDI 347 (500)
T ss_dssp CTTTTSSCTTTT-----CCB-SSSCEEECTTC-BCSSSSEEECSTTEEEC------------------------------
T ss_pred cCCCCCCchhcC-----ccc-cCCEEEECCCc-ccCCCCEEEEecccccccccccccccccccccccccccccccccccc
Confidence 9874 2 12111 111 23334444433 36789999999655
Q ss_pred -c-chhhhhHHHHHHHHHHHhcCC
Q 010421 416 -S-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 416 -~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
. +...+.|..|++.+|..+.|.
T Consensus 348 ~~~~~~~~~A~~~g~~aa~~i~g~ 371 (500)
T 1onf_A 348 FYNVQLTPVAINAGRLLADRLFLK 371 (500)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCcccchhHHHHHHHHHHHHHhCC
Confidence 1 223568999999999998763
No 58
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.93 E-value=4.1e-25 Score=228.43 Aligned_cols=309 Identities=17% Similarity=0.140 Sum_probs=183.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCC-CccccCCCCCCCCC--CCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHR-SDYEFTDFPWPNRD--DPGFP 74 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~ 74 (511)
|+..+||+|||||++|+++|.+| .|++|+|+|++ .+||+|... .+|...+.... ..+.....|+.... .....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 77789999999999999999999 89999999997 899998741 11111000000 00001111111000 01111
Q ss_pred ChHHHH-------HHHH-----HHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 75 SYTEIL-------DYLE-----SYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 75 ~~~~~~-------~yl~-----~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
...++. ++++ ...++. ++ .+..+ ++..++ .+.++|.+.++ +..
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~g-~~~~~~------------------~~~~~v~~~~g---~~~ 135 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAI--TVVHG-EARFKD------------------DQSLTVRLNEG---GER 135 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEEE-EEEEEE------------------TTEEEEEETTS---SEE
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEEE-EEEEcc------------------CCEEEEEeCCC---ceE
Confidence 222222 2332 122223 33 33333 454444 22344544332 223
Q ss_pred EEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC
Q 010421 142 RYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ 221 (511)
Q Consensus 142 ~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 221 (511)
++.||+||+|||+ .|..|.+| |.+.. .++++.+...+ ...+++|+|||+|.+|+|+|..+++.+.
T Consensus 136 ~~~~d~lviAtGs---~p~~p~i~---G~~~~--~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~~g~ 200 (467)
T 1zk7_A 136 VVMFDRCLVATGA---SPAVPPIP---GLKES--PYWTSTEALAS-------DTIPERLAVIGSSVVALELAQAFARLGS 200 (467)
T ss_dssp EEECSEEEECCCE---EECCCCCT---TTTTS--CCBCHHHHHHC-------SSCCSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred EEEeCEEEEeCCC---CCCCCCCC---CCCcC--ceecHHHHhcc-------cccCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 7899999999994 67888888 65432 24455444332 2357999999999999999999998876
Q ss_pred CCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCccc
Q 010421 222 GPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLK 301 (511)
Q Consensus 222 ~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (511)
+ |+++.|++. ++| .+ . ...
T Consensus 201 ~-----Vtlv~~~~~-~l~-~~-------~----~~~------------------------------------------- 219 (467)
T 1zk7_A 201 K-----VTVLARNTL-FFR-ED-------P----AIG------------------------------------------- 219 (467)
T ss_dssp E-----EEEECSSCT-TTT-SC-------H----HHH-------------------------------------------
T ss_pred E-----EEEEEECCc-cCC-CC-------H----HHH-------------------------------------------
Confidence 4 999999874 223 21 0 000
Q ss_pred CCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEcCCceeeccEEEEecCCCCccccc
Q 010421 302 YGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFEDNTKLEADVVILCTGYDGKKKLK 376 (511)
Q Consensus 302 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~dG~~~~~D~VI~aTG~~~~~~~~ 376 (511)
+.+.+.+++.+|+++.+. +.+++.++ |.++ +.++++|.||+|||++++..++
T Consensus 220 ----------------------~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~~l 276 (467)
T 1zk7_A 220 ----------------------EAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTRSL 276 (467)
T ss_dssp ----------------------HHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCTTS
T ss_pred ----------------------HHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCCcC
Confidence 011123444567777663 66665322 3444 5679999999999999986532
Q ss_pred ccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 377 AFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
. ..-.++..+..+.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.+.
T Consensus 277 ~---l~~~gl~~~~~G~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 277 A---LDAAGVTVNAQGAIVIDQGM-RTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp C---GGGGTCCBCTTSCBCCCTTC-BCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTTC
T ss_pred C---chhcCCcCCCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 1 00011111233445444433 3578999999987653 34678999999999988764
No 59
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.93 E-value=4.7e-26 Score=235.28 Aligned_cols=303 Identities=13% Similarity=0.102 Sum_probs=186.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCc----c-ccCCCCCCCCCCCCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSD----Y-EFTDFPWPNRDDPGFPS 75 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~ 75 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+...... . .+..+.++ . .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~--~~~~~ 78 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G--EVTFD 78 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E--CCEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C--CCccC
Confidence 57999999999999999999 89999999997 789887531 1121111000000 0 01111111 0 00011
Q ss_pred hH-----------HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEE
Q 010421 76 YT-----------EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYG 144 (511)
Q Consensus 76 ~~-----------~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 144 (511)
.. .+.+++...+++.++ .+++++.+. + + .+.++|...++ +..++.
T Consensus 79 ~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~-i----d--------------~~~v~V~~~~G---~~~~~~ 134 (464)
T 2a8x_A 79 YGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF-A----D--------------ANTLLVDLNDG---GTESVT 134 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE-S----S--------------SSEEEEEETTS---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-e----c--------------CCeEEEEeCCC---ceEEEE
Confidence 11 223344556666777 677666542 1 1 33455544332 223789
Q ss_pred eCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCC
Q 010421 145 FEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPE 224 (511)
Q Consensus 145 ~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~ 224 (511)
||+||+|||+ .|..|.++ |.+. .++++.+...+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 135 ~d~lViAtG~---~~~~~~~~---g~~~---~~~~~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g~~-- 196 (464)
T 2a8x_A 135 FDNAIIATGS---STRLVPGT---SLSA---NVVTYEEQILSR-------ELPKSIIIAGAGAIGMEFGYVLKNYGVD-- 196 (464)
T ss_dssp EEEEEECCCE---EECCCTTC---CCBT---TEECHHHHHTCS-------SCCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred cCEEEECCCC---CCCCCCCC---CCCc---eEEecHHHhhcc-------ccCCeEEEECCcHHHHHHHHHHHHcCCe--
Confidence 9999999995 46777776 5432 256655543321 2578999999999999999999988754
Q ss_pred CCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCC
Q 010421 225 GQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGL 304 (511)
Q Consensus 225 ~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (511)
||++.|.+. ++|..+ .... .
T Consensus 197 ---Vtlv~~~~~-~l~~~~-----------~~~~----------------------------~----------------- 216 (464)
T 2a8x_A 197 ---VTIVEFLPR-ALPNED-----------ADVS----------------------------K----------------- 216 (464)
T ss_dssp ---EEEECSSSS-SSTTSC-----------HHHH----------------------------H-----------------
T ss_pred ---EEEEEcCCc-cccccC-----------HHHH----------------------------H-----------------
Confidence 999999875 333321 0000 0
Q ss_pred CCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCc----EEEc-CC--ceeeccEEEEecCCCCccccc
Q 010421 305 KPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG----LEFE-DN--TKLEADVVILCTGYDGKKKLK 376 (511)
Q Consensus 305 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~----v~~~-dG--~~~~~D~VI~aTG~~~~~~~~ 376 (511)
.+.+.+++.+|+++.+. +.++++++ +.++ || +++++|.||+|||++|+..++
T Consensus 217 --------------------~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l 276 (464)
T 2a8x_A 217 --------------------EIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGY 276 (464)
T ss_dssp --------------------HHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSS
T ss_pred --------------------HHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCC
Confidence 01123344456777764 67776432 3444 67 569999999999999987642
Q ss_pred ccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcC
Q 010421 377 AFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g 436 (511)
. ..-.++..++++.+.+..++ .++.||+|++|..... ...+.+..|++.+|..+.|
T Consensus 277 ~---~~~~gl~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 277 G---LDKAGVALTDRKAIGVDDYM-RTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp C---HHHHTCCBCTTSSBCCCTTS-BCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred C---chhcCCccCCCCCEeECcCC-ccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 1 01011111333445555443 3678999999987653 3457899999999999987
No 60
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.93 E-value=8.4e-26 Score=234.47 Aligned_cols=300 Identities=14% Similarity=0.103 Sum_probs=184.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccC----CCCccccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQS----HRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|+ +.+||+|... .+|...+.. +.....+..+.++.. ......
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYA--DPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCC--CCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 47999999999999999999 8999999999 7899987641 122111100 000011112222111 011122
Q ss_pred HH-----------HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEE-eCCCCceeEEE
Q 010421 77 TE-----------ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQ-THNSNSIQRYG 144 (511)
Q Consensus 77 ~~-----------~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~ 144 (511)
.. +..++....++.++ .+..+ ++..++. +++.+. ++. .+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------~~v~v~~~~~-----~~~ 154 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNV--HIYES-RAVFVDE--------------------HTLELSVTGE-----RIS 154 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEET--------------------TEEEETTTCC-----EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEeeC--------------------CEEEEecCCe-----EEE
Confidence 22 22333444445555 34433 4444432 145554 222 789
Q ss_pred eCEEEEeecccCCCCC-CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCC
Q 010421 145 FEFLVVCTGKYGDVPI-IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGP 223 (511)
Q Consensus 145 ~d~vVlAtG~~~~~p~-~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~ 223 (511)
+|+||+|||. .|. .|.+| |.+. ++++.++..+ ...+++|+|||+|.+|+|+|..+++.+.+
T Consensus 155 ~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~~~g~~- 216 (484)
T 3o0h_A 155 AEKILIATGA---KIVSNSAIK---GSDL----CLTSNEIFDL-------EKLPKSIVIVGGGYIGVEFANIFHGLGVK- 216 (484)
T ss_dssp EEEEEECCCE---EECCC--CB---TGGG----SBCTTTGGGC-------SSCCSEEEEECCSHHHHHHHHHHHHTTCE-
T ss_pred eCEEEEccCC---CcccCCCCC---Cccc----cccHHHHHhH-------HhcCCcEEEECcCHHHHHHHHHHHHcCCe-
Confidence 9999999995 567 77777 6542 3444444332 24578999999999999999999988754
Q ss_pred CCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCC
Q 010421 224 EGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYG 303 (511)
Q Consensus 224 ~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (511)
|+++.|.+.. +|... ...
T Consensus 217 ----Vtli~~~~~~-l~~~~-----------~~~---------------------------------------------- 234 (484)
T 3o0h_A 217 ----TTLLHRGDLI-LRNFD-----------YDL---------------------------------------------- 234 (484)
T ss_dssp ----EEEECSSSSS-STTSC-----------HHH----------------------------------------------
T ss_pred ----EEEEECCCcc-ccccC-----------HHH----------------------------------------------
Confidence 9999998752 22221 000
Q ss_pred CCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEcCCceeeccEEEEecCCCCccccccc
Q 010421 304 LKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFEDNTKLEADVVILCTGYDGKKKLKAF 378 (511)
Q Consensus 304 l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~ 378 (511)
.+.+.+.+++.+|+++.+. |.+++.+ .|+++||+++++|.||+|||++++..++.
T Consensus 235 -------------------~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~- 294 (484)
T 3o0h_A 235 -------------------RQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLG- 294 (484)
T ss_dssp -------------------HHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCC-
T ss_pred -------------------HHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCC-
Confidence 0011123444567777754 7777654 37788998999999999999999876421
Q ss_pred CCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 379 LPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 379 ~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
....++..++.+.+.+...+ .++.||||++|.... +...+.+..|++.+|..+.|.
T Consensus 295 --l~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 295 --LERAGVKVNEFGAVVVDEKM-TTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp --HHHHTCCBCTTSCBCCCTTS-BCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred --hhhcCceECCCCCEeECCCC-CCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 01111212333444444433 377899999998765 344568999999999998764
No 61
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.93 E-value=4.4e-26 Score=232.85 Aligned_cols=295 Identities=14% Similarity=0.107 Sum_probs=183.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCCh
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
|++.+||+|||||++|+++|..| .|. +|+|+|+++.++ |... ..++...... ...
T Consensus 1 M~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~l~~~~~~~~------------~~~ 59 (431)
T 1q1r_A 1 MNANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLP--PLSKAYLAGK------------ATA 59 (431)
T ss_dssp -CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSG--GGGTTTTTTC------------SCS
T ss_pred CCCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCC--CCcHHHhCCC------------CCh
Confidence 66779999999999999999999 676 799999976542 2111 0011000000 000
Q ss_pred HHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 77 TEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+++.....++.++.++ .++++++|+.++.. + .+|.+.++. ++.||+||+|||.
T Consensus 60 ~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~~----------------~--~~v~~~~g~-----~~~~d~lviAtG~-- 112 (431)
T 1q1r_A 60 ESLYLRTPDAYAAQNI--QLLGGTQVTAINRD----------------R--QQVILSDGR-----ALDYDRLVLATGG-- 112 (431)
T ss_dssp GGGBSSCHHHHHHTTE--EEECSCCEEEEETT----------------T--TEEEETTSC-----EEECSEEEECCCE--
T ss_pred HHhcccCHHHHHhCCC--EEEeCCEEEEEECC----------------C--CEEEECCCC-----EEECCEEEEcCCC--
Confidence 1110011233455677 78888999999862 1 257765543 7899999999995
Q ss_pred CCCCCCCCCCCCCCCcccc-e-EEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 157 DVPIIPAFPNNKGPEVFEG-Q-VLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 157 ~~p~~p~~~~~~g~~~~~g-~-~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
.|+.|.+| |.+ ..+ . +.+.....+.. ........+++|+|||+|.+|+|+|..|++.+.+ |+++.|.
T Consensus 113 -~p~~~~i~---G~~-~~~~~~v~~~~~~~d~~-~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~-----Vtlv~~~ 181 (431)
T 1q1r_A 113 -RPRPLPVA---SGA-VGKANNFRYLRTLEDAE-CIRRQLIADNRLVVIGGGYIGLEVAATAIKANMH-----VTLLDTA 181 (431)
T ss_dssp -EECCCGGG---TTH-HHHSTTEEESSSHHHHH-HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSS
T ss_pred -CccCCCCC---Ccc-cCCCceEEEECCHHHHH-HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE-----EEEEEeC
Confidence 57788888 654 222 1 33322221110 0001224689999999999999999999988754 9999987
Q ss_pred CceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccc
Q 010421 235 THWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDY 314 (511)
Q Consensus 235 ~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 314 (511)
+.. +|+.. + ..+.
T Consensus 182 ~~~-l~~~~------~----~~~~-------------------------------------------------------- 194 (431)
T 1q1r_A 182 ARV-LERVT------A----PPVS-------------------------------------------------------- 194 (431)
T ss_dssp SST-TTTTS------C----HHHH--------------------------------------------------------
T ss_pred Ccc-ccchh------h----HHHH--------------------------------------------------------
Confidence 642 22110 0 0000
Q ss_pred ccccccccCCchhhhhccCeEEEEeCc-eeEEeC---C----cEEEcCCceeeccEEEEecCCCCcccccccCCCccccc
Q 010421 315 ASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK---G----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSL 386 (511)
Q Consensus 315 ~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~---~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~ 386 (511)
+.+.+.+++.+|+++.+. +.+++. + +|+++||+++++|.||+|||++++..+.+..+...
T Consensus 195 ---------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~--- 262 (431)
T 1q1r_A 195 ---------AFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQV--- 262 (431)
T ss_dssp ---------HHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCB---
T ss_pred ---------HHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCC---
Confidence 001123344456777664 677754 2 37788999999999999999999876543222211
Q ss_pred ccCCCCcccceeeecCCCCCceEEEeecccch-----------hhhhHHHHHHHHHHHhcCCC
Q 010421 387 LEHPSGLLPLYRGTIHPLIPNMAFVGYIESVS-----------NLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 387 ~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~-----------~~~~~e~qa~~~a~~l~g~~ 438 (511)
+ +++.+...+ .++.||+|++|...... .+..+..||+.+|..+.|+.
T Consensus 263 --~--~gi~Vd~~~-~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~~ 320 (431)
T 1q1r_A 263 --D--NGIVINEHM-QTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCGKV 320 (431)
T ss_dssp --S--SSEECCTTS-BCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred --C--CCEEECCCc-ccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcCCC
Confidence 1 123333332 35789999999765421 34679999999999998753
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.93 E-value=6.5e-26 Score=235.16 Aligned_cols=308 Identities=16% Similarity=0.139 Sum_probs=187.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc-----ccCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY-----EFTDFPWPNRDDPG 72 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 72 (511)
|+..+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+......+ .+..+.++.. ...
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~-~~~ 80 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN-GDI 80 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC-SCE
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCC
Confidence 44568999999999999999999 899999999999999988641 11111000000000 0010111000 000
Q ss_pred CCChHHHHHH-----------HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCcee
Q 010421 73 FPSYTEILDY-----------LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQ 141 (511)
Q Consensus 73 ~~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 141 (511)
.....++..+ +...+++.++ .+++++.+.. + .+.++|.+.++. ..
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~-----~--------------~~~v~V~~~~G~---~~ 136 (478)
T 1v59_A 81 KINVANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE-----D--------------ETKIRVTPVDGL---EG 136 (478)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES-----S--------------SSEEEEECCTTC---TT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc-----c--------------CCeEEEEecCCC---cc
Confidence 1122333222 3344556666 6777765531 1 334555543331 11
Q ss_pred E------EEeCEEEEeecccCCCCCCCCCCCCCCCCcccc-eEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHH
Q 010421 142 R------YGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEG-QVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAK 214 (511)
Q Consensus 142 ~------~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g-~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 214 (511)
+ +.||+||+|||+. |. .+| |.+ +.+ .++++.+...+. ..+++|+|||+|.+|+|+|.
T Consensus 137 ~~~~~~~i~~d~lViAtGs~---p~--~~~---g~~-~~~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~ 200 (478)
T 1v59_A 137 TVKEDHILDVKNIIVATGSE---VT--PFP---GIE-IDEEKIVSSTGALSLK-------EIPKRLTIIGGGIIGLEMGS 200 (478)
T ss_dssp CCSSCEEEEEEEEEECCCEE---EC--CCT---TCC-CCSSSEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHH
T ss_pred cccccceEEeCEEEECcCCC---CC--CCC---CCC-CCCceEEcHHHHHhhh-------ccCceEEEECCCHHHHHHHH
Confidence 4 8999999999965 32 234 333 222 467766665432 24799999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHh
Q 010421 215 ECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLL 294 (511)
Q Consensus 215 ~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (511)
.|++.+.+ ||++.|++. ++|..+ ....
T Consensus 201 ~l~~~g~~-----Vtlv~~~~~-~l~~~~-----------~~~~------------------------------------ 227 (478)
T 1v59_A 201 VYSRLGSK-----VTVVEFQPQ-IGASMD-----------GEVA------------------------------------ 227 (478)
T ss_dssp HHHHTTCE-----EEEECSSSS-SSSSSC-----------HHHH------------------------------------
T ss_pred HHHHcCCE-----EEEEEeCCc-cccccC-----------HHHH------------------------------------
Confidence 99998754 999999875 333221 0000
Q ss_pred ccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc----EEEc-----CCceeeccE
Q 010421 295 WKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG----LEFE-----DNTKLEADV 362 (511)
Q Consensus 295 ~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~----v~~~-----dG~~~~~D~ 362 (511)
+.+.+.+++.+|+++.+. +.+++. ++ |+++ +|+++++|.
T Consensus 228 -----------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 228 -----------------------------KATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp -----------------------------HHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred -----------------------------HHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 011123445567777764 677764 22 5555 456799999
Q ss_pred EEEecCCCCccc--ccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 363 VILCTGYDGKKK--LKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 363 VI~aTG~~~~~~--~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
||+|||++|+.. +++..+ +..++++.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|.
T Consensus 279 vv~a~G~~p~~~~l~l~~~g-----~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 279 LLVAVGRRPYIAGLGAEKIG-----LEVDKRGRLVIDDQF-NSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp EEECSCEEECCTTSCTTTTT-----CCBCTTSCBCCCTTS-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEECCCCCcCCCCCCchhcC-----ceeCCCCCEeECcCC-ccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcCC
Confidence 999999999875 222111 111233445454443 3678999999987653 34568999999999988764
No 63
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.93 E-value=3.3e-25 Score=228.17 Aligned_cols=297 Identities=17% Similarity=0.203 Sum_probs=187.8
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+||+|||||++|+++|..| . |.+|+|+|+++.++... +.+ +.. .... ... ...+++.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~-------~~~--~~~---~~g~-~~~------~~~~~~~ 61 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS-------CGI--ALY---LGKE-IKN------NDPRGLF 61 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG-------GGH--HHH---HTTC-BGG------GCGGGGB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc-------ccc--hhh---hcCC-ccc------CCHHHhh
Confidence 4899999999999999999 4 99999999987654211 100 000 0000 000 0001111
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.++....+++++ .++++++|..++.. .+ +|.+.+..+++..++.||+||+|||. .|.
T Consensus 62 ~~~~~~~~~~gv--~~~~~~~v~~i~~~----------------~~--~v~v~~~~~g~~~~~~~d~lviAtGs---~p~ 118 (452)
T 2cdu_A 62 YSSPEELSNLGA--NVQMRHQVTNVDPE----------------TK--TIKVKDLITNEEKTEAYDKLIMTTGS---KPT 118 (452)
T ss_dssp SCCHHHHHHTTC--EEEESEEEEEEEGG----------------GT--EEEEEETTTCCEEEEECSEEEECCCE---EEC
T ss_pred hcCHHHHHHcCC--EEEeCCEEEEEEcC----------------CC--EEEEEecCCCceEEEECCEEEEccCC---CcC
Confidence 112333456777 78889999999862 22 35555532222337999999999994 578
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+. ..++++..+.+..... .....+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+. ++|
T Consensus 119 ~p~i~---g~~~--~~v~~~~~~~~~~~~~-~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~-----Vtlv~~~~~-~l~ 186 (452)
T 2cdu_A 119 VPPIP---GIDS--SRVYLCKNYNDAKKLF-EEAPKAKTITIIGSGYIGAELAEAYSNQNYN-----VNLIDGHER-VLY 186 (452)
T ss_dssp CCCCT---TTTS--TTEEECSSHHHHHHHH-HHGGGCSEEEEECCSHHHHHHHHHHHTTTCE-----EEEEESSSS-TTT
T ss_pred CCCCC---CCCC--CCEEEeCcHHHHHHHH-HHhccCCeEEEECcCHHHHHHHHHHHhcCCE-----EEEEEcCCc-hhh
Confidence 88888 6542 1366655543321100 1224689999999999999999999987654 999999875 222
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccccc
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMA 320 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~ 320 (511)
+.. + ..+
T Consensus 187 ~~~------~----~~~--------------------------------------------------------------- 193 (452)
T 2cdu_A 187 KYF------D----KEF--------------------------------------------------------------- 193 (452)
T ss_dssp TTS------C----HHH---------------------------------------------------------------
T ss_pred hhh------h----hhH---------------------------------------------------------------
Confidence 110 0 000
Q ss_pred ccCCchhhhhccCeEEEEeCc-eeEEeC-Cc-E--EEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCccc
Q 010421 321 IMPEGFFSEAEKGKIVFKRAS-KWWFWK-GG-L--EFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLP 395 (511)
Q Consensus 321 ~~~~~~~~~l~~g~v~v~~~~-i~~~~~-~~-v--~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (511)
.+.+.+.+++.+|+++.+. +.+++. ++ + +..||+++++|.||+|||++++..+++.. +..+.++.+.
T Consensus 194 --~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~------l~~~~~G~i~ 265 (452)
T 2cdu_A 194 --TDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGK------VAMLDNGAII 265 (452)
T ss_dssp --HHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTT------SCBCTTSCBC
T ss_pred --HHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHh------hhcCCCCCEE
Confidence 0011134455667887774 777764 33 3 34488889999999999999997653211 1112344455
Q ss_pred ceeeecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCC
Q 010421 396 LYRGTIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 396 ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~ 437 (511)
+..++ .++.||+|++|..... ...+.|..|++.+|..+.|.
T Consensus 266 Vd~~~-~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 317 (452)
T 2cdu_A 266 TDEYM-HSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTED 317 (452)
T ss_dssp CCTTS-BCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred ECCCc-CcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCC
Confidence 54443 3578999999976542 24578999999999999875
No 64
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.93 E-value=2.3e-25 Score=231.04 Aligned_cols=301 Identities=15% Similarity=0.163 Sum_probs=185.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCC----CCccccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSH----RSDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||+|... ..|...+... .....+..+.++.. ......
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC--EGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC--CCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC--CCccCH
Confidence 47999999999999999999 89999999975 889988541 1221111000 00011122222221 223345
Q ss_pred HHHHHHHHHHHH-----------hcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEe
Q 010421 77 TEILDYLESYAK-----------HFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGF 145 (511)
Q Consensus 77 ~~~~~yl~~~~~-----------~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (511)
.++.+|.+.+.+ +.++ .+..+ ++..++ ...+.|. .++. ++.|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~~~------------------~~~~~v~-~~g~-----~~~~ 149 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIRG-HAAFTS------------------DPKPTIE-VSGK-----KYTA 149 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEECS------------------CSSCEEE-ETTE-----EEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEe-EEEEee------------------CCeEEEE-ECCE-----EEEe
Confidence 555555444433 3333 23332 222211 2335565 2222 6899
Q ss_pred CEEEEeecccCCCCCCC---CCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCC
Q 010421 146 EFLVVCTGKYGDVPIIP---AFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQG 222 (511)
Q Consensus 146 d~vVlAtG~~~~~p~~p---~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~ 222 (511)
|+||+|||. .|..| ++| |.+ ...++.++..+. ..+++|+|||+|.+|+|+|..+++.+.+
T Consensus 150 d~lviAtG~---~p~~p~~~~i~---G~~----~~~~~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l~~~g~~ 212 (478)
T 3dk9_A 150 PHILIATGG---MPSTPHESQIP---GAS----LGITSDGFFQLE-------ELPGRSVIVGAGYIAVEMAGILSALGSK 212 (478)
T ss_dssp SCEEECCCE---EECCCCTTTST---TGG----GSBCHHHHTTCC-------SCCSEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred eEEEEccCC---CCCCCCcCCCC---CCc----eeEchHHhhchh-------hcCccEEEECCCHHHHHHHHHHHHcCCe
Confidence 999999994 67777 777 655 234555554422 3478999999999999999999998764
Q ss_pred CCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccC
Q 010421 223 PEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKY 302 (511)
Q Consensus 223 ~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (511)
|+++.|.+..+ |..+ ... .
T Consensus 213 -----Vtlv~~~~~~l-~~~d-----------~~~----------------------------~---------------- 231 (478)
T 3dk9_A 213 -----TSLMIRHDKVL-RSFD-----------SMI----------------------------S---------------- 231 (478)
T ss_dssp -----EEEECSSSSSC-TTSC-----------HHH----------------------------H----------------
T ss_pred -----EEEEEeCCccc-cccC-----------HHH----------------------------H----------------
Confidence 99999987633 3322 000 0
Q ss_pred CCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc----EEEcC---C----ceeeccEEEEecC
Q 010421 303 GLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG----LEFED---N----TKLEADVVILCTG 368 (511)
Q Consensus 303 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~----v~~~d---G----~~~~~D~VI~aTG 368 (511)
+.+.+.+++.+|+++.+. +.+++. ++ |.+.| | +++++|.||+|||
T Consensus 232 ---------------------~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G 290 (478)
T 3dk9_A 232 ---------------------TNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIG 290 (478)
T ss_dssp ---------------------HHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSC
T ss_pred ---------------------HHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeec
Confidence 011123445567777764 666653 33 45655 2 5689999999999
Q ss_pred CCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 369 YDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
++++...+. ..-.++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 291 ~~p~~~~l~---l~~~g~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 291 RVPNTKDLS---LNKLGIQTDDKGHIIVDEFQ-NTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp EEESCTTSC---GGGGTCCBCTTCCBCCCTTC-BCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCCC---chhcCCeeCCCCCEeeCCCc-ccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 999875211 11111212334445454433 467899999998763 344678999999999998765
No 65
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.92 E-value=5.2e-25 Score=226.31 Aligned_cols=295 Identities=17% Similarity=0.203 Sum_probs=186.7
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+||+|||||++|+++|..| . +.+|+|+|+++.+|.. . +.+ + .+.. ......+++.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~-----~~~--~----~~~~--------~~~~~~~~~~ 59 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--S-----AGM--Q----LYLE--------GKVKDVNSVR 59 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--G-----GGH--H----HHHT--------TSSCCGGGSB
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--c-----ccc--h----hhhc--------CccCCHHHhh
Confidence 4899999999999999999 4 8999999998766411 1 100 0 0000 0001111112
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.++....+++++ .++++++|..++.. .+ +|.+.+..+++..++.||+||+|||. .|.
T Consensus 60 ~~~~~~~~~~gv--~~~~~~~v~~i~~~----------------~~--~v~~~~~~~g~~~~~~~d~lviAtG~---~p~ 116 (447)
T 1nhp_A 60 YMTGEKMESRGV--NVFSNTEITAIQPK----------------EH--QVTVKDLVSGEERVENYDKLIISPGA---VPF 116 (447)
T ss_dssp SCCHHHHHHTTC--EEEETEEEEEEETT----------------TT--EEEEEETTTCCEEEEECSEEEECCCE---EEC
T ss_pred cCCHHHHHHCCC--EEEECCEEEEEeCC----------------CC--EEEEEecCCCceEEEeCCEEEEcCCC---CcC
Confidence 222334455677 78889999998862 22 46665522233335899999999994 578
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhcc--CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCcee
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLL--KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWT 238 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~--~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~ 238 (511)
.|.+| |.+. . .++++..+.+..... .... .+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+. +
T Consensus 117 ~p~i~---G~~~-~-~v~~~~~~~~~~~l~-~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~-----Vtlv~~~~~-~ 184 (447)
T 1nhp_A 117 ELDIP---GKDL-D-NIYLMRGRQWAIKLK-QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKK-----VTVIDILDR-P 184 (447)
T ss_dssp CCCST---TTTS-B-SEECCCHHHHHHHHH-HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSS-T
T ss_pred CCCCC---CCCC-C-CeEEECCHHHHHHHH-HHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCe-----EEEEecCcc-c
Confidence 88888 6542 2 366655543311000 1112 689999999999999999999988754 999999764 2
Q ss_pred ecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccc
Q 010421 239 VPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQ 318 (511)
Q Consensus 239 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 318 (511)
+++.. + ..
T Consensus 185 l~~~~------~----~~-------------------------------------------------------------- 192 (447)
T 1nhp_A 185 LGVYL------D----KE-------------------------------------------------------------- 192 (447)
T ss_dssp TTTTC------C----HH--------------------------------------------------------------
T ss_pred ccccC------C----HH--------------------------------------------------------------
Confidence 22110 0 00
Q ss_pred ccccCCchhhhhccCeEEEEeCc-eeEEeCCc-E--EEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 319 MAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG-L--EFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 319 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~-v--~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
+.+.+.+.+++.+|+++.+. +.+++.++ + +..+|+++++|.||+|||++++..+.+.. +..+.++.+
T Consensus 193 ---~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~d~vi~a~G~~p~~~~~~~~------~~~~~~G~i 263 (447)
T 1nhp_A 193 ---FTDVLTEEMEANNITIATGETVERYEGDGRVQKVVTDKNAYDADLVVVAVGVRPNTAWLKGT------LELHPNGLI 263 (447)
T ss_dssp ---HHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEESSCEEECSEEEECSCEEESCGGGTTT------SCBCTTSCB
T ss_pred ---HHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEECCCEEECCEEEECcCCCCChHHHHhh------hhhcCCCcE
Confidence 00111234556678888864 77887543 2 33367789999999999999987653211 111233434
Q ss_pred cceeeecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCC
Q 010421 395 PLYRGTIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~ 437 (511)
.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|.
T Consensus 264 ~Vd~~~-~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 316 (447)
T 1nhp_A 264 KTDEYM-RTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEEP 316 (447)
T ss_dssp CCCTTC-BCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred EECccc-cCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcCC
Confidence 444433 3578999999976542 23578999999999999875
No 66
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.92 E-value=6.9e-26 Score=235.29 Aligned_cols=304 Identities=14% Similarity=0.072 Sum_probs=183.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC-CCcCceeccCCC----CccccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS-CSYNSTKLQSHR----SDYEFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|++|+|+|++ .+||+|.. ...|...+..+. ....++.+.++.. ......
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD--RISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS--EEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC--CCccCH
Confidence 37999999999999999999 89999999996 59998753 112221110000 0001112222111 112355
Q ss_pred HHHHHHHHHHHHhcCC---------CCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCE
Q 010421 77 TEILDYLESYAKHFDV---------FKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEF 147 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~---------~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~ 147 (511)
.++.+++..+.+++.. ...-.+..+..- .+.++|.+.++. ++.||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~--------------------~~~~~v~~~~~~-----~~~~d~ 139 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKF--------------------LDEHTLQVDDHS-----QVIAKR 139 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEE--------------------EETTEEEETTTE-----EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEE--------------------ecCCEEEEcCCc-----EEEeCE
Confidence 6677776665554321 000011111111 122356664432 799999
Q ss_pred EEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 010421 148 LVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQP 227 (511)
Q Consensus 148 vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~ 227 (511)
||+||| +.|..|.++ +.. ...++++.++..+ ...+++|+|||+|.+|+|+|..|++.+.+
T Consensus 140 lViATG---s~p~~p~~~---~~~--~~~v~t~~~~~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~~----- 199 (492)
T 3ic9_A 140 IVIATG---SRPNYPEFL---AAA--GSRLLTNDNLFEL-------NDLPKSVAVFGPGVIGLELGQALSRLGVI----- 199 (492)
T ss_dssp EEECCC---EECCCCHHH---HTT--GGGEECHHHHTTC-------SSCCSEEEEESSCHHHHHHHHHHHHTTCE-----
T ss_pred EEEccC---CCCcCCCCC---Ccc--CCcEEcHHHHhhh-------hhcCCeEEEECCCHHHHHHHHHHHHcCCe-----
Confidence 999999 467888765 322 2346666665442 24589999999999999999999998764
Q ss_pred EEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCC
Q 010421 228 CTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPD 307 (511)
Q Consensus 228 Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 307 (511)
|+++.|++.. +|..+ . .. .
T Consensus 200 Vtlv~~~~~~-l~~~d-------~----~~----------------------------~--------------------- 218 (492)
T 3ic9_A 200 VKVFGRSGSV-ANLQD-------E----EM----------------------------K--------------------- 218 (492)
T ss_dssp EEEECCTTCC-TTCCC-------H----HH----------------------------H---------------------
T ss_pred EEEEEECCcc-cccCC-------H----HH----------------------------H---------------------
Confidence 9999998763 23221 0 00 0
Q ss_pred CccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc--EEEc--CC--ceeeccEEEEecCCCCccccccc
Q 010421 308 HPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG--LEFE--DN--TKLEADVVILCTGYDGKKKLKAF 378 (511)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~--v~~~--dG--~~~~~D~VI~aTG~~~~~~~~~~ 378 (511)
+.+.+.+++. |+++.+. +.+++. ++ +.+. || +++++|.||+|||++|+..++.
T Consensus 219 ----------------~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~- 280 (492)
T 3ic9_A 219 ----------------RYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLG- 280 (492)
T ss_dssp ----------------HHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSC-
T ss_pred ----------------HHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCC-
Confidence 0011234444 6666654 666643 33 4454 67 5699999999999999876521
Q ss_pred CCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcC
Q 010421 379 LPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 379 ~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g 436 (511)
..-.++..++++.+.+....+.++.||+|++|..... ...+.+..|++.+|..+.+
T Consensus 281 --l~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 281 --LENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp --GGGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred --hhhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 1111122233344433312234578999999987654 3456899999999998865
No 67
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.92 E-value=7.6e-25 Score=227.30 Aligned_cols=307 Identities=15% Similarity=0.149 Sum_probs=188.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc-c--CCCcEEEc--------CCCCcCccccCC-CcCceeccCCCCc----cccCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL-R--HHNPVVFE--------ASDSIGGIWKSC-SYNSTKLQSHRSD----YEFTDFPWP 66 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l-~--g~~v~v~e--------~~~~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~ 66 (511)
..+||+|||||++|+++|..| . |++|+|+| +...+||+|... .+|...+...... .....+.+.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 458999999999999999999 5 89999999 357899988641 1222111000000 001111111
Q ss_pred CCCCCC--CCChHHHHHHH-----------HHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEE
Q 010421 67 NRDDPG--FPSYTEILDYL-----------ESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAV 132 (511)
Q Consensus 67 ~~~~~~--~~~~~~~~~yl-----------~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 132 (511)
.. .. .....++.++. ....++. ++ .+..+ ++..++. . ++.+
T Consensus 82 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~------------------~--~v~v 136 (490)
T 1fec_A 82 LD--RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQG-FGALQDN------------------H--TVLV 136 (490)
T ss_dssp CC--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEES-EEEEEET------------------T--EEEE
T ss_pred cC--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEe-EEEEeeC------------------C--EEEE
Confidence 00 00 11233333332 2333444 55 45544 3555542 1 3555
Q ss_pred EeC--CCCc-eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCH
Q 010421 133 QTH--NSNS-IQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSA 209 (511)
Q Consensus 133 ~~~--~~~~-~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg 209 (511)
.+. .+++ ...+.||+||+|||+ .|..|.+| |.+ .++++.++..+. ..+++|+|||+|.+|
T Consensus 137 ~~~~~~~g~~~~~~~~d~lviAtGs---~p~~p~i~---g~~----~~~~~~~~~~~~-------~~~~~vvViGgG~ig 199 (490)
T 1fec_A 137 RESADPNSAVLETLDTEYILLATGS---WPQHLGIE---GDD----LCITSNEAFYLD-------EAPKRALCVGGGYIS 199 (490)
T ss_dssp ESSSSTTSCEEEEEEEEEEEECCCE---EECCCCSB---TGG----GCBCHHHHTTCS-------SCCSEEEEECSSHHH
T ss_pred EeeccCCCCceEEEEcCEEEEeCCC---CCCCCCCC---Ccc----ceecHHHHhhhh-------hcCCeEEEECCCHHH
Confidence 431 1121 137899999999994 57788787 653 244555544321 357899999999999
Q ss_pred HHHHHHHHHh---cCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHH
Q 010421 210 IDLAKECAES---NQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVS 286 (511)
Q Consensus 210 ~d~a~~l~~~---~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (511)
+|+|..|++. +. +|+++.|.+. ++|..+ ...
T Consensus 200 ~E~A~~l~~~~~~g~-----~Vtlv~~~~~-~l~~~d-----------~~~----------------------------- 233 (490)
T 1fec_A 200 IEFAGIFNAYKARGG-----QVDLAYRGDM-ILRGFD-----------SEL----------------------------- 233 (490)
T ss_dssp HHHHHHHHHHSCTTC-----EEEEEESSSS-SSTTSC-----------HHH-----------------------------
T ss_pred HHHHHHHHhhccCcC-----eEEEEEcCCC-cccccC-----------HHH-----------------------------
Confidence 9999999998 65 4999999875 333321 000
Q ss_pred HHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC-----cEEEcCCceeec
Q 010421 287 KFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG-----GLEFEDNTKLEA 360 (511)
Q Consensus 287 ~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~-----~v~~~dG~~~~~ 360 (511)
...+.+.+++.+|+++.+. +.+++.+ .|+++||+++++
T Consensus 234 ------------------------------------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~ 277 (490)
T 1fec_A 234 ------------------------------------RKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADY 277 (490)
T ss_dssp ------------------------------------HHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEE
T ss_pred ------------------------------------HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEc
Confidence 0011234556678888874 7777643 367789989999
Q ss_pred cEEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCC
Q 010421 361 DVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 361 D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
|.||+|||++++...+ ...-.++..++++.+.+...+ .++.||+|++|.... +...+.+..|++.+|..+.|.
T Consensus 278 D~vv~a~G~~p~~~~L---~l~~~gl~~~~~G~I~Vd~~~-~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 278 DVVMLAIGRVPRSQTL---QLEKAGVEVAKNGAIKVDAYS-KTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp SEEEECSCEEESCTTS---CGGGGTCCBCTTSCBCCCTTC-BCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHSS
T ss_pred CEEEEccCCCcCcccc---CchhcCccCCCCCCEEECCCC-ccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcCC
Confidence 9999999999987521 001111112334445554443 357899999998765 335678999999999988764
No 68
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.92 E-value=8.4e-25 Score=225.62 Aligned_cols=299 Identities=17% Similarity=0.166 Sum_probs=184.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc----ccCCCCCCCCCCCCCCCh
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY----EFTDFPWPNRDDPGFPSY 76 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (511)
.+||+|||||++|+++|..| .|.+|+|+|++. +||+|... ..|...+......+ .+..+.++. ......
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~---~~~~~~ 81 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA---KPELDL 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC---CCEECH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC---CCCcCH
Confidence 47999999999999999999 899999999976 99988541 11211100000000 011111110 011122
Q ss_pred HHH-------HHH----HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEe
Q 010421 77 TEI-------LDY----LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGF 145 (511)
Q Consensus 77 ~~~-------~~y----l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 145 (511)
.++ .++ +....++.++ .+..++.+ .++. ++|.+. +. ++.|
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~-~~~~--------------------~~v~v~-g~-----~~~~ 132 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFAR-LVGP--------------------KEVEVG-GE-----RYGA 132 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCEE-EEET--------------------TEEEET-TE-----EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeEE-EccC--------------------CEEEEc-cE-----EEEe
Confidence 222 222 2334455666 56666543 2321 145554 22 7899
Q ss_pred CEEEEeecccCCCCCCCC-CCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCC
Q 010421 146 EFLVVCTGKYGDVPIIPA-FPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPE 224 (511)
Q Consensus 146 d~vVlAtG~~~~~p~~p~-~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~ 224 (511)
|+||+|||+ .|..|+ ++ +. +.++++.++..+. ...+++|+|||+|.+|+|+|..|++.+.+
T Consensus 133 d~lViATGs---~p~~p~gi~---~~----~~v~~~~~~~~l~------~~~~~~vvViGgG~~g~e~A~~l~~~g~~-- 194 (464)
T 2eq6_A 133 KSLILATGS---EPLELKGFP---FG----EDVWDSTRALKVE------EGLPKRLLVIGGGAVGLELGQVYRRLGAE-- 194 (464)
T ss_dssp EEEEECCCE---EECCBTTBC---CS----SSEECHHHHTCGG------GCCCSEEEEECCSHHHHHHHHHHHHTTCE--
T ss_pred CEEEEcCCC---CCCCCCCCC---CC----CcEEcHHHHHhhh------hhcCCEEEEECCCHHHHHHHHHHHHCCCe--
Confidence 999999995 567664 65 42 1466776665432 22578999999999999999999988754
Q ss_pred CCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCC
Q 010421 225 GQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGL 304 (511)
Q Consensus 225 ~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (511)
|+++.|.+. ++|... ..+ .
T Consensus 195 ---Vtlv~~~~~-~l~~~~-----------~~~----------------------------~------------------ 213 (464)
T 2eq6_A 195 ---VTLIEYMPE-ILPQGD-----------PET----------------------------A------------------ 213 (464)
T ss_dssp ---EEEECSSSS-SSTTSC-----------HHH----------------------------H------------------
T ss_pred ---EEEEEcCCc-cccccC-----------HHH----------------------------H------------------
Confidence 999999875 333221 000 0
Q ss_pred CCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--c--EEEc-C--Cc--eeeccEEEEecCCCCccc
Q 010421 305 KPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--G--LEFE-D--NT--KLEADVVILCTGYDGKKK 374 (511)
Q Consensus 305 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~--v~~~-d--G~--~~~~D~VI~aTG~~~~~~ 374 (511)
+.+.+.+++.+|+++.+. +.+++.+ + |.++ | |+ ++++|.||+|||++++..
T Consensus 214 -------------------~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 214 -------------------ALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp -------------------HHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred -------------------HHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 011123445567777764 6676543 2 5565 6 87 799999999999999876
Q ss_pred ccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 375 LKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
++. ....++..++++.+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|.
T Consensus 275 ~l~---l~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 275 GLG---LEKAGVKVDERGFIRVNARM-ETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAGK 334 (464)
T ss_dssp TSS---HHHHTCCBCTTSCBCCCTTC-BCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred CCC---hhhcCceecCCCCEEECCCc-ccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 421 01011111233445454443 3678999999987653 34568999999999999874
No 69
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.92 E-value=1.9e-25 Score=230.15 Aligned_cols=303 Identities=16% Similarity=0.140 Sum_probs=182.7
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCcc---ccCCCCCCCCCCCCCCChHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDY---EFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 78 (511)
+||+|||||++|+++|..| .|++|+|+|+++.+||+|... ..|...+......+ ....+.++.. .......+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~--~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK--GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC--CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC--CCccCHHH
Confidence 6999999999999999999 899999999998999998641 11211110000000 0011111100 00112222
Q ss_pred HHHH-----------HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCE
Q 010421 79 ILDY-----------LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEF 147 (511)
Q Consensus 79 ~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~ 147 (511)
+..+ +...+++.++ .+..++.+ .+ + ...+.|.. ++ . ++.||+
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~~-~i----~--------------~~~~~v~~-~g---~--~~~~d~ 132 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTAR-FL----S--------------ERKVLVEE-TG---E--ELEARY 132 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEE-ES----S--------------SSEEEETT-TC---C--EEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEE-Ee----c--------------CCeEEEee-CC---E--EEEecE
Confidence 2222 3344555666 55655432 11 1 22333322 22 2 789999
Q ss_pred EEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCc
Q 010421 148 LVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQP 227 (511)
Q Consensus 148 vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~ 227 (511)
||+|||+ .|..|.++ |.+. ..++++.++..+. ..+++|+|||+|.+|+|+|..|++.+.+
T Consensus 133 lviAtG~---~p~~~~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~g~~----- 192 (455)
T 2yqu_A 133 ILIATGS---APLIPPWA---QVDY--ERVVTSTEALSFP-------EVPKRLIVVGGGVIGLELGVVWHRLGAE----- 192 (455)
T ss_dssp EEECCCE---EECCCTTB---CCCS--SSEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHHHHHTTCE-----
T ss_pred EEECCCC---CCCCCCCC---CCCc--CcEechHHhhccc-------cCCCeEEEECCCHHHHHHHHHHHHcCCE-----
Confidence 9999995 57777776 5332 1366766654422 3568999999999999999999988754
Q ss_pred EEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCC
Q 010421 228 CTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPD 307 (511)
Q Consensus 228 Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 307 (511)
|+++.+.+. ++|... ..+.
T Consensus 193 V~lv~~~~~-~l~~~~-----------~~~~------------------------------------------------- 211 (455)
T 2yqu_A 193 VIVLEYMDR-ILPTMD-----------LEVS------------------------------------------------- 211 (455)
T ss_dssp EEEECSSSS-SCTTSC-----------HHHH-------------------------------------------------
T ss_pred EEEEecCCc-cccccC-----------HHHH-------------------------------------------------
Confidence 999999875 233221 0000
Q ss_pred CccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc--EEEcCCceeeccEEEEecCCCCcccccccCCCc
Q 010421 308 HPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG--LEFEDNTKLEADVVILCTGYDGKKKLKAFLPEP 382 (511)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~--v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~ 382 (511)
+.+.+.+++.+|+++.+. +.+++. ++ +.++||+++++|.||+|||++++..++. .+
T Consensus 212 ----------------~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~---~~ 272 (455)
T 2yqu_A 212 ----------------RAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLS---LE 272 (455)
T ss_dssp ----------------HHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCC---GG
T ss_pred ----------------HHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCC---hh
Confidence 001122333456777653 666653 23 4456888899999999999999875421 11
Q ss_pred ccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 383 FQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 383 ~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
..++..+.++.+.+...+ .++.|++|++|..... ...+.+..|++.+|..+.|+
T Consensus 273 ~~g~~~~~~g~i~vd~~~-~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 273 NAGLSTDERGRIPVDEHL-RTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp GGTCCCCTTSCCCCCTTS-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred hcCCccCCCCcEeECCCc-ccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 111111223334444443 3678999999977553 33567999999999998764
No 70
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.92 E-value=4.7e-25 Score=227.15 Aligned_cols=298 Identities=18% Similarity=0.186 Sum_probs=183.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCC----ccccCC---CCCCCCCCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRS----DYEFTD---FPWPNRDDPGF 73 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~ 73 (511)
.+||+|||||++|+++|..| .|.+|+|+|+ +.+||+|... ..|...+..... ...+.. +.++.. ...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~--~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA--SPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC--CCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC--CCc
Confidence 47999999999999999999 8999999999 7899998641 122111000000 001111 222211 112
Q ss_pred CChHHHHHH-----------HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeE
Q 010421 74 PSYTEILDY-----------LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQR 142 (511)
Q Consensus 74 ~~~~~~~~y-----------l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 142 (511)
....++..+ +..+.++.++ .++.++.+. ++. ++|.+.+ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~~-~~~--------------------~~v~v~~------~~ 132 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAKV-LDG--------------------KQVEVDG------QR 132 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEEE-EET--------------------TEEEETT------EE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEEE-ccC--------------------CEEEEee------EE
Confidence 233444333 2344556666 566665433 221 2465543 27
Q ss_pred EEeCEEEEeecccCCCCCCCC-CCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC
Q 010421 143 YGFEFLVVCTGKYGDVPIIPA-FPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ 221 (511)
Q Consensus 143 ~~~d~vVlAtG~~~~~p~~p~-~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~ 221 (511)
+.||+||+|||+ .|..|+ ++ . .+.++++.++..+. ..+++|+|||+|.+|+|+|..|++.+.
