BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010422
(511 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/506 (50%), Positives = 343/506 (67%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 616
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAA++VAKRV+EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 617 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 676
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 677 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQD-------------------------- 710
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
+KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D
Sbjct: 711 ---------------MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETD 755
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YLDA+LIT+ Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+
Sbjct: 756 YLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSA 815
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q R+F PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+
Sbjct: 816 LPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLV 875
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
V PIS+AQA QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+
Sbjct: 876 VTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM 935
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++D++ FDFM+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI
Sbjct: 936 GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLI 994
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
++ C EEML V+MLSV+++F+R
Sbjct: 995 MSVHLGCSEEMLTIVSMLSVQNVFYR 1020
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 253/506 (50%), Positives = 343/506 (67%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
IL+QR+SLPI ++++LV+ V N ILI++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGK-IGCT 640
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAA++VAKRV+EE G LGQ VGY+IRF+D TS T IK E L+DP L
Sbjct: 641 QPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDL 700
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
++Y+ I++DEAHERT+HTDVL GLLKK R
Sbjct: 701 TQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQD-------------------------- 734
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
+KLI+ SA+LDA FS+YF A + GR +PVEILYT PE D
Sbjct: 735 ---------------MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETD 779
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YLDA+LIT+ Q+HL E PGDILVFLTGQEEI++ ++ ER+ L +L+ +P++S+
Sbjct: 780 YLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSA 839
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q R+F PA G RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+ G++ L+
Sbjct: 840 LPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLV 899
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
V PIS+AQA QR+GRAGR GPGKC+RLY E + D++ + PEI+R NL++ +L LKA+
Sbjct: 900 VTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAM 959
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++D++ FDFM+ P ++I ++EQL+ LGAL D+ L+ +G +MA PL+P+ K LI
Sbjct: 960 GINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTR-LGRRMAEFPLEPMLCKMLI 1018
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
++ C EEML V+MLSV+++F+R
Sbjct: 1019 MSVHLGCSEEMLTIVSMLSVQNVFYR 1044
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 255/504 (50%), Positives = 337/504 (66%), Gaps = 52/504 (10%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
+QR+ LP+ + K+ +E V KN IL+++GETGSGKTTQ+ Q+L G+ D K+IG TQP
Sbjct: 505 EQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQP 564
Query: 68 RRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 118
RRVAA++VAKRVAEE G +G+ VGY+IRF+D+TS T+IK E L+DP LS+
Sbjct: 565 RRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSK 624
Query: 119 YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGI 178
YS II+DEAHERTV TDVL GLLK +L R +
Sbjct: 625 YSVIILDEAHERTVATDVLFGLLKGT-----------------------VLKRPD----- 656
Query: 179 NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 238
LKLI+ SA+LDA FS YF + GR +PVEI+YT PE DYL
Sbjct: 657 -------------LKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYTKQPEADYL 703
Query: 239 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 298
DA L+T+ Q+HL E PGDILVFLTGQEEI++ ++ ER L ++ +LV +P++S+LP
Sbjct: 704 DAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALP 763
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
SE Q R+F PA G RKV++ATNIAETS+TI GI YV+DPGFVK +DP GM+SL+V
Sbjct: 764 SEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVT 823
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGV 417
PIS+AQA QRSGRAGR GPGKC+RLY E+ + +++ S PEI+R NLS+ IL LKA+G+
Sbjct: 824 PISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKAMGI 883
Query: 418 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 477
+D++ FDFM+ P ++I +L+ L+ L AL DD L P+G +MA P++P SK LI +
Sbjct: 884 NDLLNFDFMDPPPAQTMIAALQNLYALSAL-DDEGLLTPLGRKMADFPMEPQLSKVLITS 942
Query: 478 GQFNCLEEMLITVAMLSVESIFFR 501
+ C EEML +AMLSV +I+ R
Sbjct: 943 VELGCSEEMLSIIAMLSVPNIWSR 966
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/506 (50%), Positives = 336/506 (66%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
+++QR+SLPI +++K L+E + N IL++VGETGSGKTTQ+ Q+ AG R GK IG T
Sbjct: 533 MVEQRESLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGK-IGCT 591
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAA++VAKRVAEE G +LG VGY+IRF+D TS T IK E L+DP L
Sbjct: 592 QPRRVAAMSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDL 651
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
S YS I++DEAHERT+HTDVL GLLK
Sbjct: 652 SGYSLIMLDEAHERTIHTDVLFGLLK---------------------------------- 677