T Consensus 133 ~~~d~lviATGs---~p~~~~~~~---~----~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~~~g~ 195 (458)
T 1lvl_A 133 IQCEHLLLATGS---SSVELPMLP---L----GGPVISSTEALAPK-------ALPQHLVVVGGGYIGLELGIAYRKLGA 195 (458)
T ss_dssp EECSEEEECCCE---EECCBTTBC---C----BTTEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHHHHHHTC
T ss_pred EEeCEEEEeCCC---CCCCCCCCC---c----cCcEecHHHHhhhh-------ccCCeEEEECcCHHHHHHHHHHHHCCC
Confidence 899999999995 466554 43 1 12467776665432 257899999999999999999999876
Q ss_pred CCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCccc
Q 010421 222 GPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLK 301 (511)
Q Consensus 222 ~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (511)
+ |+++.|.+. ++|... ....
T Consensus 196 ~-----Vtlv~~~~~-~l~~~~-----------~~~~------------------------------------------- 215 (458)
T 1lvl_A 196 Q-----VSVVEARER-ILPTYD-----------SELT------------------------------------------- 215 (458)
T ss_dssp E-----EEEECSSSS-SSTTSC-----------HHHH-------------------------------------------
T ss_pred e-----EEEEEcCCc-cccccC-----------HHHH-------------------------------------------
Confidence 4 999999875 333221 0000
Q ss_pred CCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEc--CC--ceeeccEEEEecCCCCccccc
Q 010421 302 YGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFE--DN--TKLEADVVILCTGYDGKKKLK 376 (511)
Q Consensus 302 ~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~--dG--~~~~~D~VI~aTG~~~~~~~~ 376 (511)
+.+.+.+++.+|+++.+. +.+++.+++.+. +| +++++|.||+|||++++..++
T Consensus 216 ----------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l 273 (458)
T 1lvl_A 216 ----------------------APVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTKGF 273 (458)
T ss_dssp ----------------------HHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCSSS
T ss_pred ----------------------HHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCCCC
Confidence 001122334456676664 677765335444 67 579999999999999987642
Q ss_pred ccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-hhhhhHHHHHHHHHHHhcCC
Q 010421 377 AFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-~~~~~~e~qa~~~a~~l~g~ 437 (511)
. ....++..+.. .+.+...+ .++.||+|++|..... ...+.+..|++.+|..+.|+
T Consensus 274 ~---~~~~g~~~~~~-~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 330 (458)
T 1lvl_A 274 N---LECLDLKMNGA-AIAIDERC-QTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGK 330 (458)
T ss_dssp S---GGGSCCCEETT-EECCCTTC-BCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTTC
T ss_pred C---cHhcCCcccCC-EEeECCCC-cCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 1 01011111122 34444433 3678999999987653 34568999999999999874
No 71
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.92 E-value=2.2e-24 Score=224.07 Aligned_cols=307 Identities=17% Similarity=0.160 Sum_probs=186.5
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcC--------CCCcCccccCC-CcCceeccCCCC----ccccCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEA--------SDSIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPN 67 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~--------~~~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 67 (511)
+.+||+|||||++|+++|..| .|.+|+|+|+ ...+||+|... .+|...+..+.. ......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 358999999999999999999 8999999997 56799998651 122211100000 00111222221
Q ss_pred CCCCCCCChHHHHHHHHHHHHh-----------cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCC
Q 010421 68 RDDPGFPSYTEILDYLESYAKH-----------FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHN 136 (511)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~~~-----------~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (511)
. ........++..+.+.+.++ .++ .+ +..++..++ .. .+.+...
T Consensus 85 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~-i~g~~~~~~------------------~~--~v~v~~~- 139 (488)
T 3dgz_A 85 A-QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKV--KY-FNIKASFVD------------------EH--TVRGVDK- 139 (488)
T ss_dssp C-SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECCEEEESS------------------SS--EEEEECT-
T ss_pred C-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEEEEEEcc------------------CC--eEEEEeC-
Confidence 1 12234555666665544432 222 11 222322211 22 3444432
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCC-CCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHH
Q 010421 137 SNSIQRYGFEFLVVCTGKYGDVPIIPA-FPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKE 215 (511)
Q Consensus 137 ~~~~~~~~~d~vVlAtG~~~~~p~~p~-~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~ 215 (511)
++...++.||+||+||| +.|..|. +| |.+. ..+++.++..+ ...+++|+|||+|.+|+|+|..
T Consensus 140 ~g~~~~~~~d~lViATG---s~p~~p~~i~---G~~~---~~~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A~~ 203 (488)
T 3dgz_A 140 GGKATLLSAEHIVIATG---GRPRYPTQVK---GALE---YGITSDDIFWL-------KESPGKTLVVGASYVALECAGF 203 (488)
T ss_dssp TSCEEEEEEEEEEECCC---EEECCCSSCB---THHH---HCBCHHHHTTC-------SSCCCSEEEECCSHHHHHHHHH
T ss_pred CCceEEEECCEEEEcCC---CCCCCCCCCC---Cccc---ccCcHHHHHhh-------hhcCCeEEEECCCHHHHHHHHH
Confidence 23344799999999999 4688887 88 6532 23455554432 2356899999999999999999
Q ss_pred HHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhc
Q 010421 216 CAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLW 295 (511)
Q Consensus 216 l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (511)
+++.+.+ ||++.|+. ++|..+ . .+ .
T Consensus 204 l~~~g~~-----Vtlv~~~~--~l~~~d-------~----~~----------------------------~--------- 228 (488)
T 3dgz_A 204 LTGIGLD-----TTVMMRSI--PLRGFD-------Q----QM----------------------------S--------- 228 (488)
T ss_dssp HHHTTCC-----EEEEESSC--SSTTSC-------H----HH----------------------------H---------
T ss_pred HHHcCCc-----eEEEEcCc--ccccCC-------H----HH----------------------------H---------
Confidence 9998765 99999864 233221 0 00 0
Q ss_pred cCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc---EEEcC---Cc--eeeccEEE
Q 010421 296 KLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG---LEFED---NT--KLEADVVI 364 (511)
Q Consensus 296 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~---v~~~d---G~--~~~~D~VI 364 (511)
+.+.+.+++.+|+++.+. +.+++. ++ |++.+ |+ ++++|.||
T Consensus 229 ----------------------------~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi 280 (488)
T 3dgz_A 229 ----------------------------SLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVL 280 (488)
T ss_dssp ----------------------------HHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEE
T ss_pred ----------------------------HHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEE
Confidence 011123455567777764 666643 22 55554 55 37899999
Q ss_pred EecCCCCcccccccCCCcccccccC-CCCcccceeeecCCCCCceEEEeecc-c-chhhhhHHHHHHHHHHHhcCC
Q 010421 365 LCTGYDGKKKLKAFLPEPFQSLLEH-PSGLLPLYRGTIHPLIPNMAFVGYIE-S-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 365 ~aTG~~~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~~~~~~~pnl~~iG~~~-~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
+|||++|+..++.. .-.++..+ +++.+.+..++ .++.||||++|... . +...+.+..|++.+|..+.|.
T Consensus 281 ~a~G~~p~~~~l~l---~~~g~~~~~~~G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 281 WAIGRVPETRTLNL---EKAGISTNPKNQKIIVDAQE-ATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp ECSCEEESCGGGTG---GGGTCCBCSSSCCBCCCTTS-BCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred EcccCCcccCcCCc---cccCcEecCCCCeEeECCCC-ccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 99999998765321 11112223 34445554443 35789999999875 2 344578999999999998764
No 72
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.92 E-value=2.2e-24 Score=223.56 Aligned_cols=309 Identities=14% Similarity=0.088 Sum_probs=184.5
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC------cCccccCC-CcCceeccCCCCcc-----ccCCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS------IGGIWKSC-SYNSTKLQSHRSDY-----EFTDFPWPNR 68 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~------~GG~w~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~ 68 (511)
+.+||+|||||++|+++|..| .|++|+|+|++.. +||+|... ..|...+......+ .+..+.++..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 468999999999999999999 8999999999874 55555331 11111100000000 0111111100
Q ss_pred CCCCCCChHHHHHHHH-----------HHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCC
Q 010421 69 DDPGFPSYTEILDYLE-----------SYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNS 137 (511)
Q Consensus 69 ~~~~~~~~~~~~~yl~-----------~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 137 (511)
........+..+.. ...++.++ .+..++ +..++ ...+.|...+
T Consensus 82 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g~-~~~~~------------------~~~~~v~~~~--- 135 (476)
T 3lad_A 82 --EVAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFEGH-GKLLA------------------GKKVEVTAAD--- 135 (476)
T ss_dssp --CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESE-EEECS------------------TTCEEEECTT---
T ss_pred --CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEec------------------CCEEEEEcCC---
Confidence 11122333333322 33344455 444433 22211 3344454322
Q ss_pred CceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHH
Q 010421 138 NSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECA 217 (511)
Q Consensus 138 ~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~ 217 (511)
+....+.||+||+|||. .|..|..+ +.+ ...++++.+...+ ...+++|+|||+|.+|+|+|..++
T Consensus 136 g~~~~~~~d~lvlAtG~---~p~~~~~~---~~~--~~~v~~~~~~~~~-------~~~~~~v~ViGgG~~g~e~A~~l~ 200 (476)
T 3lad_A 136 GSSQVLDTENVILASGS---KPVEIPPA---PVD--QDVIVDSTGALDF-------QNVPGKLGVIGAGVIGLELGSVWA 200 (476)
T ss_dssp SCEEEECCSCEEECCCE---EECCCTTS---CCC--SSSEEEHHHHTSC-------SSCCSEEEEECCSHHHHHHHHHHH
T ss_pred CceEEEEcCEEEEcCCC---CCCCCCCC---CCC--cccEEechhhhcc-------ccCCCeEEEECCCHHHHHHHHHHH
Confidence 33347899999999995 45655433 211 2246676665542 246789999999999999999999
Q ss_pred HhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccC
Q 010421 218 ESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKL 297 (511)
Q Consensus 218 ~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (511)
+.+.+ |+++.|.+. ++|... ..
T Consensus 201 ~~g~~-----Vtlv~~~~~-~l~~~~-----------~~----------------------------------------- 222 (476)
T 3lad_A 201 RLGAE-----VTVLEAMDK-FLPAVD-----------EQ----------------------------------------- 222 (476)
T ss_dssp HTTCE-----EEEEESSSS-SSTTSC-----------HH-----------------------------------------
T ss_pred HcCCc-----EEEEecCCC-cCcccC-----------HH-----------------------------------------
Confidence 88764 999999875 233221 00
Q ss_pred CcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC--c--EEEcCC---ceeeccEEEEecCC
Q 010421 298 PLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG--G--LEFEDN---TKLEADVVILCTGY 369 (511)
Q Consensus 298 ~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~--~--v~~~dG---~~~~~D~VI~aTG~ 369 (511)
+.+.+.+.+++.+|+++.+. +.+++.+ + +++.++ +++++|.||+|||+
T Consensus 223 ------------------------~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~ 278 (476)
T 3lad_A 223 ------------------------VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR 278 (476)
T ss_dssp ------------------------HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCE
T ss_pred ------------------------HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC
Confidence 00111234556678888775 7777643 2 566655 56999999999999
Q ss_pred CCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc-chhhhhHHHHHHHHHHHhcCCC
Q 010421 370 DGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES-VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~-~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+|+..++. ..-.++..++++.+.+...+ .++.||||++|.... +...+.+..|++.+|..+.|+.
T Consensus 279 ~p~~~~l~---~~~~g~~~~~~G~i~vd~~~-~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 279 RPVTTDLL---AADSGVTLDERGFIYVDDYC-ATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp EECCTTCC---SSCCSCCBCTTSCBCCCTTS-BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCC---ccccCccccCCCCEeeCCCc-ccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCCC
Confidence 99875321 11111222334445444443 367899999998764 3446789999999999987653
No 73
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.92 E-value=4.9e-24 Score=222.69 Aligned_cols=307 Identities=18% Similarity=0.188 Sum_probs=184.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC--------CcCccccCC-CcCceeccCCCC----ccccCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD--------SIGGIWKSC-SYNSTKLQSHRS----DYEFTDFPWPN 67 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~--------~~GG~w~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 67 (511)
..+||+|||||++|+++|..| .|.+|+|+|+++ .+||+|... ..|...+..+.. ...+..+.++.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 357999999999999999999 899999999954 789988651 122211111000 00111222221
Q ss_pred CCCCCCCChHHHHHHHHHHHHh-----------cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCC
Q 010421 68 RDDPGFPSYTEILDYLESYAKH-----------FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHN 136 (511)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~~~-----------~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (511)
. .........+.++.+.+.++ .++ .+. ..++..++. . ++.+...+
T Consensus 111 ~-~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV--~~i-~g~a~~~d~------------------~--~v~v~~~~ 166 (519)
T 3qfa_A 111 E-ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKV--VYE-NAYGQFIGP------------------H--RIKATNNK 166 (519)
T ss_dssp C-SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEET------------------T--EEEEECTT
T ss_pred C-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-EEEEEEeeC------------------C--EEEEEcCC
Confidence 1 12234556666665554432 233 222 233433332 2 34444322
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHH
Q 010421 137 SNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKEC 216 (511)
Q Consensus 137 ~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l 216 (511)
++..++.||+|||||| +.|..|.+| |.+. .++++.++..+ ....++|+|||+|.+|+|+|..|
T Consensus 167 -g~~~~i~~d~lViATG---s~p~~p~i~---G~~~---~~~t~~~~~~l-------~~~~~~vvVIGgG~ig~E~A~~l 229 (519)
T 3qfa_A 167 -GKEKIYSAERFLIATG---ERPRYLGIP---GDKE---YCISSDDLFSL-------PYCPGKTLVVGASYVALECAGFL 229 (519)
T ss_dssp -CCCCEEEEEEEEECCC---EEECCCCCT---THHH---HCBCHHHHTTC-------SSCCCSEEEECCSHHHHHHHHHH
T ss_pred -CCEEEEECCEEEEECC---CCcCCCCCC---CccC---ceEcHHHHhhh-------hhcCCeEEEECCcHHHHHHHHHH
Confidence 3334799999999999 468888888 6443 24455554432 24567899999999999999999
Q ss_pred HHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc
Q 010421 217 AESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWK 296 (511)
Q Consensus 217 ~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (511)
++.+.+ ||++.|+. ++|..+ . .. .
T Consensus 230 ~~~G~~-----Vtlv~~~~--~l~~~d-------~----~~----------------------------~---------- 253 (519)
T 3qfa_A 230 AGIGLD-----VTVMVRSI--LLRGFD-------Q----DM----------------------------A---------- 253 (519)
T ss_dssp HHTTCC-----EEEEESSC--SSTTSC-------H----HH----------------------------H----------
T ss_pred HHcCCe-----EEEEeccc--ccccCC-------H----HH----------------------------H----------
Confidence 998765 99999852 333322 0 00 0
Q ss_pred CCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeE---EeC---CcE--E--EcCCc---eeeccE
Q 010421 297 LPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWW---FWK---GGL--E--FEDNT---KLEADV 362 (511)
Q Consensus 297 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~---~~~---~~v--~--~~dG~---~~~~D~ 362 (511)
+.+.+.+++.+|+++.+. +.+ +.. +++ . ..+|. ++++|.
T Consensus 254 ---------------------------~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 254 ---------------------------NKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp ---------------------------HHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred ---------------------------HHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 011123445566666653 333 332 222 2 24553 468999
Q ss_pred EEEecCCCCcccccccCCCcccccccC-CCCcccceeeecCCCCCceEEEeecc-c-chhhhhHHHHHHHHHHHhcCC
Q 010421 363 VILCTGYDGKKKLKAFLPEPFQSLLEH-PSGLLPLYRGTIHPLIPNMAFVGYIE-S-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 363 VI~aTG~~~~~~~~~~~~~~~~~~~~~-~~~~~~ly~~~~~~~~pnl~~iG~~~-~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
||+|||++|+..++. ..-.++..+ ..+.+.+...+ .++.||||++|... . +...+.+..|++.+|..+.|.
T Consensus 307 vi~a~G~~p~~~~l~---l~~~gl~~~~~~G~I~Vd~~~-~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 307 VMLAIGRDACTRKIG---LETVGVKINEKTGKIPVTDEE-QTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp EEECSCEEESCSSSC---STTTTCCCCTTTCCBCCCTTS-BCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHSC
T ss_pred EEEecCCcccCCCCC---hhhcCcEEcCCCCeEeeCCCC-ccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 999999999876422 111112122 23445554443 36789999999876 3 345678999999999988764
No 74
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.92 E-value=7.8e-25 Score=226.87 Aligned_cols=296 Identities=16% Similarity=0.213 Sum_probs=183.9
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+||+|||||++|+++|..| . +.+|+|+|+++..++... .+ +. ... ......+++.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-------~~--~~---~~~---------~~~~~~~~l~ 95 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-------GL--PY---VIS---------GAIASTEKLI 95 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-------GH--HH---HHT---------TSSSCGGGGB
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-------Cc--ch---hhc---------CCcCCHHHhh
Confidence 6999999999999999999 3 899999999876642211 00 00 000 0001111111
Q ss_pred -HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 81 -DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 81 -~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
.+.+.+.+++++ .++++++|+.++.. .+ .|.+.+..+++..++.||+||+|||. .|
T Consensus 96 ~~~~~~~~~~~gv--~~~~~~~v~~i~~~----------------~~--~v~v~~~~~g~~~~~~~d~lviAtG~---~p 152 (480)
T 3cgb_A 96 ARNVKTFRDKYGI--DAKVRHEVTKVDTE----------------KK--IVYAEHTKTKDVFEFSYDRLLIATGV---RP 152 (480)
T ss_dssp SSCHHHHHHTTCC--EEESSEEEEEEETT----------------TT--EEEEEETTTCCEEEEECSEEEECCCE---EE
T ss_pred hcCHHHHHhhcCC--EEEeCCEEEEEECC----------------CC--EEEEEEcCCCceEEEEcCEEEECCCC---cc
Confidence 123344466677 78888999999862 22 35555422233346899999999994 57
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhh-hhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCcee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEA-ASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWT 238 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~-~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~ 238 (511)
..|++| |.+. . .+++...+.+..... ......+++|+|||+|.+|+|+|..+++.+.+ |+++.|.+. +
T Consensus 153 ~~p~i~---G~~~-~-~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~-----Vtlv~~~~~-~ 221 (480)
T 3cgb_A 153 VMPEWE---GRDL-Q-GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKK-----VRMIERNDH-I 221 (480)
T ss_dssp CCCCCB---TTTS-B-TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCE-----EEEECCGGG-T
T ss_pred cCCCCC---CccC-C-CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCe-----EEEEEeCCc-h
Confidence 888888 6542 1 255544333211000 00012689999999999999999999988754 999999764 2
Q ss_pred ecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcccccccccc
Q 010421 239 VPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQ 318 (511)
Q Consensus 239 ~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~ 318 (511)
++... ..+ .
T Consensus 222 l~~~~-----------~~~----------------------------~-------------------------------- 230 (480)
T 3cgb_A 222 GTIYD-----------GDM----------------------------A-------------------------------- 230 (480)
T ss_dssp TSSSC-----------HHH----------------------------H--------------------------------
T ss_pred hhcCC-----------HHH----------------------------H--------------------------------
Confidence 22111 000 0
Q ss_pred ccccCCchhhhhccCeEEEEeCc-eeEEeCCc-E--EEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcc
Q 010421 319 MAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGG-L--EFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLL 394 (511)
Q Consensus 319 ~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~-v--~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (511)
+.+.+.+++.+|+++.+. +.+++.++ + +..++.++++|.||+|||++++..+++..+.. .++++.+
T Consensus 231 -----~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~~~g~~-----~~~~G~I 300 (480)
T 3cgb_A 231 -----EYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLEGTNIR-----TNHKGAI 300 (480)
T ss_dssp -----HHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGTTSCCC-----BCTTSCB
T ss_pred -----HHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHHhCCcc-----cCCCCCE
Confidence 011123444556776654 66776543 3 23355689999999999999987654322211 1233444
Q ss_pred cceeeecCCCCCceEEEeecccc-----------hhhhhHHHHHHHHHHHhcCC
Q 010421 395 PLYRGTIHPLIPNMAFVGYIESV-----------SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 395 ~ly~~~~~~~~pnl~~iG~~~~~-----------~~~~~~e~qa~~~a~~l~g~ 437 (511)
.+...+ .++.||+|++|..... .....+..|++.+|..+.|+
T Consensus 301 ~Vd~~~-~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 353 (480)
T 3cgb_A 301 EVNAYM-QTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLDK 353 (480)
T ss_dssp CCCTTS-BCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred EECCCc-cCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcCC
Confidence 444433 3568999999976531 23578999999999999875
No 75
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.92 E-value=6.2e-25 Score=223.28 Aligned_cols=297 Identities=13% Similarity=0.044 Sum_probs=188.0
Q ss_pred CeEEEECCCHHHHHHHHhc-c----CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL-R----HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l-~----g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
++|+|||||++|+++|..| . +.+|+|+|+++.++..... + + . .......+++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~---~-----------------~--~-~~~~~~~~~~ 58 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL---P-----------------H--V-AIGVRDVDEL 58 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS---C-----------------C--C-CSSCCCCCCE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch---h-----------------h--c-ccCCcCHHHH
Confidence 5899999999999999999 4 7899999998755321110 0 0 0 0111222333
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
..++...++++++ .+..+ +|+.++.. . ..|++.++. +...++.||+||+|||. .|
T Consensus 59 ~~~~~~~~~~~gv--~~~~~-~v~~i~~~----------------~--~~V~~~~g~-~~~~~~~~d~lViAtG~---~~ 113 (409)
T 3h8l_A 59 KVDLSEALPEKGI--QFQEG-TVEKIDAK----------------S--SMVYYTKPD-GSMAEEEYDYVIVGIGA---HL 113 (409)
T ss_dssp EEEHHHHTGGGTC--EEEEC-EEEEEETT----------------T--TEEEEECTT-SCEEEEECSEEEECCCC---EE
T ss_pred HHHHHHHHhhCCe--EEEEe-eEEEEeCC----------------C--CEEEEccCC-cccceeeCCEEEECCCC---Cc
Confidence 4556666677787 66665 89988862 1 157777654 23346899999999994 67
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCC-------------------C------CHHHHHH
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFK-------------------K------SAIDLAK 214 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G-------------------~------sg~d~a~ 214 (511)
+.|.+| |.+. ...+...+..............++++|||+| . .++|+|.
T Consensus 114 ~~~~ip---G~~~---~~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~ 187 (409)
T 3h8l_A 114 ATELVK---GWDK---YGYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSL 187 (409)
T ss_dssp CGGGSB---THHH---HCEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHH
T ss_pred CccCCC---Chhh---cCcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHH
Confidence 777777 6553 2333333332110000000112567799999 2 2788887
Q ss_pred HHHHhcCCC---CCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHH
Q 010421 215 ECAESNQGP---EGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIES 291 (511)
Q Consensus 215 ~l~~~~~~~---~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (511)
.++...... ...+|+++.+.+ ++|... ..+
T Consensus 188 ~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~-----------~~~---------------------------------- 220 (409)
T 3h8l_A 188 MLHGYFKKKGMLDKVHVTVFSPGE--YLSDLS-----------PNS---------------------------------- 220 (409)
T ss_dssp HHHHHHHTTTCTTTEEEEEECSSS--SSTTBC-----------HHH----------------------------------
T ss_pred HHHHHHHHcCCCCCeEEEEEeCCc--cccccC-----------HHH----------------------------------
Confidence 665431110 012589998876 333321 000
Q ss_pred HHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcCCceeeccEEEEecCCC
Q 010421 292 YLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFEDNTKLEADVVILCTGYD 370 (511)
Q Consensus 292 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~dG~~~~~D~VI~aTG~~ 370 (511)
.+.+.+.+++.+|+++.+. |.++++++|+++||+++++|.||+|||++
T Consensus 221 -------------------------------~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 221 -------------------------------RKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp -------------------------------HHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEE
T ss_pred -------------------------------HHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCC
Confidence 0011133455578888865 89999999999999999999999999999
Q ss_pred CcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc---chhhhhHHHHHHHHHHHhcCCC
Q 010421 371 GKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES---VSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~---~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
++..+.+ .+. ++ .+.++.+.+...+..+++||+|++|.... +.....++.||+.+|+.+.+.+
T Consensus 270 ~~~~l~~-~~~---~l-~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 270 GNPALKN-STP---DL-VDDGGFIPTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CCHHHHT-SCG---GG-SCTTSCBCBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHh-ccc---cC-cCCCCCEEeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 8743221 111 11 23445566666666678999999998764 3345789999999999886543
No 76
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.91 E-value=3.1e-24 Score=222.67 Aligned_cols=305 Identities=18% Similarity=0.202 Sum_probs=184.7
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC-------C--CcCccccCC-CcCceeccCCCCc----cccCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS-------D--SIGGIWKSC-SYNSTKLQSHRSD----YEFTDFPWP 66 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~-------~--~~GG~w~~~-~~~~~~~~~~~~~----~~~~~~~~~ 66 (511)
+.+||+|||||++|+++|..| .|++|+|+|+. . .+||+|... ..|...+..+... .....+.++
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 358999999999999999999 89999999942 1 389988651 1221111000000 001111111
Q ss_pred CCCCCCCCChHHHHHHHHHHHHhc-----------CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC
Q 010421 67 NRDDPGFPSYTEILDYLESYAKHF-----------DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH 135 (511)
Q Consensus 67 ~~~~~~~~~~~~~~~yl~~~~~~~-----------~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (511)
.. ........++.++...+.+.+ ++ .+ +..++..++ ... +.+...
T Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~-~~g~a~~~~------------------~~~--v~v~~~ 143 (483)
T 3dgh_A 88 VD-DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKV--EY-INGLGSFVD------------------SHT--LLAKLK 143 (483)
T ss_dssp CC-CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECSEEEEEE------------------TTE--EEEECT
T ss_pred cC-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEeEEEEcc------------------CCE--EEEEeC
Confidence 11 122345566666655554432 22 12 222333222 222 333332
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHH
Q 010421 136 NSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKE 215 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~ 215 (511)
+ +. .++.||+||+||| +.|..|.+| |.+.+ .+++.++..+ ...+++|+|||+|.+|+|+|..
T Consensus 144 ~-g~-~~~~~d~lviATG---s~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~ 205 (483)
T 3dgh_A 144 S-GE-RTITAQTFVIAVG---GRPRYPDIP---GAVEY---GITSDDLFSL-------DREPGKTLVVGAGYIGLECAGF 205 (483)
T ss_dssp T-CC-EEEEEEEEEECCC---EEECCCSST---THHHH---CBCHHHHTTC-------SSCCCEEEEECCSHHHHHHHHH
T ss_pred C-Ce-EEEEcCEEEEeCC---CCcCCCCCC---Ccccc---cCcHHHHhhh-------hhcCCcEEEECCCHHHHHHHHH
Confidence 2 22 3789999999999 468888888 65432 3455554432 2357899999999999999999
Q ss_pred HHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhc
Q 010421 216 CAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLW 295 (511)
Q Consensus 216 l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (511)
+++.+.+ |+++.|.. ++|..+ . ..
T Consensus 206 l~~~g~~-----Vtlv~~~~--~l~~~d-------~----~~-------------------------------------- 229 (483)
T 3dgh_A 206 LKGLGYE-----PTVMVRSI--VLRGFD-------Q----QM-------------------------------------- 229 (483)
T ss_dssp HHHTTCE-----EEEEESSC--SSTTSC-------H----HH--------------------------------------
T ss_pred HHHcCCE-----EEEEeCCC--CCcccC-------H----HH--------------------------------------
Confidence 9998764 99998843 333221 0 00
Q ss_pred cCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc---EEEcCCc-----eeeccEEE
Q 010421 296 KLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG---LEFEDNT-----KLEADVVI 364 (511)
Q Consensus 296 ~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~---v~~~dG~-----~~~~D~VI 364 (511)
.+.+.+.+++.+|+++.+. +.+++. ++ |++.++. ++++|.||
T Consensus 230 ---------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi 282 (483)
T 3dgh_A 230 ---------------------------AELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVL 282 (483)
T ss_dssp ---------------------------HHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEE
T ss_pred ---------------------------HHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEE
Confidence 0011123445567777764 666653 33 6676664 68999999
Q ss_pred EecCCCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecc-c-chhhhhHHHHHHHHHHHhcCC
Q 010421 365 LCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIE-S-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 365 ~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~-~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
+|||++|+..++.+ .-.++..++ +.+.+...+ .++.||+|++|... . +...+.+..|++.+|..+.|.
T Consensus 283 ~a~G~~p~~~~l~l---~~~gl~~~~-G~i~vd~~~-~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 283 WAIGRKGLVDDLNL---PNAGVTVQK-DKIPVDSQE-ATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp ECSCEEECCGGGTG---GGTTCCCBT-TBBCCCTTC-BCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ECcccccCcCcCCc---hhcCccccC-CEEEECcCC-ccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 99999998765321 111111123 445554443 46789999999875 2 445678999999999998765
No 77
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.91 E-value=5.2e-25 Score=225.49 Aligned_cols=167 Identities=21% Similarity=0.275 Sum_probs=116.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
+.++|+|||||++|+++|..| .|++|+|||+.+.+||.|.+ ..| .+....++.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~-gip------------------------~~~~~~~~~ 175 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVY-GIP------------------------GFKLEKSVV 175 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHH-TSC------------------------TTTSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeee-cCC------------------------CccCCHHHH
Confidence 357999999999999999999 89999999999999998865 221 111224667
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
++..++++++++ .+++++.|. . .|++.+. .+.||+||+|||.. .|+
T Consensus 176 ~~~~~~l~~~gv--~~~~~~~v~---~---------------------~v~~~~~------~~~~d~vvlAtG~~--~~~ 221 (456)
T 2vdc_G 176 ERRVKLLADAGV--IYHPNFEVG---R---------------------DASLPEL------RRKHVAVLVATGVY--KAR 221 (456)
T ss_dssp HHHHHHHHHTTC--EEETTCCBT---T---------------------TBCHHHH------HSSCSEEEECCCCC--EEC
T ss_pred HHHHHHHHHCCc--EEEeCCEec---c---------------------EEEhhHh------HhhCCEEEEecCCC--CCC
Confidence 777778888887 677776542 0 1222222 34699999999964 466
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchh---hh--------hhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEE
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKE---AA--------SQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCT 229 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~---~~--------~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vt 229 (511)
.+.+| |.+ ..| ++++.+|...... .. .....+|+|+|||+|.+|+|+|..+.+.+. ++|+
T Consensus 222 ~~~ip---G~~-~~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga----~~Vt 292 (456)
T 2vdc_G 222 DIKAP---GSG-LGN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA----TSVK 292 (456)
T ss_dssp CTTCS---CCT-TTT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC----SEEE
T ss_pred CCCCC---CCc-CCC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC----CEEE
Confidence 77777 644 222 4444333110000 00 012578999999999999999999988864 3599
Q ss_pred EEEecCce
Q 010421 230 MIVRTTHW 237 (511)
Q Consensus 230 l~~R~~~~ 237 (511)
++.|++..
T Consensus 293 iv~r~~~~ 300 (456)
T 2vdc_G 293 CLYRRDRK 300 (456)
T ss_dssp EECSSCST
T ss_pred EEEeCCcc
Confidence 99998764
No 78
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.91 E-value=7.2e-24 Score=225.73 Aligned_cols=311 Identities=18% Similarity=0.183 Sum_probs=181.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC-C-------CcCccccC-CCcCceeccCCCC----ccccCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS-D-------SIGGIWKS-CSYNSTKLQSHRS----DYEFTDFPWPN 67 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~-~-------~~GG~w~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 67 (511)
..+||+|||||++|++||..| .|++|+|||+. + .+||+|.. ..+|...+..... ......+.+..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 357999999999999999999 89999999973 2 37777643 1222221110000 00011111110
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcCCC-------CceE-eeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCc
Q 010421 68 RDDPGFPSYTEILDYLESYAKHFDVF-------KCVR-FNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNS 139 (511)
Q Consensus 68 ~~~~~~~~~~~~~~yl~~~~~~~~~~-------~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (511)
..........++.+|++.+++++... ..+. ....+..++ .|.+.+.+.+ ++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~--------------------~~~v~v~~~~-g~ 244 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLIS--------------------PHEVQITDKN-QK 244 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--------------------TTEEEEECTT-CC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcC--------------------CCEEEEEeCC-CC
Confidence 00012345677777777665542110 0111 112222222 2346655432 33
Q ss_pred eeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHh
Q 010421 140 IQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAES 219 (511)
Q Consensus 140 ~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~ 219 (511)
..++.||+||+|||+ .|+.|++| |.+.+ .+++.++... ...+++|+|||+|.+|+|+|..|++.
T Consensus 245 ~~~~~~d~lviAtGs---~p~~p~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~~ 308 (598)
T 2x8g_A 245 VSTITGNKIILATGE---RPKYPEIP---GAVEY---GITSDDLFSL-------PYFPGKTLVIGASYVALECAGFLASL 308 (598)
T ss_dssp EEEEEEEEEEECCCE---EECCCSST---THHHH---CEEHHHHTTC-------SSCCCSEEEECCSHHHHHHHHHHHHT
T ss_pred eEEEEeCEEEEeCCC---CCCCCCCC---Ccccc---eEcHHHHhhC-------ccCCCEEEEECCCHHHHHHHHHHHHc
Confidence 346899999999994 68888888 65432 3455444332 24578999999999999999999998
Q ss_pred cCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCc
Q 010421 220 NQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPL 299 (511)
Q Consensus 220 ~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (511)
+.+ ||++.|+ .++|..+ . .. ...
T Consensus 309 g~~-----Vtlv~~~--~~l~~~d-------~----~~----------------------------~~~----------- 331 (598)
T 2x8g_A 309 GGD-----VTVMVRS--ILLRGFD-------Q----QM----------------------------AEK----------- 331 (598)
T ss_dssp TCC-----EEEEESS--CSSTTSC-------H----HH----------------------------HHH-----------
T ss_pred CCE-----EEEEECC--cCcCcCC-------H----HH----------------------------HHH-----------
Confidence 765 9999987 2333321 0 00 000
Q ss_pred ccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEe--------C---CcEE----EcCCceee--cc
Q 010421 300 LKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFW--------K---GGLE----FEDNTKLE--AD 361 (511)
Q Consensus 300 ~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~--------~---~~v~----~~dG~~~~--~D 361 (511)
+.+.+++.+|+++.+. +.+++ + +++. +.+|++++ +|
T Consensus 332 --------------------------~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D 385 (598)
T 2x8g_A 332 --------------------------VGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFE 385 (598)
T ss_dssp --------------------------HHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEES
T ss_pred --------------------------HHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCC
Confidence 0112333445555542 33331 1 2232 35787654 99
Q ss_pred EEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecc-c-chhhhhHHHHHHHHHHHhcCC
Q 010421 362 VVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIE-S-VSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 362 ~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~-~-~~~~~~~e~qa~~~a~~l~g~ 437 (511)
.||+|||++++..++. ....++..++.+.+.+...+ .++.|++|++|... . +...+.+..|++.+|..+.+.
T Consensus 386 ~vi~a~G~~p~~~~l~---~~~~gl~~~~~G~i~vd~~~-~ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 386 TVIFAVGREPQLSKVL---CETVGVKLDKNGRVVCTDDE-QTTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp EEEECSCEEECGGGTB---CGGGCCCBCTTSCBCCCTTS-BCSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCccccCccC---chhcCceECCCCcEEeCCCC-cCCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 9999999999876421 01111112334445554443 46789999999873 3 335678999999999988653
No 79
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.90 E-value=6.4e-25 Score=237.06 Aligned_cols=268 Identities=20% Similarity=0.189 Sum_probs=188.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
..+||+|||||++|+++|..| .|++|+|||+++.+||.|... .+ +.+....++
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~------------------------p~~~~~~~~ 445 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESAL------------------------PGLSAWGRV 445 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTS------------------------TTCGGGGHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCC------------------------CchhHHHHH
Confidence 357999999999999999999 899999999999999987651 11 222345678
Q ss_pred HHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 80 LDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 80 ~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
.+|+...++++ ++ .++++++|+ ..+. .++.+|+||+|||... .
T Consensus 446 ~~~~~~~~~~~~gv--~~~~~~~v~----------------------------~~~~-----~~~~~d~lvlAtG~~~-~ 489 (690)
T 3k30_A 446 KEYREAVLAELPNV--EIYRESPMT----------------------------GDDI-----VEFGFEHVITATGATW-R 489 (690)
T ss_dssp HHHHHHHHHTCTTE--EEESSCCCC----------------------------HHHH-----HHTTCCEEEECCCEEE-C
T ss_pred HHHHHHHHHHcCCC--EEEECCeec----------------------------HHHH-----hhcCCCEEEEcCCCcc-c
Confidence 88888888876 55 455443321 1111 1567999999999752 2
Q ss_pred ------CCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEEC--CCCCHHHHHHHHHHhcCCCCCCcEEE
Q 010421 159 ------PIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVG--FKKSAIDLAKECAESNQGPEGQPCTM 230 (511)
Q Consensus 159 ------p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG--~G~sg~d~a~~l~~~~~~~~~~~Vtl 230 (511)
|..|.+| |.+. ..++++.++.. .....+++|+||| +|.+|+|+|..|++.+.+ |++
T Consensus 490 ~~~~~~~~~~~i~---G~~~--~~v~~~~~~l~------~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~-----Vtl 553 (690)
T 3k30_A 490 TDGVARFHTTALP---IAEG--MQVLGPDDLFA------GRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE-----VSI 553 (690)
T ss_dssp SSCCSSSCSSCCC---BCTT--SEEECHHHHHT------TCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE-----EEE
T ss_pred cccccccCCCCCC---CCCC--CcEEcHHHHhC------CCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe-----eEE
Confidence 5567777 5542 35677666543 2345788999999 999999999999998754 999
Q ss_pred EEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCcc
Q 010421 231 IVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPF 310 (511)
Q Consensus 231 ~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~ 310 (511)
+.+.+.. .+... + .
T Consensus 554 v~~~~~l-~~~~~----~------~------------------------------------------------------- 567 (690)
T 3k30_A 554 VTPGAQV-SSWTN----N------T------------------------------------------------------- 567 (690)
T ss_dssp EESSSST-TGGGG----G------G-------------------------------------------------------
T ss_pred Eeccccc-ccccc----c------c-------------------------------------------------------
Confidence 9987642 11100 0 0
Q ss_pred ccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEc-----CCceeeccEEEEecCCCCcccccccCCCccc
Q 010421 311 EEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFE-----DNTKLEADVVILCTGYDGKKKLKAFLPEPFQ 384 (511)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~-----dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~ 384 (511)
.....+.+.+++.+|+++.+. |.+++++++.+. +++++++|.||+|||++++..+...+..
T Consensus 568 ----------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l~~--- 634 (690)
T 3k30_A 568 ----------FEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVA--- 634 (690)
T ss_dssp ----------TCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHHHH---
T ss_pred ----------hhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHHhh---
Confidence 000112244566678888875 888988886654 4556999999999999998764321100
Q ss_pred ccccCCCCcccceeeecCCCCCceEEEeecccchhhhhHHHHHHHHHHHhcCCCC
Q 010421 385 SLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLSRLIDDKFK 439 (511)
Q Consensus 385 ~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a~~l~g~~~ 439 (511)
. .. .++.||+|++|....+..+..+..|++.+|..+.+.+.
T Consensus 635 ------~----~~----~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 635 ------R----RD----AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp ------H----HH----HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCC
T ss_pred ------h----hc----ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhcc
Confidence 0 00 46789999999887766677799999999999987643
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.90 E-value=6.6e-24 Score=217.61 Aligned_cols=171 Identities=20% Similarity=0.216 Sum_probs=114.8
Q ss_pred CCCeEEEECCCHHHHHHHHhc-c--------CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL-R--------HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGF 73 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l-~--------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (511)
+.++|+|||||++|+++|..| . +.+|+|||+.+.+||.|.+... +.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~------------------------p~~ 57 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA------------------------PDH 57 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC------------------------TTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC------------------------CCC
Confidence 357999999999999999999 6 8999999999889998865111 223
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeec
Q 010421 74 PSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTG 153 (511)
Q Consensus 74 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG 153 (511)
+...++..++..+++++++ .++.+.+| . . .|++.++ .+.||+||+|||
T Consensus 58 ~~~~~~~~~~~~~~~~~~v--~~~~~v~v---~------------------~---~v~~~~~------~~~~d~lViAtG 105 (456)
T 1lqt_A 58 PKIKSISKQFEKTAEDPRF--RFFGNVVV---G------------------E---HVQPGEL------SERYDAVIYAVG 105 (456)
T ss_dssp TGGGGGHHHHHHHHTSTTE--EEEESCCB---T------------------T---TBCHHHH------HHHSSEEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCC--EEEeeEEE---C------------------C---EEEECCC------eEeCCEEEEeeC
Confidence 3455677888888877665 44444221 1 0 1333332 468999999999
Q ss_pred ccCCCCCCCCCCCCCCCCcccceEEeccccCc----c-chhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcC-------
Q 010421 154 KYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCK----L-DKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQ------- 221 (511)
Q Consensus 154 ~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~----~-~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~------- 221 (511)
+. .|+.|.+| |.+ +.| ++++.++.. . +.......+.+++|+|||+|.+|+|+|..|++...
T Consensus 106 ~~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi 178 (456)
T 1lqt_A 106 AQ--SDRMLNIP---GED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDI 178 (456)
T ss_dssp CC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCC
T ss_pred CC--CCCCCCCC---CCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCc
Confidence 63 36677788 655 344 666655410 0 00000112478999999999999999999987410
Q ss_pred ---------CCCCCcEEEEEecCc
Q 010421 222 ---------GPEGQPCTMIVRTTH 236 (511)
Q Consensus 222 ---------~~~~~~Vtl~~R~~~ 236 (511)
....++|+++.|++.
T Consensus 179 ~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 179 ADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CHHHHHHHTTCCCCEEEEECSSCG
T ss_pred cHHHHHHHHHCCCcEEEEEecCCh
Confidence 000246999999875
No 81
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.90 E-value=4.2e-24 Score=221.59 Aligned_cols=307 Identities=13% Similarity=0.137 Sum_probs=181.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
+++|||||||++|+.+|+.| .+++|+|+|+++.. .|..+ +++.. .......++..
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-------~~~Pl-------L~~va---------~G~l~~~~i~~ 98 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-------LFTPL-------LPSAP---------VGTVDEKSIIE 98 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-------ECGGG-------GGGTT---------TTSSCGGGGEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-------ccccc-------hhHHh---------hccccHHHhhh
Confidence 46899999999999999999 78999999998643 11100 00000 00111111111
Q ss_pred HHHHHHHhcCCCCceE-eeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC---------------CCCceeEEEe
Q 010421 82 YLESYAKHFDVFKCVR-FNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH---------------NSNSIQRYGF 145 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~-~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------------~~~~~~~~~~ 145 (511)
.+..+..... ..+. ...+|++|+.. .. +|++++. ..+...++.|
T Consensus 99 p~~~~~~~~~--~~v~~~~~~v~~ID~~----------------~k--~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~Y 158 (502)
T 4g6h_A 99 PIVNFALKKK--GNVTYYEAEATSINPD----------------RN--TVTIKSLSAVSQLYQPENHLGLHQAEPAEIKY 158 (502)
T ss_dssp EHHHHHTTCS--SCEEEEEEEEEEEEGG----------------GT--EEEEEEEEEEEECSSSCCCCCCCTTCCEEEEC
T ss_pred hHHHHHHhhc--CCeEEEEEEEEEEEhh----------------hC--EEEEeecccceeecccccccccccCCceEEeC
Confidence 1222221111 1233 35688898873 11 3444331 0122347999
Q ss_pred CEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccch---------hhh-------hhccCCCcEEEECCCCCH
Q 010421 146 EFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDK---------EAA-------SQLLKDKKVAVVGFKKSA 209 (511)
Q Consensus 146 d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~---------~~~-------~~~~~~k~V~VvG~G~sg 209 (511)
|+|||||| +.|+.+++| |.+... +......+... +.. +......+++|||+|.+|
T Consensus 159 D~LViAtG---s~~~~~~ip---G~~e~a---~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tG 229 (502)
T 4g6h_A 159 DYLISAVG---AEPNTFGIP---GVTDYG---HFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTG 229 (502)
T ss_dssp SEEEECCC---CEECCTTCT---THHHHC---EECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHH
T ss_pred CEEEEcCC---cccccCCcc---Cccccc---CCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcch
Confidence 99999999 567888888 654321 11111100000 000 011123479999999999
Q ss_pred HHHHHHHHHhcCC---------CCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhh
Q 010421 210 IDLAKECAESNQG---------PEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSP 280 (511)
Q Consensus 210 ~d~a~~l~~~~~~---------~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 280 (511)
+|+|.+|++.... ....+|+++.+.+. ++|..+ .+..
T Consensus 230 vE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~-----------~~~~---------------------- 275 (502)
T 4g6h_A 230 VEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFE-----------KKLS---------------------- 275 (502)
T ss_dssp HHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSC-----------HHHH----------------------
T ss_pred hhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCC-----------HHHH----------------------
Confidence 9999998864310 00124899988876 444432 0000
Q ss_pred hHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEE----cCC
Q 010421 281 LRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEF----EDN 355 (511)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~----~dG 355 (511)
+...+.+++.+|+++.+. |.+++++++.+ +||
T Consensus 276 -------------------------------------------~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg 312 (502)
T 4g6h_A 276 -------------------------------------------SYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDG 312 (502)
T ss_dssp -------------------------------------------HHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTS
T ss_pred -------------------------------------------HHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCc
Confidence 011134556678888876 88899888655 355
Q ss_pred c----eeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeeccc---chhhhhHHHHHH
Q 010421 356 T----KLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIES---VSNLHTAELRSI 428 (511)
Q Consensus 356 ~----~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~---~~~~~~~e~qa~ 428 (511)
+ ++++|.||||||.+++....+ +... .+...+..+.+.+...+..+++||+|++|.+.. +.+.+.|..||+
T Consensus 313 ~~~~~~i~ad~viwa~Gv~~~~~~~~-l~~~-~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~ 390 (502)
T 4g6h_A 313 KITEETIPYGTLIWATGNKARPVITD-LFKK-IPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAE 390 (502)
T ss_dssp CEEEEEEECSEEEECCCEECCHHHHH-HHHH-SGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHH
T ss_pred ccceeeeccCEEEEccCCcCCHHHHh-HHHh-ccccccCCCceeECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHH
Confidence 4 589999999999998742211 1000 011123445566777677789999999997653 234578999999
Q ss_pred HHHHHhcCCCCCC
Q 010421 429 WLSRLIDDKFKLP 441 (511)
Q Consensus 429 ~~a~~l~g~~~lp 441 (511)
++|+.|.+..+.+
T Consensus 391 ~~A~ni~~~~~~~ 403 (502)
T 4g6h_A 391 YLAKNFDKMAQIP 403 (502)
T ss_dssp HHHHHHHHHTTCH
T ss_pred HHHHHHHHHhccc
Confidence 9999997655433
No 82
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.90 E-value=5.4e-24 Score=218.01 Aligned_cols=299 Identities=14% Similarity=0.156 Sum_probs=188.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc-c----CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL-R----HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPS 75 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l-~----g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (511)
|+..++|+|||||++|+++|..| . +++|+|+|+++... |..... .+ ......
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~~~~-------~~---------~~g~~~ 57 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVPSNP-------WV---------GVGWKE 57 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGGGHH-------HH---------HHTSSC
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccCCcc-------cc---------ccCccC
Confidence 66668999999999999999999 4 78999999987541 100000 00 012234
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+++..++..++++.++ .+. ..+|+.++.. +. +|++.++. ++.||+||+|||
T Consensus 58 ~~~~~~~l~~~~~~~gv--~~~-~~~v~~id~~----------------~~--~V~~~~g~-----~i~~d~lviAtG-- 109 (437)
T 3sx6_A 58 RDDIAFPIRHYVERKGI--HFI-AQSAEQIDAE----------------AQ--NITLADGN-----TVHYDYLMIATG-- 109 (437)
T ss_dssp HHHHEEECHHHHHTTTC--EEE-CSCEEEEETT----------------TT--EEEETTSC-----EEECSEEEECCC--
T ss_pred HHHHHHHHHHHHHHCCC--EEE-EeEEEEEEcC----------------CC--EEEECCCC-----EEECCEEEECCC--
Confidence 55666667777777777 554 5689998862 11 57666553 799999999999
Q ss_pred CCCCCCCCCCCCCCCCcccceEEeccccCccchhh--hhhccCCCcEEEECCCCCH------HHHHHHHHHh----cCCC
Q 010421 156 GDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEA--ASQLLKDKKVAVVGFKKSA------IDLAKECAES----NQGP 223 (511)
Q Consensus 156 ~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~--~~~~~~~k~V~VvG~G~sg------~d~a~~l~~~----~~~~ 223 (511)
..|+.|.+| |.+.+.+...+...+.+..... ......+++++|||+|.+| +|+|..++.. +...
T Consensus 110 -~~~~~~~ip---G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~ 185 (437)
T 3sx6_A 110 -PKLAFENVP---GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRD 185 (437)
T ss_dssp -CEECGGGST---TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGG
T ss_pred -CCcCcccCC---CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcc
Confidence 467778888 6654434343333332211000 0011225678899996654 8988666543 2210
Q ss_pred CCCc-EEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccC
Q 010421 224 EGQP-CTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKY 302 (511)
Q Consensus 224 ~~~~-Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (511)
..+ |+++.+.+.. .+... .+.+
T Consensus 186 -~~~~Vtlv~~~~~~-~~~~l-~~~~------------------------------------------------------ 208 (437)
T 3sx6_A 186 -KIPSFTFITSEPYI-GHLGI-QGVG------------------------------------------------------ 208 (437)
T ss_dssp -GCSCEEEEESSSST-TCTTT-TCCT------------------------------------------------------
T ss_pred -cCcEEEEEcCCccc-ccccc-Ccch------------------------------------------------------
Confidence 012 9999987641 11000 0000
Q ss_pred CCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcC---------CceeeccEEEEecCCCCc
Q 010421 303 GLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFED---------NTKLEADVVILCTGYDGK 372 (511)
Q Consensus 303 ~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~d---------G~~~~~D~VI~aTG~~~~ 372 (511)
...+.+.+.+++.+|+++.+. +.+++++++++++ ++++++|.||+|+|+.++
T Consensus 209 ------------------~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~ 270 (437)
T 3sx6_A 209 ------------------DSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGV 270 (437)
T ss_dssp ------------------THHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECC
T ss_pred ------------------HHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCc
Confidence 000111234566678888775 8889988887765 667999999999999987
Q ss_pred ccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc-------------hhhhhHHHHHHHHHHHhc
Q 010421 373 KKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV-------------SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~-------------~~~~~~e~qa~~~a~~l~ 435 (511)
..+.+. .++ .++.+.+.+...+..+++||+|++|..... .+...+..|++.+|..|.
T Consensus 271 ~~~~~~-----~gl-~~~~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~ 340 (437)
T 3sx6_A 271 PAVAGV-----EGL-CNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIK 340 (437)
T ss_dssp HHHHTS-----TTT-BCTTSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hhhhcc-----ccc-cCCCCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 554321 112 245566777776666789999999976542 234578899998888764
No 83
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.89 E-value=7.1e-23 Score=213.01 Aligned_cols=307 Identities=17% Similarity=0.128 Sum_probs=178.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCC--------CCcCccccCC-CcCceeccCCCCccc-----cCCCCCCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS--------DSIGGIWKSC-SYNSTKLQSHRSDYE-----FTDFPWPNR 68 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~--------~~~GG~w~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~ 68 (511)
|||+|||||++|+.+|.++ .|.+|+|+|+. ..+||++... +.|.-.+......+. ...+.+..
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~- 121 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF- 121 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc-
Confidence 7999999999999999999 89999999974 3488876541 122111100000000 00010000
Q ss_pred CCCCCCChHHHHHHHHHHH-----------HhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC-C
Q 010421 69 DDPGFPSYTEILDYLESYA-----------KHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH-N 136 (511)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~-----------~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~ 136 (511)
...-.....+.++.+.+. ++.++ .+. .....-+. .. +|.+... .
T Consensus 122 -~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V--~~i-~G~a~f~~------------------~~--~v~V~~~~~ 177 (542)
T 4b1b_A 122 -DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV--KYI-NGLAKLKD------------------KN--TVSYYLKGD 177 (542)
T ss_dssp -EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CEEEEEEE------------------TT--EEEEEEC--
T ss_pred -CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-eeeEEEcC------------------CC--cceEeeccc
Confidence 000112334444433332 22333 222 22222111 11 3444322 1
Q ss_pred CCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHH
Q 010421 137 SNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKEC 216 (511)
Q Consensus 137 ~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l 216 (511)
.+..+++.+|++||||| +.|.+|+.+ +.. ...++.|.+...+. ..+++++|||+|.+|+|+|..+
T Consensus 178 ~~~~~~i~a~~iiIATG---s~P~~P~~~---~~~--~~~~~ts~~~l~l~-------~lP~~lvIIGgG~IGlE~A~~~ 242 (542)
T 4b1b_A 178 LSKEETVTGKYILIATG---CRPHIPDDV---EGA--KELSITSDDIFSLK-------KDPGKTLVVGASYVALECSGFL 242 (542)
T ss_dssp CCCEEEEEEEEEEECCC---EEECCCSSS---BTH--HHHCBCHHHHTTCS-------SCCCSEEEECCSHHHHHHHHHH
T ss_pred CCceEEEeeeeEEeccC---CCCCCCCcc---cCC--CccccCchhhhccc-------cCCceEEEECCCHHHHHHHHHH
Confidence 23344799999999999 468887543 221 11245555554432 4578999999999999999999
Q ss_pred HHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhcc
Q 010421 217 AESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWK 296 (511)
Q Consensus 217 ~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (511)
++.+.+ ||++.|+. ++|..+ . .. ..
T Consensus 243 ~~lG~~-----VTii~~~~--~L~~~D-------~----ei----------------------------~~--------- 267 (542)
T 4b1b_A 243 NSLGYD-----VTVAVRSI--VLRGFD-------Q----QC----------------------------AV--------- 267 (542)
T ss_dssp HHHTCC-----EEEEESSC--SSTTSC-------H----HH----------------------------HH---------
T ss_pred HhcCCe-----EEEecccc--cccccc-------h----hH----------------------------HH---------
Confidence 999876 99998753 345433 0 00 00
Q ss_pred CCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeC--Cc--EEEcCCceeeccEEEEecCCCC
Q 010421 297 LPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWK--GG--LEFEDNTKLEADVVILCTGYDG 371 (511)
Q Consensus 297 ~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~~--v~~~dG~~~~~D~VI~aTG~~~ 371 (511)
.+.+.+++.+|+++.+. +.+++. ++ |.+.++.++++|.|++|||.+|
T Consensus 268 ----------------------------~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 268 ----------------------------KVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp ----------------------------HHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred ----------------------------HHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccC
Confidence 11123445556777664 555543 22 5677888899999999999999
Q ss_pred cccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccc--hhhhhHHHHHHHHHHHhcCC
Q 010421 372 KKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESV--SNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~--~~~~~~e~qa~~~a~~l~g~ 437 (511)
+...+. .+..++..+..+....-.....++.||+|++|..... ...+.+..|++.++..+.|.
T Consensus 320 nt~~L~---le~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 320 DIDGLN---LESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp SCGGGC---GGGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred CccccC---cccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhcC
Confidence 976432 1111111122222212222345778999999987643 34578999999999988663
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.88 E-value=1.2e-23 Score=218.37 Aligned_cols=314 Identities=11% Similarity=0.070 Sum_probs=177.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc----cCCCcEEEcCCCCcCccccCCCcCceeccCCC-----CccccCCCCCCCC---
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL----RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHR-----SDYEFTDFPWPNR--- 68 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--- 68 (511)
|+..+||+|||||++|++||..| .+.+|+|||+++.++. .. ..++..+.... ..+.|.+++....
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r-~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MR-PPLSKELWFSDDPNVTKTLRFKQWNGKERSIY 84 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CS-GGGGTGGGCC--CTHHHHCEEECTTSCEEESB
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CC-CCCCHHhhcCCccchhhccccccccccccccc
Confidence 34568999999999999999988 4889999999876641 11 00000000000 0011111110000
Q ss_pred --CCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeC
Q 010421 69 --DDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFE 146 (511)
Q Consensus 69 --~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d 146 (511)
....+....++.+ ..+.++ .++++++|++++.. .++|++.++. ++.||
T Consensus 85 ~~~~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~------------------~~~V~~~~g~-----~i~yd 134 (493)
T 1m6i_A 85 FQPPSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVR------------------DNMVKLNDGS-----QITYE 134 (493)
T ss_dssp SSCGGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGG------------------GTEEEETTSC-----EEEEE
T ss_pred ccchHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECC------------------CCEEEECCCC-----EEECC
Confidence 0001111111100 122344 67778899999862 1367776554 78999
Q ss_pred EEEEeecccCCCCCCCCCCCCCCCC--cccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCC
Q 010421 147 FLVVCTGKYGDVPIIPAFPNNKGPE--VFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPE 224 (511)
Q Consensus 147 ~vVlAtG~~~~~p~~p~~~~~~g~~--~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~ 224 (511)
+||+|||+ .|+.|.++ +.. .+...+.......+... .......+++|+|||+|.+|+|+|..|++.+.+ .
T Consensus 135 ~lviATGs---~p~~~~~~---~~~~~~~~~~v~~~~~~~d~~~-l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~-~ 206 (493)
T 1m6i_A 135 KCLIATGG---TPRSLSAI---DRAGAEVKSRTTLFRKIGDFRS-LEKISREVKSITIIGGGFLGSELACALGRKARA-L 206 (493)
T ss_dssp EEEECCCE---EECCCHHH---HTSCHHHHHTEEECCSHHHHHH-HHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHH-H
T ss_pred EEEECCCC---CCCCCCCc---ccccccccCceEEEcCHHHHHH-HHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhh-c
Confidence 99999995 56666554 211 11112222222211000 001223589999999999999999999874210 0
Q ss_pred CCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCC
Q 010421 225 GQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGL 304 (511)
Q Consensus 225 ~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 304 (511)
+.+|+++.+.+..+ ++.. | ..+
T Consensus 207 g~~V~~v~~~~~~~-~~~l----~------~~~----------------------------------------------- 228 (493)
T 1m6i_A 207 GTEVIQLFPEKGNM-GKIL----P------EYL----------------------------------------------- 228 (493)
T ss_dssp TCEEEEECSSSSTT-TTTS----C------HHH-----------------------------------------------
T ss_pred CCEEEEEecCcccc-cccC----C------HHH-----------------------------------------------
Confidence 12488888765311 1110 0 000
Q ss_pred CCCCccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCC----cEEEcCCceeeccEEEEecCCCCcccccccC
Q 010421 305 KPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKG----GLEFEDNTKLEADVVILCTGYDGKKKLKAFL 379 (511)
Q Consensus 305 ~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~ 379 (511)
.+.+.+.+++.+|+++.+. |.+++.+ .|+++||+++++|.||+|+|++++..+.+..
T Consensus 229 ------------------~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~ 290 (493)
T 1m6i_A 229 ------------------SNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTG 290 (493)
T ss_dssp ------------------HHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHH
T ss_pred ------------------HHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHc
Confidence 0011234556678888774 7777532 2778899999999999999999997654322
Q ss_pred CCcccccccCC-CCcccceeeecCCCCCceEEEeecccc----------hhhhhHHHHHHHHHHHhcCCC
Q 010421 380 PEPFQSLLEHP-SGLLPLYRGTIHPLIPNMAFVGYIESV----------SNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 380 ~~~~~~~~~~~-~~~~~ly~~~~~~~~pnl~~iG~~~~~----------~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+.+ .++ .+.+.+..++.. .||+|++|.+... ..+..|..|++.+|+.+.|..
T Consensus 291 gl~-----~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~~ 353 (493)
T 1m6i_A 291 GLE-----IDSDFGGFRVNAELQA--RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAA 353 (493)
T ss_dssp TCC-----BCTTTCSEECCTTCEE--ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSCC
T ss_pred CCc-----cccCCCcEEECCCccc--CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCCC
Confidence 211 111 233333333221 4999999976432 124579999999999998753
No 85
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.88 E-value=1.3e-23 Score=227.77 Aligned_cols=277 Identities=17% Similarity=0.172 Sum_probs=179.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-CcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-SYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
.+||+|||||++|+++|..| .|++|+|||+++.+||.|... .+| .+.....+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~p------------------------g~~~~~~~~ 444 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALP------------------------GLGEWSYHR 444 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTST------------------------TCGGGHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCC------------------------ChHHHHHHH
Confidence 47999999999999999999 899999999999999988651 111 111234556
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCC---
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGD--- 157 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~--- 157 (511)
+|++..++.+. ..+..++.+.. + ..|++.++. .+.||+||+|||....
T Consensus 445 ~~~~~~i~~~~-----~~~~~~v~i~~-----------------~--~~v~~~~~~-----~~~~d~vviAtG~~~~~~~ 495 (729)
T 1o94_A 445 DYRETQITKLL-----KKNKESQLALG-----------------Q--KPMTADDVL-----QYGADKVIIATGARWNTDG 495 (729)
T ss_dssp HHHHHHHHHHH-----HHSTTCEEECS-----------------C--CCCCHHHHH-----TSCCSEEEECCCEEECSSC
T ss_pred HHHHHHHHHhh-----cccCCceEEEe-----------------C--eEEehhhcc-----ccCCCEEEEcCCCCccccc
Confidence 67666555431 00111222221 0 013222221 5689999999997521
Q ss_pred --CCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEEC--CCCCHHHHHHHHHHhcCCCCCCcEEEEEe
Q 010421 158 --VPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVG--FKKSAIDLAKECAESNQGPEGQPCTMIVR 233 (511)
Q Consensus 158 --~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG--~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R 233 (511)
.|..|.+| |.+.+.+.++++.++.. .....+++|+||| +|.+|+|+|..|++.+.+ ||++.|
T Consensus 496 ~~~p~~~~ip---G~~~~~~~v~~~~~~l~------~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~-----Vtlv~~ 561 (729)
T 1o94_A 496 TNCLTHDPIP---GADASLPDQLTPEQVMD------GKKKIGKRVVILNADTYFMAPSLAEKLATAGHE-----VTIVSG 561 (729)
T ss_dssp CCTTTSSCCT---TCCTTSTTEECHHHHHH------CCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE-----EEEEES
T ss_pred ccCccCCCCC---CccccCCCEEEHHHHhc------CCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE-----EEEEec
Confidence 15667777 76655556777666533 1335689999999 999999999999998754 999999
Q ss_pred cCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccc
Q 010421 234 TTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEED 313 (511)
Q Consensus 234 ~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~ 313 (511)
++ +.+... .+.
T Consensus 562 ~~--l~~~~~---~~~---------------------------------------------------------------- 572 (729)
T 1o94_A 562 VH--LANYMH---FTL---------------------------------------------------------------- 572 (729)
T ss_dssp SC--TTHHHH---HTT----------------------------------------------------------------
T ss_pred cc--cccccc---ccc----------------------------------------------------------------
Confidence 76 322100 000
Q ss_pred cccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEc----CC-ce------------------eeccEEEEecCC
Q 010421 314 YASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFE----DN-TK------------------LEADVVILCTGY 369 (511)
Q Consensus 314 ~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~----dG-~~------------------~~~D~VI~aTG~ 369 (511)
....+.+.+++.+|+++.+. +.+++++++++. ++ ++ +++|.||+|+|+
T Consensus 573 --------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~ 644 (729)
T 1o94_A 573 --------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR 644 (729)
T ss_dssp --------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE
T ss_pred --------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC
Confidence 00011133445567777764 777777665542 33 22 899999999999
Q ss_pred CCcccccccCCCcccccccCCCCcccceeeecCCCCCceEEEeecccchhhhhHHHHHHHHHHHhcCCC
Q 010421 370 DGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLSRLIDDKF 438 (511)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a~~l~g~~ 438 (511)
+++..+.+-+ .. . +.. ...++.|++|++|....+..+..|..|++.+|..|.+.+
T Consensus 645 ~p~~~l~~~l----~~---~------vd~-~~~t~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 645 HSECTLWNEL----KA---R------ESE-WAENDIKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp EECCHHHHHH----HH---T------GGG-TGGGTCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCChHHHHHH----hh---h------ccc-ccccCCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 9987653211 00 0 001 122567999999988766566779999999999887643
No 86
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.88 E-value=4.9e-23 Score=221.80 Aligned_cols=289 Identities=19% Similarity=0.255 Sum_probs=171.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+.+|..| .|++|+|+|+++.+||.|..... + +......++.+
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~------------------~-----~~~~~~~~~~~ 429 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQ------------------I-----PGKEEFYETLR 429 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTT------------------S-----TTCTTHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeecccc------------------C-----CCHHHHHHHHH
Confidence 57999999999999999999 88999999999999998754100 0 11112345566
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEE-EeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRY-GFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vVlAtG~~~~~p~ 160 (511)
++...++++++ .+++++.|.. . .+ .||+||+|||. .|+
T Consensus 430 ~~~~~~~~~gv--~~~~~~~v~~-------------------------------~-----~~~~~d~lviAtG~---~p~ 468 (671)
T 1ps9_A 430 YYRRMIEVTGV--TLKLNHTVTA-------------------------------D-----QLQAFDETILASGI---VPR 468 (671)
T ss_dssp HHHHHHHHHTC--EEEESCCCCS-------------------------------S-----SSCCSSEEEECCCE---EEC
T ss_pred HHHHHHHHcCC--EEEeCcEecH-------------------------------H-----HhhcCCEEEEccCC---CcC
Confidence 77777778887 6666654310 0 23 79999999994 678
Q ss_pred CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeec
Q 010421 161 IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVP 240 (511)
Q Consensus 161 ~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p 240 (511)
.|.+| |.+. ..++++.++.. .....+++|+|||+|.+|+|+|..|++.+.. |+++... |. +
T Consensus 469 ~~~i~---G~~~--~~v~~~~~~l~------~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~-----vtv~~~~--~~-~ 529 (671)
T 1ps9_A 469 TPPID---GIDH--PKVLSYLDVLR------DKAPVGNKVAIIGCGGIGFDTAMYLSQPGES-----TSQNIAG--FC-N 529 (671)
T ss_dssp CCCCB---TTTS--TTEEEHHHHHT------SCCCCCSEEEEECCHHHHHHHHHHHTCCSSC-----GGGCHHH--HH-H
T ss_pred CCCCC---CCCC--CcEeeHHHHhh------CCCCCCCeEEEECCChhHHHHHHHHHhcCCC-----cccchhh--hh-h
Confidence 88888 6543 24666555432 1235689999999999999999999877643 4431100 00 0
Q ss_pred CcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc-
Q 010421 241 HYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM- 319 (511)
Q Consensus 241 ~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~- 319 (511)
.++..........+... ....... ...+. -+.+....+ +-..
T Consensus 530 ---~~g~~~~~~~~~~~~~~-~~~~~~~-------------------------~~~v~----l~~~~~~~l----~~~l~ 572 (671)
T 1ps9_A 530 ---EWGIDSSLQQAGGLSPQ-GMQIPRS-------------------------PRQIV----MLQRKASKP----GQGLG 572 (671)
T ss_dssp ---HTTBCTTCCSGGGBCTT-CCCCCCC-------------------------SSEEE----EECSSCSCT----TTTSC
T ss_pred ---hhccccccccccccccc-ccccCCC-------------------------CcEEE----EEEecchhh----ccccc
Confidence 00000000000000000 0000000 00000 000000000 0000
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeCCcEEE-cCC--ceeeccEEEEecCCCCcccccccCCCcccccccCCCCccc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEF-EDN--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLP 395 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~-~dG--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (511)
......+.+.+++.+|+++.+. +.+++++++++ .|| +++++|.||+|||++++..+.+. +
T Consensus 573 ~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~-------l--------- 636 (671)
T 1ps9_A 573 KTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQP-------L--------- 636 (671)
T ss_dssp TTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHH-------H---------
T ss_pred cccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHH-------H---------
Confidence 0000112355677789999886 88899888888 688 46999999999999998654320 0
Q ss_pred ceeeecCCCCCceEEEeecccch--hhhhHHHHHHHHHHHh
Q 010421 396 LYRGTIHPLIPNMAFVGYIESVS--NLHTAELRSIWLSRLI 434 (511)
Q Consensus 396 ly~~~~~~~~pnl~~iG~~~~~~--~~~~~e~qa~~~a~~l 434 (511)
. ..-+++|++|...... ....|..|+..+|..|
T Consensus 637 -----~-~~g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 637 -----I-DSGKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp -----H-TTTCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred -----H-hcCCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 0 1126899999776543 3567889999998764
No 87
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.88 E-value=1.1e-22 Score=208.68 Aligned_cols=168 Identities=18% Similarity=0.253 Sum_probs=113.8
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC--CCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH--HNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g--~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
..++|+|||||++|+.+|..| .+ .+|+|||+.+.+||.|..... +.++...+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~------------------------p~~~~~~~ 60 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA------------------------PDHPEVKN 60 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC------------------------TTCGGGGG
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC------------------------CCCccHHH
Confidence 357999999999999999999 56 899999999999988865211 22233456
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+..++..+++++++ .++++++|. . .|++.+. .+.||+||+|||+. .
T Consensus 61 ~~~~~~~~~~~~gv--~~~~~~~v~---~---------------------~V~~~~~------~~~~d~lVlAtGs~--~ 106 (460)
T 1cjc_A 61 VINTFTQTARSDRC--AFYGNVEVG---R---------------------DVTVQEL------QDAYHAVVLSYGAE--D 106 (460)
T ss_dssp HHHHHHHHHTSTTE--EEEBSCCBT---T---------------------TBCHHHH------HHHSSEEEECCCCC--E
T ss_pred HHHHHHHHHHhCCc--EEEeeeEEe---e---------------------EEEeccc------eEEcCEEEEecCcC--C
Confidence 77888888887776 566665441 0 1332221 46799999999963 2
Q ss_pred CCCCCCCCCCCCCcccceEEeccccCcc-----chhhhhhccCCCcEEEECCCCCHHHHHHHHHH---------------
Q 010421 159 PIIPAFPNNKGPEVFEGQVLHSIDYCKL-----DKEAASQLLKDKKVAVVGFKKSAIDLAKECAE--------------- 218 (511)
Q Consensus 159 p~~p~~~~~~g~~~~~g~~~hs~~~~~~-----~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~--------------- 218 (511)
|+.|.+| |.+ ..+ ++++.++... +.........+++|+|||+|.+|+|+|..|++
T Consensus 107 ~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~ 181 (460)
T 1cjc_A 107 HQALDIP---GEE-LPG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAAL 181 (460)
T ss_dssp ECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHH
T ss_pred CCCCCCC---CCC-CCc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHH
Confidence 4677788 654 222 5555444110 00000012368999999999999999999983
Q ss_pred -----hcCCCCCCcEEEEEecCce
Q 010421 219 -----SNQGPEGQPCTMIVRTTHW 237 (511)
Q Consensus 219 -----~~~~~~~~~Vtl~~R~~~~ 237 (511)
.+. ++|+++.|++.+
T Consensus 182 ~~l~~~g~----~~V~lv~r~~~~ 201 (460)
T 1cjc_A 182 GALRQSRV----KTVWIVGRRGPL 201 (460)
T ss_dssp HHHHTCCC----CEEEEECSSCGG
T ss_pred HHHhhCCC----cEEEEEEcCChH
Confidence 222 369999998753
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.87 E-value=3e-22 Score=222.81 Aligned_cols=293 Identities=13% Similarity=0.122 Sum_probs=178.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|++||..| .|++|+|||+++.+||+|.. . +...+ ... ...++..
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i-------------------~~~-~~~~~~~ 185 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI-------------------DGM-DSSAWIE 185 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE-------------------TTE-EHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc-------------------CCC-CHHHHHH
Confidence 47899999999999999999 89999999999999998873 1 10000 001 1334444
Q ss_pred HHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEe-CCCCceeEEEeCEEEEeecccCCCC
Q 010421 82 YLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQT-HNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 82 yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
.+......+ ++ .++.+++|..+.......... ...+.+.+...+ ...+....+.||+||||||+ .|
T Consensus 186 ~~~~~l~~~~~v--~~~~~~~V~~i~~~~~~~~v~-------~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs---~p 253 (965)
T 2gag_A 186 QVTSELAEAEET--THLQRTTVFGSYDANYLIAAQ-------RRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA---HE 253 (965)
T ss_dssp HHHHHHHHSTTE--EEESSEEEEEEETTTEEEEEE-------ECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE---EE
T ss_pred HHHHHHhhcCCc--EEEeCCEEEeeecCCceeeeE-------eecccccccccccCCCCceEEEECCEEEECCCC---cc
Confidence 444444444 55 677888998886410000000 000001111000 00012236899999999995 46
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
+.|.+| |.+. .| ++++........ ......+++|+|||+|.+|+|+|..|++.+.+ |+++.+++...
T Consensus 254 ~~~~ip---G~~~-~g-v~~~~~~~~~l~--~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~-----Vtvv~~~~~~~- 320 (965)
T 2gag_A 254 RPIVFE---NNDR-PG-IMLAGAVRSYLN--RYGVRAGARIAVATTNDSAYELVRELAATGGV-----VAVIDARSSIS- 320 (965)
T ss_dssp CCCCCB---TCCS-TT-EEEHHHHHHHHH--TTCEESCSSEEEEESSTTHHHHHHHHGGGTCC-----SEEEESCSSCC-
T ss_pred CCCCCC---CCCC-CC-EEEhHHHHHHHH--hcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc-----EEEEECCCccc-
Confidence 777788 5442 22 555543321100 01234679999999999999999999988764 99999976410
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
+ .
T Consensus 321 ~---------------~--------------------------------------------------------------- 322 (965)
T 2gag_A 321 A---------------A--------------------------------------------------------------- 322 (965)
T ss_dssp H---------------H---------------------------------------------------------------
T ss_pred h---------------h---------------------------------------------------------------
Confidence 0 0
Q ss_pred cccCCchhhhhccCeEEEEeCc-eeEEeC--C----cEEEcC-------C--ceeeccEEEEecCCCCcccccccCCCcc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRAS-KWWFWK--G----GLEFED-------N--TKLEADVVILCTGYDGKKKLKAFLPEPF 383 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~-i~~~~~--~----~v~~~d-------G--~~~~~D~VI~aTG~~~~~~~~~~~~~~~ 383 (511)
.+.+++.+|+++.+. +.++++ + +|++.+ | +++++|.||+|+|++|+..+......
T Consensus 323 -------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~g-- 393 (965)
T 2gag_A 323 -------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQG-- 393 (965)
T ss_dssp -------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTTC--
T ss_pred -------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCCC--
Confidence 012334456666664 666654 2 466764 5 56999999999999999765431110
Q ss_pred cccccCCCCcccceeeecCCCCCceEEEeecccchhhhhHHHHHHHHHHHhc
Q 010421 384 QSLLEHPSGLLPLYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLSRLID 435 (511)
Q Consensus 384 ~~~~~~~~~~~~ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a~~l~ 435 (511)
.+..+. ....+ +..++.||||++|.......+..+..|++.+|..+.
T Consensus 394 -~i~vd~--~~~~~--v~~ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~ 440 (965)
T 2gag_A 394 -KLDWDT--TIHAF--VPADAVANQHLAGAMTGRLDTASALSTGAATGAAAA 440 (965)
T ss_dssp -CEEEET--TTTEE--EECSCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHH
T ss_pred -cEEEcC--ccccc--ccCCCCCCEEEEEecCCchhHHHHHHHHHHHHHHHH
Confidence 010011 11111 113578999999987765445578889998888764
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.85 E-value=3.8e-22 Score=203.91 Aligned_cols=292 Identities=14% Similarity=0.132 Sum_probs=171.7
Q ss_pred CCeEEEECCCHHHHHHHHhc----cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL----RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
.+||+|||||++|+++|..| .+++|+|+|+++.+++.... +... ......+++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~---~~~~--------------------~g~~~~~~~ 58 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF---PHLA--------------------MGWRKFEDI 58 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH---HHHH--------------------HTCSCGGGS
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc---chhc--------------------cCccCHHHH
Confidence 37999999999999999999 37899999998776532111 0000 000011112
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
...+..++++.++ .+.. .+|+.++.. .. +|.+.++. ++.||+||+|||. .|
T Consensus 59 ~~~~~~~~~~~gv--~~~~-~~v~~id~~-----------------~~-~v~~~~g~-----~i~~d~liiAtG~---~~ 109 (430)
T 3h28_A 59 SVPLAPLLPKFNI--EFIN-EKAESIDPD-----------------AN-TVTTQSGK-----KIEYDYLVIATGP---KL 109 (430)
T ss_dssp EEESTTTGGGGTE--EEEC-SCEEEEETT-----------------TT-EEEETTCC-----EEECSEEEECCCC---EE
T ss_pred HHHHHHHHHhcCC--EEEE-EEEEEEECC-----------------CC-EEEECCCc-----EEECCEEEEcCCc---cc
Confidence 2222333445565 4444 588888762 11 46665543 7899999999994 45
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchh--hhhhccCCCcEEEECCCCCH------HHHHHHHHH----hcCCCCCCc
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKE--AASQLLKDKKVAVVGFKKSA------IDLAKECAE----SNQGPEGQP 227 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~--~~~~~~~~k~V~VvG~G~sg------~d~a~~l~~----~~~~~~~~~ 227 (511)
..|.+ .. .+...+...+.+.... .......+++++|||+|.+| +|+|..++. .+.. ...+
T Consensus 110 ~~pg~------~~-~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~-~~~~ 181 (430)
T 3h28_A 110 VFGAE------GQ-EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIR-YKVP 181 (430)
T ss_dssp ECCSB------TH-HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCG-GGCC
T ss_pred ccCCC------CC-cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCc-cceE
Confidence 55532 11 1111111111111000 00011235678899998765 898866653 2210 0124
Q ss_pred EEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCC
Q 010421 228 CTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPD 307 (511)
Q Consensus 228 Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~ 307 (511)
|+++.+.+. +.+... .+.+
T Consensus 182 V~~v~~~~~-~~~~~l-~~~~----------------------------------------------------------- 200 (430)
T 3h28_A 182 MTFITSEPY-LGHFGV-GGIG----------------------------------------------------------- 200 (430)
T ss_dssp EEEECSSSS-TTCTTT-TCST-----------------------------------------------------------
T ss_pred EEEecCCcc-cccccc-Ccch-----------------------------------------------------------
Confidence 888877653 100000 0000
Q ss_pred CccccccccccccccCCchhhhhccCeEEEEeCc-eeEEeCCcEEEcC----CceeeccEEEEecCCCCcccccccCCCc
Q 010421 308 HPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRAS-KWWFWKGGLEFED----NTKLEADVVILCTGYDGKKKLKAFLPEP 382 (511)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~-i~~~~~~~v~~~d----G~~~~~D~VI~aTG~~~~~~~~~~~~~~ 382 (511)
...+.+.+.+++.+|+++.+. |.+++++++++++ |+++++|.||+|+|++++..+.+. .
T Consensus 201 -------------~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~-~-- 264 (430)
T 3h28_A 201 -------------ASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASA-G-- 264 (430)
T ss_dssp -------------THHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTT-C--
T ss_pred -------------HHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhc-c--
Confidence 000112245666778888875 8899999999887 778999999999999987543221 0
Q ss_pred ccccccCCCC-cccceeeecCCCCCceEEEeecccc-------------hhhhhHHHHHHHHHHHh
Q 010421 383 FQSLLEHPSG-LLPLYRGTIHPLIPNMAFVGYIESV-------------SNLHTAELRSIWLSRLI 434 (511)
Q Consensus 383 ~~~~~~~~~~-~~~ly~~~~~~~~pnl~~iG~~~~~-------------~~~~~~e~qa~~~a~~l 434 (511)
.++ .++++ .+.+...+..+++||+|++|..... .+...+..||+.+|..|
T Consensus 265 -~gl-~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni 328 (430)
T 3h28_A 265 -DKV-ANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNI 328 (430)
T ss_dssp -TTT-BCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHH
T ss_pred -ccC-cCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHH
Confidence 112 24455 5777776666789999999976542 23467888998888766
No 90
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.84 E-value=2.8e-21 Score=216.44 Aligned_cols=172 Identities=19% Similarity=0.255 Sum_probs=113.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
.+||+|||||++|+++|..| .|+ +|+|||+.+.+||.+.+ ..|. |....++.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~-~ip~------------------------~~~~~~~~ 241 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTS-EIPQ------------------------FRLPYDVV 241 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHH-TSCT------------------------TTSCHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccc-cCCc------------------------ccCCHHHH
Confidence 46899999999999999999 888 79999999999998654 2111 11123466
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
++..++.+++++ .+++++.|.. +.|++.++. .+.||+||+|||+. .|+
T Consensus 242 ~~~~~~~~~~gv--~~~~~~~v~~-----------------------~~v~~~~~~-----~~~~d~vvlAtGa~--~p~ 289 (1025)
T 1gte_A 242 NFEIELMKDLGV--KIICGKSLSE-----------------------NEITLNTLK-----EEGYKAAFIGIGLP--EPK 289 (1025)
T ss_dssp HHHHHHHHTTTC--EEEESCCBST-----------------------TSBCHHHHH-----HTTCCEEEECCCCC--EEC
T ss_pred HHHHHHHHHCCc--EEEcccEecc-----------------------ceEEhhhcC-----ccCCCEEEEecCCC--CCC
Confidence 666777777887 6777655421 013333321 46799999999962 466
Q ss_pred CCCC-CCCCCCCcccceEEeccccCccchhh---------hhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEE
Q 010421 161 IPAF-PNNKGPEVFEGQVLHSIDYCKLDKEA---------ASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTM 230 (511)
Q Consensus 161 ~p~~-~~~~g~~~~~g~~~hs~~~~~~~~~~---------~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl 230 (511)
.+.+ + |.+... .++++.++....... ......+++|+|||+|.+|+|+|..+.+.+. ++||+
T Consensus 290 ~l~~~~---G~~~~~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~----~~Vtv 361 (1025)
T 1gte_A 290 TDDIFQ---GLTQDQ-GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGA----RRVFL 361 (1025)
T ss_dssp CCGGGT---TCCTTT-TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTC----SEEEE
T ss_pred CCCCCC---CCCCCC-CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCC----CEEEE
Confidence 5543 3 333222 255555442210000 0011246799999999999999999998874 25999
Q ss_pred EEecCceeec
Q 010421 231 IVRTTHWTVP 240 (511)
Q Consensus 231 ~~R~~~~~~p 240 (511)
+.|++..++|
T Consensus 362 v~r~~~~~~~ 371 (1025)
T 1gte_A 362 VFRKGFVNIR 371 (1025)
T ss_dssp ECSSCGGGCC
T ss_pred EEecChhhCC
Confidence 9998754444
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.82 E-value=3.7e-21 Score=196.38 Aligned_cols=103 Identities=12% Similarity=0.116 Sum_probs=71.4
Q ss_pred hhccCeEEEEeCc-eeEEeCCcEEEcC--C--ceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCC
Q 010421 329 EAEKGKIVFKRAS-KWWFWKGGLEFED--N--TKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHP 403 (511)
Q Consensus 329 ~l~~g~v~v~~~~-i~~~~~~~v~~~d--G--~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~ 403 (511)
.+++.+|+++.+. |.+++++++++++ | +++++|.||+|+|.+++..+.. .. ..+..+..+.+.+...+.++
T Consensus 209 ~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~-~~---~~l~~~~~g~i~vd~~lq~t 284 (430)
T 3hyw_A 209 LFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVAS-AG---DKVANPANKMVIVNRCFQNP 284 (430)
T ss_dssp HHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHT-TC---TTTBCTTTCCBCCCTTSBCS
T ss_pred HHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHh-cc---cccccCCceEEEecccccCC
Confidence 4556678888886 8899999988865 3 3699999999999998743221 11 11111223345556666678
Q ss_pred CCCceEEEeecccc-------------hhhhhHHHHHHHHHHHhc
Q 010421 404 LIPNMAFVGYIESV-------------SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 404 ~~pnl~~iG~~~~~-------------~~~~~~e~qa~~~a~~l~ 435 (511)
++||+|++|..... .+...|..||+.+|++|.
T Consensus 285 ~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~ 329 (430)
T 3hyw_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIV 329 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHH
Confidence 99999999976431 123579999999998774
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.82 E-value=1.4e-20 Score=195.31 Aligned_cols=259 Identities=15% Similarity=0.110 Sum_probs=161.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.+||+|||||++|+++|.+| . ++|+|||+++.+||.|....+. +.. ++ . ...++
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~------------~~g--~~----~---~~~~~-- 163 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK------------QEG--FN----K---DSRKV-- 163 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE------------ETT--TT----E---EHHHH--
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc------------cCC--CC----C---CHHHH--
Confidence 36899999999999999999 7 9999999999999987652110 000 00 0 23333
Q ss_pred HHHHHHHhc--CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 82 YLESYAKHF--DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 82 yl~~~~~~~--~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
+..+.+.+ ++ .++++++|.+++.. ...+.+...+. ++...+.||+||+|||+ .|
T Consensus 164 -~~~l~~~l~~~v--~~~~~~~v~~i~~~----------------~~~~~~~~~~~--~~~~~~~~d~lvlAtGa---~~ 219 (493)
T 1y56_A 164 -VEELVGKLNENT--KIYLETSALGVFDK----------------GEYFLVPVVRG--DKLIEILAKRVVLATGA---ID 219 (493)
T ss_dssp -HHHHHHTCCTTE--EEETTEEECCCEEC----------------SSSEEEEEEET--TEEEEEEESCEEECCCE---EE
T ss_pred -HHHHHHHHhcCC--EEEcCCEEEEEEcC----------------CcEEEEEEecC--CeEEEEECCEEEECCCC---Cc
Confidence 33334433 44 56778899888872 33454443332 23346899999999995 56
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceee
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTV 239 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~ 239 (511)
..|.+| |.+. .+ +++..++..... ......+++|+|||+|.+|+| ..+.+.+ |.+.....
T Consensus 220 ~~~~~~---g~~~-~g-v~~~~~~~~~~~--~~~~~~~~~vvViGgG~~gle--~~l~~~G-------V~v~~~~~---- 279 (493)
T 1y56_A 220 STMLFE---NNDM-PG-VFRRDFALEVMN--VWEVAPGRKVAVTGSKADEVI--QELERWG-------IDYVHIPN---- 279 (493)
T ss_dssp CCCCCT---TTTS-TT-EEEHHHHHHHHH--TSCBCSCSEEEEESTTHHHHH--HHHHHHT-------CEEEECSS----
T ss_pred cCCCCC---CCCC-CC-EEEcHHHHHHHH--hcccCCCCEEEEECCCHHHHH--HHHHhCC-------cEEEeCCe----
Confidence 777777 5442 22 455443322110 011346799999999999998 3343333 33322111
Q ss_pred cCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccc
Q 010421 240 PHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQM 319 (511)
Q Consensus 240 p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 319 (511)
T Consensus 280 -------------------------------------------------------------------------------- 279 (493)
T 1y56_A 280 -------------------------------------------------------------------------------- 279 (493)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCchhhhhccCeEEEEeCceeEEeCC----cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCccc
Q 010421 320 AIMPEGFFSEAEKGKIVFKRASKWWFWKG----GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLP 395 (511)
Q Consensus 320 ~~~~~~~~~~l~~g~v~v~~~~i~~~~~~----~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (511)
+.+++.+ +|+++||+++++|.||+|+|++++..+...++..+ ..++.+.+.
T Consensus 280 ----------------------v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~---~~~~~g~i~ 334 (493)
T 1y56_A 280 ----------------------VKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKL---RFRRGYYSP 334 (493)
T ss_dssp ----------------------EEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCE---EEETTEEEE
T ss_pred ----------------------eEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCc---cccCCceee
Confidence 2222221 25577888999999999999999976654333211 001222222
Q ss_pred -ceeeecCCCCCceEEEeecccchhhhhHHHHHHHHHHHhcCC
Q 010421 396 -LYRGTIHPLIPNMAFVGYIESVSNLHTAELRSIWLSRLIDDK 437 (511)
Q Consensus 396 -ly~~~~~~~~pnl~~iG~~~~~~~~~~~e~qa~~~a~~l~g~ 437 (511)
+...+. +.|++|++|..........+..|++.+|..+.+.
T Consensus 335 ~vd~~~~--s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~ 375 (493)
T 1y56_A 335 VLDEYHR--IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKE 375 (493)
T ss_dssp CCCTTSE--EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccC--cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHH
Confidence 222222 5699999998877656677889999999877553
No 93
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.80 E-value=9.8e-19 Score=177.02 Aligned_cols=100 Identities=16% Similarity=0.105 Sum_probs=69.8
Q ss_pred hhccCeEEEEeCc-eeEEeC--C--cEEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceee-ecC
Q 010421 329 EAEKGKIVFKRAS-KWWFWK--G--GLEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRG-TIH 402 (511)
Q Consensus 329 ~l~~g~v~v~~~~-i~~~~~--~--~v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~-~~~ 402 (511)
.+++.+|+++.+. +..++. + .|.++||+++++|.|++|+|.+++..+.+ .++ .++.+.+.+..+ +.+
T Consensus 211 ~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~------~gl-~~~~G~i~VD~~tl~~ 283 (401)
T 3vrd_B 211 GTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQS------ASL-TNDSGWCPVDIRTFES 283 (401)
T ss_dssp TSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHH------TTC-CCTTSSBCBCTTTCBB
T ss_pred HHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhh------ccc-cccCCCEEECCCccee
Confidence 3556678888764 555442 2 38889999999999999999988632211 111 245566777766 456
Q ss_pred CCCCceEEEeecccc----hhhhhHHHHHHHHHHHhc
Q 010421 403 PLIPNMAFVGYIESV----SNLHTAELRSIWLSRLID 435 (511)
Q Consensus 403 ~~~pnl~~iG~~~~~----~~~~~~e~qa~~~a~~l~ 435 (511)
+++||+|++|..... .+...+..||+.+|++|.
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~ 320 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVV 320 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHH
Confidence 889999999986532 234678999999998764
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.31 E-value=5.1e-13 Score=134.45 Aligned_cols=136 Identities=21% Similarity=0.255 Sum_probs=87.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC---------CCcCc---eeccCCCCccc----c--
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS---------CSYNS---TKLQSHRSDYE----F-- 60 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~---------~~~~~---~~~~~~~~~~~----~-- 60 (511)
|++.+||+|||||++|+++|..| .|.+|+|+|+++.+|+.|.. +.... .....+..... |
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTN 80 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCH
Confidence 54568999999999999999999 89999999999888665431 01100 00000100000 0
Q ss_pred ---------CCCCCCC-CCCCCCC--ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce
Q 010421 61 ---------TDFPWPN-RDDPGFP--SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW 128 (511)
Q Consensus 61 ---------~~~~~~~-~~~~~~~--~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (511)
...++.. .....|+ ...++.+++...+++.++ .++++++|+++....+. .++.|
T Consensus 81 ~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~~g------------~~~~~ 146 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQND------------EKVRF 146 (401)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECCSC------------SSCCE
T ss_pred HHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEcccCc------------CCCeE
Confidence 0111100 0012233 678888999999999998 89999999999872100 02347
Q ss_pred EEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 129 EVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 129 ~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.|.+.++ ++.||+||+|||..+
T Consensus 147 ~v~~~~g------~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 147 VLQVNST------QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEEETTE------EEEESEEEECCCCSS
T ss_pred EEEECCC------EEECCEEEECCCCcc
Confidence 6655322 689999999999873
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.16 E-value=1.1e-10 Score=103.64 Aligned_cols=106 Identities=28% Similarity=0.296 Sum_probs=77.7
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDY 82 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (511)
+||+|||||++|+.+|..| .|.+|+|+|+++..- .. . .....++.+ +......++.++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~---~~-~---------~~~~~~~~~-------~~~~~~~~~~~~ 61 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV---KG-V---------SRVPNYPGL-------LDEPSGEELLRR 61 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT---TT-C---------SCCCCSTTC-------TTCCCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc---cC-c---------hhhhccCCC-------cCCCCHHHHHHH
Confidence 6999999999999999999 899999999976321 10 0 000111111 112457889999
Q ss_pred HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 83 LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 83 l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+.+.++++++ .++++ +|++++.. ++.|.|++.++ ++.+|.||+|+|..
T Consensus 62 l~~~~~~~gv--~v~~~-~v~~i~~~----------------~~~~~v~~~~g------~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 62 LEAHARRYGA--EVRPG-VVKGVRDM----------------GGVFEVETEEG------VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHTTC--EEEEC-CCCEEEEC----------------SSSEEEECSSC------EEEEEEEEECCTTC
T ss_pred HHHHHHHcCC--EEEeC-EEEEEEEc----------------CCEEEEEECCC------EEEECEEEECCCCC
Confidence 9999999998 88999 99999873 34466765433 68999999999953
No 96
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.15 E-value=1.5e-10 Score=116.92 Aligned_cols=133 Identities=20% Similarity=0.278 Sum_probs=86.3
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-----CcC-------ceeccCCCCccc----c----
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-----SYN-------STKLQSHRSDYE----F---- 60 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-----~~~-------~~~~~~~~~~~~----~---- 60 (511)
+.+||+|||||++|+++|..| .|.+|+|+|+++.+|+.+... .+. ......+..... |
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 457999999999999999999 899999999999887655210 000 000011111000 0
Q ss_pred -------CCCCCCCC-CCCCC--CChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEE
Q 010421 61 -------TDFPWPNR-DDPGF--PSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEV 130 (511)
Q Consensus 61 -------~~~~~~~~-~~~~~--~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v 130 (511)
...++... ....| ....++.+.+.+.+++.++ .++++++|+++... ++.|.|
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~~----------------~~~~~V 167 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVERT----------------ASGFRV 167 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEEE----------------TTEEEE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEEe----------------CCEEEE
Confidence 00111000 00111 2456888999999988898 89999999999873 445777
Q ss_pred EEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 131 AVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 131 ~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+.++ ++.||+||+|||..+ .|.
T Consensus 168 ~~~~g------~i~ad~VIlAtG~~S-~p~ 190 (417)
T 3v76_A 168 TTSAG------TVDAASLVVASGGKS-IPK 190 (417)
T ss_dssp EETTE------EEEESEEEECCCCSS-CGG
T ss_pred EECCc------EEEeeEEEECCCCcc-CCC
Confidence 65433 789999999999873 443
No 97
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.12 E-value=1.6e-10 Score=116.21 Aligned_cols=133 Identities=12% Similarity=0.080 Sum_probs=87.7
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC------------Cc----------CceeccCCCCc-
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC------------SY----------NSTKLQSHRSD- 57 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~------------~~----------~~~~~~~~~~~- 57 (511)
+.+||+|||||++|+++|..| .|++|+|+|+.+.+|+..... .. .+.....+...
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 357999999999999999999 899999999988776532220 00 01111111110
Q ss_pred -cccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeC
Q 010421 58 -YEFTDFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTH 135 (511)
Q Consensus 58 -~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~ 135 (511)
..+........ ......+..+.++|.+.+++.++ .++++++|+++... ++.+. |++.+.
T Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~----------------~~~v~gv~~~~~ 143 (397)
T 3cgv_A 83 PIILQSEKAGNE-VGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKE----------------NGKVAGAKIRHN 143 (397)
T ss_dssp CEEEC-----CC-CEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEE----------------TTEEEEEEEEET
T ss_pred EEEEeccccCCc-eeEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEEe----------------CCEEEEEEEEEC
Confidence 11111000000 12234678888999999988888 89999999999873 45566 777543
Q ss_pred CCCceeEEEeCEEEEeecccC
Q 010421 136 NSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~ 156 (511)
. ...++.+|.||.|+|..|
T Consensus 144 ~--~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 144 N--EIVDVRAKMVIAADGFES 162 (397)
T ss_dssp T--EEEEEEEEEEEECCCTTC
T ss_pred C--eEEEEEcCEEEECCCcch
Confidence 2 223789999999999774
No 98
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.11 E-value=1e-10 Score=115.19 Aligned_cols=128 Identities=22% Similarity=0.319 Sum_probs=85.4
Q ss_pred CeEEEECCCHHHHHHHHhc-c----CCCcEEEcCCCCcCccccCCC---cCceeccCCCCccccCC--------------
Q 010421 5 SKIAIIGAGVSGLAAVKQL-R----HHNPVVFEASDSIGGIWKSCS---YNSTKLQSHRSDYEFTD-------------- 62 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l-~----g~~v~v~e~~~~~GG~w~~~~---~~~~~~~~~~~~~~~~~-------------- 62 (511)
+||+|||||++|+++|..| . |++|+|||+++.+||.|.... +++...+.....+....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 5999999999999999999 5 689999999999999876522 12222222222211100
Q ss_pred -----CCCCCC--------CCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE
Q 010421 63 -----FPWPNR--------DDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE 129 (511)
Q Consensus 63 -----~~~~~~--------~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (511)
.++... ....|.....+..+++.+++..+. .++++++|++|++. ++.|+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~----------------~~~~~ 143 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLR----------------DDKWE 143 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEEC----------------SSSEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEc----------------CCEEE
Confidence 011100 001222233445667777777776 89999999999983 55688
Q ss_pred EEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 130 VAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 130 v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
|++.++. .+.||.||+|+...
T Consensus 144 v~~~~g~-----~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 144 VSKQTGS-----PEQFDLIVLTMPVP 164 (342)
T ss_dssp EEESSSC-----CEEESEEEECSCHH
T ss_pred EEECCCC-----EEEcCEEEECCCHH
Confidence 8876653 57999999999853
No 99
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.09 E-value=6.3e-10 Score=112.83 Aligned_cols=137 Identities=16% Similarity=0.147 Sum_probs=86.1
Q ss_pred CCC-CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC----cCccccCCCc--------------------CceeccC
Q 010421 1 MAN-YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS----IGGIWKSCSY--------------------NSTKLQS 53 (511)
Q Consensus 1 m~~-~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~----~GG~w~~~~~--------------------~~~~~~~ 53 (511)
|++ .+||+|||||++|+++|..| .|++|+|+|+.+. .|........ .+.....
T Consensus 1 M~~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 80 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVR 80 (421)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEE
T ss_pred CCCccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEe
Confidence 543 48999999999999999999 8999999999763 2322111000 0011100
Q ss_pred CCCc--cccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEE
Q 010421 54 HRSD--YEFTDFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVA 131 (511)
Q Consensus 54 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 131 (511)
.... +.+...............+..+...|.+.+++.++ .++++++|++++.. ++.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~ 142 (421)
T 3nix_A 81 GKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKFF----------------GTDSVTT 142 (421)
T ss_dssp TTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEEE----------------TTEEEEE
T ss_pred CCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEe----------------CCEEEEE
Confidence 0000 01111000000012235688899999999988888 89999999999873 3456666
Q ss_pred EEeCCCCceeEEEeCEEEEeecccC
Q 010421 132 VQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 132 ~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+...+ ++..++.+|.||.|+|..+
T Consensus 143 v~~~~-g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 143 IEDIN-GNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEETT-SCEEEEEEEEEEECCGGGC
T ss_pred EEcCC-CCEEEEEcCEEEECCCCch
Confidence 65532 4445689999999999874
No 100
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.09 E-value=2.2e-10 Score=114.86 Aligned_cols=133 Identities=11% Similarity=0.090 Sum_probs=83.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcccc------CC----------------CcCceeccCCCCccc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWK------SC----------------SYNSTKLQSHRSDYE 59 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~------~~----------------~~~~~~~~~~~~~~~ 59 (511)
.+||+||||||+|+++|..| .|++|+|+||++.+|.... .. ...+.++..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 58999999999999999999 9999999999887653211 00 011111111111110
Q ss_pred cC-CCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeCCC
Q 010421 60 FT-DFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTHNS 137 (511)
Q Consensus 60 ~~-~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 137 (511)
.. ..............+..+..+|.+.+.+.+. .++++++|+.+... ++... +.... +
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~----------------~~~~~~v~~~~--~ 143 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKE----------------NGKVAGAKIRH--N 143 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEE----------------TTEEEEEEEEE--T
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeec----------------cceeeeeeecc--c
Confidence 00 0000000001224688889999999988888 89999999998873 22222 22222 2
Q ss_pred CceeEEEeCEEEEeecccC
Q 010421 138 NSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 138 ~~~~~~~~d~vVlAtG~~~ 156 (511)
++..++.+|.||.|.|..|
T Consensus 144 ~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 144 NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp TEEEEEEEEEEEECCCTTC
T ss_pred ccceEEEEeEEEeCCcccc
Confidence 3445789999999999875
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.08 E-value=2e-10 Score=102.07 Aligned_cols=97 Identities=12% Similarity=0.056 Sum_probs=61.7
Q ss_pred hccCeEEEEeCceeEEeCC--c--EEEcCCceeeccEEEEecCCCCcccccccCCCcccccccCCCCcccceeeecCCCC
Q 010421 330 AEKGKIVFKRASKWWFWKG--G--LEFEDNTKLEADVVILCTGYDGKKKLKAFLPEPFQSLLEHPSGLLPLYRGTIHPLI 405 (511)
Q Consensus 330 l~~g~v~v~~~~i~~~~~~--~--v~~~dG~~~~~D~VI~aTG~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~~~~~~ 405 (511)
+++.+|+++.+.+.+++.+ + |.+++| ++++|.||+|||.+++. ...++.++ + .+.+.+... +.++.
T Consensus 66 ~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~--~~~~g~~~-----~-~g~i~vd~~-~~t~~ 135 (180)
T 2ywl_A 66 ARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL--PSLLGLTR-----R-GAYIDTDEG-GRTSY 135 (180)
T ss_dssp HHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH--HHHHTCCE-----E-TTEECCCTT-CBCSS
T ss_pred HHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc--cccCCCCc-----c-CceEEeCCC-CCcCC
Confidence 3444566666666666542 2 666778 89999999999999853 12122111 1 222222222 23478
Q ss_pred CceEEEeecccch--hhhhHHHHHHHHHHHhcC
Q 010421 406 PNMAFVGYIESVS--NLHTAELRSIWLSRLIDD 436 (511)
Q Consensus 406 pnl~~iG~~~~~~--~~~~~e~qa~~~a~~l~g 436 (511)
|++|++|...... ....+..|++.+|..+.+
T Consensus 136 ~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 168 (180)
T 2ywl_A 136 PRVYAAGVARGKVPGHAIISAGDGAYVAVHLVS 168 (180)
T ss_dssp TTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCcchhhHHHHHHhHHHHHHHHHH
Confidence 9999999876543 456788899998887754
No 102
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.08 E-value=6.1e-10 Score=109.20 Aligned_cols=127 Identities=21% Similarity=0.308 Sum_probs=80.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccc----------------------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYE---------------------- 59 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~---------------------- 59 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||.+......+...+.....+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 47999999999999999999 899999999999999877653222222211111000
Q ss_pred ------cCCCCC---CCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEE
Q 010421 60 ------FTDFPW---PNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEV 130 (511)
Q Consensus 60 ------~~~~~~---~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v 130 (511)
+.+..+ ... ...+.....+..+.+.+++ ++ .++++++|++++.. ++.|+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~~----------------~~~~~v 140 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDE-QVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFRG----------------EEHWNL 140 (336)
T ss_dssp CCCEEEESSSBCCCCCTT-SCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEEC----------------SSCEEE
T ss_pred cccceeccCcccccCCCC-CccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEEe----------------CCEEEE
Confidence 000000 000 0111112233344444444 66 79999999999983 456888
Q ss_pred EEEeCCCCceeEE-EeCEEEEeecccC
Q 010421 131 AVQTHNSNSIQRY-GFEFLVVCTGKYG 156 (511)
Q Consensus 131 ~~~~~~~~~~~~~-~~d~vVlAtG~~~ 156 (511)
++.++. .. .+|+||+|+|..+
T Consensus 141 ~~~~g~-----~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 141 LDAEGQ-----NHGPFSHVIIATPAPQ 162 (336)
T ss_dssp EETTSC-----EEEEESEEEECSCHHH
T ss_pred EeCCCc-----CccccCEEEEcCCHHH
Confidence 765543 44 5999999999864
No 103
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.9e-12 Score=124.64 Aligned_cols=148 Identities=13% Similarity=0.082 Sum_probs=89.9
Q ss_pred CCeEEEECCCHHHHHHHHhc----cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL----RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l----~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
.+||+||||||+||+||.+| .|++|+|||+++.+||.... .+.. ++ ...+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~---~~~~--------------~~---------~~~l 118 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL---GGQL--------------FS---------AMVM 118 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC---CSTT--------------CC---------CEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe---CCcc--------------CC---------HHHH
Confidence 47999999999999999999 48999999999999986543 1110 00 0000
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
........+++++ .+..+.. .....+.++++++. .+
T Consensus 119 ~~~~~~~~~e~Gv--~~~~~~~---------------------------------------~~~~~~~~~~~~~~---~~ 154 (326)
T 3fpz_A 119 RKPAHLFLQELEI--PYEDEGD---------------------------------------YVVVKHAALFISTV---LS 154 (326)
T ss_dssp ETTTHHHHHHTTC--CCEECSS---------------------------------------EEEESCHHHHHHHH---HH
T ss_pred HHHHHHHHHHcCC--EEEECCc---------------------------------------ceecceeEEEEcch---hh
Confidence 1111223445555 2222100 02233445556663 34
Q ss_pred CCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 160 IIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 160 ~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..+.++ |...+.+.-......+. .....+++++|||+|.++++.|..+...+.. +++..+..
T Consensus 155 ~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viggg~~av~~a~~~~~~~~~-----v~i~~~~~ 216 (326)
T 3fpz_A 155 KVLQLP---NVKLFNATCVEDLVTRP------PTEKGEVTVAGVVTNWTLVTQAHGTQCAMDP-----NVIELAGY 216 (326)
T ss_dssp HHHTST---TEEEETTEEEEEEEEES------SCSSSSCEEEEEEEEEHHHHTCTTSSSCCCC-----EEEEESCB
T ss_pred hccccc---cceeecccccceeeccC------CcccCCCEEEEEccCceeeehhhhhhhccCc-----EEEEeecc
Confidence 555566 66655554332222222 2346789999999999999998777666543 78776653
No 104
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.04 E-value=8.3e-10 Score=102.33 Aligned_cols=121 Identities=14% Similarity=0.014 Sum_probs=77.5
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCcc-ccCCCCCCCCCCCCCCChHH
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDY-EFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (511)
++.+||+|||||++|+.+|..| .|.+|+|+|++....|.|.. +.........++ .+.+ ..-+...+
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~---~~~~~~~~~~~~~~~~d--------~~g~~~~~ 69 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFL---PPKPPFPPGSLLERAYD--------PKDERVWA 69 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS---CCCSCCCTTCHHHHHCC--------TTCCCHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccC---ccccccchhhHHhhhcc--------CCCCCHHH
Confidence 1458999999999999999999 89999999998443342221 111000000000 0100 00115668
Q ss_pred HHHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 79 ILDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 79 ~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+..++.+.+++. ++ .++ +++|+++...+ +..+.|.+.++. ++.+|.||+|+|.++
T Consensus 70 ~~~~l~~~~~~~~gv--~i~-~~~v~~i~~~~---------------~~v~~v~~~~g~-----~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 70 FHARAKYLLEGLRPL--HLF-QATATGLLLEG---------------NRVVGVRTWEGP-----PARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHTCTTE--EEE-ECCEEEEEEET---------------TEEEEEEETTSC-----CEECSEEEECCTTCS
T ss_pred HHHHHHHHHHcCCCc--EEE-EeEEEEEEEeC---------------CEEEEEEECCCC-----EEECCEEEECCCCCh
Confidence 888898888887 76 555 67999998731 222445554442 689999999999763
No 105
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.02 E-value=4.3e-10 Score=116.41 Aligned_cols=136 Identities=17% Similarity=0.150 Sum_probs=86.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCcee-ccCCCCccc-cCCCCCCCCCCCCCCChHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTK-LQSHRSDYE-FTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 78 (511)
..+||+|||||++|+++|..| .|++|+|+|+++.+|+....+.++... .-....... ...+... .....+..+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~ 167 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTG---TLDHISIRQ 167 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCT---TCCEEEHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccccc---ccccCCHHH
Confidence 357999999999999999999 899999999998877532111111000 000000000 0011100 011235678
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+.++|.+.+++.++ .++++++|+++....+ +.+.|.|++.+..+++..++.+|.||+|+|..|
T Consensus 168 l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~~-------------~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 168 LQLLLLKVALLLGV--EIHWGVKFTGLQPPPR-------------KGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHTTC--EEEESCEEEEEECCCS-------------TTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHhCCC--EEEeCCEEEEEEEecC-------------CCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 88999999988888 8999999999986210 134688887543123223688999999999774
No 106
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.00 E-value=2e-09 Score=108.70 Aligned_cols=137 Identities=18% Similarity=0.124 Sum_probs=83.7
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCC-cEEEcCCCCcCccccCC-CcCc---------e----e-ccCCCCccccCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHN-PVVFEASDSIGGIWKSC-SYNS---------T----K-LQSHRSDYEFTD 62 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~-v~v~e~~~~~GG~w~~~-~~~~---------~----~-~~~~~~~~~~~~ 62 (511)
|++.+||+|||||++|+++|..| .|++ |+|+|+.+.++...... .++. + . ...+...+.+.+
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~ 80 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID 80 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc
Confidence 65678999999999999999999 8999 99999987654321110 0000 0 0 000000011100
Q ss_pred --------CCC----CCCCCCCCCChHHHHHHHHHHHHh-cC-CCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce
Q 010421 63 --------FPW----PNRDDPGFPSYTEILDYLESYAKH-FD-VFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW 128 (511)
Q Consensus 63 --------~~~----~~~~~~~~~~~~~~~~yl~~~~~~-~~-~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~ 128 (511)
.+. ..........+.++.++|.+.+.+ .+ . .++++++|++++. ++.+
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~--~v~~~~~v~~i~~-----------------~~~v 141 (410)
T 3c96_A 81 QSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQ--AVRTGLGVERIEE-----------------RDGR 141 (410)
T ss_dssp TTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTT--SEEESEEEEEEEE-----------------ETTE
T ss_pred CCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCc--EEEECCEEEEEec-----------------CCcc
Confidence 000 000011234567888888888765 45 3 6999999999986 2246
Q ss_pred EEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 129 EVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 129 ~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+|++.+..+++..++.+|.||.|+|.+|
T Consensus 142 ~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 142 VLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp EEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred EEEEecCCCCCceEEecCEEEECCCccc
Confidence 7877762223334789999999999875
No 107
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.00 E-value=1e-09 Score=110.40 Aligned_cols=128 Identities=17% Similarity=0.206 Sum_probs=80.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc-----CccccCCCcCceec-------------cCCCCccccC-
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI-----GGIWKSCSYNSTKL-------------QSHRSDYEFT- 61 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~-----GG~w~~~~~~~~~~-------------~~~~~~~~~~- 61 (511)
+.+||+|||||++|+++|..| .|++|+|||+.+.+ |+.+......+... ..+... .+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~~ 103 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIAD 103 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEEC
Confidence 457999999999999999999 89999999998654 33332210000000 000000 000
Q ss_pred -------CC--CCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEE
Q 010421 62 -------DF--PWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAV 132 (511)
Q Consensus 62 -------~~--~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 132 (511)
.. +...........+..+.++|.+.+.. . .++++++|++++.. ++.|+|++
T Consensus 104 ~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~----------------~~~v~v~~ 163 (398)
T 2xdo_A 104 EKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPG----------------KKKWTLTF 163 (398)
T ss_dssp SSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEEC----------------SSSEEEEE
T ss_pred CCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEEC----------------CCEEEEEE
Confidence 00 10000011224567777777665432 2 68999999999973 45688877
Q ss_pred EeCCCCceeEEEeCEEEEeecccC
Q 010421 133 QTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 133 ~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.++. ++.+|.||.|+|.+|
T Consensus 164 ~~g~-----~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 164 ENKP-----SETADLVILANGGMS 182 (398)
T ss_dssp TTSC-----CEEESEEEECSCTTC
T ss_pred CCCc-----EEecCEEEECCCcch
Confidence 6654 689999999999875
No 108
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.98 E-value=2.1e-09 Score=111.28 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=88.3
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC--------------CcCceeccCCCCccccCCCC-
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC--------------SYNSTKLQSHRSDYEFTDFP- 64 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~~~~~~~~~~~~~~~~~~- 64 (511)
++.+||+||||||+|+++|..| .|++|+|+|+.+.++..-... ..+.+.-..+.....|....
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 4568999999999999999999 899999999987654211100 00000000011111111100
Q ss_pred ----CCCCC-CCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCc
Q 010421 65 ----WPNRD-DPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNS 139 (511)
Q Consensus 65 ----~~~~~-~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (511)
.+... .........+.+.|.+.+++.++ .++++++|++++.. ++.++|++.++. +
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~----------------~~~v~v~~~~~~-g- 148 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTDD----------------GAGVTVEVRGPE-G- 148 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEEE----------------TTEEEEEEEETT-E-
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEEc----------------CCeEEEEEEcCC-C-
Confidence 00000 01224577888999999988887 89999999999873 445778887764 2
Q ss_pred eeEEEeCEEEEeecccC
Q 010421 140 IQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 140 ~~~~~~d~vVlAtG~~~ 156 (511)
..++.+|+||.|.|.+|
T Consensus 149 ~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 149 KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEEESEEEECCCTTC
T ss_pred CEEEEeCEEEECCCcch
Confidence 34789999999999985
No 109
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.97 E-value=1.1e-09 Score=112.25 Aligned_cols=135 Identities=13% Similarity=0.028 Sum_probs=85.0
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc--CccccCC-----CcCceeccCCC---------CccccCC-
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI--GGIWKSC-----SYNSTKLQSHR---------SDYEFTD- 62 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~--GG~w~~~-----~~~~~~~~~~~---------~~~~~~~- 62 (511)
++.+||+|||||++|+++|..| .|++|+|+|+.+.. |..+... .+..+.+..+. ....+..
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 3458999999999999999999 89999999998753 2222210 00000000000 0000000
Q ss_pred ----CCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeCCC
Q 010421 63 ----FPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTHNS 137 (511)
Q Consensus 63 ----~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~ 137 (511)
++++. ......+.++.+.|.+.+.+.++ .++++++|+++... ++.+. |++.+..+
T Consensus 84 ~~~~~~~~~--~~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~----------------~~~v~gv~~~~~~~ 143 (453)
T 3atr_A 84 MQTVWTVNG--EGFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIFE----------------DGYVKGAVLFNRRT 143 (453)
T ss_dssp SSCEEEEEE--EEEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEE----------------TTEEEEEEEEETTT
T ss_pred CceEEeECC--CcEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEEE----------------CCEEEEEEEEEcCC
Confidence 00000 01224677888999988888888 89999999999873 33333 55654312
Q ss_pred CceeEEEeCEEEEeecccC
Q 010421 138 NSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 138 ~~~~~~~~d~vVlAtG~~~ 156 (511)
++..++.+|.||.|+|..|
T Consensus 144 G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 144 NEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TEEEEEECSEEEECCGGGC
T ss_pred CceEEEEcCEEEECcCCch
Confidence 4444789999999999875
No 110
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.97 E-value=1.7e-09 Score=112.19 Aligned_cols=131 Identities=17% Similarity=0.278 Sum_probs=81.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcC-------ccccCCCc-C---------cee------cc----CC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIG-------GIWKSCSY-N---------STK------LQ----SH 54 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~G-------G~w~~~~~-~---------~~~------~~----~~ 54 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+.++ +.|..... + +.. +. .+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 37999999999999999999 899999999987663 33332100 0 000 00 00
Q ss_pred CC----cc-ccCCCCCCCCC---CCCCC---ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCC
Q 010421 55 RS----DY-EFTDFPWPNRD---DPGFP---SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPA 123 (511)
Q Consensus 55 ~~----~~-~~~~~~~~~~~---~~~~~---~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 123 (511)
.. .+ .|..+..+... ...+. ...++.+.+.+.+++.++ .++++++|+++...+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~~~-------------- 250 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMED-------------- 250 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEESS--------------
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEeC--------------
Confidence 00 00 00000011000 00011 135677778888888888 899999999998731
Q ss_pred CCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 124 GHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 124 ~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+..+.|++.++. ++.||.||+|+|..+
T Consensus 251 -~~v~gV~l~~G~-----~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 251 -GQITGVTLSNGE-----EIKSRHVVLAVGHSA 277 (549)
T ss_dssp -SBEEEEEETTSC-----EEECSCEEECCCTTC
T ss_pred -CEEEEEEECCCC-----EEECCEEEECCCCCh
Confidence 233457666554 799999999999763
No 111
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.96 E-value=6.2e-09 Score=108.96 Aligned_cols=136 Identities=16% Similarity=0.167 Sum_probs=89.5
Q ss_pred CC-CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC----------------------C--cCce----
Q 010421 1 MA-NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC----------------------S--YNST---- 49 (511)
Q Consensus 1 m~-~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~----------------------~--~~~~---- 49 (511)
|+ +.+||+|||||++|+++|..| .|++|+|+|+.+.++..-... . ....
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~ 80 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFV 80 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCE
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCccccccee
Confidence 54 358999999999999999999 899999999987653211100 0 0000
Q ss_pred --eccCCC--Ccc----ccCC----CCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCC
Q 010421 50 --KLQSHR--SDY----EFTD----FPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSG 117 (511)
Q Consensus 50 --~~~~~~--~~~----~~~~----~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~ 117 (511)
.+.... ... .+.. ............++..+..+|.+.+++.++ .++++++|++++..
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~--------- 149 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQH--------- 149 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEE---------
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEC---------
Confidence 000000 000 0000 000000013345788999999999988887 89999999999984
Q ss_pred CCCCCCCCC----ceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 118 GNLLPAGHP----VWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 118 ~~~~~~~~~----~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
++ .+++++.++++ ..++.+|+||.|+|.+|
T Consensus 150 -------~~~~~~~v~v~~~~~~~--~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 150 -------DDDAGAGVTARLAGPDG--EYDLRAGYLVGADGNRS 183 (535)
T ss_dssp -------CGGGCSEEEEEEEETTE--EEEEEEEEEEECCCTTC
T ss_pred -------CCCccccEEEEEEcCCC--eEEEEeCEEEECCCCcc
Confidence 33 67888877642 34799999999999875
No 112
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.95 E-value=9.6e-10 Score=110.98 Aligned_cols=129 Identities=20% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcc---ccC---------------------CCcCceeccCCC-
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGI---WKS---------------------CSYNSTKLQSHR- 55 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~---w~~---------------------~~~~~~~~~~~~- 55 (511)
+.+||+|||||++|+++|..| .|++|+|+|+.+.++.. ... .....+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 357999999999999999999 89999999998765311 000 001111111110
Q ss_pred --CccccCCCCCC--CCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEE
Q 010421 56 --SDYEFTDFPWP--NRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVA 131 (511)
Q Consensus 56 --~~~~~~~~~~~--~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 131 (511)
....++...+. .........+..+.++|.+.+.+ . .++++++|++++.. ++.|+|+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~----------------~~~v~v~ 161 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEED----------------ADGVTVW 161 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEE----------------TTEEEEE
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEec----------------CCcEEEE
Confidence 00111100000 00012334678888888888866 3 79999999999973 4567777
Q ss_pred EEeCCCCceeEEEeCEEEEeecccC
Q 010421 132 VQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 132 ~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+.++. ++.+|.||.|+|.+|
T Consensus 162 ~~~g~-----~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 162 FTDGS-----SASGDLLIAADGSHS 181 (407)
T ss_dssp ETTSC-----EEEESEEEECCCTTC
T ss_pred EcCCC-----EEeeCEEEECCCcCh
Confidence 76654 799999999999875
No 113
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.95 E-value=1.5e-09 Score=113.91 Aligned_cols=132 Identities=15% Similarity=0.137 Sum_probs=84.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC--------------CcC---ceeccCCCC--------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC--------------SYN---STKLQSHRS-------- 56 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~---~~~~~~~~~-------- 56 (511)
.+||+|||||++|+++|..| .|++|+|||+.+......... .++ .........
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 47999999999999999999 899999999987654111100 000 000000000
Q ss_pred ccccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCC
Q 010421 57 DYEFTDFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHN 136 (511)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 136 (511)
.+.+...+.+.. .........+.+.|.+.+++.++ .++++++|++++.. ++.++|++.+.+
T Consensus 129 ~~~~~~~~~~~~-~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~----------------~~~v~v~~~~~~ 189 (570)
T 3fmw_A 129 GLDFGLVDTRHP-YTGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQD----------------AEAVEVTVAGPS 189 (570)
T ss_dssp CCBGGGSCCSCC-SBBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCBC----------------SSCEEEEEEETT
T ss_pred cccccccCCCCC-eeEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEc----------------CCeEEEEEEeCC
Confidence 111111111111 12346788899999999988887 88999999999872 456778775432
Q ss_pred CCceeEEEeCEEEEeecccC
Q 010421 137 SNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 137 ~~~~~~~~~d~vVlAtG~~~ 156 (511)
++ .++.+|.||.|+|..|
T Consensus 190 -G~-~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 190 -GP-YPVRARYGVGCDGGRS 207 (570)
T ss_dssp -EE-EEEEESEEEECSCSSC
T ss_pred -Cc-EEEEeCEEEEcCCCCc
Confidence 21 3799999999999875
No 114
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.94 E-value=3e-09 Score=105.55 Aligned_cols=62 Identities=10% Similarity=0.077 Sum_probs=47.5
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+.+.+.+.+++.+. .++++++|++++.. +++.|.|.+.++ +..++.+|.||+|+|.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~---------------~~~~~~v~~~~g---~~~~~~a~~VV~A~G~ 207 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGA--QLVFHTPLIAGRVR---------------PEGGFELDFGGA---EPMTLSCRVLINAAGL 207 (369)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEC---------------TTSSEEEEECTT---SCEEEEEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCCEEEEEEEc---------------CCceEEEEECCC---ceeEEEeCEEEECCCc
Confidence 456777788888888888 89999999999983 134577766544 2237899999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
++
T Consensus 208 ~s 209 (369)
T 3dme_A 208 HA 209 (369)
T ss_dssp GH
T ss_pred ch
Confidence 74
No 115
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.94 E-value=3.7e-09 Score=109.41 Aligned_cols=134 Identities=15% Similarity=0.116 Sum_probs=88.1
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC--------------CcCceeccCCCCccccCCCC--
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC--------------SYNSTKLQSHRSDYEFTDFP-- 64 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~~~~~~~~~~~~~~~~~~-- 64 (511)
+.+||+||||||+|+++|..| .|++|+|+|+.+.++..-... ..+.+.-..+.....+....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 457999999999999999999 899999999987654211110 00000000011111111100
Q ss_pred ---CCCCC-CCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCce
Q 010421 65 ---WPNRD-DPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSI 140 (511)
Q Consensus 65 ---~~~~~-~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (511)
.+... .....+...+.+.|.+.+.+.++ .++++++|++++.. ++.++|++.++. + .
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~----------------~~~v~v~~~~~~-g-~ 150 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTDE----------------GDHVVVEVEGPD-G-P 150 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEEC----------------SSCEEEEEECSS-C-E
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEe----------------CCEEEEEEEcCC-C-c
Confidence 00000 01234578889999999988887 89999999999973 445778887764 3 3
Q ss_pred eEEEeCEEEEeecccC
Q 010421 141 QRYGFEFLVVCTGKYG 156 (511)
Q Consensus 141 ~~~~~d~vVlAtG~~~ 156 (511)
.++.+|+||.|.|.+|
T Consensus 151 ~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 151 RSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEEEEEEEEECCCTTC
T ss_pred EEEEeCEEEEccCccc
Confidence 5789999999999985
No 116
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.94 E-value=1.6e-09 Score=109.00 Aligned_cols=130 Identities=14% Similarity=0.013 Sum_probs=83.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCc---cccC-----------CC----------cCceeccCCCC-
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGG---IWKS-----------CS----------YNSTKLQSHRS- 56 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG---~w~~-----------~~----------~~~~~~~~~~~- 56 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+.+.. .... .. ...+....+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999 8999999999865511 0000 00 00000000000
Q ss_pred -ccccCCCCCCCCCCCCCCChHHHHHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce--EEEE
Q 010421 57 -DYEFTDFPWPNRDDPGFPSYTEILDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW--EVAV 132 (511)
Q Consensus 57 -~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~--~v~~ 132 (511)
...+...............+.++.+.|.+.+++. ++ .++++++|++++.. ++.| .|++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~~----------------~~~v~g~v~~ 147 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQRD----------------ERHAIDQVRL 147 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEEC----------------TTSCEEEEEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEEc----------------CCceEEEEEE
Confidence 0011100000000012357788899998888877 77 78999999999873 4456 7777
Q ss_pred EeCCCCceeEEEeCEEEEeecccC
Q 010421 133 QTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 133 ~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.++. ++.+|.||.|+|.+|
T Consensus 148 ~~g~-----~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 148 NDGR-----VLRPRVVVGADGIAS 166 (399)
T ss_dssp TTSC-----EEEEEEEEECCCTTC
T ss_pred CCCC-----EEECCEEEECCCCCh
Confidence 5543 789999999999875
No 117
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.93 E-value=1.1e-08 Score=107.35 Aligned_cols=131 Identities=14% Similarity=0.164 Sum_probs=84.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC----------------------CcCc------eeccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC----------------------SYNS------TKLQS 53 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~----------------------~~~~------~~~~~ 53 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+.++...... ..+. ..+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 36999999999999999999 899999999987765322110 0000 00000
Q ss_pred CCC--ccccCCCCC--------CCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCC
Q 010421 54 HRS--DYEFTDFPW--------PNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPA 123 (511)
Q Consensus 54 ~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~ 123 (511)
... ...+. ++. .............+.++|.+.+++. ++++++|++++..
T Consensus 106 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~--------------- 164 (549)
T 2r0c_A 106 VGGHEVYRIP-LGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQR--------------- 164 (549)
T ss_dssp BTSCEEEEEC-CCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEEC---------------
T ss_pred CCCceeEeec-ccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEe---------------
Confidence 000 11111 100 0000112346778888888888765 8999999999873
Q ss_pred CCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 124 GHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 124 ~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
++.+++++.+..+++..++.+|+||.|+|.+|
T Consensus 165 -~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 165 -DDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp -SSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred -CCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 45678888774334445799999999999885
No 118
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.91 E-value=8.7e-09 Score=98.51 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=78.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--c-CCCcEEEcCCCCcCcc-ccCC-CcCceeccCCC-CccccCCCCCCCCCCCCC--CC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R-HHNPVVFEASDSIGGI-WKSC-SYNSTKLQSHR-SDYEFTDFPWPNRDDPGF--PS 75 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~-g~~v~v~e~~~~~GG~-w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~ 75 (511)
.+||+|||||++|+++|..| . |.+|+|+|+++.+||. |... .+..+.+..+. ..+.-.+.++... ...+ ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-~~~~~~~~ 117 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQ-DTYVVVKH 117 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEEC-SSEEEESC
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccC-CCEEEecC
Confidence 46999999999999999999 5 8999999999888763 3221 11111111000 0000001222111 0111 14
Q ss_pred hHHHHHHHHHHHHh-cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEe---------CCCCceeEEE
Q 010421 76 YTEILDYLESYAKH-FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQT---------HNSNSIQRYG 144 (511)
Q Consensus 76 ~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~---------~~~~~~~~~~ 144 (511)
..++...+.+.+.+ .++ .++++++|+++... +++ ..|.+.. +..++..++.
T Consensus 118 ~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~----------------~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ 179 (284)
T 1rp0_A 118 AALFTSTIMSKLLARPNV--KLFNAVAAEDLIVK----------------GNRVGGVVTNWALVAQNHHTQSCMDPNVME 179 (284)
T ss_dssp HHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEE----------------TTEEEEEEEEEHHHHTCTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEec----------------CCeEEEEEEeccccccccCccccCceEEEE
Confidence 55666666555544 577 78999999999873 222 2344431 1112334799
Q ss_pred eCEEEEeeccc
Q 010421 145 FEFLVVCTGKY 155 (511)
Q Consensus 145 ~d~vVlAtG~~ 155 (511)
+|.||+|+|..
T Consensus 180 ad~VV~AtG~~ 190 (284)
T 1rp0_A 180 AKIVVSSCGHD 190 (284)
T ss_dssp EEEEEECCCSS
T ss_pred CCEEEECCCCc
Confidence 99999999965
No 119
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.91 E-value=2e-09 Score=112.66 Aligned_cols=168 Identities=12% Similarity=0.115 Sum_probs=94.7
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC-CcCccccCCCcCceeccC----------CCCc---------ccc
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD-SIGGIWKSCSYNSTKLQS----------HRSD---------YEF 60 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~~~~----------~~~~---------~~~ 60 (511)
..+||+|||||++|++||..| .|.+|+|+|++. .+|.... .|...... .... ..|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~C---nps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSC---NPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS---SSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccc---cccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 357999999999999999999 899999999974 3442111 11110000 0000 001
Q ss_pred CCCC---CCCCC-CCCCCChHHHHHHHHHHHHh-cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC
Q 010421 61 TDFP---WPNRD-DPGFPSYTEILDYLESYAKH-FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH 135 (511)
Q Consensus 61 ~~~~---~~~~~-~~~~~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (511)
.... .+... ......+..+...+...+++ .++ .+ ++++|+.+...+ +..+.|.+.++
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~e~---------------g~V~GV~t~dG 165 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIVEN---------------DRVVGAVTQMG 165 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEESS---------------SBEEEEEETTS
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEecC---------------CEEEEEEECCC
Confidence 0000 00000 00112456777888888877 466 56 788999998621 22234555433
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHH
Q 010421 136 NSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKE 215 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~ 215 (511)
. .+.||.||+|||.++ ..+.++ |...+ .+.+ +| |.+|.+++..
T Consensus 166 ---~--~I~Ad~VVLATGt~s---~~~~i~---G~~~~----------------------~~gr---iG-g~~a~eLA~~ 208 (651)
T 3ces_A 166 ---L--KFRAKAVVLTVGTFL---DGKIHI---GLDNY----------------------SGGR---AG-DPPSIPLSRR 208 (651)
T ss_dssp ---E--EEEEEEEEECCSTTT---CCEEEC---C---------------------------------------CCHHHHH
T ss_pred ---C--EEECCEEEEcCCCCc---cCcccc---CcccC----------------------CCCC---cc-chhhhHHHHH
Confidence 2 789999999999653 444445 43321 1223 56 7888999999
Q ss_pred HHHhcCCCCCCcEEEEEe
Q 010421 216 CAESNQGPEGQPCTMIVR 233 (511)
Q Consensus 216 l~~~~~~~~~~~Vtl~~R 233 (511)
|.+.+.. |+.+..
T Consensus 209 L~~lG~~-----v~~~~t 221 (651)
T 3ces_A 209 LRELPLR-----VGRLKT 221 (651)
T ss_dssp HHTTTCC-----EEEECC
T ss_pred HHhcCCe-----EEEecC
Confidence 9888765 887753
No 120
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.91 E-value=4.6e-09 Score=105.61 Aligned_cols=128 Identities=18% Similarity=0.140 Sum_probs=79.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc----CccccCC-----------CcCceeccCCCCccccCCC--
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI----GGIWKSC-----------SYNSTKLQSHRSDYEFTDF-- 63 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~----GG~w~~~-----------~~~~~~~~~~~~~~~~~~~-- 63 (511)
+.+||+|||||++|+++|..| .|++|+|+|+.+.. |+.+... ..+ .....+...+.+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCC
Confidence 357999999999999999999 89999999997653 2111110 000 000011111111100
Q ss_pred --CCCC-CCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCce
Q 010421 64 --PWPN-RDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSI 140 (511)
Q Consensus 64 --~~~~-~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 140 (511)
.... ...........+.++|.+.+ -+. .++++++|++++.. ++.|+|++.++.
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~----------------~~~v~v~~~~g~---- 138 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQD----------------SETVQMRFSDGT---- 138 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEEC----------------SSCEEEEETTSC----
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEec----------------CCEEEEEECCCC----
Confidence 0000 00012234566777776654 245 79999999999873 456788776653
Q ss_pred eEEEeCEEEEeecccC
Q 010421 141 QRYGFEFLVVCTGKYG 156 (511)
Q Consensus 141 ~~~~~d~vVlAtG~~~ 156 (511)
++.+|.||.|+|.+|
T Consensus 139 -~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 139 -KAEANWVIGADGGAS 153 (397)
T ss_dssp -EEEESEEEECCCTTC
T ss_pred -EEECCEEEECCCcch
Confidence 789999999999875
No 121
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.91 E-value=7.8e-09 Score=107.53 Aligned_cols=134 Identities=18% Similarity=0.166 Sum_probs=83.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC----CcCccccCCCcC------cee-----------------ccCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD----SIGGIWKSCSYN------STK-----------------LQSH 54 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~----~~GG~w~~~~~~------~~~-----------------~~~~ 54 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+ ..|.....+... ++. ....
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 37999999999999999999 899999999986 233221110000 000 0000
Q ss_pred CC--ccccCCCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce-EEE
Q 010421 55 RS--DYEFTDFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW-EVA 131 (511)
Q Consensus 55 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~-~v~ 131 (511)
.. .+.+...+...........+..+.++|.+.+.+.++ .++++++|+++... ++.. .|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~~----------------~~~v~gv~ 148 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLFE----------------GERAVGVR 148 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEE----------------TTEEEEEE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEE----------------CCEEEEEE
Confidence 00 011111111000012235788899999999988888 89999999999973 3322 255
Q ss_pred EEeCCCCceeEEEeCEEEEeecccC
Q 010421 132 VQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 132 ~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
+.+. +++..++.+|.||.|+|..|
T Consensus 149 ~~~~-dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 149 YRNT-EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp EECS-SSCEEEEEEEEEEECCCTTC
T ss_pred EEeC-CCCEEEEEcCEEEECCCcch
Confidence 5443 23345789999999999874
No 122
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.90 E-value=9.9e-09 Score=110.45 Aligned_cols=59 Identities=8% Similarity=0.153 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+...+.+.+++.|+ .++++++|+++... ++.|.|.+.++. ++.+|.||+|+|.
T Consensus 415 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~~----------------~~~v~V~t~~G~-----~i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGL--QIYYQYQLQNFSRK----------------DDCWLLNFAGDQ-----QATHSVVVLANGH 471 (676)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEEE----------------TTEEEEEETTSC-----EEEESEEEECCGG
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeeeEEEEe----------------CCeEEEEECCCC-----EEECCEEEECCCc
Confidence 346677778888888888 89999999999973 455777665543 7899999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
.+
T Consensus 472 ~s 473 (676)
T 3ps9_A 472 QI 473 (676)
T ss_dssp GG
T ss_pred ch
Confidence 74
No 123
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.90 E-value=2.9e-09 Score=106.41 Aligned_cols=126 Identities=17% Similarity=0.168 Sum_probs=82.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC--------------CcCce-eccCCCCccccC-----
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC--------------SYNST-KLQSHRSDYEFT----- 61 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~--------------~~~~~-~~~~~~~~~~~~----- 61 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+.+++.-... ..+.+ ....+...+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 47999999999999999999 899999999987764310000 00000 000000001100
Q ss_pred --CCCCCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCc
Q 010421 62 --DFPWPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNS 139 (511)
Q Consensus 62 --~~~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (511)
.++.+.. ......+.++.++|.+.+++.++ .++++++|++++. ++ .|++.++.
T Consensus 91 ~~~~~~~~~-~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-----------------~~--~v~~~~g~--- 145 (379)
T 3alj_A 91 VSKETFNGL-PWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP-----------------VG--RLTLQTGE--- 145 (379)
T ss_dssp EEEECGGGC-CEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET-----------------TT--EEEETTSC---
T ss_pred eeeccCCCC-ceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe-----------------CC--EEEECCCC---
Confidence 0111000 12234678889999999988888 8999999999975 23 57765543
Q ss_pred eeEEEeCEEEEeecccC
Q 010421 140 IQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 140 ~~~~~~d~vVlAtG~~~ 156 (511)
++.+|.||.|+|..|
T Consensus 146 --~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 146 --VLEADLIVGADGVGS 160 (379)
T ss_dssp --EEECSEEEECCCTTC
T ss_pred --EEEcCEEEECCCccH
Confidence 789999999999764
No 124
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.90 E-value=8.4e-09 Score=108.56 Aligned_cols=134 Identities=19% Similarity=0.154 Sum_probs=86.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcC------------------------ceec--cCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYN------------------------STKL--QSH 54 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~------------------------~~~~--~~~ 54 (511)
+.+||+|||||++|+++|..| .|++|+|+|+.+..+........| +... ...
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 101 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQD 101 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCC
Confidence 458999999999999999999 899999999975432110000000 0000 000
Q ss_pred CC--ccccCCCCC---CCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE
Q 010421 55 RS--DYEFTDFPW---PNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE 129 (511)
Q Consensus 55 ~~--~~~~~~~~~---~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~ 129 (511)
.. .+.+..... ... ......+..+.++|.+.+++.++ .++++++|+++... +++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~-~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~~---------------~g~~~~ 163 (591)
T 3i3l_A 102 QAPWTFSFAAPKVAPWVFD-HAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDLS---------------DPDRVV 163 (591)
T ss_dssp CCCEEEECCCC--CTTCCS-CEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEECC---------------STTCEE
T ss_pred CccceeecccccccccccC-eeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEc---------------CCCEEE
Confidence 00 011111100 000 11235678899999999988888 89999999999872 145678
Q ss_pred EEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 130 VAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 130 v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
|++.++ +...++.+|.||.|+|..|
T Consensus 164 V~~~~~--G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 164 LTVRRG--GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEET--TEEEEEEESEEEECCGGGC
T ss_pred EEEecC--CceEEEEcCEEEECCCCcc
Confidence 888752 3334799999999999875
No 125
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.89 E-value=2.2e-09 Score=107.85 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=81.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc------C-c-cccC--------CC----------cCceeccCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI------G-G-IWKS--------CS----------YNSTKLQSHR 55 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~------G-G-~w~~--------~~----------~~~~~~~~~~ 55 (511)
.+||+|||||++|+++|..| .|++|+|+|+.+.. + | .+.. .. +.+.......
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 47999999999999999999 89999999997642 1 1 1110 00 0000000000
Q ss_pred CccccCCCC-CCCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEe
Q 010421 56 SDYEFTDFP-WPNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQT 134 (511)
Q Consensus 56 ~~~~~~~~~-~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 134 (511)
....+. ++ .............++.+.|.+.+.+.++ .++++++|++++.. +++.+.|++.+
T Consensus 82 ~~~~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~~---------------~~~~~~v~~~~ 143 (394)
T 1k0i_A 82 QRRRID-LKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHDL---------------QGERPYVTFER 143 (394)
T ss_dssp EEEEEC-HHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEECT---------------TSSSCEEEEEE
T ss_pred ceEEec-cccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEEe---------------cCCceEEEEec
Confidence 000000 00 0000011223567777888887777777 89999999999862 13457787733
Q ss_pred CCCCceeEEEeCEEEEeecccC
Q 010421 135 HNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 135 ~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
. ++..++.+|.||.|+|.+|
T Consensus 144 ~--g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 144 D--GERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp T--TEEEEEECSEEEECCCTTC
T ss_pred C--CcEEEEEeCEEEECCCCCc
Confidence 2 3334689999999999875
No 126
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.87 E-value=3.2e-09 Score=108.43 Aligned_cols=130 Identities=20% Similarity=0.259 Sum_probs=83.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC-----CcCce------eccC---CCCcc----cc---
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC-----SYNST------KLQS---HRSDY----EF--- 60 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~-----~~~~~------~~~~---~~~~~----~~--- 60 (511)
.+||+|||||++|+++|..| .|.+|+|+|+.+.+|+..... .+... .-.. +.... .+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 47999999999999999999 899999999988777532110 00000 0000 00000 00
Q ss_pred --------CCCCCCCC-CCCCCC---ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-
Q 010421 61 --------TDFPWPNR-DDPGFP---SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV- 127 (511)
Q Consensus 61 --------~~~~~~~~-~~~~~~---~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~- 127 (511)
...++... ....|+ ....+.+.|.+.+++.++ .++++++|+++... ++.
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~~----------------~~~v 167 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEYE----------------NGQT 167 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEE----------------TTEE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEec----------------CCcE
Confidence 00111000 001122 467888888888888888 89999999999873 333
Q ss_pred eEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 128 WEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 128 ~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
|.|.+.++. ++.+|.||+|||.++
T Consensus 168 ~~V~~~~G~-----~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 168 KAVILQTGE-----VLETNHVVIAVGGKS 191 (447)
T ss_dssp EEEEETTCC-----EEECSCEEECCCCSS
T ss_pred EEEEECCCC-----EEECCEEEECCCCCc
Confidence 777765442 689999999999873
No 127
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.86 E-value=9.5e-09 Score=104.69 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeee---EEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeCCCCceeEEEeCEEEEe
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNS---KVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTHNSNSIQRYGFEFLVVC 151 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~---~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vVlA 151 (511)
...+...+.+.+++.++ .+++++ +|+++... ++.++ |.+.++. ++.+|.||+|
T Consensus 160 ~~~~~~~L~~~a~~~Gv--~i~~~t~~~~V~~i~~~----------------~~~v~gV~t~~G~-----~i~Ad~VV~A 216 (438)
T 3dje_A 160 ARNALVAAAREAQRMGV--KFVTGTPQGRVVTLIFE----------------NNDVKGAVTADGK-----IWRAERTFLC 216 (438)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESTTTTCEEEEEEE----------------TTEEEEEEETTTE-----EEECSEEEEC
T ss_pred HHHHHHHHHHHHHhcCC--EEEeCCcCceEEEEEec----------------CCeEEEEEECCCC-----EEECCEEEEC
Confidence 45777888888888888 899999 99999873 45566 6665543 7899999999
Q ss_pred ecccC
Q 010421 152 TGKYG 156 (511)
Q Consensus 152 tG~~~ 156 (511)
+|.++
T Consensus 217 tG~~s 221 (438)
T 3dje_A 217 AGASA 221 (438)
T ss_dssp CGGGG
T ss_pred CCCCh
Confidence 99874
No 128
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.85 E-value=1.5e-08 Score=101.23 Aligned_cols=58 Identities=12% Similarity=0.021 Sum_probs=44.8
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEeCCCCceeEEEeCEEEEeec
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQTHNSNSIQRYGFEFLVVCTG 153 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vVlAtG 153 (511)
....+...+.+.+++.++ .++++++|++++.. ++.|. |.+.++ ++.+|.||+|+|
T Consensus 147 ~~~~l~~~l~~~~~~~Gv--~i~~~~~v~~i~~~----------------~~~v~gv~~~~g------~i~a~~VV~A~G 202 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGA--KLLEYTEVKGFLIE----------------NNEIKGVKTNKG------IIKTGIVVNATN 202 (382)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEES----------------SSBEEEEEETTE------EEECSEEEECCG
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCceEEEEEEE----------------CCEEEEEEECCc------EEECCEEEECcc
Confidence 456777888888888888 89999999999873 44565 554322 689999999999
Q ss_pred ccC
Q 010421 154 KYG 156 (511)
Q Consensus 154 ~~~ 156 (511)
..+
T Consensus 203 ~~s 205 (382)
T 1y56_B 203 AWA 205 (382)
T ss_dssp GGH
T ss_pred hhH
Confidence 863
No 129
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.85 E-value=1.1e-08 Score=107.80 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=85.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--c------CCCcEEEcCCCCcCccccC-C-C--------cCcee-----cc--------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R------HHNPVVFEASDSIGGIWKS-C-S--------YNSTK-----LQ-------- 52 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~------g~~v~v~e~~~~~GG~w~~-~-~--------~~~~~-----~~-------- 52 (511)
.+||+|||||++|+++|..| . |++|+|+||.+.+|+.... . . ++... +.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999 6 9999999998887753211 0 0 00000 00
Q ss_pred ---CCCCccccCCCCC--CCCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc
Q 010421 53 ---SHRSDYEFTDFPW--PNRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV 127 (511)
Q Consensus 53 ---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 127 (511)
.......++..|. ..........+.++.++|.+.+++.++ .++++++|+++...+ ++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~~~---------------~g~ 177 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILFHE---------------DGS 177 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEECT---------------TSS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC---------------CCC
Confidence 0000111111110 000012234678899999999988888 899999999998731 333
Q ss_pred e-EEEEEeC---CCCce-------eEEEeCEEEEeecccC
Q 010421 128 W-EVAVQTH---NSNSI-------QRYGFEFLVVCTGKYG 156 (511)
Q Consensus 128 ~-~v~~~~~---~~~~~-------~~~~~d~vVlAtG~~~ 156 (511)
. .|.+.+. .+++. .++.+|.||+|+|.+|
T Consensus 178 V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 178 VKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp EEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred EEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 3 2555430 11211 3789999999999874
No 130
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.84 E-value=4.4e-09 Score=104.86 Aligned_cols=58 Identities=19% Similarity=0.220 Sum_probs=44.9
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+...+.+.+++.|. .++++++|+++... ++.|.|++.++ ++.+|+||+|+|.
T Consensus 152 ~~~~~~~~l~~~a~~~Gv--~i~~~~~V~~i~~~----------------~~~~~V~t~~g------~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQG--QVLCNHEALEIRRV----------------DGAWEVRCDAG------SYRAAVLVNAAGA 207 (381)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEESSCCCCEEEEE----------------TTEEEEECSSE------EEEESEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEe----------------CCeEEEEeCCC------EEEcCEEEECCCh
Confidence 346677777778888888 89999999999873 34477765443 7899999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
++
T Consensus 208 ~s 209 (381)
T 3nyc_A 208 WC 209 (381)
T ss_dssp GH
T ss_pred hH
Confidence 63
No 131
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.83 E-value=1.2e-08 Score=101.53 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
...+.+.+.+.+++.++ .++++++|++++.. ++.|.|.+.++ ++.+|.||+|+|..
T Consensus 148 ~~~l~~~l~~~~~~~G~--~i~~~~~V~~i~~~----------------~~~~~v~~~~g------~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGC--AQLFNCPVTAIRHD----------------DDGVTIETADG------EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSCCEEEEEEC----------------SSSEEEEESSC------EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEc----------------CCEEEEEECCC------eEEcCEEEEcCCcc
Confidence 34677778788888888 88999999999873 34576655433 58999999999987
Q ss_pred C
Q 010421 156 G 156 (511)
Q Consensus 156 ~ 156 (511)
+
T Consensus 204 s 204 (372)
T 2uzz_A 204 V 204 (372)
T ss_dssp G
T ss_pred H
Confidence 4
No 132
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.82 E-value=9.3e-09 Score=102.66 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=45.7
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeec
Q 010421 74 PSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTG 153 (511)
Q Consensus 74 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG 153 (511)
....++.+.+.+.+++.++ .++++++|+++... ++.|.|.+.++ ++.+|.||+|+|
T Consensus 161 ~~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~~----------------~~~~~v~~~~g------~~~a~~vV~A~G 216 (382)
T 1ryi_A 161 VEPYFVCKAYVKAAKMLGA--EIFEHTPVLHVERD----------------GEALFIKTPSG------DVWANHVVVASG 216 (382)
T ss_dssp CCHHHHHHHHHHHHHHTTC--EEETTCCCCEEECS----------------SSSEEEEETTE------EEEEEEEEECCG
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEcCCcEEEEEEE----------------CCEEEEEcCCc------eEEcCEEEECCC
Confidence 4567788888888888888 88999999999862 45565654322 689999999999
Q ss_pred ccC
Q 010421 154 KYG 156 (511)
Q Consensus 154 ~~~ 156 (511)
..+
T Consensus 217 ~~s 219 (382)
T 1ryi_A 217 VWS 219 (382)
T ss_dssp GGT
T ss_pred hhH
Confidence 863
No 133
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.82 E-value=2.6e-08 Score=104.99 Aligned_cols=134 Identities=15% Similarity=0.164 Sum_probs=85.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceec------------cCCCCc------------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKL------------QSHRSD------------ 57 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~------------~~~~~~------------ 57 (511)
.+||+|||||++|+++|..| .|.+|+|+|+.+.+||..... -.++.. +++...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a-~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLA-AGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGC-CSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhc-CceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 47999999999999999999 899999999999888754321 000000 000000
Q ss_pred ------------------cccCCCCCCC-----C--CCC------CCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEE
Q 010421 58 ------------------YEFTDFPWPN-----R--DDP------GFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVR 106 (511)
Q Consensus 58 ------------------~~~~~~~~~~-----~--~~~------~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~ 106 (511)
+.-...++.. . ... ....+..+.+.|.+.+++.++ .++++++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeE
Confidence 0000111110 0 000 013457888899999988888 899999999998
Q ss_pred EcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 107 FTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
..+ +++ +-|.+.+. +++..++.+|.||+|||.++
T Consensus 283 ~~~---------------~g~v~Gv~~~~~-~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 283 KDD---------------KGTVKGILVKGM-YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp ECT---------------TSCEEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred EcC---------------CCeEEEEEEEeC-CCcEEEEECCeEEEeCCCcc
Confidence 731 233 23555542 24445789999999999874
No 134
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.81 E-value=2.8e-08 Score=104.25 Aligned_cols=64 Identities=11% Similarity=-0.024 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
...+...+...+.+.|. .++++++|+++...+ ++.|.|.+.+..+++..++.+|.||+|+|.+
T Consensus 169 ~~~l~~~L~~~a~~~G~--~i~~~~~V~~l~~~~---------------g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 169 DARLTLEIMKEAVARGA--VALNYMKVESFIYDQ---------------GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESEEEEEEEEET---------------TEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC---------------CeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 45566667777778888 899999999999831 3346688887555555689999999999987
Q ss_pred C
Q 010421 156 G 156 (511)
Q Consensus 156 ~ 156 (511)
+
T Consensus 232 s 232 (561)
T 3da1_A 232 V 232 (561)
T ss_dssp H
T ss_pred h
Confidence 3
No 135
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.79 E-value=3.3e-08 Score=104.06 Aligned_cols=135 Identities=23% Similarity=0.265 Sum_probs=84.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCC--Cc--Ccee------c-cC-----------------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSC--SY--NSTK------L-QS----------------- 53 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~--~~--~~~~------~-~~----------------- 53 (511)
.+||+|||||++|+++|..| .|.+|+|+|+.+.+||..... .. +... . ++
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 46999999999999999999 899999999998887643220 00 0000 0 00
Q ss_pred CCCc-------------cccCCCCC-----------CCCC--CCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEE
Q 010421 54 HRSD-------------YEFTDFPW-----------PNRD--DPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRF 107 (511)
Q Consensus 54 ~~~~-------------~~~~~~~~-----------~~~~--~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~ 107 (511)
+... +.-...++ +... .....++..+.+.|.+.+++.++ .++++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKLVV 278 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEEEE
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEE
Confidence 0000 00001111 1000 01113467888899999988888 8999999999987
Q ss_pred cCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 108 TGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
.+ +++ +-|.+.+. +++..++.+|.||+|||.++
T Consensus 279 ~~---------------~g~v~Gv~~~~~-~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 279 ND---------------DHSVVGAVVHGK-HTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp CT---------------TSBEEEEEEEET-TTEEEEEEEEEEEECCCCCT
T ss_pred CC---------------CCcEEEEEEEeC-CCcEEEEEcCEEEEecCCcc
Confidence 31 143 23555542 24444689999999999874
No 136
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.79 E-value=1.9e-08 Score=101.03 Aligned_cols=37 Identities=30% Similarity=0.483 Sum_probs=32.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI 37 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~ 37 (511)
|++.+||+|||||++|+++|..| .|++|+|+|+.+..
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 66668999999999999999999 89999999997654
No 137
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.77 E-value=8.8e-09 Score=107.43 Aligned_cols=166 Identities=12% Similarity=0.134 Sum_probs=98.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC-CcCccccCCCcCceeccCC----------CCc---------cccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD-SIGGIWKSCSYNSTKLQSH----------RSD---------YEFT 61 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~~~~~----------~~~---------~~~~ 61 (511)
.+||+|||||++|+.||..| .|.+|+|+|++. .+|+.. ..|....... ... ..|.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~---Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS---CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC---SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC---ccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 47999999999999999999 899999999974 444311 1111100000 000 0010
Q ss_pred CCCC---CCCC-CCCCCChHHHHHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeC
Q 010421 62 DFPW---PNRD-DPGFPSYTEILDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTH 135 (511)
Q Consensus 62 ~~~~---~~~~-~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~ 135 (511)
.... +... ......+..+.+.+.+.+++. ++ .+ ++++|+++... ++. +.|.+.++
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~e----------------~g~V~GV~t~dG 164 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIVK----------------NNQVVGVRTNLG 164 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEES----------------SSBEEEEEETTS
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEec----------------CCEEEEEEECCC
Confidence 0000 0000 001124567888888888774 66 56 68899998862 233 34555444
Q ss_pred CCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHHH
Q 010421 136 NSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAKE 215 (511)
Q Consensus 136 ~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~~ 215 (511)
. .+.+|.||+|||.+ ++.+.++ |...+ .+.+ + |+.++.+++..
T Consensus 165 ~-----~i~AdaVVLATG~~---s~~~~~~---G~~~~----------------------~~Gr---~-G~~~A~~la~~ 207 (637)
T 2zxi_A 165 V-----EYKTKAVVVTTGTF---LNGVIYI---GDKMI----------------------PGGR---L-GEPRSEGLSDF 207 (637)
T ss_dssp C-----EEECSEEEECCTTC---BTCEEEE---TTEEE----------------------ECSB---T-TBCCBCTHHHH
T ss_pred c-----EEEeCEEEEccCCC---ccCceec---cceec----------------------CCCC---C-CchhHHHHHHH
Confidence 3 79999999999965 3444444 43321 1122 2 35788999999
Q ss_pred HHHhcCCCCCCcEEEEEe
Q 010421 216 CAESNQGPEGQPCTMIVR 233 (511)
Q Consensus 216 l~~~~~~~~~~~Vtl~~R 233 (511)
|.+.+.. ++.+.+
T Consensus 208 L~~lG~~-----v~~l~t 220 (637)
T 2zxi_A 208 YRRFDFP-----LIRFKT 220 (637)
T ss_dssp HHHTTCC-----CEEEEE
T ss_pred HHhcCCc-----eEEecC
Confidence 9988764 666654
No 138
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.75 E-value=3.2e-08 Score=98.99 Aligned_cols=56 Identities=13% Similarity=0.170 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
...+...+.+.+++.++ .++++++|++++.. ++.|.|.+.++ ++.+|.||+|+|..
T Consensus 149 ~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~g------~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 149 SENCIRAYRELAEARGA--KVLTHTRVEDFDIS----------------PDSVKIETANG------SYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHHHHHHHHTTC--EEECSCCEEEEEEC----------------SSCEEEEETTE------EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCC--EEEcCcEEEEEEec----------------CCeEEEEeCCC------EEEeCEEEEecCcc
Confidence 36777888888888888 89999999999873 34566654322 68999999999976
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.75 E-value=1e-07 Score=102.73 Aligned_cols=60 Identities=8% Similarity=0.195 Sum_probs=45.3
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+...+.+.+++.|+ .++++++|+++... ++.|.|.+.++. .++.+|.||+|+|.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~~----------------~~~v~V~t~~G~----~~i~Ad~VVlAtG~ 467 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGM--TCHYQHELQRLKRI----------------DSQWQLTFGQSQ----AAKHHATVILATGH 467 (689)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEESCCEEEEEEC----------------SSSEEEEEC-CC----CCEEESEEEECCGG
T ss_pred CHHHHHHHHHHHHHhCCC--EEEeCCeEeEEEEe----------------CCeEEEEeCCCc----EEEECCEEEECCCc
Confidence 345677777777888888 89999999999983 445877765542 14789999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
.+
T Consensus 468 ~s 469 (689)
T 3pvc_A 468 RL 469 (689)
T ss_dssp GT
T ss_pred ch
Confidence 74
No 140
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.72 E-value=7.2e-08 Score=102.84 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=86.9
Q ss_pred CCeEEEECCCHHHHHHHHhc-c--CCCcEEEcCCCCcCccccCC------------------------CcCceeccCC--
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-R--HHNPVVFEASDSIGGIWKSC------------------------SYNSTKLQSH-- 54 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~--g~~v~v~e~~~~~GG~w~~~------------------------~~~~~~~~~~-- 54 (511)
.+||+|||||++||++|..| . |++|+|+|+.+.++...... .........+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 47999999999999999999 5 89999999987654322110 0000000000
Q ss_pred ---CCccc---cCCCCCC-CCCCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc
Q 010421 55 ---RSDYE---FTDFPWP-NRDDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV 127 (511)
Q Consensus 55 ---~~~~~---~~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~ 127 (511)
..... +...... ............+.++|.+.+++.+..-.++++++|++++...+. +...
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~------------~~~~ 179 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGA------------ADYP 179 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTC------------SSCC
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCC------------CcCC
Confidence 00000 1100000 000112356788999999999888643368999999999983110 0235
Q ss_pred eEEEEEeC---CCCceeEEEeCEEEEeecccC
Q 010421 128 WEVAVQTH---NSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 128 ~~v~~~~~---~~~~~~~~~~d~vVlAtG~~~ 156 (511)
++|++++. .++...++.+|+||.|+|.+|
T Consensus 180 v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 180 VTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp EEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred EEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 77877751 123344799999999999885
No 141
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.70 E-value=2.7e-08 Score=104.20 Aligned_cols=168 Identities=11% Similarity=0.127 Sum_probs=97.1
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC-CcCccccCCCcCceecc----------CCCCc---------ccc
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD-SIGGIWKSCSYNSTKLQ----------SHRSD---------YEF 60 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~-~~GG~w~~~~~~~~~~~----------~~~~~---------~~~ 60 (511)
..+||+|||||++|++||..| .|.+|+|+|++. .+|+.+.. |..... .-... ..|
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~---ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN---PAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC---SEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc---cchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 358999999999999999999 899999999975 45553321 111000 00000 011
Q ss_pred CCCC---CCCCC-CCCCCChHHHHHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceE-EEEEe
Q 010421 61 TDFP---WPNRD-DPGFPSYTEILDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWE-VAVQT 134 (511)
Q Consensus 61 ~~~~---~~~~~-~~~~~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~ 134 (511)
.... -+... .........+...+.+.++++ ++ .+ ++.+|+.+... ++... |.+.+
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~d----------------~g~V~GV~t~~ 157 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSAN----------------SGKFSSVTVRS 157 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEEE----------------TTEEEEEEETT
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEec----------------CCEEEEEEECC
Confidence 0000 00000 001234567788888888775 66 45 56789888762 33333 54444
Q ss_pred CCCCceeEEEeCEEEEeecccCCCCCCCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCCCCHHHHHH
Q 010421 135 HNSNSIQRYGFEFLVVCTGKYGDVPIIPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFKKSAIDLAK 214 (511)
Q Consensus 135 ~~~~~~~~~~~d~vVlAtG~~~~~p~~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G~sg~d~a~ 214 (511)
+. .+.||.||+|||.++ +.+.++ |...+ .+.+++ | +.++++++.
T Consensus 158 G~-----~i~Ad~VVLATG~~s---~~~i~~---G~~~~----------------------~~g~~v--G-~~~a~~la~ 201 (641)
T 3cp8_A 158 GR-----AIQAKAAILACGTFL---NGLIHI---GMDHF----------------------PGGRST--A-EPPVEGLTE 201 (641)
T ss_dssp SC-----EEEEEEEEECCTTCB---TCEEEE---TTEEE----------------------ECSSST--T-SCCBCSHHH
T ss_pred Cc-----EEEeCEEEECcCCCC---Ccccee---eeeee----------------------cccccc--C-CchhhhhHH
Confidence 32 799999999999652 222222 22111 111221 3 577888998
Q ss_pred HHHHhcCCCCCCcEEEEEe
Q 010421 215 ECAESNQGPEGQPCTMIVR 233 (511)
Q Consensus 215 ~l~~~~~~~~~~~Vtl~~R 233 (511)
.|.+.+.. |..+..
T Consensus 202 ~L~~~G~k-----v~~l~t 215 (641)
T 3cp8_A 202 SLASLGFS-----FGRLKT 215 (641)
T ss_dssp HHHHTTCC-----EEEEEE
T ss_pred HHHhCCce-----EEeecC
Confidence 89888764 766543
No 142
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.70 E-value=3.5e-08 Score=99.34 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI 37 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~ 37 (511)
.+|+||||||+||++|..| .|++|+||||.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4899999999999999999 99999999997654
No 143
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.68 E-value=4e-08 Score=90.93 Aligned_cols=33 Identities=18% Similarity=0.132 Sum_probs=29.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+++|..|++.+.+ |+++.+..
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~-----v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVR-----VGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-----EEEEecCC
Confidence 4799999999999999999998765 99999873
No 144
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.68 E-value=1.2e-07 Score=98.26 Aligned_cols=64 Identities=13% Similarity=0.086 Sum_probs=48.9
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+...+...+.+.|. .++++++|+++... ++.|.|.+.+..+++..++.+|.||+|+|.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv--~i~~~~~V~~l~~~----------------~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~ 208 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGG--EVLTRTRATSARRE----------------NGLWIVEAEDIDTGKKYSWQARGLVNATGP 208 (501)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSEEEEEEEEE----------------TTEEEEEEEETTTCCEEEEEESCEEECCGG
T ss_pred cHHHHHHHHHHHHHHcCC--EEEcCcEEEEEEEe----------------CCEEEEEEEECCCCCEEEEECCEEEECCCh
Confidence 345667777777778888 89999999999873 356788887643444457899999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
++
T Consensus 209 ~s 210 (501)
T 2qcu_A 209 WV 210 (501)
T ss_dssp GH
T ss_pred hH
Confidence 74
No 145
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.66 E-value=2.5e-07 Score=97.38 Aligned_cols=134 Identities=18% Similarity=0.159 Sum_probs=84.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCcee-----------c-cCCCCcc-----------
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTK-----------L-QSHRSDY----------- 58 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~-----------~-~~~~~~~----------- 58 (511)
.+||+|||+|++|+++|..| .|.+|+|+|+.+.+||..... -.++. . +++...+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a-~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLA-AGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGC-CSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhh-CCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999 799999999999888754321 00000 0 0000000
Q ss_pred -------------------ccCCCCCC-----CC--CCC------CCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEE
Q 010421 59 -------------------EFTDFPWP-----NR--DDP------GFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVR 106 (511)
Q Consensus 59 -------------------~~~~~~~~-----~~--~~~------~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~ 106 (511)
.-...++. .. ... ....+..+...|.+.+++.++ .++++++|+++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~ 282 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRIL 282 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEE
Confidence 00011111 00 000 112367888899999988888 899999999998
Q ss_pred EcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 107 FTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
..+ +++ +-|.+.+. +++..++.+|.||+|||.++
T Consensus 283 ~~~---------------~g~v~GV~~~~~-~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 283 EDA---------------SGKVTGVLVKGE-YTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp EC-----------------CCEEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred ECC---------------CCeEEEEEEEeC-CCcEEEEEcCEEEEeCCCCc
Confidence 621 133 33555542 24445689999999999763
No 146
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.65 E-value=1.7e-08 Score=97.77 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=60.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCc-cccCC-CcCceeccCCCCcccc--CCCCCCCCC-CCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGG-IWKSC-SYNSTKLQSHRSDYEF--TDFPWPNRD-DPGFP 74 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG-~w~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~ 74 (511)
.+||+|||||++|+++|..| . |++|+|+|+...+|| .|... .+....+. +.....+ ...++.... .....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR-KPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE-TTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc-hHHHHHHHHcCCcccccCCeEEEe
Confidence 47999999999999999999 4 999999999988774 45331 22222221 1111000 111221100 00011
Q ss_pred ChHHHHHHHHHHHHh-cCCCCceEeeeEEEEEEEc
Q 010421 75 SYTEILDYLESYAKH-FDVFKCVRFNSKVVEVRFT 108 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~ 108 (511)
...++.+.|...+.. .++ .++++++|+++...
T Consensus 158 ~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~ 190 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNV--KLFNATTVEDLITR 190 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEec
Confidence 245555666666655 366 78889999988763
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.62 E-value=1.8e-07 Score=93.95 Aligned_cols=59 Identities=12% Similarity=-0.014 Sum_probs=44.4
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
....+...+.+.+++.++ .++++++|+++...+ +..|.|.+.++ ++.+|.||+|+|.
T Consensus 172 ~~~~~~~~l~~~~~~~g~--~i~~~~~v~~i~~~~---------------~~~~~v~~~~g------~~~a~~vV~a~G~ 228 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGV--DIIQNCEVTGFIKDG---------------EKVTGVKTTRG------TIHAGKVALAGAG 228 (405)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEESS---------------SBEEEEEETTC------CEEEEEEEECCGG
T ss_pred CHHHHHHHHHHHHHHCCC--EEEcCCeEEEEEEeC---------------CEEEEEEeCCc------eEECCEEEECCch
Confidence 455777888888888888 899999999998731 33355655332 6899999999998
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
.+
T Consensus 229 ~s 230 (405)
T 2gag_B 229 HS 230 (405)
T ss_dssp GH
T ss_pred hH
Confidence 63
No 148
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.61 E-value=3e-08 Score=93.65 Aligned_cols=45 Identities=36% Similarity=0.530 Sum_probs=39.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNS 48 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~ 48 (511)
.+||+||||||+||+||..| .|++|+||||++.+||.+.....++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~ 48 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDA 48 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCC
Confidence 48999999999999999999 9999999999999999876533333
No 149
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.59 E-value=1e-07 Score=97.85 Aligned_cols=41 Identities=34% Similarity=0.519 Sum_probs=34.8
Q ss_pred CC-CCCeEEEECCCHHHHHHHHhc--cC------CCcEEEcCCCCcCccc
Q 010421 1 MA-NYSKIAIIGAGVSGLAAVKQL--RH------HNPVVFEASDSIGGIW 41 (511)
Q Consensus 1 m~-~~~~v~IIGaG~aGl~aa~~l--~g------~~v~v~e~~~~~GG~w 41 (511)
|+ +.+||+|||||++||+||..| .| ++|+|+|+++.+||..
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 54 347999999999999999999 77 8999999999998743
No 150
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.58 E-value=4.6e-07 Score=94.01 Aligned_cols=37 Identities=24% Similarity=0.460 Sum_probs=34.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGI 40 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~ 40 (511)
.+||+|||||++|+++|..| .|.+|+|+||.+.+||.
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 47999999999999999999 89999999999888764
No 151
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.58 E-value=1.5e-07 Score=103.55 Aligned_cols=36 Identities=36% Similarity=0.537 Sum_probs=31.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASDS 36 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~~ 36 (511)
|++.+||+|||||++|+++|.+| .|. +|+|+|++..
T Consensus 1 m~~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 1 MASTPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 66778999999999999999999 888 9999999875
No 152
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.58 E-value=2.4e-07 Score=94.00 Aligned_cols=38 Identities=26% Similarity=0.506 Sum_probs=35.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcccc
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWK 42 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~ 42 (511)
+||+|||||++|++||..| .|++|+|+|+++.+||...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 6999999999999999999 8999999999999998654
No 153
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.57 E-value=8.1e-08 Score=97.25 Aligned_cols=39 Identities=36% Similarity=0.589 Sum_probs=35.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+||+|||||++||++|..| .|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 4899999999999999999 89999999999999986543
No 154
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.53 E-value=6.7e-07 Score=95.63 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=85.4
Q ss_pred CCeEEEECCCHHHHHHHHhc-c------CCCcEEEcCCCCcCccccC------------------------CCcCceecc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-R------HHNPVVFEASDSIGGIWKS------------------------CSYNSTKLQ 52 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~------g~~v~v~e~~~~~GG~w~~------------------------~~~~~~~~~ 52 (511)
.+||+||||||+||++|..| . |++|+|||+.+.....-.. ..+......
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 46899999999999999999 6 8999999997653211000 001111110
Q ss_pred CCC---Ccc---ccCCCCCC-CCCCCCCCChHHHHHHHHHHHHhcC---CCCceEeeeEEEEEEEcCCCCcccCCCCCCC
Q 010421 53 SHR---SDY---EFTDFPWP-NRDDPGFPSYTEILDYLESYAKHFD---VFKCVRFNSKVVEVRFTGSLETTDSGGNLLP 122 (511)
Q Consensus 53 ~~~---~~~---~~~~~~~~-~~~~~~~~~~~~~~~yl~~~~~~~~---~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~ 122 (511)
.+. ... .+.+.... ............+.++|.+.+++.+ + .++++++|++++...... . .
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~d~~~~--~-----~- 157 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEIDSSKA--E-----D- 157 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEECGGGT--T-----C-
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEecCccc--c-----c-
Confidence 000 000 01110000 0001223567888899998888876 5 799999999998731000 0 0
Q ss_pred CCCCceEEEEEeC---------------------------------------CCCceeEEEeCEEEEeecccC
Q 010421 123 AGHPVWEVAVQTH---------------------------------------NSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 123 ~~~~~~~v~~~~~---------------------------------------~~~~~~~~~~d~vVlAtG~~~ 156 (511)
......+|++.+. .++...++.+|+||-|.|.+|
T Consensus 158 ~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S 230 (665)
T 1pn0_A 158 PEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHS 230 (665)
T ss_dssp TTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTC
T ss_pred CCCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCC
Confidence 0023467776652 224345799999999999986
No 155
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.52 E-value=1.7e-07 Score=94.92 Aligned_cols=38 Identities=37% Similarity=0.578 Sum_probs=34.9
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcccc
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWK 42 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~ 42 (511)
+||+|||||++||+||..| .|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999 8999999999999988654
No 156
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.49 E-value=3.3e-07 Score=93.75 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=73.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|++|+.+|..| .|.+|+++|+.+.+. +. ...++.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--------------------------------~~--~~~~~~~ 212 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--------------------------------PT--MDLEVSR 212 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 889999999976531 10 1256777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.+++.++ .++++++|++++.. ++.+.+.+.++. ++.+|.||+|+|..
T Consensus 213 ~l~~~l~~~Gv--~i~~~~~V~~i~~~----------------~~~v~v~~~~g~-----~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 213 AAERVFKKQGL--TIRTGVRVTAVVPE----------------AKGARVELEGGE-----VLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEEE----------------TTEEEEEETTSC-----EEEESEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEECCEEEEEEEe----------------CCEEEEEECCCe-----EEEcCEEEECcCCC
Confidence 78888888888 89999999999873 333455554432 78999999999954
No 157
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.49 E-value=1.4e-07 Score=94.93 Aligned_cols=34 Identities=26% Similarity=0.247 Sum_probs=30.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~ 37 (511)
.+||+|||||++|+++|..| . |++|+|+|+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 37999999999999999999 6 9999999997543
No 158
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.48 E-value=1.9e-07 Score=97.75 Aligned_cols=59 Identities=19% Similarity=0.356 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEeec
Q 010421 75 SYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVCTG 153 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlAtG 153 (511)
.+.++..+|.+.+++.++ .++++ +|+++.... ++ .+.|.+.++. ++.+|.||.|+|
T Consensus 163 ~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~---------------~g~~~~v~~~~g~-----~i~ad~vV~A~G 219 (538)
T 2aqj_A 163 DAHLVADFLKRWAVERGV--NRVVD-EVVDVRLNN---------------RGYISNLLTKEGR-----TLEADLFIDCSG 219 (538)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT---------------TSCEEEEEETTSC-----EECCSEEEECCG
T ss_pred eHHHHHHHHHHHHHHCCC--EEEEe-eEeEEEEcC---------------CCcEEEEEECCCc-----EEEeCEEEECCC
Confidence 457888899999988888 78888 899998721 22 2455554432 789999999999
Q ss_pred ccC
Q 010421 154 KYG 156 (511)
Q Consensus 154 ~~~ 156 (511)
..|
T Consensus 220 ~~s 222 (538)
T 2aqj_A 220 MRG 222 (538)
T ss_dssp GGC
T ss_pred Cch
Confidence 875
No 159
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.48 E-value=4e-07 Score=87.66 Aligned_cols=102 Identities=18% Similarity=0.236 Sum_probs=61.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcC-ccccCC-CcCceeccCCC-CccccCCCCCCCCCCCC--CC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIG-GIWKSC-SYNSTKLQSHR-SDYEFTDFPWPNRDDPG--FP 74 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~G-G~w~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~ 74 (511)
.+||+|||||++|+++|..| . |++|+|+|+.+.+| |.|... .+....+.... ..+.-...++... ... ..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~-g~~~~~~ 143 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDE-GDYVVVK 143 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEEC-SSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccC-CCeEEEc
Confidence 35999999999999999999 5 99999999998887 455321 12222111100 0000111122111 011 11
Q ss_pred ChHHHHHHHHHHHHhc-CCCCceEeeeEEEEEEEc
Q 010421 75 SYTEILDYLESYAKHF-DVFKCVRFNSKVVEVRFT 108 (511)
Q Consensus 75 ~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~ 108 (511)
...++...+.+.+... ++ .++.+++|+++...
T Consensus 144 ~~~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~~ 176 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNV--KLFNATCVEDLVTR 176 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTE--EEETTEEEEEEEEC
T ss_pred chHHHHHHHHHHHHHhcCc--EEEecceeeeeeec
Confidence 3456666666666554 66 77888999999873
No 160
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.46 E-value=9.9e-07 Score=92.66 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 77 TEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 77 ~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
..+...+...+.+.|. .+.++++|+++...+ +..|.|.+.+..+++..++.+|.||+|+|.++
T Consensus 188 ~~l~~~l~~~a~~~Ga--~i~~~t~V~~l~~~~---------------~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGA--YLVSKMKAVGFLYEG---------------DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTC--EEESSEEEEEEEEET---------------TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCC--eEEeccEEEEEEEeC---------------CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 3444445566677787 889999999998731 33466777764334444689999999999874
No 161
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.46 E-value=1.8e-06 Score=88.75 Aligned_cols=106 Identities=23% Similarity=0.347 Sum_probs=79.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+.. . ...++.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~--~~~~~~~ 228 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA--------------------------------S--MDGEVAK 228 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS--------------------------------S--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc--------------------------------c--cCHHHHH
Confidence 46899999999999999999 8999999999865421 1 1256778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++... .++.+.|.+.+..++...++.+|.||+|+|. .|+.
T Consensus 229 ~l~~~l~~~gv--~i~~~~~v~~i~~~~--------------~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~---~p~~ 289 (478)
T 1v59_A 229 ATQKFLKKQGL--DFKLSTKVISAKRND--------------DKNVVEIVVEDTKTNKQENLEAEVLLVAVGR---RPYI 289 (478)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEEET--------------TTTEEEEEEEETTTTEEEEEEESEEEECSCE---EECC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEec--------------CCCeEEEEEEEcCCCCceEEECCEEEECCCC---CcCC
Confidence 88888888899 899999999998620 0334567666322222337899999999995 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 290 ~ 290 (478)
T 1v59_A 290 A 290 (478)
T ss_dssp T
T ss_pred C
Confidence 4
No 162
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.43 E-value=1.7e-07 Score=92.49 Aligned_cols=91 Identities=19% Similarity=0.243 Sum_probs=57.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC-CCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS-DSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~-~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
..+||+|||||++||++|..| .|++|+|+|++ +.+||.|.....+. +.+.. +....+.+... ...+ ...
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---~~~~~-~~~~~~~~e~G-~~~~---~~~ 114 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---GEPSP-FADPAQYAEAG-AMRL---PSF 114 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---TSCCS-SSSTTCCEESS-CCCE---ETT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---ccccc-ccCCCcEEecC-ceee---cch
Confidence 457999999999999999999 89999999999 99999887522111 11110 00001111000 0111 123
Q ss_pred HHHHHHHHHhcCCCCceEeeeE
Q 010421 80 LDYLESYAKHFDVFKCVRFNSK 101 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~ 101 (511)
..++.++++++++...+.++..
T Consensus 115 ~~~~~~~~~~lGl~~~~~~~~~ 136 (376)
T 2e1m_A 115 HPLTLALIDKLGLKRRLFFNVD 136 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHHHHHHHcCCCcceeeccc
Confidence 4577788899998655555544
No 163
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.43 E-value=2.7e-06 Score=89.55 Aligned_cols=64 Identities=11% Similarity=0.021 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
+..+...|.+.+.+.++ .++++++|+++.... ++ .+-|.+.+..+++...+.++.||+|||.
T Consensus 142 g~~l~~~L~~~~~~~gv--~i~~~~~v~~L~~~~---------------~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHT--TIFSEWYALDLVKNQ---------------DGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEETEEEEEEEECT---------------TSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCC--EEEeCcEEEEEEECC---------------CCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 46777888888888888 899999999998721 22 2345555433455557899999999997
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
++
T Consensus 205 ~~ 206 (588)
T 2wdq_A 205 AG 206 (588)
T ss_dssp CG
T ss_pred Cc
Confidence 63
No 164
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.43 E-value=2.9e-06 Score=87.71 Aligned_cols=100 Identities=17% Similarity=0.292 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -.+++.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 221 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--------------------------------RK--FDESVIN 221 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--------------------------------cc--cchhhHH
Confidence 46899999999999999999 889999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeE-EEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQR-YGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~d~vVlAtG~~~~~p~ 160 (511)
++.+..++.++ .++++++|++++... ++...|.+.++. + +.+|.||+|+|. .|+
T Consensus 222 ~l~~~l~~~gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~g~-----~~~~~D~vi~a~G~---~p~ 276 (500)
T 1onf_A 222 VLENDMKKNNI--NIVTFADVVEIKKVS---------------DKNLSIHLSDGR-----IYEHFDHVIYCVGR---SPD 276 (500)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEESS---------------TTCEEEEETTSC-----EEEEESEEEECCCB---CCT
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEEcC---------------CceEEEEECCCc-----EEEECCEEEECCCC---CcC
Confidence 88888888899 899999999998721 234566665443 4 899999999994 566
Q ss_pred CC
Q 010421 161 IP 162 (511)
Q Consensus 161 ~p 162 (511)
..
T Consensus 277 ~~ 278 (500)
T 1onf_A 277 TE 278 (500)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.43 E-value=1.3e-06 Score=92.32 Aligned_cols=63 Identities=13% Similarity=0.071 Sum_probs=44.4
Q ss_pred hHHHHHHHHHHHHhcC-CCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeec
Q 010421 76 YTEILDYLESYAKHFD-VFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTG 153 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG 153 (511)
+..+...|.+.+.+.+ + .+.++++|+++... +++ +-|.+.+..+++...+.++.||+|||
T Consensus 133 g~~l~~~L~~~~~~~gnv--~i~~~~~v~~l~~~----------------~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 194 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQI--QRFDEHFVLDILVD----------------DGHVRGLVAMNMMEGTLVQIRANAVVMATG 194 (602)
T ss_dssp HHHHHHHHHHHHTTCTTE--EEEETEEEEEEEEE----------------TTEEEEEEEEETTTTEEEEEECSCEEECCC
T ss_pred HHHHHHHHHHHHHhCCCc--EEEeCCEEEEEEEe----------------CCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 4677777777777776 6 78899999999873 222 22444443345555789999999999
Q ss_pred ccC
Q 010421 154 KYG 156 (511)
Q Consensus 154 ~~~ 156 (511)
.++
T Consensus 195 g~s 197 (602)
T 1kf6_A 195 GAG 197 (602)
T ss_dssp CCG
T ss_pred CCc
Confidence 874
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.42 E-value=1.4e-06 Score=89.17 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=78.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||||+.|+.+|..| .|.+|+|+|+.+.+. +. ..+++.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 214 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL--------------------------------PQ--GDPETAA 214 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 47899999999999999999 899999999976541 10 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++.. ++...|++.+..+++..++.+|.||+|+|. .|+.
T Consensus 215 ~l~~~l~~~gV--~i~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~---~p~~ 273 (464)
T 2eq6_A 215 LLRRALEKEGI--RVRTKTKAVGYEKK----------------KDGLHVRLEPAEGGEGEEVVVDKVLVAVGR---KPRT 273 (464)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEEE----------------TTEEEEEEEETTCCSCEEEEESEEEECSCE---EESC
T ss_pred HHHHHHHhcCC--EEEcCCEEEEEEEe----------------CCEEEEEEeecCCCceeEEEcCEEEECCCc---ccCC
Confidence 88888888898 89999999999873 334566665221123346899999999995 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
+
T Consensus 274 ~ 274 (464)
T 2eq6_A 274 E 274 (464)
T ss_dssp T
T ss_pred C
Confidence 4
No 167
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.42 E-value=9.4e-07 Score=90.55 Aligned_cols=170 Identities=15% Similarity=0.087 Sum_probs=89.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCcCccccCCCcCce--eccCCCCccccCCCCCCC-------CCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSIGGIWKSCSYNST--KLQSHRSDYEFTDFPWPN-------RDD 70 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~GG~w~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~~~ 70 (511)
.++|+|||+|.+|+.+|..| . +.+|+++++++.+-- .. .... ..-.|...-.|..++... ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p--~~--~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP--AD--DSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB--CC--CCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC--cc--CCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 57899999999999999999 4 789999999765410 00 0000 000000000000000000 000
Q ss_pred --CCCCChH---HHHH--HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEE
Q 010421 71 --PGFPSYT---EILD--YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRY 143 (511)
Q Consensus 71 --~~~~~~~---~~~~--yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 143 (511)
..-.... ++.+ |.+.+....++ .++++++|++++.. ++.|.|++++..+++..++
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~----------------~~~~~v~~~~~~~g~~~~~ 364 (463)
T 3s5w_A 303 TNYSVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATAT----------------AQGIELALRDAGSGELSVE 364 (463)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEE----------------TTEEEEEEEETTTCCEEEE
T ss_pred cCCCcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEec----------------CCEEEEEEEEcCCCCeEEE
Confidence 0000111 1110 11111112355 78899999999873 5668899987655665679
Q ss_pred EeCEEEEeecccCCCCC--CCCCCCCCCCCcccceEEeccccCccchhhhhhccCCCcEEEECCC
Q 010421 144 GFEFLVVCTGKYGDVPI--IPAFPNNKGPEVFEGQVLHSIDYCKLDKEAASQLLKDKKVAVVGFK 206 (511)
Q Consensus 144 ~~d~vVlAtG~~~~~p~--~p~~~~~~g~~~~~g~~~hs~~~~~~~~~~~~~~~~~k~V~VvG~G 206 (511)
.+|.||+|||.. |+ .+-+. ++....|.+....+++... ......+|-++|..
T Consensus 365 ~~D~Vv~AtG~~---p~~~~~~l~---~l~~~~g~i~v~~~~~~~~-----~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 365 TYDAVILATGYE---RQLHRQLLE---PLAEYLGDHEIGRDYRLQT-----DERCKVAIYAQGFS 418 (463)
T ss_dssp EESEEEECCCEE---CCC-CTTTG---GGGGGBC--CCCTTSBCCB-----CTTBCSEEEESSCC
T ss_pred ECCEEEEeeCCC---CCCccchhH---HHHHHhCCcccCccccccc-----CCCCCCeEEEcCCC
Confidence 999999999965 44 33233 3222225555555554311 11124568888863
No 168
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.42 E-value=9.8e-07 Score=88.08 Aligned_cols=96 Identities=13% Similarity=0.180 Sum_probs=75.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. ..+ ...++.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~--------------------------------~~~-~~~~~~~ 191 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVM--------------------------------PGL-LHPAAAK 191 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TTT-SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchh--------------------------------hcc-cCHHHHH
Confidence 57899999999999999999 899999999976541 111 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|.+++.. ++.+.|.+.++. ++.+|.||+|+|..
T Consensus 192 ~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~g~-----~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 192 AVQAGLEGLGV--RFHLGPVLASLKKA----------------GEGLEAHLSDGE-----VIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHTTTC--EEEESCCEEEEEEE----------------TTEEEEEETTSC-----EEEESEEEECSCEE
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEec----------------CCEEEEEECCCC-----EEECCEEEECcCCC
Confidence 88888888888 89999999999873 334566665543 78999999999954
No 169
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.41 E-value=7.8e-07 Score=91.25 Aligned_cols=34 Identities=32% Similarity=0.448 Sum_probs=30.5
Q ss_pred eEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCcc
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGI 40 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~ 40 (511)
||+|||||++|+++|..| .|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 799999999999999999 89999999998 55553
No 170
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.38 E-value=1.9e-06 Score=91.01 Aligned_cols=63 Identities=17% Similarity=0.228 Sum_probs=45.7
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
+..+...|.+.+.+.++ .++++++|+++... +++ .-|.+.+..+++...+.++.||+|||.
T Consensus 154 G~~l~~~L~~~~~~~gv--~i~~~~~v~~Li~~----------------~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDT--SYFVEYFALDLLME----------------NGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHHTTSCC--EEEETEEEEEEEEE----------------TTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCC--EEEEceEEEEEEEE----------------CCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 55777778887877787 89999999999862 232 234555433455567899999999997
Q ss_pred cC
Q 010421 155 YG 156 (511)
Q Consensus 155 ~~ 156 (511)
++
T Consensus 216 ~~ 217 (621)
T 2h88_A 216 YG 217 (621)
T ss_dssp CG
T ss_pred cc
Confidence 63
No 171
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.38 E-value=7.8e-07 Score=92.76 Aligned_cols=36 Identities=28% Similarity=0.520 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHhc-cCCCcEEEcCCCCcCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-RHHNPVVFEASDSIGG 39 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~g~~v~v~e~~~~~GG 39 (511)
.+||+|||||++|+++|..| .|.+|+|+||....+|
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTTTSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhcCCcEEEEECCCCCCC
Confidence 47999999999999999999 8899999999877654
No 172
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.36 E-value=1.4e-06 Score=90.71 Aligned_cols=60 Identities=12% Similarity=0.174 Sum_probs=44.2
Q ss_pred CChHHHHHHHHHHHHh-cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEe
Q 010421 74 PSYTEILDYLESYAKH-FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVC 151 (511)
Q Consensus 74 ~~~~~~~~yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlA 151 (511)
..+..+.++|.+.+++ .++ .++++ +|++++... ++ ...|.+.++. ++.+|.||.|
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~~~---------------~g~~~~v~~~~g~-----~i~ad~vV~A 228 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGV--THIRD-HVSQIINNQ---------------HGDIEKLITKQNG-----EISGQLFIDC 228 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEECT---------------TSCEEEEEESSSC-----EEECSEEEEC
T ss_pred EcHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEecC---------------CCcEEEEEECCCC-----EEEcCEEEEC
Confidence 3577888999999988 888 78888 699998721 22 1244444332 6899999999
Q ss_pred ecccC
Q 010421 152 TGKYG 156 (511)
Q Consensus 152 tG~~~ 156 (511)
+|..|
T Consensus 229 dG~~S 233 (526)
T 2pyx_A 229 TGAKS 233 (526)
T ss_dssp SGGGC
T ss_pred CCcch
Confidence 99875
No 173
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.35 E-value=1.4e-06 Score=88.79 Aligned_cols=100 Identities=16% Similarity=0.127 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. -..++.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 212 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL--------------------------------PS--FDPMISE 212 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh--------------------------------hh--hhHHHHH
Confidence 46899999999999999999 899999999976541 11 1246777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++... ++...|++.++. ++.+|.||+|+|. .|+.
T Consensus 213 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~g~-----~i~~D~vv~a~G~---~p~~ 267 (450)
T 1ges_A 213 TLVEVMNAEGP--QLHTNAIPKAVVKNT---------------DGSLTLELEDGR-----SETVDCLIWAIGR---EPAN 267 (450)
T ss_dssp HHHHHHHHHSC--EEECSCCEEEEEECT---------------TSCEEEEETTSC-----EEEESEEEECSCE---EESC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEeC---------------CcEEEEEECCCc-----EEEcCEEEECCCC---CcCC
Confidence 88888888898 899999999998721 334567665543 7899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 268 ~ 268 (450)
T 1ges_A 268 D 268 (450)
T ss_dssp T
T ss_pred C
Confidence 3
No 174
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.35 E-value=1.3e-07 Score=94.43 Aligned_cols=118 Identities=19% Similarity=0.156 Sum_probs=73.0
Q ss_pred CeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCCCc---Ccccc--CCCcC-----cee----c---cCCCCcccc--C
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASDSI---GGIWK--SCSYN-----STK----L---QSHRSDYEF--T 61 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~~~---GG~w~--~~~~~-----~~~----~---~~~~~~~~~--~ 61 (511)
+||+|||||++|+++|..| . |++|+|+|+++.+ |+... .+... ++. + ..+...+.+ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999 6 9999999998766 32111 10110 000 0 000000000 0
Q ss_pred CCCCCCC--CCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCc
Q 010421 62 DFPWPNR--DDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNS 139 (511)
Q Consensus 62 ~~~~~~~--~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (511)
+..+... .......+.++.+.|.+.+++.++ .++++++|++++. . .
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-----------------~----------~--- 128 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGI--AIRFESPLLEHGE-----------------L----------P--- 128 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGGG-----------------C----------C---
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCC--EEEeCCEeccchh-----------------c----------c---
Confidence 0001000 001124678899999999988887 7899988876542 1 0
Q ss_pred eeEEEeCEEEEeecccC
Q 010421 140 IQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 140 ~~~~~~d~vVlAtG~~~ 156 (511)
++.+|.||.|+|.+|
T Consensus 129 --~~~ad~vV~AdG~~S 143 (381)
T 3c4a_A 129 --LADYDLVVLANGVNH 143 (381)
T ss_dssp --GGGCSEEEECCGGGG
T ss_pred --cccCCEEEECCCCCc
Confidence 356999999999885
No 175
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=2.3e-06 Score=87.37 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=77.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+|+|+.+.+. +. ...++.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 215 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL--------------------------------SG--FEKQMAA 215 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 47899999999999999999 899999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++.. ++...+++.+. +...++.+|.||+|+|. .|+.
T Consensus 216 ~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~~--g~~~~~~~D~vv~a~G~---~p~~ 272 (455)
T 1ebd_A 216 IIKKRLKKKGV--EVVTNALAKGAEER----------------EDGVTVTYEAN--GETKTIDADYVLVTVGR---RPNT 272 (455)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEEEE----------------TTEEEEEEEET--TEEEEEEESEEEECSCE---EESC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEe----------------CCeEEEEEEeC--CceeEEEcCEEEECcCC---Cccc
Confidence 88888888898 89999999999863 33355665522 12237899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
+
T Consensus 273 ~ 273 (455)
T 1ebd_A 273 D 273 (455)
T ss_dssp S
T ss_pred C
Confidence 3
No 176
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.32 E-value=3.3e-06 Score=87.16 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=80.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 243 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL--------------------------------GG--MDGEVAK 243 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------SS--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 889999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++.. ++...+.+.+..+++..++.+|.||+|+|. .|+.
T Consensus 244 ~l~~~l~~~gV--~v~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~---~p~~ 302 (491)
T 3urh_A 244 QLQRMLTKQGI--DFKLGAKVTGAVKS----------------GDGAKVTFEPVKGGEATTLDAEVVLIATGR---KPST 302 (491)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEEE----------------TTEEEEEEEETTSCCCEEEEESEEEECCCC---EECC
T ss_pred HHHHHHHhCCC--EEEECCeEEEEEEe----------------CCEEEEEEEecCCCceEEEEcCEEEEeeCC---ccCC
Confidence 88888888898 89999999999873 345567777643333347899999999994 5555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 303 ~ 303 (491)
T 3urh_A 303 D 303 (491)
T ss_dssp T
T ss_pred C
Confidence 4
No 177
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.32 E-value=1.4e-06 Score=91.33 Aligned_cols=60 Identities=20% Similarity=0.258 Sum_probs=45.5
Q ss_pred CChHHHHHHHHHHHHhc-CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEe
Q 010421 74 PSYTEILDYLESYAKHF-DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVC 151 (511)
Q Consensus 74 ~~~~~~~~yl~~~~~~~-~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlA 151 (511)
....++.++|.+.+++. ++ .++++ +|+++.... ++ .+.|.+.++. ++.+|.||+|
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~~~---------------~g~~~~v~~~~G~-----~i~ad~vI~A 247 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQRDA---------------NGNIESVRTATGR-----VFDADLFVDC 247 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEECT---------------TSCEEEEEETTSC-----EEECSEEEEC
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEEcC---------------CCCEEEEEECCCC-----EEECCEEEEC
Confidence 46778899999999888 88 88999 999998721 22 2345544432 7899999999
Q ss_pred ecccC
Q 010421 152 TGKYG 156 (511)
Q Consensus 152 tG~~~ 156 (511)
+|..|
T Consensus 248 ~G~~S 252 (550)
T 2e4g_A 248 SGFRG 252 (550)
T ss_dssp CGGGC
T ss_pred CCCch
Confidence 99874
No 178
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.29 E-value=4.3e-06 Score=85.87 Aligned_cols=102 Identities=21% Similarity=0.302 Sum_probs=76.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+.. .. -.+++.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 224 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-------------------------------VG--IDMEISK 224 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-------------------------------SS--CCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-------------------------------cc--cCHHHHH
Confidence 46899999999999999999 8999999999765410 01 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|++++... ++...+++.+...+...++.+|.||+|+|..
T Consensus 225 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 225 NFQRILQKQGF--KFKLNTKVTGATKKS---------------DGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEEECT---------------TSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEeCceEEEEEEcC---------------CceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 88888888999 899999999998721 2225666543211122378999999999953
No 179
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.27 E-value=5.4e-06 Score=88.15 Aligned_cols=62 Identities=13% Similarity=0.150 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecc
Q 010421 76 YTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGK 154 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~ 154 (511)
+..+...|.+.+.+.++ .+.++++|+++... +++ .-|.+.+..+++...+.+|.||+|||.
T Consensus 157 G~~l~~~L~~~a~~~gv--~i~~~~~v~~L~~~----------------~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGV--SIQDRKEAIALIHQ----------------DGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHHHTC--EEECSEEEEEEEEE----------------TTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCC--EEEECcEEEEEEec----------------CCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 56777888888888888 89999999999862 222 224444433455556899999999997
Q ss_pred c
Q 010421 155 Y 155 (511)
Q Consensus 155 ~ 155 (511)
+
T Consensus 219 ~ 219 (660)
T 2bs2_A 219 Y 219 (660)
T ss_dssp C
T ss_pred c
Confidence 6
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.27 E-value=2.4e-06 Score=87.06 Aligned_cols=102 Identities=20% Similarity=0.238 Sum_probs=76.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
..++|+|||+|++|+.+|..| .|.+|+++|+.+.+.. .. ...++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~ 194 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-------------------------------VY--LDKEFT 194 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT--CCHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-------------------------------cc--CCHHHH
Confidence 457999999999999999999 8999999999765411 00 135677
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
+++.+.+++.++ .++++++|++++.. +..+.+.+ ++. ++.+|.||+|+|. .|+
T Consensus 195 ~~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~v~~v~~-~~~-----~i~~d~vi~a~G~---~p~ 247 (447)
T 1nhp_A 195 DVLTEEMEANNI--TIATGETVERYEGD----------------GRVQKVVT-DKN-----AYDADLVVVAVGV---RPN 247 (447)
T ss_dssp HHHHHHHHTTTE--EEEESCCEEEEECS----------------SBCCEEEE-SSC-----EEECSEEEECSCE---EES
T ss_pred HHHHHHHHhCCC--EEEcCCEEEEEEcc----------------CcEEEEEE-CCC-----EEECCEEEECcCC---CCC
Confidence 888888888888 89999999999862 22234444 322 7899999999995 455
Q ss_pred CCCC
Q 010421 161 IPAF 164 (511)
Q Consensus 161 ~p~~ 164 (511)
.+.+
T Consensus 248 ~~~~ 251 (447)
T 1nhp_A 248 TAWL 251 (447)
T ss_dssp CGGG
T ss_pred hHHH
Confidence 5433
No 181
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.27 E-value=2.2e-06 Score=87.43 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCCCc
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASDSI 37 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~~~ 37 (511)
+.+||+|||||++|+++|..| .| .+|+|+|++..+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 357999999999999999999 78 899999994443
No 182
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.27 E-value=3.1e-06 Score=86.85 Aligned_cols=104 Identities=20% Similarity=0.244 Sum_probs=78.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ..+++.+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--------------------------------~~--~~~~~~~ 222 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV--------------------------------PT--MDAEIRK 222 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc--------------------------------cc--ccHHHHH
Confidence 47899999999999999999 899999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|.+++.. ++...|.+.+..+++..++.+|.||+|+|. .|+.
T Consensus 223 ~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~---~p~~ 281 (470)
T 1dxl_A 223 QFQRSLEKQGM--KFKLKTKVVGVDTS----------------GDGVKLTVEPSAGGEQTIIEADVVLVSAGR---TPFT 281 (470)
T ss_dssp HHHHHHHHSSC--CEECSEEEEEEECS----------------SSSEEEEEEESSSCCCEEEEESEEECCCCE---EECC
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEEc----------------CCeEEEEEEecCCCcceEEECCEEEECCCC---CcCC
Confidence 88888888898 89999999999862 334566665321222237899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 282 ~ 282 (470)
T 1dxl_A 282 S 282 (470)
T ss_dssp T
T ss_pred C
Confidence 3
No 183
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.26 E-value=4.5e-06 Score=84.18 Aligned_cols=99 Identities=18% Similarity=0.189 Sum_probs=77.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+.. . ....++.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------~--~~~~~~~~ 198 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-------------------------------R--VAGEALSE 198 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T--TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-------------------------------h--hcCHHHHH
Confidence 57899999999999999999 8899999999765410 0 12367788
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
++.+..++.++ .++++++|++++.. +++ ..|.+.++. ++.+|.||+|+|. .|+
T Consensus 199 ~l~~~l~~~GV--~i~~~~~v~~i~~~----------------~~~v~~v~l~dG~-----~i~aD~Vv~a~G~---~p~ 252 (415)
T 3lxd_A 199 FYQAEHRAHGV--DLRTGAAMDCIEGD----------------GTKVTGVRMQDGS-----VIPADIVIVGIGI---VPC 252 (415)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEES----------------SSBEEEEEESSSC-----EEECSEEEECSCC---EES
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEec----------------CCcEEEEEeCCCC-----EEEcCEEEECCCC---ccC
Confidence 88888899999 89999999999872 222 246665554 7999999999994 455
Q ss_pred C
Q 010421 161 I 161 (511)
Q Consensus 161 ~ 161 (511)
.
T Consensus 253 ~ 253 (415)
T 3lxd_A 253 V 253 (415)
T ss_dssp C
T ss_pred h
Confidence 4
No 184
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.25 E-value=2.5e-06 Score=92.24 Aligned_cols=36 Identities=50% Similarity=0.688 Sum_probs=34.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGG 39 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG 39 (511)
.+||+|||||++|+++|..| .|++|+|+|+++.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999 8999999999998888
No 185
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.25 E-value=2.1e-06 Score=87.09 Aligned_cols=106 Identities=16% Similarity=0.030 Sum_probs=71.8
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHHhh
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLCLL 277 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 277 (511)
|+|+|||+|..|+.+|..|.+.+.. .+||++.+++.+...... .....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~---~~VtlI~~~~~~~~~p~l--------------~~v~~--------------- 50 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD---LKITLISDRPYFGFTPAF--------------PHLAM--------------- 50 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT---CEEEEECSSSEEECGGGH--------------HHHHH---------------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC---CeEEEEcCCCCCccCccH--------------HHHhc---------------
Confidence 7899999999999999999987643 469999998754321100 00000
Q ss_pred hhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCceeEEeCC--cEEEcCC
Q 010421 278 LSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRASKWWFWKG--GLEFEDN 355 (511)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~--~v~~~dG 355 (511)
.. +.++ .+...+.+.+++.+|+++.+.+.+++.+ .|+++||
T Consensus 51 -----------------g~-------~~~~-------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g 93 (430)
T 3hyw_A 51 -----------------GW-------RKFE-------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSG 93 (430)
T ss_dssp -----------------TC-------SCGG-------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTC
T ss_pred -----------------CC-------CCHH-------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCC
Confidence 00 0000 0001122345566899999999999754 4899999
Q ss_pred ceeeccEEEEecCCCCc
Q 010421 356 TKLEADVVILCTGYDGK 372 (511)
Q Consensus 356 ~~~~~D~VI~aTG~~~~ 372 (511)
+++++|.+|+|||-++.
T Consensus 94 ~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 94 KKIEYDYLVIATGPKLV 110 (430)
T ss_dssp CEEECSEEEECCCCEEE
T ss_pred CEEECCEEEEeCCCCcc
Confidence 99999999999998754
No 186
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.25 E-value=2.1e-06 Score=89.17 Aligned_cols=60 Identities=25% Similarity=0.280 Sum_probs=45.6
Q ss_pred CChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEee
Q 010421 74 PSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVCT 152 (511)
Q Consensus 74 ~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlAt 152 (511)
..+..+.+.|.+.+.+.++ .++++ +|+++.... ++ .+.|++.++. ++.+|.||.|+
T Consensus 170 ~~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~---------------~~~~~~v~~~~g~-----~~~ad~vV~A~ 226 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGV--RHVVD-DVQHVGQDE---------------RGWISGVHTKQHG-----EISGDLFVDCT 226 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT---------------TSCEEEEEESSSC-----EEECSEEEECC
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEEcC---------------CCCEEEEEECCCC-----EEEcCEEEECC
Confidence 4678888999999988888 88898 999998721 22 2445554432 78999999999
Q ss_pred cccC
Q 010421 153 GKYG 156 (511)
Q Consensus 153 G~~~ 156 (511)
|..|
T Consensus 227 G~~S 230 (511)
T 2weu_A 227 GFRG 230 (511)
T ss_dssp GGGC
T ss_pred Ccch
Confidence 9875
No 187
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.23 E-value=3.8e-06 Score=86.63 Aligned_cols=100 Identities=14% Similarity=0.155 Sum_probs=77.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--c---CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R---HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
.++++|||+|+.|+.+|..| . |.+|+++|+.+.+. +. -..+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~ 232 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL--------------------------------RG--FDSE 232 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS--------------------------------TT--SCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc--------------------------------cc--cCHH
Confidence 46899999999999999999 6 99999999976541 11 1346
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+.+.+.+.+++.++ .++++++|++++... ++...|.+.++. ++.+|.||+|+|. .
T Consensus 233 ~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------~~~~~v~~~~G~-----~i~~D~vv~a~G~---~ 287 (490)
T 1fec_A 233 LRKQLTEQLRANGI--NVRTHENPAKVTKNA---------------DGTRHVVFESGA-----EADYDVVMLAIGR---V 287 (490)
T ss_dssp HHHHHHHHHHHTTE--EEEETCCEEEEEECT---------------TSCEEEEETTSC-----EEEESEEEECSCE---E
T ss_pred HHHHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------CCEEEEEECCCc-----EEEcCEEEEccCC---C
Confidence 77888888888898 899999999998721 334667665543 7899999999995 4
Q ss_pred CCCC
Q 010421 159 PIIP 162 (511)
Q Consensus 159 p~~p 162 (511)
|+..
T Consensus 288 p~~~ 291 (490)
T 1fec_A 288 PRSQ 291 (490)
T ss_dssp ESCT
T ss_pred cCcc
Confidence 5543
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.22 E-value=3.4e-06 Score=84.92 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=75.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+... . ...++.+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-------------------------------~--~~~~~~~ 189 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR-------------------------------V--LGRRIGA 189 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH-------------------------------H--HCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh-------------------------------h--cCHHHHH
Confidence 57899999999999999999 88999999997543110 0 1246778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|.+++.. +....|.+.++. ++.+|.||+|+|..
T Consensus 190 ~l~~~l~~~GV--~i~~~~~v~~i~~~----------------~~~~~v~~~dg~-----~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 190 WLRGLLTELGV--QVELGTGVVGFSGE----------------GQLEQVMASDGR-----SFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEECS----------------SSCCEEEETTSC-----EEECSEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEecc----------------CcEEEEEECCCC-----EEEcCEEEEeeCCe
Confidence 88888888898 89999999999862 233457776654 79999999999954
No 189
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.21 E-value=4.5e-06 Score=86.17 Aligned_cols=100 Identities=10% Similarity=0.128 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--c---CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R---HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTE 78 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~---g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (511)
.++++|||+|+.|+.+|..| . |.+|+++++.+.+. +. -..+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~ 236 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--------------------------------RG--FDET 236 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--------------------------------TT--SCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--------------------------------cc--cCHH
Confidence 46899999999999999999 6 99999999976541 11 1346
Q ss_pred HHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCC
Q 010421 79 ILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 79 ~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
+.+.+.+.+++.++ .++++++|++++... ++...|++.++. ++.+|.||+|+|. .
T Consensus 237 ~~~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------~~~~~v~~~~G~-----~i~~D~vv~a~G~---~ 291 (495)
T 2wpf_A 237 IREEVTKQLTANGI--EIMTNENPAKVSLNT---------------DGSKHVTFESGK-----TLDVDVVMMAIGR---I 291 (495)
T ss_dssp HHHHHHHHHHHTTC--EEEESCCEEEEEECT---------------TSCEEEEETTSC-----EEEESEEEECSCE---E
T ss_pred HHHHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------CceEEEEECCCc-----EEEcCEEEECCCC---c
Confidence 77888888888899 899999999998721 334567665543 7899999999995 4
Q ss_pred CCCC
Q 010421 159 PIIP 162 (511)
Q Consensus 159 p~~p 162 (511)
|+..
T Consensus 292 p~~~ 295 (495)
T 2wpf_A 292 PRTN 295 (495)
T ss_dssp ECCG
T ss_pred cccc
Confidence 5543
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.21 E-value=5.9e-06 Score=83.73 Aligned_cols=98 Identities=12% Similarity=0.211 Sum_probs=74.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. .. ....++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~-~~~~~~~~ 195 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL--------------------------------ER-VTAPPVSA 195 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT--------------------------------TT-TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc--------------------------------cc-hhhHHHHH
Confidence 57899999999999999999 899999999975431 00 01356777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|++++... + ++. ..|.+.++. ++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~GV--~i~~~~~v~~i~~~~-~-------------~~~v~~v~~~~G~-----~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 196 FYEHLHREAGV--DIRTGTQVCGFEMST-D-------------QQKVTAVLCEDGT-----RLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEECT-T-------------TCCEEEEEETTSC-----EEECSEEEECCCEE
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEecc-C-------------CCcEEEEEeCCCC-----EEEcCEEEECCCCC
Confidence 88888888898 899999999998610 0 233 346655543 78999999999953
No 191
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.21 E-value=8.1e-06 Score=84.17 Aligned_cols=102 Identities=21% Similarity=0.218 Sum_probs=75.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 219 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA--------------------------------NL--QDEEMKR 219 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--------------------------------TC--CCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------cc--CCHHHHH
Confidence 47899999999999999999 899999999986541 11 1246677
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++. + .++++++|++++.. ++...+.+.+. +++..++.+|.||+|+|. .|+.
T Consensus 220 ~l~~~l~~~-V--~i~~~~~v~~i~~~----------------~~~v~v~~~~~-~G~~~~i~~D~Vi~a~G~---~p~~ 276 (492)
T 3ic9_A 220 YAEKTFNEE-F--YFDAKARVISTIEK----------------EDAVEVIYFDK-SGQKTTESFQYVLAATGR---KANV 276 (492)
T ss_dssp HHHHHHHTT-S--EEETTCEEEEEEEC----------------SSSEEEEEECT-TCCEEEEEESEEEECSCC---EESC
T ss_pred HHHHHHhhC-c--EEEECCEEEEEEEc----------------CCEEEEEEEeC-CCceEEEECCEEEEeeCC---ccCC
Confidence 777776665 6 78999999999873 33455666531 233347899999999994 5665
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 277 ~ 277 (492)
T 3ic9_A 277 D 277 (492)
T ss_dssp S
T ss_pred C
Confidence 4
No 192
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.20 E-value=6.8e-06 Score=84.13 Aligned_cols=102 Identities=20% Similarity=0.158 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ...++.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 216 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL--------------------------------PN--EDADVSK 216 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 47899999999999999999 899999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++.. ++...+.+.+ +++..++.+|.||+|+|. .|+.
T Consensus 217 ~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~--~g~~~~~~~D~vv~a~G~---~p~~ 273 (464)
T 2a8x_A 217 EIEKQFKKLGV--TILTATKVESIADG----------------GSQVTVTVTK--DGVAQELKAEKVLQAIGF---APNV 273 (464)
T ss_dssp HHHHHHHHHTC--EEECSCEEEEEEEC----------------SSCEEEEEES--SSCEEEEEESEEEECSCE---EECC
T ss_pred HHHHHHHHcCC--EEEeCcEEEEEEEc----------------CCeEEEEEEc--CCceEEEEcCEEEECCCC---CccC
Confidence 88888888898 89999999999872 2334565542 122237899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 274 ~ 274 (464)
T 2a8x_A 274 E 274 (464)
T ss_dssp S
T ss_pred C
Confidence 3
No 193
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.20 E-value=1.2e-05 Score=82.88 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=80.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++++|||+|+.|+.+|..| .|.+|+++++. .+. +.+ ..++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l--------------------------------~~~--d~~~~~ 231 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-IVL--------------------------------RGF--DQQMAE 231 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-CSS--------------------------------TTS--CHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC-CCC--------------------------------ccc--CHHHHH
Confidence 46899999999999999999 89999999984 220 111 356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|.+++... ++...|++.++.+++..++.+|.||+|+|. .|+.
T Consensus 232 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~---~p~~ 291 (483)
T 3dgh_A 232 LVAASMEERGI--PFLRKTVPLSVEKQD---------------DGKLLVKYKNVETGEESEDVYDTVLWAIGR---KGLV 291 (483)
T ss_dssp HHHHHHHHTTC--CEEETEEEEEEEECT---------------TSCEEEEEEETTTCCEEEEEESEEEECSCE---EECC
T ss_pred HHHHHHHhCCC--EEEeCCEEEEEEEcC---------------CCcEEEEEecCCCCceeEEEcCEEEECccc---ccCc
Confidence 88888888898 899999999998731 445667777765455557899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 292 ~ 292 (483)
T 3dgh_A 292 D 292 (483)
T ss_dssp G
T ss_pred C
Confidence 3
No 194
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.20 E-value=8.2e-06 Score=83.22 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=75.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++++|||+|+.|+.+|..| .|.+|+++++.+.+.. .. -..++.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~d~~~~~ 193 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------KY--FDKEMVA 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------TT--CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------cc--CCHHHHH
Confidence 46899999999999999999 8999999999765410 00 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+.+++.++ .++++++|++++.. ++...|.+.++ ++.+|.||+|+| ..|+.
T Consensus 194 ~l~~~l~~~GV--~i~~~~~v~~i~~~----------------~~~v~v~~~~g------~i~aD~Vv~A~G---~~p~~ 246 (452)
T 3oc4_A 194 EVQKSLEKQAV--IFHFEETVLGIEET----------------ANGIVLETSEQ------EISCDSGIFALN---LHPQL 246 (452)
T ss_dssp HHHHHHHTTTE--EEEETCCEEEEEEC----------------SSCEEEEESSC------EEEESEEEECSC---CBCCC
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEcc----------------CCeEEEEECCC------EEEeCEEEECcC---CCCCh
Confidence 88888888888 89999999999862 33444554221 789999999999 45665
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 247 ~ 247 (452)
T 3oc4_A 247 A 247 (452)
T ss_dssp S
T ss_pred H
Confidence 4
No 195
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.19 E-value=3.3e-06 Score=86.91 Aligned_cols=101 Identities=19% Similarity=0.197 Sum_probs=76.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||||+.|+.+|..| .|.+|+|+|+.+.+. +. ..+++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 230 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM--------------------------------QG--ADRDLVK 230 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEe-CCCCceeEEEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQT-HNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
++.+..++.++ .++++++|.+++.. ++...|.+.+ ...++ ++.+|.||+|+|. .|+
T Consensus 231 ~l~~~l~~~gV--~i~~~~~v~~i~~~----------------~~~~~v~~~~~~~~g~--~~~~D~vv~a~G~---~p~ 287 (482)
T 1ojt_A 231 VWQKQNEYRFD--NIMVNTKTVAVEPK----------------EDGVYVTFEGANAPKE--PQRYDAVLVAAGR---APN 287 (482)
T ss_dssp HHHHHHGGGEE--EEECSCEEEEEEEE----------------TTEEEEEEESSSCCSS--CEEESCEEECCCE---EEC
T ss_pred HHHHHHHhcCC--EEEECCEEEEEEEc----------------CCeEEEEEeccCCCce--EEEcCEEEECcCC---CcC
Confidence 88888888888 89999999999873 2335566665 11122 6789999999995 455
Q ss_pred C
Q 010421 161 I 161 (511)
Q Consensus 161 ~ 161 (511)
.
T Consensus 288 ~ 288 (482)
T 1ojt_A 288 G 288 (482)
T ss_dssp G
T ss_pred C
Confidence 4
No 196
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.19 E-value=1.5e-05 Score=77.62 Aligned_cols=98 Identities=11% Similarity=0.051 Sum_probs=72.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+ ....+..+
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~------------------------------------~~~~~~~~ 195 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF------------------------------------RAHEASVK 195 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC------------------------------------CSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc------------------------------------CccHHHHH
Confidence 46899999999999999999 78899999996433 11134556
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+..++.++ .++++++|.+++.. ++...|.+.+..+++..++.+|.||+|+|..
T Consensus 196 ~l~~~l~~~gv--~v~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 196 ELMKAHEEGRL--EVLTPYELRRVEGD----------------ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHTTSS--EEETTEEEEEEEES----------------SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHhccccCCe--EEecCCcceeEccC----------------CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 67777777788 89999999999872 2223466664323333478999999999954
No 197
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.19 E-value=7e-06 Score=84.26 Aligned_cols=96 Identities=21% Similarity=0.226 Sum_probs=76.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--c-CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--R-HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~-g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
.++|+|||+|+.|+.+|..| . +.+|+++++.+.+.. .. ...++.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~ 205 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP-------------------------------GF--TSKSLS 205 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST-------------------------------TT--SCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc-------------------------------cc--cCHHHH
Confidence 47899999999999999999 6 999999999754310 01 135677
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+.+.+.+++.++ .++++++|++++.. ++..+|.+.+++ ++.+|.||+|+|..
T Consensus 206 ~~l~~~l~~~GV--~i~~~~~v~~i~~~----------------~~~v~v~~~~g~-----~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 206 QMLRHDLEKNDV--VVHTGEKVVRLEGE----------------NGKVARVITDKR-----TLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHTTC--EEECSCCEEEEEES----------------SSBEEEEEESSC-----EEECSEEEECSCEE
T ss_pred HHHHHHHHhcCC--EEEeCCEEEEEEcc----------------CCeEEEEEeCCC-----EEEcCEEEECCCCC
Confidence 888888888898 89999999999872 445567776654 79999999999953
No 198
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.19 E-value=8.5e-06 Score=78.79 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|++|+.+|..| .+.+|+++++.+.+ .....+.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~------------------------------------~~~~~~~~ 188 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF------------------------------------RAEKILIK 188 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC------------------------------------CCCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc------------------------------------ccCHHHHH
Confidence 46899999999999999999 78899999986432 11245566
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCC-CceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNS-NSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.+++.++ .++++++|++++... +....|.+.+..+ ++..++.+|.||+|+|..
T Consensus 189 ~l~~~l~~~gv--~i~~~~~v~~i~~~~---------------~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 189 RLMDKVENGNI--ILHTNRTLEEVTGDQ---------------MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHTSSE--EEECSCEEEEEEECS---------------SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHhcccCCe--EEEcCceeEEEEcCC---------------CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 66666777788 889999999998721 2223466665322 333478999999999954
No 199
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.19 E-value=6.6e-06 Score=84.35 Aligned_cols=99 Identities=19% Similarity=0.165 Sum_probs=75.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ..+++.+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 219 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA--------------------------------PT--LDEDVTN 219 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 889999999976541 11 1356778
Q ss_pred HHHHHH-HhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYA-KHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~-~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+.. ++.++ .++++++|++++.. ++...+.+.+. +++..++.+|.||+|+|..
T Consensus 220 ~l~~~l~~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~~-~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 220 ALVGALAKNEKM--KFMTSTKVVGGTNN----------------GDSVSLEVEGK-NGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHTCC--EEECSCEEEEEEEC----------------SSSEEEEEECC----EEEEEESEEEECSCEE
T ss_pred HHHHHHhhcCCc--EEEeCCEEEEEEEc----------------CCeEEEEEEcC-CCceEEEECCEEEECCCcc
Confidence 888888 88898 89999999999872 33456666521 1222378999999999953
No 200
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.19 E-value=6.5e-06 Score=82.79 Aligned_cols=92 Identities=21% Similarity=0.296 Sum_probs=73.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+.. .. ...++.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 191 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-------------------------------RA--APATLAD 191 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------cc--cCHHHHH
Confidence 57899999999999999999 8999999999765410 01 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|++++ . + .|++.++. ++.+|.||+|+|..
T Consensus 192 ~l~~~l~~~GV--~i~~~~~v~~i~-~----------------~---~v~~~~g~-----~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 192 FVARYHAAQGV--DLRFERSVTGSV-D----------------G---VVLLDDGT-----RIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHTTC--EEEESCCEEEEE-T----------------T---EEEETTSC-----EEECSEEEECSCEE
T ss_pred HHHHHHHHcCc--EEEeCCEEEEEE-C----------------C---EEEECCCC-----EEEcCEEEECcCCC
Confidence 88888888899 899999999987 2 2 46665543 78999999999953
No 201
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.18 E-value=3.1e-06 Score=84.88 Aligned_cols=109 Identities=15% Similarity=0.056 Sum_probs=71.9
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCceeecCcccCCccchhhhhhhhhhhhcCCCchhHHHHHHH
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTHWTVPHYRIWGLPFFMFYSTRFSQFLHGSPNQSLLRTLLC 275 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~~~~p~~~~~g~p~~~~~~~r~~~~~~~~~~~~~~~~~~~ 275 (511)
.||||+|||+|..|+-+|..|.+.+.. .+|+++.+++........ .. ....
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~---~~Vtlie~~~~~~~~p~~-------~~-------v~~g------------ 51 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPS---IEVTLIEPNETYYTCYMS-------NE-------VIGG------------ 51 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTT---SEEEEECSCSSEECSTTH-------HH-------HHHT------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcC---CeEEEEeCCCCCCCccCH-------HH-------HhcC------------
Confidence 489999999999999999999887643 469999887754322110 00 0000
Q ss_pred hhhhhhHHHHHHHHHHHHhccCCcccCCCCCCCccccccccccccccCCchhhhhccCeEEEEeCceeEEeCC--cEEEc
Q 010421 276 LLLSPLRRGVSKFIESYLLWKLPLLKYGLKPDHPFEEDYASCQMAIMPEGFFSEAEKGKIVFKRASKWWFWKG--GLEFE 353 (511)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~v~~~~i~~~~~~--~v~~~ 353 (511)
... ++ .. ..+ ++.+.+.+|+++.+.+..++.+ .|++.
T Consensus 52 --------------------~~~-------~~--------~~---~~~---~~~~~~~gv~~i~~~v~~id~~~~~v~~~ 90 (401)
T 3vrd_B 52 --------------------DRE-------LA--------SL---RVG---YDGLRAHGIQVVHDSALGIDPDKKLVKTA 90 (401)
T ss_dssp --------------------SSC-------GG--------GG---EEC---SHHHHHTTCEEECSCEEEEETTTTEEEET
T ss_pred --------------------CCC-------HH--------HH---hhC---HHHHHHCCCEEEEeEEEEEEccCcEEEec
Confidence 000 00 00 000 1233345688888888888754 48889
Q ss_pred CCceeeccEEEEecCCCCccc
Q 010421 354 DNTKLEADVVILCTGYDGKKK 374 (511)
Q Consensus 354 dG~~~~~D~VI~aTG~~~~~~ 374 (511)
+|.++++|.+|+|||.+++.+
T Consensus 91 ~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 91 GGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp TSCEEECSEEEECCCEEECGG
T ss_pred ccceeecceeeeccCCccccC
Confidence 999999999999999987653
No 202
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.18 E-value=4.6e-06 Score=83.76 Aligned_cols=97 Identities=20% Similarity=0.265 Sum_probs=74.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+.. . ....++.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~-------------------------------~--~~~~~~~~ 188 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA-------------------------------R--VVTPEISS 188 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------T--TSCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh-------------------------------h--ccCHHHHH
Confidence 46899999999999999999 8899999999754310 1 12357788
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|.+++..+ +....|.+.++. ++.+|.||+|+|..
T Consensus 189 ~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------~~v~~V~~~dG~-----~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 189 YFHDRHSGAGI--RMHYGVRATEIAAEG---------------DRVTGVVLSDGN-----TLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEEET---------------TEEEEEEETTSC-----EEECSEEEECCCEE
T ss_pred HHHHHHHhCCc--EEEECCEEEEEEecC---------------CcEEEEEeCCCC-----EEEcCEEEECcCCc
Confidence 88888888999 899999999998731 122235555554 78999999999954
No 203
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.18 E-value=1.7e-05 Score=81.40 Aligned_cols=102 Identities=20% Similarity=0.266 Sum_probs=78.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 225 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL--------------------------------PA--VDEQVAK 225 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 889999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++.. ++...+.+.+++ + ..++.+|.||+|+|. .|+.
T Consensus 226 ~l~~~l~~~Gv--~v~~~~~v~~i~~~----------------~~~~~v~~~~~~-g-~~~~~~D~vi~a~G~---~p~~ 282 (476)
T 3lad_A 226 EAQKILTKQGL--KILLGARVTGTEVK----------------NKQVTVKFVDAE-G-EKSQAFDKLIVAVGR---RPVT 282 (476)
T ss_dssp HHHHHHHHTTE--EEEETCEEEEEEEC----------------SSCEEEEEESSS-E-EEEEEESEEEECSCE---EECC
T ss_pred HHHHHHHhCCC--EEEECCEEEEEEEc----------------CCEEEEEEEeCC-C-cEEEECCEEEEeeCC---cccC
Confidence 88888888888 89999999999873 344567776543 2 337899999999995 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 283 ~ 283 (476)
T 3lad_A 283 T 283 (476)
T ss_dssp T
T ss_pred C
Confidence 4
No 204
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.18 E-value=1.4e-05 Score=82.32 Aligned_cols=104 Identities=15% Similarity=0.150 Sum_probs=79.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++...+ +.+ ..++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l---------------------------------~~~--d~~~~~ 229 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPL---------------------------------RGF--DQQMSS 229 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSS---------------------------------TTS--CHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccc---------------------------------ccC--CHHHHH
Confidence 35799999999999999999 89999999985211 111 356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|.+++... ++...|++.+..+++..++.+|.||+|+|. .|+.
T Consensus 230 ~l~~~l~~~gv--~~~~~~~v~~i~~~~---------------~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~---~p~~ 289 (488)
T 3dgz_A 230 LVTEHMESHGT--QFLKGCVPSHIKKLP---------------TNQLQVTWEDHASGKEDTGTFDTVLWAIGR---VPET 289 (488)
T ss_dssp HHHHHHHHTTC--EEEETEEEEEEEECT---------------TSCEEEEEEETTTTEEEEEEESEEEECSCE---EESC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEcC---------------CCcEEEEEEeCCCCeeEEEECCEEEEcccC---Cccc
Confidence 88888888898 899999999998731 445667777754444456899999999994 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 290 ~ 290 (488)
T 3dgz_A 290 R 290 (488)
T ss_dssp G
T ss_pred C
Confidence 4
No 205
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.18 E-value=6.3e-06 Score=84.74 Aligned_cols=95 Identities=20% Similarity=0.291 Sum_probs=72.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHH
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEIL 80 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (511)
..++|+|||+|++|+.+|..| .|.+|+++|+.+.+.. . ...++.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------------------------------~--~~~~~~ 230 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT--------------------------------I--YDGDMA 230 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS--------------------------------S--SCHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh--------------------------------c--CCHHHH
Confidence 357899999999999999999 8999999999754421 0 135677
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+++.+.+++.++ .++++++|++++.. ++.+.+.+ ++ . ++.+|.||+|+|..
T Consensus 231 ~~l~~~l~~~Gv--~i~~~~~v~~i~~~----------------~~v~~v~~-~~---~--~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 231 EYIYKEADKHHI--EILTNENVKAFKGN----------------ERVEAVET-DK---G--TYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHTTC--EEECSCCEEEEEES----------------SBEEEEEE-TT---E--EEECSEEEECSCEE
T ss_pred HHHHHHHHHcCc--EEEcCCEEEEEEcC----------------CcEEEEEE-CC---C--EEEcCEEEECcCCC
Confidence 888888888998 89999999999862 22223333 22 1 78999999999954
No 206
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=3.8e-06 Score=85.87 Aligned_cols=99 Identities=16% Similarity=0.190 Sum_probs=74.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||||++|+.+|..| .|.+|+|+|+.+.+. +. ..+++.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 216 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL--------------------------------PT--YDSELTA 216 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976542 10 1346777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++. ++ +.+.. .+++..++.+|.||+|+|. .|+.
T Consensus 217 ~l~~~l~~~gv--~i~~~~~v~~i~~-----------------~~---v~v~~-~~G~~~~i~~D~vv~a~G~---~p~~ 270 (458)
T 1lvl_A 217 PVAESLKKLGI--ALHLGHSVEGYEN-----------------GC---LLAND-GKGGQLRLEADRVLVAVGR---RPRT 270 (458)
T ss_dssp HHHHHHHHHTC--EEETTCEEEEEET-----------------TE---EEEEC-SSSCCCEECCSCEEECCCE---EECC
T ss_pred HHHHHHHHCCC--EEEECCEEEEEEe-----------------CC---EEEEE-CCCceEEEECCEEEECcCC---CcCC
Confidence 88888888898 8999999999874 11 33332 1232237899999999995 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
+
T Consensus 271 ~ 271 (458)
T 1lvl_A 271 K 271 (458)
T ss_dssp S
T ss_pred C
Confidence 4
No 207
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.16 E-value=1.8e-06 Score=87.23 Aligned_cols=47 Identities=43% Similarity=0.615 Sum_probs=40.4
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCCCcCccccCCCcCc
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASDSIGGIWKSCSYNS 48 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~~~GG~w~~~~~~~ 48 (511)
++.+||+|||||++||+||..| .| .+|+|+|+++.+||.+.....++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G 53 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHG 53 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCC
Confidence 3568999999999999999999 88 89999999999999877633333
No 208
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.16 E-value=7.1e-06 Score=84.82 Aligned_cols=99 Identities=18% Similarity=0.136 Sum_probs=76.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++++|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ...++.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 227 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL--------------------------------PY--EDADAAL 227 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS--------------------------------CC--SSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976541 11 1346778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+.+++.++ .++++++|++++.. ++...|...++. ++.+|.||+|+|. .|+.
T Consensus 228 ~l~~~l~~~GV--~i~~~~~V~~i~~~----------------~~~v~v~~~~g~-----~i~aD~Vv~a~G~---~p~~ 281 (499)
T 1xdi_A 228 VLEESFAERGV--RLFKNARAASVTRT----------------GAGVLVTMTDGR-----TVEGSHALMTIGS---VPNT 281 (499)
T ss_dssp HHHHHHHHTTC--EEETTCCEEEEEEC----------------SSSEEEEETTSC-----EEEESEEEECCCE---EECC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEe----------------CCEEEEEECCCc-----EEEcCEEEECCCC---CcCC
Confidence 88888888998 89999999999872 233445443332 7899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 282 ~ 282 (499)
T 1xdi_A 282 S 282 (499)
T ss_dssp S
T ss_pred C
Confidence 3
No 209
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.15 E-value=5.6e-06 Score=84.84 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=73.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. + ...++.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~---~~~~~~~ 220 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--------------------------------R---EDPAIGE 220 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------T---SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--------------------------------C---CCHHHHH
Confidence 46899999999999999999 899999999975431 1 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+..++.++ .++++++|++++.. ++.+.|.+. + . ++.+|.||+|+|..
T Consensus 221 ~l~~~l~~~Gv--~i~~~~~v~~i~~~----------------~~~~~v~~~-~---~--~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 221 AVTAAFRAEGI--EVLEHTQASQVAHM----------------DGEFVLTTT-H---G--ELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHTTC--EEETTCCEEEEEEE----------------TTEEEEEET-T---E--EEEESEEEECSCEE
T ss_pred HHHHHHHhCCC--EEEcCCEEEEEEEe----------------CCEEEEEEC-C---c--EEEcCEEEECCCCC
Confidence 88888888898 89999999999872 334555543 1 1 78999999999953
No 210
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.15 E-value=5.9e-06 Score=84.55 Aligned_cols=100 Identities=17% Similarity=0.140 Sum_probs=75.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. .. -..++.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 211 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL--------------------------------FQ--FDPLLSA 211 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976541 11 1246677
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++.. ++...|++.++ +. ++.+|.||+|+|. .|+.
T Consensus 212 ~l~~~l~~~gv--~i~~~~~v~~i~~~----------------~~~~~v~~~~G---~~-~i~~D~vv~a~G~---~p~~ 266 (463)
T 2r9z_A 212 TLAENMHAQGI--ETHLEFAVAALERD----------------AQGTTLVAQDG---TR-LEGFDSVIWAVGR---APNT 266 (463)
T ss_dssp HHHHHHHHTTC--EEESSCCEEEEEEE----------------TTEEEEEETTC---CE-EEEESEEEECSCE---EESC
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEe----------------CCeEEEEEeCC---cE-EEEcCEEEECCCC---CcCC
Confidence 78888888888 89999999999873 22355665443 21 5899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 267 ~ 267 (463)
T 2r9z_A 267 R 267 (463)
T ss_dssp T
T ss_pred C
Confidence 3
No 211
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.15 E-value=6.9e-06 Score=84.68 Aligned_cols=99 Identities=17% Similarity=0.310 Sum_probs=74.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+.. .. ...++.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 240 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA-------------------------------GY--YDRDLTD 240 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh-------------------------------hH--HHHHHHH
Confidence 57899999999999999999 8999999999765410 01 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|++++. + +....|.+ ++. ++.+|.||+|+|. .|+.
T Consensus 241 ~l~~~l~~~GV--~i~~~~~v~~i~~--~--------------~~v~~v~~-~g~-----~i~~D~Vi~a~G~---~p~~ 293 (490)
T 2bc0_A 241 LMAKNMEEHGI--QLAFGETVKEVAG--N--------------GKVEKIIT-DKN-----EYDVDMVILAVGF---RPNT 293 (490)
T ss_dssp HHHHHHHTTTC--EEEETCCEEEEEC--S--------------SSCCEEEE-SSC-----EEECSEEEECCCE---EECC
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEc--C--------------CcEEEEEE-CCc-----EEECCEEEECCCC---CcCh
Confidence 88888888898 8999999999985 1 11112443 332 7899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
+
T Consensus 294 ~ 294 (490)
T 2bc0_A 294 T 294 (490)
T ss_dssp G
T ss_pred H
Confidence 4
No 212
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.14 E-value=1.2e-05 Score=82.70 Aligned_cols=105 Identities=17% Similarity=0.079 Sum_probs=78.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 232 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--------------------------------RS--FDSMIST 232 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 899999999976541 11 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCce--eEEEeCEEEEeecccCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSI--QRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~--~~~~~d~vVlAtG~~~~~ 158 (511)
++.+..++.++ .++++++|++++... ++ ...|.+.+..+++. .++.+|.||+|+|. .
T Consensus 233 ~~~~~l~~~gv--~i~~~~~v~~i~~~~---------------~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~---~ 292 (478)
T 3dk9_A 233 NCTEELENAGV--EVLKFSQVKEVKKTL---------------SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR---V 292 (478)
T ss_dssp HHHHHHHHTTC--EEETTEEEEEEEECS---------------SSEEEEEEECCTTSCCEEEEEEEESEEEECSCE---E
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEEcC---------------CCcEEEEEEccCCCCcccceEEEcCEEEEeecc---c
Confidence 88888888898 899999999998731 33 34555554322222 47899999999995 4
Q ss_pred CCCC
Q 010421 159 PIIP 162 (511)
Q Consensus 159 p~~p 162 (511)
|+..
T Consensus 293 p~~~ 296 (478)
T 3dk9_A 293 PNTK 296 (478)
T ss_dssp ESCT
T ss_pred cCCC
Confidence 5554
No 213
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.14 E-value=6.1e-06 Score=84.85 Aligned_cols=100 Identities=13% Similarity=0.113 Sum_probs=75.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. +. ..+++.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~d~~~~~ 230 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL--------------------------------RK--FDECIQN 230 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc--------------------------------cc--cCHHHHH
Confidence 47899999999999999999 899999999976541 11 1356777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+.+..++.++ .++++++|++++... ++ ...|.+.+++ .++.+|.||+|+|. .|+
T Consensus 231 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------~~~~~~v~~~~G~----~~i~~D~vv~a~G~---~p~ 286 (479)
T 2hqm_A 231 TITDHYVKEGI--NVHKLSKIVKVEKNV---------------ETDKLKIHMNDSK----SIDDVDELIWTIGR---KSH 286 (479)
T ss_dssp HHHHHHHHHTC--EEECSCCEEEEEECC----------------CCCEEEEETTSC----EEEEESEEEECSCE---EEC
T ss_pred HHHHHHHhCCe--EEEeCCEEEEEEEcC---------------CCcEEEEEECCCc----EEEEcCEEEECCCC---CCc
Confidence 88888888898 899999999998721 22 2456654431 27899999999995 455
Q ss_pred C
Q 010421 161 I 161 (511)
Q Consensus 161 ~ 161 (511)
.
T Consensus 287 ~ 287 (479)
T 2hqm_A 287 L 287 (479)
T ss_dssp C
T ss_pred c
Confidence 4
No 214
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.14 E-value=3.5e-05 Score=79.94 Aligned_cols=107 Identities=15% Similarity=0.120 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++. .+. +.+ .+++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~-~~l--------------------------------~~~--d~~~~~ 254 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS-ILL--------------------------------RGF--DQDMAN 254 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS--------------------------------TTS--CHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc-ccc--------------------------------ccC--CHHHHH
Confidence 35799999999999999999 89999999984 220 111 356788
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
++.+..++.++ .++++++|.++....+. ..+...+.+...++++..++.+|.||+|+|. .|+.
T Consensus 255 ~~~~~l~~~GV--~v~~~~~v~~v~~~~~~------------~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~---~p~~ 317 (519)
T 3qfa_A 255 KIGEHMEEHGI--KFIRQFVPIKVEQIEAG------------TPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR---DACT 317 (519)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEEEEECC------------TTCEEEEEEEESSSSCEEEEEESEEEECSCE---EESC
T ss_pred HHHHHHHHCCC--EEEeCCeEEEEEEccCC------------CCceEEEEEEECCCcEEEEEECCEEEEecCC---cccC
Confidence 88888888898 89999988888763211 0244556665544334346789999999994 5655
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 318 ~ 318 (519)
T 3qfa_A 318 R 318 (519)
T ss_dssp S
T ss_pred C
Confidence 4
No 215
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.13 E-value=8e-06 Score=84.77 Aligned_cols=99 Identities=13% Similarity=0.028 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++++|||||+.|+..|..+ .|.+|+|+++...+ +. ..+++.+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L---------------------------------~~--~D~ei~~ 267 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL---------------------------------RG--FDQQCAV 267 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS---------------------------------TT--SCHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc---------------------------------cc--cchhHHH
Confidence 46899999999999999999 99999999874321 11 1357888
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.++...++.++ .++++++|.+++.. ++...|.+.++. ++.+|.|++|+| ..|++
T Consensus 268 ~l~~~l~~~gi--~~~~~~~v~~~~~~----------------~~~~~v~~~~~~-----~~~~D~vLvAvG---R~Pnt 321 (542)
T 4b1b_A 268 KVKLYMEEQGV--MFKNGILPKKLTKM----------------DDKILVEFSDKT-----SELYDTVLYAIG---RKGDI 321 (542)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEEE----------------TTEEEEEETTSC-----EEEESEEEECSC---EEESC
T ss_pred HHHHHHHhhcc--eeecceEEEEEEec----------------CCeEEEEEcCCC-----eEEEEEEEEccc---ccCCc
Confidence 88888999998 89999999999874 344455554443 678999999999 56776
Q ss_pred CC
Q 010421 162 PA 163 (511)
Q Consensus 162 p~ 163 (511)
-.
T Consensus 322 ~~ 323 (542)
T 4b1b_A 322 DG 323 (542)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 216
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.13 E-value=9.2e-06 Score=82.41 Aligned_cols=95 Identities=17% Similarity=0.299 Sum_probs=74.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..+ .|.+|+|+|+.+.+. +.+ .+++.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll--------------------------------~~~--d~~~~~ 192 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN--------------------------------KLM--DADMNQ 192 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS--------------------------------TTS--CGGGGH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc--------------------------------ccc--cchhHH
Confidence 46899999999999999999 899999999976552 111 234566
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++.. .+.+++++ ++.+|.||+|+|. .|+.
T Consensus 193 ~~~~~l~~~gV--~i~~~~~v~~~~~~--------------------~v~~~~g~-----~~~~D~vl~a~G~---~Pn~ 242 (437)
T 4eqs_A 193 PILDELDKREI--PYRLNEEINAINGN--------------------EITFKSGK-----VEHYDMIIEGVGT---HPNS 242 (437)
T ss_dssp HHHHHHHHTTC--CEEESCCEEEEETT--------------------EEEETTSC-----EEECSEEEECCCE---EESC
T ss_pred HHHHHhhccce--EEEeccEEEEecCC--------------------eeeecCCe-----EEeeeeEEEEece---ecCc
Confidence 77777888888 89999999887641 36666665 7899999999994 5654
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 243 ~ 243 (437)
T 4eqs_A 243 K 243 (437)
T ss_dssp G
T ss_pred H
Confidence 3
No 217
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.11 E-value=1e-05 Score=82.53 Aligned_cols=100 Identities=17% Similarity=0.154 Sum_probs=74.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++|+.+.+.. .. ...++.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 195 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-------------------------------KY--FDKEFTD 195 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-------------------------------TT--SCHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-------------------------------hh--hhhhHHH
Confidence 46899999999999999999 7899999999754410 01 1356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+.+..++.++ .++++++|++++.. +++......++ + ++.+|.||+|+|. .|+.
T Consensus 196 ~l~~~l~~~Gv--~i~~~~~v~~i~~~----------------~~~v~~v~~~g---~--~i~~D~vv~a~G~---~p~~ 249 (452)
T 2cdu_A 196 ILAKDYEAHGV--NLVLGSKVAAFEEV----------------DDEIITKTLDG---K--EIKSDIAILCIGF---RPNT 249 (452)
T ss_dssp HHHHHHHHTTC--EEEESSCEEEEEEE----------------TTEEEEEETTS---C--EEEESEEEECCCE---EECC
T ss_pred HHHHHHHHCCC--EEEcCCeeEEEEcC----------------CCeEEEEEeCC---C--EEECCEEEECcCC---CCCH
Confidence 88888888999 89999999999862 23222111222 2 7899999999995 4554
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 250 ~ 250 (452)
T 2cdu_A 250 E 250 (452)
T ss_dssp G
T ss_pred H
Confidence 3
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.11 E-value=1e-05 Score=85.01 Aligned_cols=111 Identities=14% Similarity=0.252 Sum_probs=75.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. + ....++.+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~--~~~~~~~~ 196 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM--------------------------------T--PVDREMAG 196 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC--------------------------------T--TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc--------------------------------h--hcCHHHHH
Confidence 46899999999999999999 889999999976431 1 11356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCc--ccCCCCC-CCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLET--TDSGGNL-LPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~--~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+..++.++ .++++++|.+++...+... -..+... ....++...+.+.++. ++.+|.||+|+|..
T Consensus 197 ~l~~~l~~~GV--~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-----~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 197 FAHQAIRDQGV--DLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGE-----LLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHTTC--EEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSC-----EEEESEEEECSCEE
T ss_pred HHHHHHHHCCC--EEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCC-----EEEcCEEEECcCCc
Confidence 88888888898 8999999999986210000 0000000 0001344555554433 78999999999953
No 219
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.11 E-value=1.3e-06 Score=90.54 Aligned_cols=46 Identities=26% Similarity=0.307 Sum_probs=32.6
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCcee
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTK 50 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~ 50 (511)
|+|+|||||++||+||..| .|++|+|+|+++.+||.......++..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~ 49 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFT 49 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEE
Confidence 6899999999999999999 999999999999999965442334433
No 220
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.10 E-value=9.7e-06 Score=83.46 Aligned_cols=95 Identities=15% Similarity=0.215 Sum_probs=75.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l--------------------------------~~--~~~~~~~ 236 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL--------------------------------RN--FDYDLRQ 236 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 889999999976541 11 1246777
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.+++.++ .++++++|++++.. ++.+.|.+.++. ++.+|.||+|+|..
T Consensus 237 ~l~~~l~~~Gv--~i~~~~~V~~i~~~----------------~~~v~v~~~~g~-----~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 237 LLNDAMVAKGI--SIIYEATVSQVQST----------------ENCYNVVLTNGQ-----TICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHTC--EEESSCCEEEEEEC----------------SSSEEEEETTSC-----EEEESEEEECCCEE
T ss_pred HHHHHHHHCCC--EEEeCCEEEEEEee----------------CCEEEEEECCCc-----EEEcCEEEEeeCCC
Confidence 78888888898 89999999999873 345667766553 78999999999953
No 221
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.09 E-value=1.5e-06 Score=90.13 Aligned_cols=40 Identities=28% Similarity=0.521 Sum_probs=36.2
Q ss_pred CCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCCCcCccccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~~~GG~w~~ 43 (511)
.+||+|||||++||+||..| .|++|+|+|+++.+||....
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T 52 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAST 52 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeee
Confidence 46999999999999999999 48999999999999996543
No 222
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.08 E-value=2.2e-06 Score=85.93 Aligned_cols=43 Identities=26% Similarity=0.426 Sum_probs=38.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--c-CCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--R-HHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~-g~~v~v~e~~~~~GG~w~~ 43 (511)
|...+||+|||||++||++|..| . |.+|+|+|+++.+||.+..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 33468999999999999999999 6 8999999999999998876
No 223
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.07 E-value=2.5e-06 Score=87.04 Aligned_cols=42 Identities=17% Similarity=0.258 Sum_probs=38.6
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+..+||+|||||++||+||..| .|.+|+|+|+++.+||.+..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 3458999999999999999999 89999999999999998765
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.05 E-value=6.5e-06 Score=81.52 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=71.8
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDY 82 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (511)
++|+|||+|+.|+.+|..| .|.+|+++|+.+.+. + -.+++.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~---~~~~~~~~ 188 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL--------------------------------G---LDEELSNM 188 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT--------------------------------T---CCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec--------------------------------c---CCHHHHHH
Confidence 6899999999999999999 899999999976541 1 13577788
Q ss_pred HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 83 LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 83 l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
+.+..++.++ .++++++|++++. + .|++.++ ++.+|.||+|+|. .|+.
T Consensus 189 l~~~l~~~gV--~i~~~~~v~~i~~-----------------~---~v~~~~g------~i~~D~vi~a~G~---~p~~ 236 (367)
T 1xhc_A 189 IKDMLEETGV--KFFLNSELLEANE-----------------E---GVLTNSG------FIEGKVKICAIGI---VPNV 236 (367)
T ss_dssp HHHHHHHTTE--EEECSCCEEEECS-----------------S---EEEETTE------EEECSCEEEECCE---EECC
T ss_pred HHHHHHHCCC--EEEcCCEEEEEEe-----------------e---EEEECCC------EEEcCEEEECcCC---CcCH
Confidence 8888888898 8899999998863 1 3555432 3899999999995 4554
No 225
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.05 E-value=4.3e-06 Score=83.17 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=38.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
..+||+|||||++|+++|..| .|.+|+|+|+++.+||.|..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 357999999999999999999 89999999999999999886
No 226
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.03 E-value=3e-06 Score=87.79 Aligned_cols=49 Identities=43% Similarity=0.588 Sum_probs=39.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCce
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNST 49 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~ 49 (511)
|++.+||+|||||++||++|..| .|++|+|+|+++.+||.+.....++.
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~ 60 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGL 60 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTE
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCe
Confidence 44458999999999999999999 89999999999999998766343333
No 227
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.03 E-value=1.6e-05 Score=81.90 Aligned_cols=96 Identities=15% Similarity=0.090 Sum_probs=72.4
Q ss_pred CCeEEEECCCHHHHHHHHhc------cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL------RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYT 77 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l------~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. ...+ ..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-------------------------------~~~l--~~ 226 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-------------------------------GKIL--PE 226 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-------------------------------TTTS--CH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-------------------------------cccC--CH
Confidence 46899999999999999998 268899999864321 0111 14
Q ss_pred HHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 78 EILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 78 ~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
++.+++.+..++.++ .++++++|++++.. ++...|.+.++. ++.+|.||+|+|..
T Consensus 227 ~~~~~~~~~l~~~GV--~v~~~~~V~~i~~~----------------~~~~~v~l~dG~-----~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 227 YLSNWTMEKVRREGV--KVMPNAIVQSVGVS----------------SGKLLIKLKDGR-----KVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHTTTC--EEECSCCEEEEEEE----------------TTEEEEEETTSC-----EEEESEEEECCCEE
T ss_pred HHHHHHHHHHHhcCC--EEEeCCEEEEEEec----------------CCeEEEEECCCC-----EEECCEEEECCCCC
Confidence 677788888888888 89999999999862 333456655543 79999999999954
No 228
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.02 E-value=1.4e-05 Score=84.88 Aligned_cols=66 Identities=11% Similarity=-0.031 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHhc--CCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce-EEEEEeCCCCceeEEEeCEEEEee
Q 010421 76 YTEILDYLESYAKHF--DVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW-EVAVQTHNSNSIQRYGFEFLVVCT 152 (511)
Q Consensus 76 ~~~~~~yl~~~~~~~--~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~d~vVlAt 152 (511)
+..+...|.+.+++. ++ .+..++.|+++...++ ..++. -|...+..+++...+.++.||+||
T Consensus 165 G~~i~~~L~~~a~~~~~gV--~i~~~~~v~dLi~~~~-------------~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLAT 229 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQD--RIIERIFIVKLLLDKN-------------TPNRIAGAVGFNLRANEVHIFKANAMVVAC 229 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTT--TEECSEEECCCEECSS-------------STTBEEEEEEEESSSSCEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCc--EEEEceEEEEEEEeCC-------------ccceEEEEEEEEcCCCcEEEEEeCEEEECC
Confidence 456667777777776 77 8899999998876310 00132 233444334555678999999999
Q ss_pred cccC
Q 010421 153 GKYG 156 (511)
Q Consensus 153 G~~~ 156 (511)
|.++
T Consensus 230 GG~g 233 (662)
T 3gyx_A 230 GGAV 233 (662)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9873
No 229
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.01 E-value=3e-06 Score=88.14 Aligned_cols=43 Identities=42% Similarity=0.647 Sum_probs=38.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
|.+.+||+|||||++||+||..| .|++|+|+|+++.+||....
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 66778999999999999999999 89999999999999997554
No 230
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.99 E-value=4.5e-05 Score=75.08 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=69.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+. ...++.+
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------~~~~~~~ 206 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ------------------------------------GHGKTAH 206 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS------------------------------------SCSHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC------------------------------------CCHHHHH
Confidence 46899999999999999999 788999999975431 0113445
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc-eEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV-WEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+....++.++ .++++++|.+++.. +++ ..|.+.. .+++..++.+|.||+|+|..
T Consensus 207 ~l~~~~~~~gv--~i~~~~~v~~i~~~----------------~~~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 207 EVERARANGTI--DVYLETEVASIEES----------------NGVLTRVHLRS-SDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp SSHHHHHHTSE--EEESSEEEEEEEEE----------------TTEEEEEEEEE-TTCCEEEEECSEEEECCCBC
T ss_pred HHHHHhhcCce--EEEcCcCHHHhccC----------------CCceEEEEEEe-cCCCeEEEeCCEEEECCCCC
Confidence 55566666677 78899999999873 222 2455552 12333478999999999953
No 231
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.98 E-value=2.1e-05 Score=81.66 Aligned_cols=99 Identities=12% Similarity=0.121 Sum_probs=75.8
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDY 82 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (511)
++++|||+|..|+.+|..| .|.+|+++++.+.+. +. ...++.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~~ 260 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK--------------------------------LI--KDNETRAY 260 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--------------------------------TC--CSHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc--------------------------------cc--ccHHHHHH
Confidence 7899999999999999999 889999999976541 11 13567788
Q ss_pred HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCc---eEEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 83 LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPV---WEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 83 l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
+.+.+++.++ .++++++|++++..+ ++. +.|.+.++ + .++.+|.||+|+|. .|
T Consensus 261 l~~~l~~~GV--~i~~~~~V~~i~~~~---------------~~~v~~~~v~~~~G---~-~~i~aD~Vv~A~G~---~p 316 (523)
T 1mo9_A 261 VLDRMKEQGM--EIISGSNVTRIEEDA---------------NGRVQAVVAMTPNG---E-MRIETDFVFLGLGE---QP 316 (523)
T ss_dssp HHHHHHHTTC--EEESSCEEEEEEECT---------------TSBEEEEEEEETTE---E-EEEECSCEEECCCC---EE
T ss_pred HHHHHHhCCc--EEEECCEEEEEEEcC---------------CCceEEEEEEECCC---c-EEEEcCEEEECcCC---cc
Confidence 8888888898 899999999998721 232 45555332 1 26899999999994 45
Q ss_pred CC
Q 010421 160 II 161 (511)
Q Consensus 160 ~~ 161 (511)
+.
T Consensus 317 ~~ 318 (523)
T 1mo9_A 317 RS 318 (523)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 232
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.97 E-value=2.3e-05 Score=80.11 Aligned_cols=99 Identities=9% Similarity=0.055 Sum_probs=75.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++++|||+|+.|+.+|..+ .|.+|+++++.+.+. +. ...++.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--------------------------------~~--~~~~~~~ 215 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--------------------------------SR--FDQDMRR 215 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--------------------------------cc--cCHHHHH
Confidence 46899999999999999999 889999999976541 11 1346778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEE-EEeCCCCceeEEEeCEEEEeecccCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVA-VQTHNSNSIQRYGFEFLVVCTGKYGDVPI 160 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~d~vVlAtG~~~~~p~ 160 (511)
.+.+.+++.++ .++++++|.+++... ++...|. +.++ ++.+|.||+|+|. .|+
T Consensus 216 ~l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~~g------~i~aD~Vv~a~G~---~p~ 269 (463)
T 4dna_A 216 GLHAAMEEKGI--RILCEDIIQSVSADA---------------DGRRVATTMKHG------EIVADQVMLALGR---MPN 269 (463)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEECT---------------TSCEEEEESSSC------EEEESEEEECSCE---EES
T ss_pred HHHHHHHHCCC--EEECCCEEEEEEEcC---------------CCEEEEEEcCCC------eEEeCEEEEeeCc---ccC
Confidence 88888888898 899999999998731 3334454 3332 3899999999995 455
Q ss_pred CC
Q 010421 161 IP 162 (511)
Q Consensus 161 ~p 162 (511)
..
T Consensus 270 ~~ 271 (463)
T 4dna_A 270 TN 271 (463)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 233
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=2.1e-05 Score=80.15 Aligned_cols=94 Identities=20% Similarity=0.289 Sum_probs=69.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+.. .. ...++.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~--~~~~~~~ 194 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-------------------------------RS--FDKEVTD 194 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-------------------------------hh--cCHHHHH
Confidence 46899999999999999999 8899999999765411 00 1246677
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+..++. + .++++++|.+++.. +.......++. ++.+|.||+|+|..
T Consensus 195 ~l~~~l~~~-v--~i~~~~~v~~i~~~-----------------~~v~~v~~~g~-----~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 195 ILEEKLKKH-V--NLRLQEITMKIEGE-----------------ERVEKVVTDAG-----EYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHTTT-S--EEEESCCEEEEECS-----------------SSCCEEEETTE-----EEECSEEEECSCEE
T ss_pred HHHHHHHhC-c--EEEeCCeEEEEecc-----------------CcEEEEEeCCC-----EEECCEEEEeeCCc
Confidence 777777666 6 88999999998752 12222233332 78999999999953
No 234
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.95 E-value=3.7e-06 Score=87.36 Aligned_cols=40 Identities=40% Similarity=0.675 Sum_probs=37.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCCCcCccccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~~~GG~w~~ 43 (511)
.+||+|||||++||+||..| .| .+|+|+|+++.+||.+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 47999999999999999999 88 999999999999997654
No 235
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.95 E-value=1.5e-05 Score=80.79 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=37.3
Q ss_pred hhhccCeEEEEeCceeEEeCC--cEEEcCCceeeccEEEEecCCCCccc
Q 010421 328 SEAEKGKIVFKRASKWWFWKG--GLEFEDNTKLEADVVILCTGYDGKKK 374 (511)
Q Consensus 328 ~~l~~g~v~v~~~~i~~~~~~--~v~~~dG~~~~~D~VI~aTG~~~~~~ 374 (511)
+.+++.+|+++.+.+..++.+ .|.+++|+++.+|.||+|||.+++.+
T Consensus 67 ~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 67 HYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp HHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGG
T ss_pred HHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcc
Confidence 445556778887778888764 48889998899999999999987643
No 236
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.94 E-value=2.1e-05 Score=83.02 Aligned_cols=93 Identities=20% Similarity=0.299 Sum_probs=73.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +. ...++.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~--~~~~~~~ 232 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM--------------------------------PP--IDYEMAA 232 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TT--SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------------------------------cc--CCHHHHH
Confidence 46899999999999999999 889999999976441 11 2356778
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+..++.++ .++++++|.+++.. .+ .|.+.++. ++.+|.||+|+|..
T Consensus 233 ~l~~~l~~~GV--~i~~~~~v~~i~~~----------------~~--~v~~~~g~-----~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 233 YVHEHMKNHDV--ELVFEDGVDALEEN----------------GA--VVRLKSGS-----VIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEGG----------------GT--EEEETTSC-----EEECSEEEECSCEE
T ss_pred HHHHHHHHcCC--EEEECCeEEEEecC----------------CC--EEEECCCC-----EEEcCEEEEccCCC
Confidence 88888888898 89999999999862 11 36665543 78999999999953
No 237
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.94 E-value=8e-06 Score=83.99 Aligned_cols=49 Identities=37% Similarity=0.469 Sum_probs=41.1
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCCCcCccccCC-CcCceec
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASDSIGGIWKSC-SYNSTKL 51 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~~~GG~w~~~-~~~~~~~ 51 (511)
+.+||+|||||++||++|..| .| .+|+|+|+++.+||.|... .+++..+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~ 60 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTW 60 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEE
Confidence 357999999999999999999 66 7999999999999998862 4445443
No 238
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.92 E-value=6.6e-06 Score=84.84 Aligned_cols=42 Identities=24% Similarity=0.352 Sum_probs=37.6
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
++.+||+|||||++||+||..| .|++|+|+|+++.+||.+..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 3467999999999999999999 89999999999999996543
No 239
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.91 E-value=5.9e-06 Score=84.27 Aligned_cols=41 Identities=41% Similarity=0.505 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+.+||+|||||++||+||..| .|++|+|+|+++.+||.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 357999999999999999999 89999999999999998764
No 240
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.91 E-value=6e-05 Score=73.19 Aligned_cols=96 Identities=16% Similarity=0.173 Sum_probs=68.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|++|+.+|..| .+.+|+++++.+.+. . .. .
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~--------------------------------~----~~---~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR--------------------------------A----ST---I 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------S----CH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC--------------------------------C----CH---H
Confidence 46899999999999999999 788999999975431 0 11 2
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+.+.+.++.++ .++++++|.+++... ++...|.+.+..+++..++.+|.||+|+|..
T Consensus 214 ~~~~l~~~~gv--~i~~~~~v~~i~~~~---------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 214 MQKRAEKNEKI--EILYNTVALEAKGDG---------------KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHHCTTE--EEECSEEEEEEEESS---------------SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHHhcCCe--EEeecceeEEEEccc---------------CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 22333344477 788899999998731 2233477777444444578999999999954
No 241
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.91 E-value=2.3e-05 Score=78.77 Aligned_cols=47 Identities=15% Similarity=0.037 Sum_probs=35.7
Q ss_pred hhhccCeEEEEeCceeEEeCC--cEEEcCCce----eeccEEEEecCCCCccc
Q 010421 328 SEAEKGKIVFKRASKWWFWKG--GLEFEDNTK----LEADVVILCTGYDGKKK 374 (511)
Q Consensus 328 ~~l~~g~v~v~~~~i~~~~~~--~v~~~dG~~----~~~D~VI~aTG~~~~~~ 374 (511)
+.+++.+++++.+.+.+++.+ .|.+++|+. +++|.||+|||.++..+
T Consensus 64 ~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 64 EALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp HHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred HHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 445555678887777788755 588888764 89999999999987643
No 242
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.90 E-value=2.8e-05 Score=76.75 Aligned_cols=101 Identities=15% Similarity=0.212 Sum_probs=67.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+.. +. + .........+.+
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~-------~~----------------~----d~~~~~~~~~~~ 218 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLND-------PD----------------A----DPSVRLSPYTRQ 218 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-------------------------------------CTTSCCHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCC-------CC----------------C----CCCccCCHHHHH
Confidence 35899999999999999999 7899999999764310 00 0 011112245566
Q ss_pred HHHHHHHhcC-CCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEE-EeCEEEEeecc
Q 010421 82 YLESYAKHFD-VFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRY-GFEFLVVCTGK 154 (511)
Q Consensus 82 yl~~~~~~~~-~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vVlAtG~ 154 (511)
++....++.+ + .++++++|.+++.. ++...|.+.++. .+ .+|.||+|||.
T Consensus 219 ~l~~~l~~~g~v--~~~~~~~v~~i~~~----------------~~~~~v~~~~g~-----~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 219 RLGNVIKQGARI--EMNVHYTVKDIDFN----------------NGQYHISFDSGQ-----SVHTPHEPILATGF 270 (369)
T ss_dssp HHHHHHHTTCCE--EEECSCCEEEEEEE----------------TTEEEEEESSSC-----CEEESSCCEECCCB
T ss_pred HHHHHHhhCCcE--EEecCcEEEEEEec----------------CCceEEEecCCe-----EeccCCceEEeecc
Confidence 7777777665 7 78889999999752 334556665553 44 46999999995
No 243
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.89 E-value=6.6e-05 Score=72.09 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=66.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|++|+.+|..| .+.+|+++++.+.+. ..+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------~~~~--- 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK------------------------------------ADQV--- 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC------------------------------------SCHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC------------------------------------ccHH---
Confidence 46899999999999999999 778999999865430 0112
Q ss_pred HHHHHHHh-cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce-EEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKH-FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW-EVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+.+..++ .++ .++++++|+++... +++. .|.+.+..+++..++.+|.||+|+|..
T Consensus 185 -~~~~l~~~~gv--~v~~~~~v~~i~~~----------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 185 -LQDKLRSLKNV--DIILNAQTTEVKGD----------------GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp -HHHHHHTCTTE--EEESSEEEEEEEES----------------SSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred -HHHHHhhCCCe--EEecCCceEEEEcC----------------CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 2222333 466 78889999999862 2222 467776444555578999999999953
No 244
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.86 E-value=9.4e-06 Score=80.84 Aligned_cols=42 Identities=38% Similarity=0.544 Sum_probs=37.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
|+ .+||+|||||++|+++|..| .|.+|+|+|+++.+||.|..
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 53 47999999999999999999 78999999999999999876
No 245
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.86 E-value=6.9e-05 Score=72.55 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=66.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+. ....
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------~~~~--- 192 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR------------------------------------ANKV--- 192 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC------------------------------------SCHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC------------------------------------cchH---
Confidence 46899999999999999999 788999999865330 0112
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+.+.+.++.++ .++++++|+++... +....|.+.+..+++..++.+|.||+|+|..
T Consensus 193 ~~~~l~~~~gv--~i~~~~~v~~i~~~----------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 193 AQARAFANPKM--KFIWDTAVEEIQGA----------------DSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHTCTTE--EEECSEEEEEEEES----------------SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHhcCCc--eEecCCceEEEccC----------------CcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 22233334466 78889999999862 2223466664333444578999999999953
No 246
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.84 E-value=8.4e-05 Score=79.09 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHhcc------CCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQLR------HHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l~------g~~v~v~e~~~~ 36 (511)
.+||+|||||++||+||..|. |.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 369999999999999999883 689999999764
No 247
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.84 E-value=8.7e-06 Score=83.59 Aligned_cols=40 Identities=35% Similarity=0.580 Sum_probs=36.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCCCcCccccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASDSIGGIWKS 43 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~~~GG~w~~ 43 (511)
.+||+|||||++||++|.+| .|. +|+|+|+++.+||....
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 37999999999999999999 788 99999999999987654
No 248
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.84 E-value=4e-05 Score=73.00 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=29.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+.+|..|++.+.+ |+++.+.+
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~-----v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN-----ILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 4799999999999999999998754 99999864
No 249
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.83 E-value=1.1e-05 Score=82.67 Aligned_cols=40 Identities=30% Similarity=0.529 Sum_probs=36.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC--CCcEEEcCCCCcCccccC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH--HNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g--~~v~v~e~~~~~GG~w~~ 43 (511)
.+||+|||||++||++|..| .| .+|+|+|+++.+||....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 57999999999999999999 77 999999999999997665
No 250
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.82 E-value=1.1e-05 Score=82.92 Aligned_cols=41 Identities=34% Similarity=0.632 Sum_probs=36.5
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
..+||+|||||++||++|..| .|++|+|+|+++.+||....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 357999999999999999999 89999999999999997655
No 251
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.82 E-value=0.00015 Score=70.11 Aligned_cols=94 Identities=14% Similarity=0.088 Sum_probs=69.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. ......
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~------------------------------------~~~~~~- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR------------------------------------AHEHSV- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS------------------------------------SCHHHH-
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC------------------------------------ccHHHH-
Confidence 46899999999999999999 778899999865430 011111
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
..+++.++ .++++++|.+++.. ++...|++.+..+++..++.+|.||+|+|..
T Consensus 197 ---~~l~~~gv--~~~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 197 ---ENLHASKV--NVLTPFVPAELIGE----------------DKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp ---HHHHHSSC--EEETTEEEEEEECS----------------SSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred ---HHHhcCCe--EEEeCceeeEEecC----------------CceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 12456777 88889999999862 2345688887655555679999999999954
No 252
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.82 E-value=9.6e-05 Score=71.73 Aligned_cols=96 Identities=18% Similarity=0.188 Sum_probs=67.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. ..+.+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~------------------------------------~~~~~-- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR------------------------------------ASKIM-- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC------------------------------------SCHHH--
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC------------------------------------ccHHH--
Confidence 46899999999999999999 788999999975430 01111
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCC--CceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGH--PVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.++.++ .++++++|.+++... + ....|.+.+..+++..++.+|.||+|+|..
T Consensus 201 -~~~~~~~~gv--~i~~~~~v~~i~~~~---------------~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 201 -QQRALSNPKI--DVIWNSSVVEAYGDG---------------ERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp -HHHHHTCTTE--EEECSEEEEEEEESS---------------SSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred -HHHHHhCCCe--eEecCCceEEEeCCC---------------CccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 1233445666 788899999998721 1 222366665433444578999999999953
No 253
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.81 E-value=3.5e-05 Score=77.94 Aligned_cols=47 Identities=17% Similarity=0.043 Sum_probs=37.4
Q ss_pred hhhccCeEEEEeCceeEEeCC--cEEEcCCceeeccEEEEecCCCCccc
Q 010421 328 SEAEKGKIVFKRASKWWFWKG--GLEFEDNTKLEADVVILCTGYDGKKK 374 (511)
Q Consensus 328 ~~l~~g~v~v~~~~i~~~~~~--~v~~~dG~~~~~D~VI~aTG~~~~~~ 374 (511)
+.+++.+|+++.+.+..++.+ .|.+++|+++.+|.||+|||.+++.+
T Consensus 64 ~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 64 PLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp TTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred HHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 345556788888888888765 48888998899999999999987643
No 254
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.80 E-value=1.2e-05 Score=83.03 Aligned_cols=39 Identities=36% Similarity=0.560 Sum_probs=36.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+||+|||||++||+||..| .|++|+|+|+++.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 7999999999999999999 89999999999999997554
No 255
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.80 E-value=1.4e-05 Score=80.92 Aligned_cols=43 Identities=14% Similarity=0.232 Sum_probs=39.9
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
|++.+||+|||||++|+++|..| .|.+|+|+|+++.+||.+..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 66678999999999999999999 89999999999999998765
No 256
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.80 E-value=7e-05 Score=76.58 Aligned_cols=102 Identities=27% Similarity=0.343 Sum_probs=71.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .|.+|+++++.+.+. +.+ ..+++.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--------------------------------~~~-~d~~~~~ 218 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL--------------------------------ITL-EDQDIVN 218 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--------------------------------TTS-CCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC--------------------------------CCC-CCHHHHH
Confidence 46899999999999999999 889999999976541 111 0245555
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
.+++..+ + .++++++|++++... ++...|.+.+. +++..++.+|.||+|+|. .|+.
T Consensus 219 ~l~~~l~---v--~i~~~~~v~~i~~~~---------------~~~v~v~~~~~-~G~~~~i~~D~vi~a~G~---~p~~ 274 (466)
T 3l8k_A 219 TLLSILK---L--NIKFNSPVTEVKKIK---------------DDEYEVIYSTK-DGSKKSIFTNSVVLAAGR---RPVI 274 (466)
T ss_dssp HHHHHHC---C--CEECSCCEEEEEEEE---------------TTEEEEEECCT-TSCCEEEEESCEEECCCE---EECC
T ss_pred HHHhcCE---E--EEEECCEEEEEEEcC---------------CCcEEEEEEec-CCceEEEEcCEEEECcCC---Cccc
Confidence 5555443 5 788999999998731 14445655521 233347899999999995 4555
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 275 ~ 275 (466)
T 3l8k_A 275 P 275 (466)
T ss_dssp C
T ss_pred c
Confidence 4
No 257
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.80 E-value=0.00011 Score=71.02 Aligned_cols=94 Identities=16% Similarity=0.123 Sum_probs=66.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+. ..+.+.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~------------------------------------~~~~l~~ 198 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM------------------------------------CENAYVQ 198 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC------------------------------------SCHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC------------------------------------CCHHHHH
Confidence 36899999999999999999 778999999864330 0122323
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCC-ceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHP-VWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.++ .++++++|+++... ++ .-.|.+.+..+++..++.+|.||+|+|..
T Consensus 199 ----~l~~~gv--~i~~~~~v~~i~~~----------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 199 ----EIKKRNI--PYIMNAQVTEIVGD----------------GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ----HHHHTTC--CEECSEEEEEEEES----------------SSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ----HHhcCCc--EEEcCCeEEEEecC----------------CceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 3335677 88999999999872 22 22466664323444468999999999954
No 258
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.79 E-value=4.1e-05 Score=76.15 Aligned_cols=45 Identities=16% Similarity=0.088 Sum_probs=35.4
Q ss_pred hhccCeEEEEeC-ceeEEeCC--cEEEcCCceeeccEEEEecCCCCcc
Q 010421 329 EAEKGKIVFKRA-SKWWFWKG--GLEFEDNTKLEADVVILCTGYDGKK 373 (511)
Q Consensus 329 ~l~~g~v~v~~~-~i~~~~~~--~v~~~dG~~~~~D~VI~aTG~~~~~ 373 (511)
.+++.+|+++.+ .+.+++.+ .|.+++|+++.+|.+|+|||.++..
T Consensus 71 ~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~ 118 (385)
T 3klj_A 71 WYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANK 118 (385)
T ss_dssp HHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECC
T ss_pred HHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCC
Confidence 344557888877 48888754 4889999999999999999987653
No 259
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.79 E-value=9.7e-05 Score=71.17 Aligned_cols=95 Identities=22% Similarity=0.248 Sum_probs=69.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+. . .+ .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~--------------------------------~----~~---~ 194 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK--------------------------------A----QP---I 194 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC--------------------------------S----CH---H
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC--------------------------------c----CH---H
Confidence 46899999999999999999 888999999975431 1 11 2
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+++...++.++ .++++++|.+++.. +....|.+.+..+++..++.+|.||+|+|..
T Consensus 195 ~~~~~~~~~gv--~~~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 195 YVETVKKKPNV--EFVLNSVVKEIKGD----------------KVVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHHTCTTE--EEECSEEEEEEEES----------------SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhCCCc--EEEeCCEEEEEecc----------------CceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 33444445577 78889999999872 2334577776443444578999999999954
No 260
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.77 E-value=8.8e-05 Score=71.26 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=65.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+. ..+++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~------------------------------------~~~~~-- 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR------------------------------------CAPIT-- 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC------------------------------------SCHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC------------------------------------CCHHH--
Confidence 47899999999999999999 788999999865330 01122
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+...++.++ .++++++|.++.... ++...|.+.+..+++..++.+|.||+|+|..
T Consensus 185 -~~~l~~~~gv--~v~~~~~v~~i~~~~---------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 185 -LEHAKNNDKI--EFLTPYVVEEIKGDA---------------SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp -HHHHHTCTTE--EEETTEEEEEEEEET---------------TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred -HHHHhhCCCe--EEEeCCEEEEEECCC---------------CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 2222233566 778899999998621 1222466664333444578999999999953
No 261
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.76 E-value=1.5e-05 Score=81.80 Aligned_cols=54 Identities=26% Similarity=0.503 Sum_probs=42.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCCCcCccccCCCcCceeccCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASDSIGGIWKSCSYNSTKLQSH 54 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~~~GG~w~~~~~~~~~~~~~ 54 (511)
|++.+||+|||||++|+++|..| .|. +|+|+|+++.+||.+....+.+..++..
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g 57 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELG 57 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeC
Confidence 34568999999999999999999 788 8999999999999988755555555443
No 262
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.75 E-value=0.00021 Score=75.51 Aligned_cols=105 Identities=16% Similarity=0.122 Sum_probs=72.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||||..|+.+|..| .|.+|+++++. .+. +. ..+++.+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l--------------------------------~~--~d~~~~~ 330 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL--------------------------------RG--FDQQMAE 330 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS--------------------------------TT--SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc--------------------------------Cc--CCHHHHH
Confidence 35799999999999999999 88999999985 220 11 1246677
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEc-----CCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFT-----GSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYG 156 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~ 156 (511)
++.+..++.++ .+++++++.++... .+. ..+...+.+...+ ++...+.+|.||+|+|.
T Consensus 331 ~~~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~~~------------~~~~~~v~~~~~~-g~~~~~~~D~vi~a~G~-- 393 (598)
T 2x8g_A 331 KVGDYMENHGV--KFAKLCVPDEIKQLKVVDTENN------------KPGLLLVKGHYTD-GKKFEEEFETVIFAVGR-- 393 (598)
T ss_dssp HHHHHHHHTTC--EEEETEEEEEEEEEECCBTTTT------------BCCEEEEEEEETT-SCEEEEEESEEEECSCE--
T ss_pred HHHHHHHhCCC--EEEECCeEEEEEeccccccccC------------CCceEEEEEEeCC-CcEEeccCCEEEEEeCC--
Confidence 78888888888 89999888887642 110 0244455543222 33334569999999995
Q ss_pred CCCCC
Q 010421 157 DVPII 161 (511)
Q Consensus 157 ~~p~~ 161 (511)
.|+.
T Consensus 394 -~p~~ 397 (598)
T 2x8g_A 394 -EPQL 397 (598)
T ss_dssp -EECG
T ss_pred -cccc
Confidence 4554
No 263
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.73 E-value=2e-05 Score=77.90 Aligned_cols=39 Identities=26% Similarity=0.429 Sum_probs=36.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+||+|||||++|+++|..| .|.+|+|+|+++.+||....
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 6999999999999999999 78999999999999998765
No 264
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.73 E-value=1.8e-05 Score=81.82 Aligned_cols=41 Identities=39% Similarity=0.597 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
..+||+|||||++||++|..| .|++|+|+|+++.+||.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~ 74 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRT 74 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceee
Confidence 357999999999999999999 89999999999999997643
No 265
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.72 E-value=8.7e-05 Score=72.25 Aligned_cols=95 Identities=19% Similarity=0.170 Sum_probs=65.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|..|+.+|..| .+.+|+++++.+.+. . .+.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~--------------------------------~----~~~~-- 196 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR--------------------------------A----SKIM-- 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS--------------------------------S----CTTH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC--------------------------------c----cHHH--
Confidence 47899999999999999999 788999999875430 0 0011
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.+.+.++.++ .++++++|++++.. ++...|.+++..+++..++.+|.||+|+|..
T Consensus 197 -~~~~~~~~gV--~v~~~~~v~~i~~~----------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 197 -LDRARNNDKI--RFLTNHTVVAVDGD----------------TTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp -HHHHHHCTTE--EEECSEEEEEEECS----------------SSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred -HHHHhccCCc--EEEeCceeEEEecC----------------CcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 1223345666 78889999999862 2222466654323333478999999999953
No 266
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.71 E-value=8.4e-05 Score=76.61 Aligned_cols=95 Identities=19% Similarity=0.269 Sum_probs=70.3
Q ss_pred CeEEEECCCHHHHHHHHhc--c--------------CCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R--------------HHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNR 68 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~--------------g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (511)
..++|||||+.|+.+|..| . +.+|+++|+.+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 3699999999999999877 1 25799999987651
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeC-CCC--ceeEEEe
Q 010421 69 DDPGFPSYTEILDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTH-NSN--SIQRYGF 145 (511)
Q Consensus 69 ~~~~~~~~~~~~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~--~~~~~~~ 145 (511)
+.+ .+++.+++++..++.|+ .++++++|++++.. .+.+... .++ ...++.|
T Consensus 268 --~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~~--------------------~~~~~~~~~dg~~~~~~i~a 321 (502)
T 4g6h_A 268 --NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEEK--------------------QLLAKTKHEDGKITEETIPY 321 (502)
T ss_dssp --TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECSS--------------------EEEEEEECTTSCEEEEEEEC
T ss_pred --cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeCC--------------------ceEEEEEecCcccceeeecc
Confidence 222 36788999999999999 89999999998751 1322221 112 1236899
Q ss_pred CEEEEeeccc
Q 010421 146 EFLVVCTGKY 155 (511)
Q Consensus 146 d~vVlAtG~~ 155 (511)
|.||.|+|..
T Consensus 322 d~viwa~Gv~ 331 (502)
T 4g6h_A 322 GTLIWATGNK 331 (502)
T ss_dssp SEEEECCCEE
T ss_pred CEEEEccCCc
Confidence 9999999954
No 267
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.67 E-value=2.9e-05 Score=78.87 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=39.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
|...+||+|||+|.+|+++|..| .|.+|+++|+++.+||.+..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 44568999999999999999999 99999999999999998765
No 268
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.62 E-value=3.9e-05 Score=75.64 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|++.+||+|||||++|+++|.+| .|.+|+|+|+..
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 55678999999999999999999 899999999965
No 269
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.59 E-value=0.00025 Score=73.49 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=69.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.+. . . .
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~--------------------------------~----~----~ 394 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK--------------------------------A----D----Q 394 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC--------------------------------S----C----H
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC--------------------------------c----C----H
Confidence 46899999999999999999 788999999865430 0 0 2
Q ss_pred HHHHHHHh-cCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCce-EEEEEeCCCCceeEEEeCEEEEeecccCCCC
Q 010421 82 YLESYAKH-FDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVW-EVAVQTHNSNSIQRYGFEFLVVCTGKYGDVP 159 (511)
Q Consensus 82 yl~~~~~~-~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p 159 (511)
++.+..++ .++ .++++++|+++... +++. .|.+.+..+++..++.+|.||+|+|. .|
T Consensus 395 ~l~~~l~~~~gV--~v~~~~~v~~i~~~----------------~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~---~p 453 (521)
T 1hyu_A 395 VLQDKVRSLKNV--DIILNAQTTEVKGD----------------GSKVVGLEYRDRVSGDIHSVALAGIFVQIGL---LP 453 (521)
T ss_dssp HHHHHHTTCTTE--EEECSEEEEEEEEC----------------SSSEEEEEEEETTTCCEEEEECSEEEECCCE---EE
T ss_pred HHHHHHhcCCCc--EEEeCCEEEEEEcC----------------CCcEEEEEEEeCCCCceEEEEcCEEEECcCC---CC
Confidence 23333334 366 78889999999862 2232 46677654455557899999999995 45
Q ss_pred CC
Q 010421 160 II 161 (511)
Q Consensus 160 ~~ 161 (511)
+.
T Consensus 454 n~ 455 (521)
T 1hyu_A 454 NT 455 (521)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 270
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.52 E-value=0.00026 Score=67.82 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=67.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|+.|+.+|..| .+.+|+++++.+.+. ... .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~------------------------------------~~~---~ 187 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR------------------------------------AAP---S 187 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB------------------------------------SCH---H
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC------------------------------------CCH---H
Confidence 46899999999999999999 788999999875430 011 2
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
+++...++.++ .++++++|.+++... +....|.+. ..+++..++.+|.||+|+|..
T Consensus 188 ~~~~~~~~~gv--~~~~~~~v~~i~~~~---------------~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 188 TVEKVKKNEKI--ELITSASVDEVYGDK---------------MGVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHHCTTE--EEECSCEEEEEEEET---------------TEEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHHhcCCe--EEEeCcEEEEEEcCC---------------CcEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 33444456677 788899999998731 122336665 223444578999999999954
No 271
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.51 E-value=0.00025 Score=76.15 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=69.0
Q ss_pred CCeEEEEC--CCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 4 YSKIAIIG--AGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 4 ~~~v~IIG--aG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
.++|+||| +|..|+.+|..| .|.+|+++++.+.+..... ....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~---------------------------------~~~~ 569 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN---------------------------------NTFE 569 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG---------------------------------GGTC
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc---------------------------------cchh
Confidence 46799999 999999999999 8899999999765432110 0112
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
...+.+.+++.++ .++.+++|++++. + .+.+....++...++.+|.||+|+|..
T Consensus 570 ~~~l~~~l~~~GV--~i~~~~~V~~i~~-----------------~---~~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 570 VNRIQRRLIENGV--ARVTDHAVVAVGA-----------------G---GVTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHHHTTC--EEEESEEEEEEET-----------------T---EEEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHHHCCC--EEEcCcEEEEEEC-----------------C---eEEEEEccCCeEEEEECCEEEECCCCC
Confidence 4455666777888 8999999999985 1 133433222233478999999999953
No 272
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.44 E-value=7.7e-05 Score=79.71 Aligned_cols=41 Identities=44% Similarity=0.639 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
+.++|+|||||++||++|..| .|++|+|+|+++.+||.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 357999999999999999999 89999999999999997654
No 273
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.41 E-value=9.7e-05 Score=80.50 Aligned_cols=41 Identities=44% Similarity=0.639 Sum_probs=37.2
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
..++|+|||||++||++|..| .|++|+|||+++.+||.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 357999999999999999999 89999999999999997654
No 274
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.41 E-value=0.00049 Score=66.00 Aligned_cols=100 Identities=17% Similarity=0.216 Sum_probs=63.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHH
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILD 81 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (511)
.++|+|||+|..|+.+|..| .|.+|+|+++.... ... ...
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~-----------------------------------~~~-~~~-- 193 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF-----------------------------------RAS-KTM-- 193 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-----------------------------------CSC-HHH--
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc-----------------------------------ccc-chh--
Confidence 46899999999999999999 88999999985322 001 111
Q ss_pred HHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeecccCCCCCC
Q 010421 82 YLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKYGDVPII 161 (511)
Q Consensus 82 yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~~~~p~~ 161 (511)
........+. .....+.+..+.... ...-.+.+.+...+...++.+|.|++|+|. .|+.
T Consensus 194 -~~~~~~~~~~--~~~~~~~~~~i~~~~---------------~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~---~pn~ 252 (314)
T 4a5l_A 194 -QERVLNHPKI--EVIWNSELVELEGDG---------------DLLNGAKIHNLVSGEYKVVPVAGLFYAIGH---SPNS 252 (314)
T ss_dssp -HHHHHTCTTE--EEECSEEEEEEEESS---------------SSEEEEEEEETTTCCEEEEECSEEEECSCE---EESC
T ss_pred -hhhhhcccce--eeEeeeeeEEEEeee---------------eccceeEEeecccccceeeccccceEeccc---ccCh
Confidence 1122222233 455666777776531 111235555544445558999999999994 5665
Q ss_pred C
Q 010421 162 P 162 (511)
Q Consensus 162 p 162 (511)
.
T Consensus 253 ~ 253 (314)
T 4a5l_A 253 K 253 (314)
T ss_dssp G
T ss_pred h
Confidence 4
No 275
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.41 E-value=8.7e-05 Score=78.53 Aligned_cols=40 Identities=18% Similarity=0.298 Sum_probs=35.1
Q ss_pred CCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccc
Q 010421 2 ANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIW 41 (511)
Q Consensus 2 ~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w 41 (511)
...+||+|||||++|+.+|..| .|++|+|+|+.+..||.+
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3457999999999999999999 899999999998888755
No 276
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.40 E-value=0.00084 Score=68.45 Aligned_cols=33 Identities=9% Similarity=0.033 Sum_probs=29.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 47899999999999999999 8899999998754
No 277
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.38 E-value=7.3e-05 Score=75.62 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+.+||+|||||++|+++|..| .|++|+|+|+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 347999999999999999999 999999999975
No 278
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.32 E-value=0.00073 Score=64.63 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=27.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.|+|||+|+.|+-.|..+++.+.+ |+++.+..
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~-----v~lie~~~ 39 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQ-----IALFDNNT 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEEECSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC-----EEEEeCCC
Confidence 699999999999999999988754 99998753
No 279
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.20 E-value=0.00034 Score=69.31 Aligned_cols=48 Identities=19% Similarity=0.122 Sum_probs=36.4
Q ss_pred chhhhhccCeEEEEeCc-eeEEeCC-cEEEcCCceeeccEEEEecCCCCc
Q 010421 325 GFFSEAEKGKIVFKRAS-KWWFWKG-GLEFEDNTKLEADVVILCTGYDGK 372 (511)
Q Consensus 325 ~~~~~l~~g~v~v~~~~-i~~~~~~-~v~~~dG~~~~~D~VI~aTG~~~~ 372 (511)
.+.+.+.+.+++++.+. +.+++.+ .|++.||+++.+|.||.|+|....
T Consensus 112 ~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 112 ALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTCH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccHH
Confidence 34455566678888775 7777544 577889989999999999999763
No 280
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.19 E-value=0.0014 Score=66.67 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHhc-c---------------------CC-CcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-R---------------------HH-NPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~---------------------g~-~v~v~e~~~~~ 37 (511)
.++|+|||+|..|+.+|..| . +. +|+|++++..+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999998 3 44 89999997644
No 281
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.19 E-value=0.00089 Score=65.26 Aligned_cols=31 Identities=23% Similarity=0.352 Sum_probs=26.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|+|||+|.+|+.+|..| .+ +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 46899999999999999999 44 799998863
No 282
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.14 E-value=0.00034 Score=72.05 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=31.7
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
...+|+|||||.+|+.+|..|++.+.+ |+++.+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~-----V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGAR-----VVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCe-----EEEEEeccc
Confidence 467899999999999999999998754 999999864
No 283
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.13 E-value=0.00018 Score=70.45 Aligned_cols=32 Identities=28% Similarity=0.449 Sum_probs=28.9
Q ss_pred CeEEEECCCHHHHHHHHhc--cC------CCcEEEcCCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RH------HNPVVFEASDS 36 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g------~~v~v~e~~~~ 36 (511)
+||+|||||++|+++|.+| .| .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 4899999999999999999 66 89999999763
No 284
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.09 E-value=0.00098 Score=67.60 Aligned_cols=32 Identities=13% Similarity=0.086 Sum_probs=28.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCC-cEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHN-PVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~-v~v~e~~~ 35 (511)
.++|+|||+|.+|+.+|..| .+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999 7777 99999864
No 285
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.02 E-value=0.005 Score=58.86 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~ 37 (511)
.++|+|||||+.|+.+|..| .|.+|+|+|+.+.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 46899999999999999999 78899999997543
No 286
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.00 E-value=0.0015 Score=72.64 Aligned_cols=95 Identities=23% Similarity=0.247 Sum_probs=67.3
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHHHHH
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEILDY 82 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 82 (511)
++|+|||+|+.|+.+|..| .|.+|+|+|+.+.+. . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~--------------------------------~------~---- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS--------------------------------A------A---- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------------------------------H------H----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------------------------------h------h----
Confidence 6899999999999999999 788999999975430 0 1
Q ss_pred HHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEe--CC--CCceeEEEeCEEEEeecccCCC
Q 010421 83 LESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQT--HN--SNSIQRYGFEFLVVCTGKYGDV 158 (511)
Q Consensus 83 l~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~~~~~~~~d~vVlAtG~~~~~ 158 (511)
.+.+++.++ .++++++|+++.... .+....|++.+ .. +++..++.+|.||+|+|. .
T Consensus 323 -~~~l~~~GV--~v~~~~~v~~i~~~~--------------~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~---~ 382 (965)
T 2gag_A 323 -AAQAVADGV--QVISGSVVVDTEADE--------------NGELSAIVVAELDEARELGGTQRFEADVLAVAGGF---N 382 (965)
T ss_dssp -HHHHHHTTC--CEEETEEEEEEEECT--------------TSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE---E
T ss_pred -HHHHHhCCe--EEEeCCEeEEEeccC--------------CCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc---C
Confidence 233566788 899999999998620 02222466654 10 122347899999999994 4
Q ss_pred CCC
Q 010421 159 PII 161 (511)
Q Consensus 159 p~~ 161 (511)
|+.
T Consensus 383 P~~ 385 (965)
T 2gag_A 383 PVV 385 (965)
T ss_dssp ECC
T ss_pred cCh
Confidence 554
No 287
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.94 E-value=0.00063 Score=66.45 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIG 38 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~G 38 (511)
+||+|||||++|+.+|..| .|.+|+|+|++...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 6999999999999999999 899999999987543
No 288
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.93 E-value=0.0013 Score=66.78 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCC-cEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHN-PVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~-v~v~e~~~~ 36 (511)
.++|+|||+|..|+.+|..+ .|.+ |+++++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 46899999999999999988 7774 999998753
No 289
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.88 E-value=0.00031 Score=74.63 Aligned_cols=34 Identities=35% Similarity=0.565 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC--------CCcEEEcCCC-Cc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH--------HNPVVFEASD-SI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g--------~~v~v~e~~~-~~ 37 (511)
.++|+|||||++||++|..| .| ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 36899999999999999999 66 8999999998 88
No 290
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.85 E-value=0.0014 Score=65.30 Aligned_cols=34 Identities=12% Similarity=0.083 Sum_probs=30.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.|++.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~-----V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHR-----VVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc-----EEEEeCCCC
Confidence 4799999999999999999998765 999999864
No 291
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.82 E-value=0.0013 Score=71.00 Aligned_cols=68 Identities=7% Similarity=0.034 Sum_probs=49.4
Q ss_pred CCeEEEEC--CCHHHHHHHHhc--cCCCcEEEcCCCCcCccccCCCcCceeccCCCCccccCCCCCCCCCCCCCCChHHH
Q 010421 4 YSKIAIIG--AGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKSCSYNSTKLQSHRSDYEFTDFPWPNRDDPGFPSYTEI 79 (511)
Q Consensus 4 ~~~v~IIG--aG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (511)
.++|+||| +|..|+.+|..| .|.+|+|+++.+ +...- .+...
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~------------------------------~~~~~--- 573 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM------------------------------HFTLE--- 573 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH------------------------------HHTTC---
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc------------------------------ccccc---
Confidence 46899999 999999999999 889999999975 42100 00000
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEE
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRF 107 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~ 107 (511)
...+.+..++.++ .++++++|++++.
T Consensus 574 ~~~~~~~l~~~GV--~i~~~~~v~~i~~ 599 (729)
T 1o94_A 574 YPNMMRRLHELHV--EELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHHHTTC--EEECSEEEEEEET
T ss_pred HHHHHHHHHhCCC--EEEcCcEEEEEEC
Confidence 2344555567788 8999999999874
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.82 E-value=0.0021 Score=68.72 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 80 LDYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 80 ~~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
..++....++.++ .++++++|++++. ++ +.+.. +++..++.+|.||+|+|..
T Consensus 576 ~~~~~~~l~~~GV--~v~~~~~v~~i~~-----------------~~---v~~~~--~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 576 GWIHRTTLLSRGV--KMIPGVSYQKIDD-----------------DG---LHVVI--NGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHHTTC--EEECSCEEEEEET-----------------TE---EEEEE--TTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHHhcCC--EEEeCcEEEEEeC-----------------Ce---EEEec--CCeEEEEeCCEEEECCCcc
Confidence 4455666677888 8999999998873 21 44431 2333478999999999953
No 293
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.81 E-value=0.0046 Score=62.79 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=27.9
Q ss_pred CCeEEEECCCHHHHHHHHhc-c---------------------CC-CcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-R---------------------HH-NPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~---------------------g~-~v~v~e~~~~ 36 (511)
.++|+|||+|..|+.+|..| . +. +|+|++++..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 47899999999999999988 3 45 6999999754
No 294
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.78 E-value=0.0011 Score=66.45 Aligned_cols=35 Identities=14% Similarity=0.221 Sum_probs=30.3
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|+-+|..|++.+.+ |+++.+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~-----V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRR-----VLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 35799999999999999999998765 999998764
No 295
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.78 E-value=0.0015 Score=68.41 Aligned_cols=46 Identities=15% Similarity=0.065 Sum_probs=34.8
Q ss_pred hhhhhcc-CeEEEEeCceeEEe--CC---cEEEcCCceeeccEEEEecCCCC
Q 010421 326 FFSEAEK-GKIVFKRASKWWFW--KG---GLEFEDNTKLEADVVILCTGYDG 371 (511)
Q Consensus 326 ~~~~l~~-g~v~v~~~~i~~~~--~~---~v~~~dG~~~~~D~VI~aTG~~~ 371 (511)
+.+.+++ .++++..+.+..+. ++ +|++.+|.++.+|.||+|||-.+
T Consensus 130 L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 130 VRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 4455665 68888777787774 33 36778898899999999999864
No 296
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.75 E-value=0.002 Score=64.18 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=30.9
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|+-+|..|++.+.. |+++.|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~-----v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVD-----VDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCC-----EEEEecCCC
Confidence 35899999999999999999998754 999999875
No 297
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.73 E-value=0.0021 Score=66.48 Aligned_cols=48 Identities=10% Similarity=0.124 Sum_probs=36.3
Q ss_pred chhhhhccCeEEEEeCc-eeEEeC--C---cEEEcCCceeeccEEEEecCCCCc
Q 010421 325 GFFSEAEKGKIVFKRAS-KWWFWK--G---GLEFEDNTKLEADVVILCTGYDGK 372 (511)
Q Consensus 325 ~~~~~l~~g~v~v~~~~-i~~~~~--~---~v~~~dG~~~~~D~VI~aTG~~~~ 372 (511)
.+.+.+.+.+++++.+. +.++.. + +|.+.+|+++.+|.||+|||..+.
T Consensus 225 ~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 225 KMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 34455666678888775 777642 2 277889999999999999999884
No 298
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.71 E-value=0.0025 Score=60.30 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=29.5
Q ss_pred CcEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAES-NQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~-~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+.+|..|++. +. +|+++.+.+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~-----~V~viEk~~~ 74 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNV-----QVAIIEQSVS 74 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTS-----CEEEEESSSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCC-----eEEEEECCCC
Confidence 4799999999999999999985 54 4999999763
No 299
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.69 E-value=0.0056 Score=63.52 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
.++|+|||+|.+|+.+|..| .+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999 7889999999875
No 300
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.66 E-value=0.0014 Score=68.65 Aligned_cols=43 Identities=16% Similarity=0.340 Sum_probs=39.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcCccccC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIGGIWKS 43 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~GG~w~~ 43 (511)
|++.+||+|||+|..|...|..| .|.+|+++|++++.||.|..
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 45679999999999999999999 99999999999999999876
No 301
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.65 E-value=0.0011 Score=69.03 Aligned_cols=33 Identities=12% Similarity=0.071 Sum_probs=29.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~-----v~iiE~~~ 54 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLT-----VRAFEAAS 54 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECchHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 4799999999999999999987654 99999865
No 302
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.61 E-value=0.0018 Score=67.10 Aligned_cols=34 Identities=24% Similarity=0.399 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~~~ 37 (511)
.+|+||||||++|+.+|.+| .+++|+|+|+....
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 58999999999999999999 56899999997653
No 303
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.50 E-value=0.0069 Score=58.44 Aligned_cols=33 Identities=9% Similarity=0.240 Sum_probs=29.7
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.|++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~-----V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ-----VHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc-----EEEEECCC
Confidence 4799999999999999999998765 99999875
No 304
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.50 E-value=0.0035 Score=65.49 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=35.5
Q ss_pred chhhhhcc-CeEEEEeCceeEEe--CC---cEEEcCCceeeccEEEEecCCCCc
Q 010421 325 GFFSEAEK-GKIVFKRASKWWFW--KG---GLEFEDNTKLEADVVILCTGYDGK 372 (511)
Q Consensus 325 ~~~~~l~~-g~v~v~~~~i~~~~--~~---~v~~~dG~~~~~D~VI~aTG~~~~ 372 (511)
.+.+.+.+ .+|++..+.+..+. ++ +|++.+|.++.+|.||+|||-.+.
T Consensus 128 ~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 128 YMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp HHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred HHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 34455655 68888777777764 33 377889989999999999998654
No 305
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.49 E-value=0.003 Score=66.17 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=29.6
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||||.+|+++|..+++.+.+ |.++.+.+
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~G~k-----VlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARGGLH-----CLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHHCCCc-----EEEEEecc
Confidence 4799999999999999999998765 99999874
No 306
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.42 E-value=0.011 Score=66.10 Aligned_cols=31 Identities=10% Similarity=0.175 Sum_probs=27.9
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
.+|+|||||..|+.+|..+ .|. +|+|+++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 5899999999999999999 776 799999964
No 307
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.35 E-value=0.0034 Score=62.62 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=31.2
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+..+|+|||+|.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~-----V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGID-----CDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC-----EEEEeCCCC
Confidence 3456899999999999999999998764 999999864
No 308
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.35 E-value=0.0082 Score=58.25 Aligned_cols=33 Identities=12% Similarity=-0.019 Sum_probs=28.3
Q ss_pred CcEEEECCCCCHHHHHHHHHH---hcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAE---SNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~---~~~~~~~~~Vtl~~R~~ 235 (511)
++|+|||+|.+|+-+|..|++ .+. +|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~-----~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL-----YLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE-----EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc-----eEEEEECCC
Confidence 369999999999999999998 543 599999874
No 309
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.34 E-value=0.0014 Score=68.03 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHhc-cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~g~~v~v~e~~~~~ 37 (511)
.+|++|||||.+|+.+|.+| .+.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhcCCcEEEEecCCCc
Confidence 47999999999999999999 88999999998664
No 310
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.33 E-value=0.013 Score=61.38 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=30.6
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~-----V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK-----VILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 35799999999999999999998765 999998764
No 311
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.32 E-value=0.0025 Score=66.39 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=31.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
..+|++|||+|++|+.+|.+| .|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 358999999999999999999 8999999999764
No 312
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.32 E-value=0.0033 Score=63.67 Aligned_cols=47 Identities=11% Similarity=0.174 Sum_probs=35.2
Q ss_pred chhhhhccCeEEEEeCc-eeEEe--CCc---EEEcCCceeeccEEEEecCCCC
Q 010421 325 GFFSEAEKGKIVFKRAS-KWWFW--KGG---LEFEDNTKLEADVVILCTGYDG 371 (511)
Q Consensus 325 ~~~~~l~~g~v~v~~~~-i~~~~--~~~---v~~~dG~~~~~D~VI~aTG~~~ 371 (511)
.+.+.+++.+|+++.+. +.++. +++ |.+.+|+++.+|.||+|||-..
T Consensus 139 ~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 139 ALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 44556666778888764 76664 333 6778887799999999999887
No 313
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.24 E-value=0.0047 Score=61.22 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=30.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|.-+|..|++.+.+ |+++.|.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~-----v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGID-----NVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 3699999999999999999998765 999998763
No 314
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.19 E-value=0.0026 Score=66.09 Aligned_cols=33 Identities=15% Similarity=-0.000 Sum_probs=29.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.. |+++.+.+
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~-----v~iiE~~~ 42 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMK-----VLGIEAGE 42 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 4799999999999999999987654 99999875
No 315
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.16 E-value=0.0033 Score=62.66 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=30.0
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~-----V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKS-----VTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCC-----EEEEeCCCC
Confidence 3699999999999999999998765 999999764
No 316
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.15 E-value=0.0038 Score=62.47 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=29.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||||.+|.-+|..|++.+.+ |+++.|.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~-----V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFK-----VKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-----EEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 4799999999999999999988765 99999875
No 317
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.15 E-value=0.011 Score=58.84 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=30.6
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|+-+|..|++.+.. |+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~-----v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGID-----VSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCE-----EEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 45899999999999999999988754 999999764
No 318
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.08 E-value=0.0035 Score=65.40 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~ 35 (511)
..+|+||||||.||+.+|.+| .+.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999 478999999976
No 319
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.03 E-value=0.0054 Score=64.31 Aligned_cols=35 Identities=17% Similarity=0.159 Sum_probs=30.5
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
...+|+|||||.+|.-+|..|++.+.+ |+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~-----V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHD-----VTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCC-----EEEEcCCC
Confidence 346899999999999999999998754 99999874
No 320
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.99 E-value=0.017 Score=56.77 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=29.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~-----V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEE-----VTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCe-----EEEEeCCC
Confidence 4799999999999999999998754 99999864
No 321
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.99 E-value=0.0057 Score=55.16 Aligned_cols=36 Identities=28% Similarity=0.215 Sum_probs=31.3
Q ss_pred ccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 194 LLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 194 ~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
...+++|+|||+|.+|...+..|.+.+.. |+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~-----VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAA-----ITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCC-----EEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCE-----EEEECCC
Confidence 36899999999999999999999998875 9988653
No 322
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.94 E-value=0.0046 Score=64.56 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=30.1
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASDS 36 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~~ 36 (511)
..+|+||||||.||+.+|.+| .+ .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 358999999999999999999 44 79999999765
No 323
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.91 E-value=0.0052 Score=63.31 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
..+|++|||+|++|+.+|..| .+.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999 8999999999754
No 324
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.86 E-value=0.0055 Score=63.07 Aligned_cols=36 Identities=17% Similarity=0.307 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCcC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSIG 38 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~G 38 (511)
..+|++|||+|++|+.+|..| .+.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 357999999999999999999 899999999987553
No 325
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.78 E-value=0.0067 Score=63.39 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=29.9
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|.-+|..|++.+.+ |+++.|.+.
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~-----V~VlEr~~~ 83 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVG-----ALVLEKLVE 83 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCC-----EEEEBSCSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-----EEEEcCCCC
Confidence 4799999999999999999998765 999999764
No 326
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.78 E-value=0.066 Score=55.82 Aligned_cols=34 Identities=12% Similarity=0.249 Sum_probs=30.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
-+|+|||+|.+|+-+|..|++.+.+ |+++.+.+.
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~-----V~vlEk~~~ 155 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGAN-----VILVDKAPF 155 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCC-----EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 3799999999999999999998765 999998764
No 327
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.74 E-value=0.021 Score=57.46 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=29.8
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.. +|+++.+.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~----~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYT----NVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCC----CEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCC----cEEEEeCCC
Confidence 4799999999999999999998761 399999975
No 328
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.73 E-value=0.02 Score=56.71 Aligned_cols=33 Identities=12% Similarity=0.055 Sum_probs=29.5
Q ss_pred CcEEEECCCCCHHHHHHHHHH-hc-CCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAE-SN-QGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~-~~-~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++ .+ .+ |+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~-----V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITN-----VAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCC-----EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCc-----EEEEeCCC
Confidence 479999999999999999999 77 54 99999875
No 329
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.65 E-value=0.034 Score=57.03 Aligned_cols=33 Identities=18% Similarity=0.305 Sum_probs=28.2
Q ss_pred CCeEEEECCCHHHHHHHHhc----cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL----RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l----~g~~v~v~e~~~~ 36 (511)
.++|+|||+|.+|+.++..| .+.+|+++-|+..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 47899999999999999998 3678999988653
No 330
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.64 E-value=0.0052 Score=62.34 Aligned_cols=34 Identities=9% Similarity=0.024 Sum_probs=29.7
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||||.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~-----V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLK-----ILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCC-----EEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCCC
Confidence 3799999999999999999987754 999999764
No 331
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.62 E-value=0.0066 Score=60.10 Aligned_cols=33 Identities=24% Similarity=0.174 Sum_probs=29.7
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
+|+|||+|.+|.-+|..|++.+.+ |+++.|.+.
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~-----V~l~E~~~~ 38 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLK-----TLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 699999999999999999998765 999999863
No 332
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.61 E-value=0.083 Score=54.25 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=29.5
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+|||+|.+|+-+|..+++.+.+ |+++.+.+.
T Consensus 43 DVvVVGaG~AGl~AA~~aa~~G~~-----V~vlEk~~~ 75 (510)
T 4at0_A 43 DVVVAGYGIAGVAASIEAARAGAD-----VLVLERTSG 75 (510)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 699999999999999999998765 999998764
No 333
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=95.59 E-value=0.0052 Score=64.00 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~~~ 37 (511)
.+|++|||||.+|+.+|.+| .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 48999999999999999999 57899999997654
No 334
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.52 E-value=0.031 Score=59.81 Aligned_cols=34 Identities=12% Similarity=0.022 Sum_probs=30.0
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~-----V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAV-----VTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCC-----EEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCc-----EEEEeCCC
Confidence 36899999999999999999998765 99999863
No 335
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=95.51 E-value=0.028 Score=55.64 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
||+|||+|.+|.=+|..|++.+.. |+++.|++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~-----v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK-----VTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-----EEEEecCCC
Confidence 799999999999999999998765 999999764
No 336
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=95.45 E-value=0.025 Score=58.28 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=29.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|.-+|..|++.+.+ |+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~-----V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHR-----VLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-----EEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC-----EEEEccCC
Confidence 4799999999999999999987654 99999876
No 337
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.44 E-value=0.054 Score=56.55 Aligned_cols=35 Identities=9% Similarity=0.212 Sum_probs=30.4
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|+.+|..+++.+.+ |+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~-----v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAK-----VILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCC-----EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc-----EEEEecCCC
Confidence 45899999999999999999987754 999998764
No 338
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.43 E-value=0.01 Score=61.73 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=30.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc--c-CCCcEEEcCCCCc
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--R-HHNPVVFEASDSI 37 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~-g~~v~v~e~~~~~ 37 (511)
+.+|++|||+|++|+.+|.+| . +.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999 4 7999999997654
No 339
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.25 E-value=0.036 Score=56.81 Aligned_cols=36 Identities=25% Similarity=0.248 Sum_probs=31.3
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
+..+|+|||+|.+|.=+|..|++.+.. |+++.|.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~-----v~vlE~~~~ 45 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVE-----VVVLERLVE 45 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 345799999999999999999998765 999999864
No 340
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.12 E-value=0.045 Score=56.10 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=31.0
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
..+|+|||+|.+|.=+|..|++.+.. |+++.|.+.
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~-----v~vlE~~~~ 46 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVD-----VMVLEQLPQ 46 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCCC
Confidence 35799999999999999999998765 999999864
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.10 E-value=0.033 Score=59.45 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=29.9
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~-----V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQ-----VTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE-----EEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe-----EEEEeCCC
Confidence 36899999999999999999998754 99999863
No 342
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.06 E-value=0.014 Score=61.06 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHhc---cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL---RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l---~g~~v~v~e~~~~~ 37 (511)
.+|++|||+|++|+.+|.+| .+.+|+|+|+....
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 47999999999999999999 47899999997543
No 343
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.99 E-value=0.024 Score=58.65 Aligned_cols=34 Identities=21% Similarity=0.130 Sum_probs=30.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.|.+.
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~-----v~viEr~~~ 39 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVR-----VLVVERRPG 39 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC-----EEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCC-----EEEEeCCCC
Confidence 4799999999999999999998765 999999864
No 344
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.90 E-value=0.076 Score=55.00 Aligned_cols=34 Identities=21% Similarity=0.111 Sum_probs=29.6
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+.+.
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~-----v~iiE~~~~ 50 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRS-----VHVIETAGD 50 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCC-----EEEEeCCCC
Confidence 4799999999999999999988654 999998753
No 345
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=94.02 E-value=0.034 Score=58.24 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=29.5
Q ss_pred CcEEEECCCCCHHHHHHHHHHh------cCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAES------NQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~------~~~~~~~~Vtl~~R~~~ 236 (511)
-+|+|||+|.+|.-+|..|++. +.. |+++.|.+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~-----V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLR-----VCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCC-----EEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCc-----EEEEeCCCC
Confidence 4799999999999999999998 554 999998753
No 346
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.84 E-value=0.71 Score=48.14 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=28.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.|+|||+|.+|+-+|..+++.+.+ |+++.+.+
T Consensus 9 DVvVVGaG~AGl~AA~~la~~G~~-----V~vlEK~~ 40 (588)
T 2wdq_A 9 DAVVIGAGGAGMRAALQISQSGQT-----CALLSKVF 40 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEEESSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-----EEEEecCC
Confidence 699999999999999999988765 99999975
No 347
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.78 E-value=0.046 Score=43.36 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=28.4
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEAS 34 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~ 34 (511)
+.++|+|+|+|..|..++..| .| .+|++++++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 346899999999999999999 77 889999985
No 348
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=93.73 E-value=0.054 Score=45.73 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|.-|..+|..| .|.+|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 46899999999999999999 889999999864
No 349
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.63 E-value=0.068 Score=44.26 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|..|..+|..| .|++|+++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 45799999999999999999 899999999963
No 350
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=93.60 E-value=0.055 Score=44.42 Aligned_cols=31 Identities=29% Similarity=0.402 Sum_probs=27.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|...|..| .|++|+++|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 46899999999999999999 88999999985
No 351
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.55 E-value=0.069 Score=44.92 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
..+|+|+|+|..|...|..| .|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 56899999999999999999 89999999995
No 352
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.51 E-value=0.063 Score=44.39 Aligned_cols=31 Identities=19% Similarity=0.375 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|+|+|..|..+|..| .|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 35799999999999999999 89999999985
No 353
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.49 E-value=0.046 Score=55.93 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=29.0
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++. .+ |+++.+.+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~-~~-----V~vie~~~~ 141 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY-LT-----VALIEERGW 141 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT-CC-----EEEECTTSS
T ss_pred CCEEEECccHHHHHHHHHHHhc-CC-----EEEEeCCCC
Confidence 5799999999999999999887 54 999998764
No 354
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=93.10 E-value=0.28 Score=50.67 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=28.2
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+|||+|.+|+-+|..+++ +.+ |+++.+.+.
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G~~-----V~vlEk~~~ 41 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-QHQ-----VIVLSKGPV 41 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-TSC-----EEEECSSCT
T ss_pred CEEEECccHHHHHHHHHHhc-CCc-----EEEEECCCC
Confidence 69999999999999999998 654 999998753
No 355
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.09 E-value=0.051 Score=49.95 Aligned_cols=33 Identities=9% Similarity=0.243 Sum_probs=29.7
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+|||+|++|.-+|..|++.+.. |+++.|++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~-----V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ-----VHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCCC
Confidence 599999999999999999999865 999998753
No 356
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.00 E-value=0.92 Score=47.42 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=28.8
Q ss_pred cEEEECCCCCHHHHHHHHHHhc--CCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESN--QGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~--~~~~~~~Vtl~~R~~ 235 (511)
.|+|||+|.+|+-+|..|++.+ .+ |+++.+.+
T Consensus 7 DVvIVG~G~AGl~aAl~la~~G~~~~-----V~vlEk~~ 40 (602)
T 1kf6_A 7 DLAIVGAGGAGLRAAIAAAQANPNAK-----IALISKVY 40 (602)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTCC-----EEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCc-----EEEEeCCC
Confidence 6999999999999999999987 54 99999975
No 357
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.97 E-value=0.08 Score=49.75 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=31.1
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|.+.++|+|||+|.-|...|..| .|++|+++|++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 54567999999999999999999 899999999864
No 358
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.48 E-value=0.098 Score=50.06 Aligned_cols=35 Identities=29% Similarity=0.443 Sum_probs=31.2
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
|.+.++|+|||+|..|...|..| .|+ +|+++|++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 77778999999999999999999 777 899999864
No 359
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.19 E-value=0.1 Score=52.59 Aligned_cols=35 Identities=26% Similarity=0.199 Sum_probs=30.6
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
.++++|+|||+|.+|...+..|.+.+.. |+++...
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~-----V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGAR-----LTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBE-----EEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCE-----EEEEcCC
Confidence 5789999999999999999999998765 9988653
No 360
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=92.08 E-value=0.13 Score=42.27 Aligned_cols=31 Identities=29% Similarity=0.426 Sum_probs=28.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|+|+|..|..+|..| .|.+|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35799999999999999999 88999999985
No 361
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.86 E-value=0.11 Score=49.01 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=30.0
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
|++.++|.|||.|.-|...|..| .|++|++++++..
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 33456899999999999999999 8899999999754
No 362
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=91.72 E-value=0.073 Score=54.41 Aligned_cols=49 Identities=8% Similarity=-0.033 Sum_probs=34.5
Q ss_pred CchhhhhccCeEEEEeCc-eeEEe--CC---cEEEcCCceeeccEEEEecCCCCc
Q 010421 324 EGFFSEAEKGKIVFKRAS-KWWFW--KG---GLEFEDNTKLEADVVILCTGYDGK 372 (511)
Q Consensus 324 ~~~~~~l~~g~v~v~~~~-i~~~~--~~---~v~~~dG~~~~~D~VI~aTG~~~~ 372 (511)
+.+.+.+++.+++|+.+. |++|. .+ +|+++||+++.+|.||.+++....
T Consensus 225 ~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~ 279 (501)
T 4dgk_A 225 QGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHT 279 (501)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----
T ss_pred HHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHH
Confidence 445566666677888775 87774 33 378999999999999999887653
No 363
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.60 E-value=0.16 Score=45.70 Aligned_cols=31 Identities=13% Similarity=0.236 Sum_probs=28.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||||..|...+..| .|.+|+|+++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 47899999999999999999 89999999874
No 364
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.31 E-value=0.15 Score=44.16 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=28.0
Q ss_pred CeEEEECCCHHHHHHHHhc--c-CCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R-HHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~-g~~v~v~e~~ 34 (511)
.+|+|||+|..|..+|..| . |++|+++|++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 4799999999999999999 7 9999999996
No 365
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.21 E-value=0.17 Score=49.75 Aligned_cols=32 Identities=28% Similarity=0.358 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|..|+.+|..+ .|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 36899999999999999999 899999999974
No 366
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.01 E-value=0.19 Score=48.13 Aligned_cols=35 Identities=26% Similarity=0.488 Sum_probs=29.4
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
|....+|+|||||..|..+|..| .++ +|+++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 65567999999999999999998 676 899999863
No 367
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.66 E-value=0.18 Score=49.01 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=28.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
|++.++|+|||+|..|...|..| .|++|++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 44457999999999999999999 88999999985
No 368
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=90.16 E-value=0.18 Score=50.61 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=30.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~ 37 (511)
.++|+|||.|.+|+++|..| .|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 46899999999999999888 99999999986644
No 369
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.15 E-value=0.21 Score=41.37 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=27.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|...+..| .|.+|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 46899999999999999999 77889999985
No 370
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.09 E-value=0.19 Score=48.88 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|..|+.+|+.+ .|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999 889999999964
No 371
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.03 E-value=0.19 Score=44.99 Aligned_cols=30 Identities=20% Similarity=0.380 Sum_probs=27.9
Q ss_pred eEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+|+|||+|.-|...|..| .|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 699999999999999999 899999999863
No 372
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=89.93 E-value=0.17 Score=46.91 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.+.|+|||+|-.|...+..| .|.+|+|+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 57899999999999999999 89999999985
No 373
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=89.86 E-value=0.24 Score=47.39 Aligned_cols=30 Identities=30% Similarity=0.274 Sum_probs=28.0
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
++|+|||+|.-|...|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 6899999999999999999 88999999985
No 374
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.75 E-value=0.23 Score=41.76 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=31.9
Q ss_pred hccCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 193 QLLKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 193 ~~~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
....+++|+|+|+|..|..+|..|...+.. |+++.|++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~-----V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHS-----VVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCe-----EEEEECCHH
Confidence 446788999999999999999999887654 999988753
No 375
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.67 E-value=0.23 Score=48.29 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=28.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
..+|+|+|||.+|+.+|+.| .|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35899999999999999999 888 89999996
No 376
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.52 E-value=0.29 Score=46.61 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=28.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||||.-|...|..+ .|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 46899999999999988888 999999999864
No 377
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=89.32 E-value=0.24 Score=49.91 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|+|||.|.+|+++|..| .|++|+++|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 47899999999999999998 999999999864
No 378
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.08 E-value=0.23 Score=50.14 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=30.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+.++|+|+|+|--|...|+.| .|++|+++|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 456899999999999999999 889999999865
No 379
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=89.02 E-value=0.25 Score=48.40 Aligned_cols=34 Identities=15% Similarity=0.085 Sum_probs=30.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
++|+|||+|..|++.|..+++.+.+ |+++.+++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~-----V~liE~~~~ 35 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVP-----VRLFEMRPK 35 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC-----EEEECCTTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCc-----EEEEeccCC
Confidence 4799999999999999999998765 999998764
No 380
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=88.91 E-value=0.22 Score=48.66 Aligned_cols=33 Identities=24% Similarity=0.174 Sum_probs=29.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecCc
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~~ 236 (511)
.|+|||+|++|.-+|..|++.+.+ |+++.|++.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~-----V~v~Er~~~ 38 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLK-----TLMIEKRPE 38 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCc-----EEEEeCCCC
Confidence 599999999999999999999865 999999764
No 381
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=88.86 E-value=0.27 Score=46.84 Aligned_cols=30 Identities=30% Similarity=0.316 Sum_probs=27.2
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
++|+|||+|.-|.+.|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 5799999999999999999 88999999985
No 382
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=88.82 E-value=0.29 Score=47.54 Aligned_cols=31 Identities=29% Similarity=0.349 Sum_probs=28.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
..+|+|+|||.+|..+|+.| .|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46899999999999999999 787 79999996
No 383
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=88.70 E-value=0.35 Score=45.70 Aligned_cols=31 Identities=19% Similarity=0.482 Sum_probs=28.3
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|+|||+|.-|...|..| .|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5799999999999999999 899999999863
No 384
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.54 E-value=0.29 Score=46.20 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
|.+.++|.|||+|.-|...|..| .|++|++++++
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 66677999999999999999999 88999999885
No 385
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=88.52 E-value=0.27 Score=49.64 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--c-CC-CcEEEcCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--R-HH-NPVVFEASDS 36 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~-g~-~v~v~e~~~~ 36 (511)
..++|+|||+|.-|+..|..| . |+ +|+++|++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999 7 89 9999999865
No 386
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.46 E-value=0.37 Score=45.96 Aligned_cols=32 Identities=13% Similarity=0.277 Sum_probs=28.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|+++|+++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36899999999999999999 899999999964
No 387
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.34 E-value=0.33 Score=47.94 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=28.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|..|+.++..+ .|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 46899999999999999999 888999999864
No 388
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=88.29 E-value=0.36 Score=46.35 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=27.8
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
.+|+|||||..|...|..| .|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 5899999999999999999 777 899999864
No 389
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=88.27 E-value=0.61 Score=47.37 Aligned_cols=40 Identities=13% Similarity=0.001 Sum_probs=31.6
Q ss_pred ceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 95 CVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 95 ~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
.++++++|++|+.. ++.+.|++.++. ++.||+||+|+|..
T Consensus 272 ~i~~~~~V~~i~~~----------------~~~v~v~~~~g~-----~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 272 GYVFGCPVRSVVNE----------------RDAARVTARDGR-----EFVAKRVVCTIPLN 311 (495)
T ss_dssp EEESSCCEEEEEEC----------------SSSEEEEETTCC-----EEEEEEEEECCCGG
T ss_pred EEEeCCEEEEEEEc----------------CCEEEEEECCCC-----EEEcCEEEECCCHH
Confidence 58999999999973 345777665543 68999999999965
No 390
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.26 E-value=0.21 Score=46.39 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=31.2
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
.++++|+|||+|.+|...+..|.+.+.. |+++...
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~-----VtViap~ 45 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCK-----LTLVSPD 45 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCE-----EEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCE-----EEEEcCC
Confidence 5789999999999999999999998865 9998764
No 391
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.22 E-value=0.34 Score=48.69 Aligned_cols=32 Identities=22% Similarity=0.354 Sum_probs=29.2
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
++|+|||+|.-|+..|..| .|++|+++|++..
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999 8999999998753
No 392
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=88.21 E-value=0.34 Score=45.62 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=28.2
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|+|||+|.-|...|..| .|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 5799999999999999999 789999999963
No 393
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.14 E-value=0.38 Score=46.23 Aligned_cols=33 Identities=27% Similarity=0.355 Sum_probs=28.6
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
|+ .++|+|||+|.-|...|..| .|.+|++++++
T Consensus 1 M~-~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MS-LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -C-CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CC-CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 53 46899999999999999999 88999999984
No 394
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.00 E-value=0.32 Score=49.25 Aligned_cols=35 Identities=26% Similarity=0.342 Sum_probs=30.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--c--CCCcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--R--HHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~ 35 (511)
|.+.++|+|||+|..|+..|..| . |++|+++|++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 55557899999999999999999 5 79999999864
No 395
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.98 E-value=0.37 Score=46.76 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=29.5
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|.+.++|.|||.|.-|...|..| .|++|++++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 33457899999999999999999 899999999864
No 396
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.96 E-value=0.41 Score=47.00 Aligned_cols=32 Identities=19% Similarity=0.337 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..+|+|||+|..|+.++..+ .|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999 888999999864
No 397
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=87.94 E-value=0.43 Score=42.37 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
.++|.|||+|.-|.+.|..| .|.+|++++++..
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 36899999999999999999 8899999998754
No 398
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=87.86 E-value=0.23 Score=49.66 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=30.2
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..++|+|||+|.+|.-+|..|++.+.. |+++.+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~-----V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVD-----VTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCE-----EEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCe-----EEEEcCCC
Confidence 346899999999999999999998765 99999876
No 399
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=87.83 E-value=0.26 Score=48.96 Aligned_cols=51 Identities=14% Similarity=-0.070 Sum_probs=37.9
Q ss_pred CCchhhhhccCeEEEEeCc-eeEEeC--CcEEEcCCceeeccEEEEecCCCCcc
Q 010421 323 PEGFFSEAEKGKIVFKRAS-KWWFWK--GGLEFEDNTKLEADVVILCTGYDGKK 373 (511)
Q Consensus 323 ~~~~~~~l~~g~v~v~~~~-i~~~~~--~~v~~~dG~~~~~D~VI~aTG~~~~~ 373 (511)
.+.+.+.+++.+++++.+. |.++.. ++++..+|+++++|.||+|+|.....
T Consensus 192 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~~ 245 (421)
T 3nrn_A 192 IDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRETV 245 (421)
T ss_dssp HHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHHH
Confidence 3455566677678888875 888864 34656788889999999999987543
No 400
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.63 E-value=0.46 Score=45.54 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=28.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
.++|+|||||..|...|..| .|+ +|+++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 35899999999999999888 777 899999864
No 401
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.47 E-value=0.52 Score=39.36 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=29.7
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.++|+|+|+|..|..++..|.+.+.. |+++.|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~-----V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQN-----VTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCC-----EEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCC-----EEEEECCC
Confidence 46899999999999999999987754 99998864
No 402
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=87.47 E-value=0.43 Score=45.32 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|++++++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 46899999999999999999 899999999864
No 403
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=87.40 E-value=0.45 Score=44.44 Aligned_cols=30 Identities=23% Similarity=0.337 Sum_probs=27.7
Q ss_pred eEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+|+|||+|.-|...|..| .|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 699999999999999999 889999999864
No 404
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.26 E-value=0.42 Score=45.23 Aligned_cols=30 Identities=30% Similarity=0.304 Sum_probs=27.8
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
++|+|||+|.-|...|..| .|++|++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 5899999999999999999 78999999985
No 405
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=87.24 E-value=0.37 Score=47.39 Aligned_cols=32 Identities=28% Similarity=0.276 Sum_probs=29.2
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 6 DVvIIGaG~~Gl~~A~~La~~G~~-----V~vlE~~~ 37 (397)
T 2oln_A 6 DVVVVGGGPVGLATAWQVAERGHR-----VLVLERHT 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCC-----EEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-----EEEEeCCC
Confidence 699999999999999999998765 99999975
No 406
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=87.19 E-value=0.44 Score=45.40 Aligned_cols=31 Identities=29% Similarity=0.341 Sum_probs=27.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~ 34 (511)
.++|+|||+|..|...|..| .|+ +|+++|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 35899999999999999999 777 89999985
No 407
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=87.18 E-value=0.31 Score=49.68 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=30.6
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..++|+|||+|.+|+.+|..|++.+.+ |+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~-----v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQ-----VTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCE-----EEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCe-----EEEEECCC
Confidence 357899999999999999999998754 99998864
No 408
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=87.17 E-value=0.31 Score=47.79 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=29.7
Q ss_pred CcEEEECCCCCHHHHHHHHHHh--cCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAES--NQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~--~~~~~~~~Vtl~~R~~~ 236 (511)
++|+|||+|.+|+-+|..|++. +. +|+++.|.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~-----~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW-----AIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-----EEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC-----CEEEEECCCC
Confidence 3699999999999999999998 65 4999998764
No 409
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=87.03 E-value=0.51 Score=45.78 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=28.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|+|||+|.-|.+.|..| .|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 35899999999999999999 889999999963
No 410
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=87.02 E-value=0.34 Score=47.26 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=29.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~-----V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKN-----TALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCc-----EEEEeCCC
Confidence 4799999999999999999998765 99999864
No 411
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=87.01 E-value=0.5 Score=44.93 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=28.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 36899999999999999999 889999999853
No 412
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=86.98 E-value=0.29 Score=48.58 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=29.1
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
++|+|||+|.+|+-+|..|++.+.+ |+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~-----V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHE-----VEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCE-----EEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCc-----eEEEeCCC
Confidence 3799999999999999999998754 99999874
No 413
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=86.88 E-value=0.41 Score=47.55 Aligned_cols=35 Identities=20% Similarity=0.381 Sum_probs=30.2
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESN-QGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~-~~~~~~~Vtl~~R~~ 235 (511)
+.++|+|||+|.+|.-.|..|++.+ .+ |+++.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~-----v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHD-----YTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCC-----EEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCc-----EEEEECCC
Confidence 3468999999999999999999887 54 99998865
No 414
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=86.79 E-value=0.36 Score=46.65 Aligned_cols=33 Identities=12% Similarity=0.155 Sum_probs=29.6
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~-----V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHE-----VLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-----EEEEeCCC
Confidence 3699999999999999999998765 99999975
No 415
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=86.47 E-value=0.46 Score=42.46 Aligned_cols=35 Identities=29% Similarity=0.390 Sum_probs=29.4
Q ss_pred CCCCCeEEEECC-CHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGA-GVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGa-G~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|++.++|+|+|| |.-|...+..| .|.+|+++.|+.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 665679999995 99999999999 889999999964
No 416
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=86.36 E-value=0.49 Score=45.09 Aligned_cols=32 Identities=38% Similarity=0.534 Sum_probs=27.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~~ 35 (511)
..+|+|||+|..|..+|..| .++ +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 46899999999999999999 665 799999853
No 417
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=86.27 E-value=0.39 Score=46.92 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=29.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+..
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~-----V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVK-----TLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe-----EEEEeCCC
Confidence 3699999999999999999998754 99999865
No 418
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=86.27 E-value=0.3 Score=47.41 Aligned_cols=32 Identities=6% Similarity=0.036 Sum_probs=28.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~-----V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLN-----VLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCC-----EEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCe-----EEEEecCC
Confidence 699999999999999999998765 99999874
No 419
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=86.19 E-value=0.57 Score=47.46 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=29.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
..++|.|||+|.-|...|..| .|++|+++|++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 356899999999999999999 899999999864
No 420
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=86.13 E-value=0.65 Score=43.21 Aligned_cols=34 Identities=35% Similarity=0.479 Sum_probs=29.3
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|+ .++|+|+|+|.-|...+..| .|++|+++.|+.
T Consensus 1 M~-~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MS-LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -C-CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CC-CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 54 36899999999999999999 899999999863
No 421
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.05 E-value=0.53 Score=47.68 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|+|||+|.-|+..|..| .|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 46899999999999999999 799999999864
No 422
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=86.04 E-value=0.4 Score=46.23 Aligned_cols=37 Identities=14% Similarity=0.063 Sum_probs=28.9
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCC-CCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQG-PEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~-~~~~~Vtl~~R~~ 235 (511)
+|+|||+|.+|+=+|..|++.+.. ....+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 699999999999999999998700 0002599999874
No 423
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=86.04 E-value=0.3 Score=49.39 Aligned_cols=35 Identities=11% Similarity=0.133 Sum_probs=29.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
++|+|||||.+|+=+|..|++.+.. .+|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~---~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCP---PKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSC---CEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCC---CcEEEEeCCC
Confidence 5899999999999999999988651 1499998864
No 424
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=86.04 E-value=0.56 Score=44.48 Aligned_cols=30 Identities=37% Similarity=0.447 Sum_probs=27.8
Q ss_pred CeEEEECCCHHHHHHHHhc-cCCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL-RHHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l-~g~~v~v~e~~ 34 (511)
++|+|||+|.-|...|..| .|.+|++++|+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLSLYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHhcCCceEEEECC
Confidence 5899999999999999999 88999999985
No 425
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=85.84 E-value=0.54 Score=38.55 Aligned_cols=35 Identities=11% Similarity=0.246 Sum_probs=29.9
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..++|+|+|+|..|..+|..|.+.+.. |+++.+++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~-----V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKK-----VLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCe-----EEEEECCH
Confidence 357899999999999999999988765 99998865
No 426
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=85.83 E-value=0.49 Score=48.20 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=35.2
Q ss_pred CchhhhhccCeEEEEeCc-eeEEeCC--cEEEcCCceeeccEEEEecCC
Q 010421 324 EGFFSEAEKGKIVFKRAS-KWWFWKG--GLEFEDNTKLEADVVILCTGY 369 (511)
Q Consensus 324 ~~~~~~l~~g~v~v~~~~-i~~~~~~--~v~~~dG~~~~~D~VI~aTG~ 369 (511)
+.+.+.+.+.+++++.+. |.++..+ .|++.||+++.+|.||+++-.
T Consensus 226 ~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 226 IAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCCH
Confidence 334455677788888775 8888644 488999999999999998754
No 427
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.82 E-value=0.53 Score=44.83 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=28.8
Q ss_pred CCCCCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCC
Q 010421 1 MANYSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEAS 34 (511)
Q Consensus 1 m~~~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~ 34 (511)
|++..+|+|||||..|.+.|..| .++ +++++|..
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 56667999999999999999999 454 68999884
No 428
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=85.77 E-value=0.62 Score=44.17 Aligned_cols=31 Identities=32% Similarity=0.543 Sum_probs=27.1
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
++|+|||||..|...|..| .++ +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 5899999999999999998 665 899999853
No 429
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.73 E-value=0.61 Score=45.37 Aligned_cols=31 Identities=29% Similarity=0.445 Sum_probs=28.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
..+|+|||+|..|..++..+ .|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 36899999999999999999 88899999985
No 430
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=85.67 E-value=0.63 Score=44.22 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=28.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
.++|+|||+|..|..+|..| .++ +++++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 46899999999999999998 788 89999985
No 431
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.62 E-value=0.72 Score=43.65 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=28.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||.|.-|...|..| .|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46899999999999999999 899999999863
No 432
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=85.60 E-value=0.42 Score=46.69 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=30.8
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEec
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRT 234 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~ 234 (511)
....+|+|||+|.+|+-+|..|++.+.+ |+++.++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~-----V~VlE~~ 76 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHD-----VTILEAN 76 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCE-----EEEECSC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCc-----EEEEecc
Confidence 3467999999999999999999998754 9999987
No 433
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.58 E-value=0.61 Score=44.04 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=29.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|++++++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 46899999999999999999 899999999863
No 434
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=85.50 E-value=0.28 Score=49.33 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=29.6
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCC-CCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQG-PEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~-~~~~~Vtl~~R~~ 235 (511)
++|+|||+|.+|+-+|..|++.+.. ....+|+++.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 5799999999999999999998710 0012499998864
No 435
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=85.43 E-value=0.66 Score=45.04 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=29.1
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
++|+|||||..|..++..+ .|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999998 9999999998654
No 436
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.39 E-value=0.71 Score=44.06 Aligned_cols=32 Identities=28% Similarity=0.507 Sum_probs=28.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
..+|+|||||..|.+.|..| .++ +++++|...
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 46899999999999999988 677 899999864
No 437
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.26 E-value=0.48 Score=45.13 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=28.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC-CCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH-HNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g-~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 46899999999999999999 88 8999999863
No 438
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=85.26 E-value=0.45 Score=47.31 Aligned_cols=32 Identities=16% Similarity=0.193 Sum_probs=28.7
Q ss_pred cEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 199 KVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 199 ~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
+|+|||+|.+|+-+|..|++.+.+ |+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~-----V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKK-----VLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCe-----EEEEecCC
Confidence 699999999999999999998765 99998854
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=85.24 E-value=0.42 Score=43.19 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=27.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
...|+|+|+|..|...|..| .|+ |+++|++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 46899999999999999999 778 99999863
No 440
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=85.23 E-value=0.68 Score=42.23 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=29.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 46899999999999999999 899999999864
No 441
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=85.19 E-value=0.53 Score=45.60 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=29.1
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+=+|..|++.+. +|+++.+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~-----~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGY-----SVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCC-----EEEEEeccC
Confidence 479999999999999999998865 499999864
No 442
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=85.17 E-value=0.67 Score=44.34 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=28.1
Q ss_pred CCCeEEEECCCHHHHH-HHHhc--cCCCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLA-AVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~-aa~~l--~g~~v~v~e~~~ 35 (511)
..++|.|||.|.+|++ +|..| .|++|++.|++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3578999999999997 66666 999999999863
No 443
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.10 E-value=0.34 Score=43.46 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=28.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEE-EcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVV-FEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v-~e~~~ 35 (511)
.++|.|||+|.-|...|..| .|++|++ ++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 36899999999999999999 8899988 88753
No 444
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.10 E-value=0.35 Score=38.02 Aligned_cols=36 Identities=19% Similarity=0.080 Sum_probs=29.6
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+++|+|+|+|..|..++..|...+. .+|+++.|++
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~----~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSN----YSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSS----EEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCC----ceEEEEeCCH
Confidence 45789999999999999999998762 2488888864
No 445
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.99 E-value=0.6 Score=43.71 Aligned_cols=31 Identities=29% Similarity=0.454 Sum_probs=28.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|.|||+|.-|...|..| .|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 5799999999999999999 889999999864
No 446
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=84.96 E-value=0.66 Score=44.53 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=28.6
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
+..+|.|||+|.-|...|..| .|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 357899999999999999999 88999999985
No 447
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=84.92 E-value=0.48 Score=48.06 Aligned_cols=35 Identities=20% Similarity=0.147 Sum_probs=30.2
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
+.++|+|||+|.+|+-+|..|++.+.+ |+++.+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~-----v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYK-----VTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCE-----EEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCC-----EEEEeccC
Confidence 457899999999999999999987654 99998764
No 448
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=84.81 E-value=0.54 Score=38.36 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=29.3
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.++++|+|+|+|..|..++..|.+.+.. |+++.|++
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l~~~g~~-----v~~~d~~~ 39 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKELHRMGHE-----VLAVDINE 39 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTCC-----CEEEESCH
T ss_pred CcCCcEEEECCCHHHHHHHHHHHHCCCE-----EEEEeCCH
Confidence 3567899999999999999999987654 88888754
No 449
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=84.77 E-value=0.67 Score=39.94 Aligned_cols=36 Identities=11% Similarity=0.037 Sum_probs=31.2
Q ss_pred cCCCcEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEEecC
Q 010421 195 LKDKKVAVVGFKKSAIDLAKECAES-NQGPEGQPCTMIVRTT 235 (511)
Q Consensus 195 ~~~k~V~VvG~G~sg~d~a~~l~~~-~~~~~~~~Vtl~~R~~ 235 (511)
..+++|+|+|.|..|..+|..|.+. +.. |+++.|++
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~-----V~vid~~~ 73 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKI-----SLGIEIRE 73 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSC-----EEEEESCH
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCe-----EEEEECCH
Confidence 4567999999999999999999988 765 99998865
No 450
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=84.73 E-value=0.71 Score=45.87 Aligned_cols=33 Identities=27% Similarity=0.498 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHhc-cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL-RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l-~g~~v~v~e~~~~ 36 (511)
.++|+|||+|.-|+..|..| .|++|+++|++..
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQNHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHcCCeEEEEecCHH
Confidence 35899999999999999999 9999999998654
No 451
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=84.59 E-value=0.71 Score=37.87 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=30.4
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..++|+|+|.|..|..+|..|.+.+.. |+++.+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~-----v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIP-----LVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCC-----EEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC-----EEEEECCH
Confidence 346899999999999999999987765 99999875
No 452
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.44 E-value=0.75 Score=44.99 Aligned_cols=31 Identities=23% Similarity=0.398 Sum_probs=28.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|..+|..+ .|.+|+++|++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46899999999999999999 88899999985
No 453
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=84.39 E-value=0.53 Score=38.23 Aligned_cols=34 Identities=18% Similarity=0.243 Sum_probs=28.4
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
+.+|+|+|+|..|..+|..|.+.+. +|+++.|++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-----~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-----DIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-----EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----eEEEEECCH
Confidence 4689999999999999999998765 489888754
No 454
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=84.38 E-value=0.68 Score=42.39 Aligned_cols=30 Identities=30% Similarity=0.394 Sum_probs=27.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
.+|+|||+|-.|..+|+.| .|+ +++|+|+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 5899999999999999999 887 79999985
No 455
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=84.35 E-value=0.78 Score=43.79 Aligned_cols=31 Identities=32% Similarity=0.453 Sum_probs=27.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~ 34 (511)
..+|+|||+|..|.++|..| .++ +++++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 46899999999999999998 665 79999985
No 456
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=84.35 E-value=0.8 Score=40.78 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=27.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
++|+|||+|..|...|..| .|++|++++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999999999999999 88899999985
No 457
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=84.34 E-value=0.46 Score=46.15 Aligned_cols=34 Identities=9% Similarity=0.079 Sum_probs=29.1
Q ss_pred CCCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 196 KDKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 196 ~~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..++|+|||+|.+|+-+|..|+ .+. +|+++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~-----~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHG-----RVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTS-----CEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCC-----CEEEEECCC
Confidence 3478999999999999999999 454 499999874
No 458
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=84.29 E-value=0.73 Score=43.95 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=27.8
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cC----CCcEEEcCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RH----HNPVVFEASD 35 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g----~~v~v~e~~~ 35 (511)
+.++|.|||+|.-|...|..| .| .+|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 345899999999999999999 77 7899998853
No 459
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=84.21 E-value=0.82 Score=46.09 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=28.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
.++|+|||+|.-|...|..| .|++|+++|++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35799999999999999999 899999999863
No 460
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=84.12 E-value=0.75 Score=43.52 Aligned_cols=29 Identities=28% Similarity=0.502 Sum_probs=26.5
Q ss_pred eEEEECCCHHHHHHHHhc--cCC--CcEEEcCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHH--NPVVFEAS 34 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~ 34 (511)
+|+|||||..|...|..| .|+ +|+++|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 799999999999999998 777 89999985
No 461
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.10 E-value=0.89 Score=39.64 Aligned_cols=34 Identities=38% Similarity=0.474 Sum_probs=29.6
Q ss_pred CCCCCeEEEECC-CHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 1 MANYSKIAIIGA-GVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 1 m~~~~~v~IIGa-G~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
|+. ++|+|+|| |.-|..+++.| .|.+|+++.|+.
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 543 68999998 99999999999 889999999863
No 462
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.09 E-value=0.92 Score=43.22 Aligned_cols=32 Identities=25% Similarity=0.434 Sum_probs=27.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~~ 35 (511)
..+|+|||+|..|.+.|..| .++ +++++|...
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 46899999999999999988 666 899999864
No 463
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.06 E-value=0.74 Score=42.73 Aligned_cols=31 Identities=10% Similarity=0.110 Sum_probs=28.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|+|||.-|...+..| .|++|+++.|+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 46899999999999999999 89999999885
No 464
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.01 E-value=0.8 Score=44.64 Aligned_cols=31 Identities=19% Similarity=0.348 Sum_probs=28.3
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|..+|..+ .|.+|+++|++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 36899999999999999999 88999999985
No 465
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.95 E-value=0.78 Score=45.68 Aligned_cols=33 Identities=18% Similarity=0.396 Sum_probs=29.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
..+|+|||.|..||.+|..| .|++|+.+|-+..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 36899999999999999999 8999999997653
No 466
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.94 E-value=0.85 Score=45.67 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=28.8
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|+|||+|.-|...|..| .|++|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 6899999999999999999 999999999964
No 467
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.91 E-value=0.57 Score=44.39 Aligned_cols=29 Identities=28% Similarity=0.163 Sum_probs=26.6
Q ss_pred CeEEEECCCHHHHHHHHhc--c-----C-CCcEEEcC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--R-----H-HNPVVFEA 33 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~-----g-~~v~v~e~ 33 (511)
++|+|||+|.-|...|..| . | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4899999999999999999 6 8 89999987
No 468
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.90 E-value=0.53 Score=45.81 Aligned_cols=30 Identities=23% Similarity=0.416 Sum_probs=27.5
Q ss_pred eEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+|+|||+|.-|...|..| .|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 899999999999999999 788999999864
No 469
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=83.83 E-value=0.8 Score=45.38 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=29.1
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
...|+|||.|..|..+|..| .|++|+++|++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35799999999999999999 899999999964
No 470
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.82 E-value=0.79 Score=43.68 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=28.5
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|.|||+|.-|...|..| .|++|++++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5899999999999999999 899999999863
No 471
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=83.81 E-value=0.59 Score=44.06 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=26.9
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDS 36 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~ 36 (511)
|.++|.+||-|.-|...|.+| .|++|++++++..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999 9999999998654
No 472
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=83.75 E-value=0.98 Score=46.21 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCCCceEeeeEEEEEEEcCCCCcccCCCCCCCCCCCceEEEEEeCCCCceeEEEeCEEEEeeccc
Q 010421 81 DYLESYAKHFDVFKCVRFNSKVVEVRFTGSLETTDSGGNLLPAGHPVWEVAVQTHNSNSIQRYGFEFLVVCTGKY 155 (511)
Q Consensus 81 ~yl~~~~~~~~~~~~i~~~~~V~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~vVlAtG~~ 155 (511)
...+..++..+. .++++++|++|+.. ++.|+|.+.+++ ++.||+||+|++..
T Consensus 216 ~l~~~l~~~lg~--~i~~~~~V~~i~~~----------------~~~v~v~~~~g~-----~~~ad~VI~a~p~~ 267 (520)
T 1s3e_A 216 QVSERIMDLLGD--RVKLERPVIYIDQT----------------RENVLVETLNHE-----MYEAKYVISAIPPT 267 (520)
T ss_dssp HHHHHHHHHHGG--GEESSCCEEEEECS----------------SSSEEEEETTSC-----EEEESEEEECSCGG
T ss_pred HHHHHHHHHcCC--cEEcCCeeEEEEEC----------------CCeEEEEECCCe-----EEEeCEEEECCCHH
Confidence 444555565665 79999999999873 456777665554 78999999999975
No 473
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.61 E-value=0.87 Score=45.55 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCCCCc
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEASDSI 37 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~~~ 37 (511)
..+++|||.|.-|+..|..| .|++|+++|++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 46899999999999999999 89999999997653
No 474
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=83.56 E-value=0.62 Score=45.99 Aligned_cols=33 Identities=9% Similarity=0.052 Sum_probs=29.2
Q ss_pred CcEEEECCCCCHHHHHHHHHHh--cCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAES--NQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~--~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++. +.+ |+++.+..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~-----V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRS-----LLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSC-----EEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCe-----EEEEeCCC
Confidence 4799999999999999999998 754 99999864
No 475
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=83.34 E-value=0.68 Score=46.52 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=29.5
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~-----V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKK-----VLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCe-----EEEEeCCC
Confidence 5799999999999999999998765 99999875
No 476
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=83.13 E-value=1 Score=41.58 Aligned_cols=31 Identities=32% Similarity=0.374 Sum_probs=28.0
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++++|||+|-+|-+++..| .|.+|+|+.|.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999999999999 78889999885
No 477
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=83.07 E-value=0.61 Score=47.73 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=29.4
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESN-QGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~-~~~~~~~Vtl~~R~~ 235 (511)
.++|+|||+|.+|+-.|..|++.+ .+ |+++.+++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~-----V~VlEa~~ 42 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQD-----CLVLEARD 42 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCS-----EEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCC-----EEEEeCCC
Confidence 358999999999999999999987 54 99998764
No 478
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=82.87 E-value=0.72 Score=45.42 Aligned_cols=34 Identities=24% Similarity=0.175 Sum_probs=29.3
Q ss_pred CCcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
..+|+|||+|.+|+-+|..|++.+.+ |+++.+++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~-----v~v~E~~~ 62 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQR-----VLIVDRRP 62 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCc-----eEEEeccC
Confidence 35799999999999999999988654 99998864
No 479
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=82.76 E-value=0.79 Score=46.13 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=28.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|...+..| .|.+|+|++++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 47899999999999999999 89999999985
No 480
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=82.73 E-value=0.85 Score=44.94 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=29.3
Q ss_pred CCcEEEECCCCCHHHHHHHHHHh-cCCCCCCcEEEEEecC
Q 010421 197 DKKVAVVGFKKSAIDLAKECAES-NQGPEGQPCTMIVRTT 235 (511)
Q Consensus 197 ~k~V~VvG~G~sg~d~a~~l~~~-~~~~~~~~Vtl~~R~~ 235 (511)
..+|+|||+|.+|+-+|..|++. +.+ |+++.+++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~-----v~v~E~~~ 41 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKR-----VLVLERRP 41 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCC-----EEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCC-----EEEEeCCC
Confidence 35799999999999999999998 654 99998764
No 481
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=82.58 E-value=0.71 Score=43.17 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=28.3
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|.|||+|.-|...|..| .|++|++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 4799999999999999999 899999999864
No 482
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=82.53 E-value=0.66 Score=45.52 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=28.8
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|.-+|..|++.+. +|+++.+++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~-----~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGH-----QVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-----EEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-----cEEEEEecC
Confidence 479999999999999999998764 499999864
No 483
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=82.52 E-value=0.84 Score=43.33 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=27.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
.++|.|||+|.-|...|..| .|+ +|++++++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 36899999999999999999 888 99999985
No 484
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=82.49 E-value=0.71 Score=46.18 Aligned_cols=31 Identities=13% Similarity=-0.040 Sum_probs=28.4
Q ss_pred CcEEEECCCCCHHHHHHHHHHhc-CCCCCCcEEEEEe
Q 010421 198 KKVAVVGFKKSAIDLAKECAESN-QGPEGQPCTMIVR 233 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~-~~~~~~~Vtl~~R 233 (511)
.+|+|||+|.+|+-+|..|++.+ .+ |+++.+
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~-----V~vlE~ 55 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGS-----VLVVDA 55 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSC-----EEEEES
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCc-----EEEEcc
Confidence 47999999999999999999988 54 999998
No 485
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=82.49 E-value=0.79 Score=45.83 Aligned_cols=30 Identities=30% Similarity=0.480 Sum_probs=27.7
Q ss_pred eEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
+|+|||+|..|+..|..| .|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 699999999999999999 889999999864
No 486
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=82.45 E-value=0.71 Score=47.08 Aligned_cols=33 Identities=18% Similarity=0.224 Sum_probs=29.3
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCcEEEEEecC
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQPCTMIVRTT 235 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~Vtl~~R~~ 235 (511)
.+|+|||+|.+|+-+|..|++.+.+ |+++.+.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~-----V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLS-----VLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCC-----EEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC-----EEEEECCC
Confidence 3699999999999999999998765 99999864
No 487
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=82.36 E-value=0.82 Score=45.12 Aligned_cols=34 Identities=9% Similarity=0.143 Sum_probs=29.9
Q ss_pred CcEEEECCCCCHHHHHHHHHHhcCCCCCCc-EEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAESNQGPEGQP-CTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~~~~~~~~~-Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++.+ .+ |+++.|.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G-----~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAG-----IGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-----CSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCC-----CCeEEEEECCCC
Confidence 47999999999999999999875 36 999999864
No 488
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=82.34 E-value=0.87 Score=42.90 Aligned_cols=31 Identities=29% Similarity=0.341 Sum_probs=28.4
Q ss_pred CeEEEECCCHHHHHHHHhc--cCCCcEEEcCCC
Q 010421 5 SKIAIIGAGVSGLAAVKQL--RHHNPVVFEASD 35 (511)
Q Consensus 5 ~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~~ 35 (511)
++|.|||+|.-|...|..| .|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5899999999999999999 889999999863
No 489
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=82.33 E-value=1 Score=42.89 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=26.5
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC--CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH--NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~--~v~v~e~~ 34 (511)
..+|+|||||..|..+|..| .++ +++++|.+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 46899999999999999998 554 68999874
No 490
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=82.27 E-value=1.1 Score=42.34 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=28.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|..+|+.| .|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECC
Confidence 46899999999999999999 88899999985
No 491
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=82.22 E-value=1 Score=42.64 Aligned_cols=30 Identities=30% Similarity=0.545 Sum_probs=26.7
Q ss_pred eEEEECCCHHHHHHHHhc--c--CCCcEEEcCCC
Q 010421 6 KIAIIGAGVSGLAAVKQL--R--HHNPVVFEASD 35 (511)
Q Consensus 6 ~v~IIGaG~aGl~aa~~l--~--g~~v~v~e~~~ 35 (511)
+|+|||+|..|...|..| . +.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999 3 67899999964
No 492
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=82.20 E-value=1.1 Score=41.65 Aligned_cols=32 Identities=28% Similarity=0.177 Sum_probs=28.2
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC---CcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH---NPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~---~v~v~e~~~ 35 (511)
.++|.|||+|--|.+.|..| .|+ +|++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 46899999999999999999 777 899999863
No 493
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=82.18 E-value=0.78 Score=43.85 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=28.8
Q ss_pred CCCCCeEEEECC-CHHHHHHHHhc--cCC-------CcEEEcCC
Q 010421 1 MANYSKIAIIGA-GVSGLAAVKQL--RHH-------NPVVFEAS 34 (511)
Q Consensus 1 m~~~~~v~IIGa-G~aGl~aa~~l--~g~-------~v~v~e~~ 34 (511)
|.+.++|+|+|| |..|...+..| .|+ +|+++|+.
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~ 44 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIP 44 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCC
Confidence 767779999997 99999999999 564 78888874
No 494
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=82.15 E-value=1 Score=41.30 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=27.7
Q ss_pred CCeEEEECCCHHHHHHHHhc--cC----CCcEEEcCCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RH----HNPVVFEASD 35 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g----~~v~v~e~~~ 35 (511)
.++|.|||+|.-|...|..| .| .+|++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 45899999999999999999 67 6899998863
No 495
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=82.01 E-value=1.1 Score=42.08 Aligned_cols=31 Identities=16% Similarity=0.280 Sum_probs=28.4
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++|+|||+|..|..+|+.| .|.+|+++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~ 187 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARE 187 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECC
Confidence 46899999999999999999 88899999985
No 496
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=81.99 E-value=1 Score=42.89 Aligned_cols=31 Identities=32% Similarity=0.385 Sum_probs=0.0
Q ss_pred CCCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 3 NYSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 3 ~~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
+.++|+|||+|.-|.+.|..| .|.+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
No 497
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=81.94 E-value=0.97 Score=43.42 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=29.6
Q ss_pred CcEEEECCCCCHHHHHHHHHHh--cCCCCCCcEEEEEecCc
Q 010421 198 KKVAVVGFKKSAIDLAKECAES--NQGPEGQPCTMIVRTTH 236 (511)
Q Consensus 198 k~V~VvG~G~sg~d~a~~l~~~--~~~~~~~~Vtl~~R~~~ 236 (511)
.+|+|||+|.+|+-+|..|++. +. +|+++.+.+.
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~-----~V~LiEk~~~ 115 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDL-----RITIVEAGVA 115 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTS-----CEEEEESSSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCC-----EEEEEeCCCc
Confidence 4799999999999999999997 54 4999998753
No 498
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=81.93 E-value=1.1 Score=42.12 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=27.8
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCC-CcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHH-NPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~-~v~v~e~~ 34 (511)
.++|+|||+|-.|..+|..| .|. +|+|++|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 46899999999999999999 787 89999885
No 499
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=81.91 E-value=0.75 Score=47.36 Aligned_cols=48 Identities=21% Similarity=0.087 Sum_probs=35.1
Q ss_pred chhhhhccCeEEEEeCceeEEeC--C----cEEEcCCceeeccEEEEecCCCCc
Q 010421 325 GFFSEAEKGKIVFKRASKWWFWK--G----GLEFEDNTKLEADVVILCTGYDGK 372 (511)
Q Consensus 325 ~~~~~l~~g~v~v~~~~i~~~~~--~----~v~~~dG~~~~~D~VI~aTG~~~~ 372 (511)
.+.+.+.+.+++++.+.|.++.. + +|++++|+++.+|.||.|+|....
T Consensus 170 ~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 170 FLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 34445555678887777777753 3 366788888999999999999653
No 500
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.89 E-value=1.1 Score=41.42 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=27.9
Q ss_pred CCeEEEECCCHHHHHHHHhc--cCCCcEEEcCC
Q 010421 4 YSKIAIIGAGVSGLAAVKQL--RHHNPVVFEAS 34 (511)
Q Consensus 4 ~~~v~IIGaG~aGl~aa~~l--~g~~v~v~e~~ 34 (511)
.++++|+|+|-.|.++|..| .|.+|++++|+
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 46899999999999999999 88899999885
Done!