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
RK LKLII SA+LD+ FSEYF A + GR FPVEILYT PE D
Sbjct: 678 -------AAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESD 730
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YL+A IT+ Q+HL E PGD+LVFLTGQEEI++ ++ ER+ + +L+ +P++ +
Sbjct: 731 YLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGA 790
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q R+F PA AG RKV++ATNIAETS+TI GI YV+DPGFVK ++Y+P GM+SL+
Sbjct: 791 LPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLV 850
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
V PIS+A A QRSGRAGR GPGKC+RLY E F D++ + PEI+R NL++ +LQLKA+
Sbjct: 851 VTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAM 910
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++++I FDFM+ P S+I +L L L AL D L+ +G +MA PL+P SK LI
Sbjct: 911 GINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTK-LGRRMAEFPLEPSLSKLLI 969
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
++ C EE+L VAML+V++IF+R
Sbjct: 970 MSVDLGCSEEVLTIVAMLNVQNIFYR 995
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/507 (47%), Positives = 336/507 (66%), Gaps = 52/507 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R+ IL+QRK+LPI L ++++ N ++++VGETGSGK+TQ+PQFL + ++G +
Sbjct: 86 RKDILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEG-CV 144
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
+TQPRRVAAV +AKRVA E G LG++VGYSIRFDD TS TRIK E + D
Sbjct: 145 AITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELIND 204
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
P LS+Y +I+DEAHERT+ TD+LLG +KK+ R
Sbjct: 205 PILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR------------------------- 239
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
L++IIMSA+L+A FSE+F A+ ++ GRQ+PV+I YT P
Sbjct: 240 ----------------PALRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTP 283
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
EPDYLDA L TIFQ+H PGDILVFLTGQ+EIE++E L++ QLP ++ P+
Sbjct: 284 EPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSNLPQIQACPL 343
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
F+SLP EQQ++VF PA A RKV+L+TNIAETSVTI GI+YVID G K + ++ G+E
Sbjct: 344 FASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLE 403
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 413
SL V PIS++ A+QRSGRAGRE G+C+R+Y E +FDKL T PEIKR +LS +L LK
Sbjct: 404 SLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVLTLK 463
Query: 414 ALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKA 473
A G +D+I F +M+ PS+ ++++LE L+ +GAL D+ ++D +G+QM+ +PL P ++A
Sbjct: 464 ARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHIND-LGYQMSLIPLLPSLARA 522
Query: 474 LIVAGQFNCLEEMLITVAMLSVESIFF 500
++ A + NCL E++ V+ LS +S+F
Sbjct: 523 VLAAREHNCLSEVIDVVSCLSTDSMFL 549
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/506 (48%), Positives = 339/506 (66%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR+SLPI + + ++ V ++ +L+++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 501 IKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGK-IGCT 559
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAA++V+KRVAEE G +LGQ VGY+IRF+D TS T IK E LLDP L
Sbjct: 560 QPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNL 619
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
S YS II+DEAHERT+ TDVL GLLK+ R +
Sbjct: 620 SAYSVIILDEAHERTISTDVLFGLLKQALQRRPE-------------------------- 653
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
LK++I SA+L+A FS+YF A+ + GR FPV+I YT PE D
Sbjct: 654 ---------------LKVLITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEAD 698
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YLDA+LIT+ Q+HL E PGDIL+FLTGQEEI++ +++ ER+ L L+ +P++S+
Sbjct: 699 YLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSA 758
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q ++F PA G RKV++ATNIAETS+TI GI YVIDPGF K + ++P GM+SL+
Sbjct: 759 LPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLV 818
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
V PIS+A A QRSGRAGR GPGKC+RLY E+ F +++ S+ PEI+R NL N +L +KA+
Sbjct: 819 VAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAM 878
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++D++ FDFM+ P +++ ++EQL+ LGAL ++ L+ +G +MA PLDP SK LI
Sbjct: 879 GINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTR-LGRKMAEFPLDPQLSKMLI 937
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
+ C +E+L VAMLSV+++F+R
Sbjct: 938 ASVDLGCSDEILTVVAMLSVQNVFYR 963
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 238/515 (46%), Positives = 337/515 (65%), Gaps = 51/515 (9%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
R+ + QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R G +I
Sbjct: 55 REALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-II 113
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
VTQPRRVAA+++A RV++E ELG+ VGY++RF+D TS TRIK EA+ D
Sbjct: 114 AVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISD 173
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
L +YS +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 174 SLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGK-------------------- 213
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
PLK+I+MSA++D FS+YF A ++++GRQ P++I YT P
Sbjct: 214 ----------------LPLKVIVMSATMDVDLFSQYFNRAPVLYLEGRQHPIQIFYTKQP 257
Query: 234 EPDYLDATLITIFQVHLDEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTV 291
+ DYL A L+++FQ+H EAP DILVFLTGQEEIE++ + ++ LP+ ++ +
Sbjct: 258 QQDYLHAALVSVFQIH-QEAPASQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVL 316
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P+++SLP QQ+RVF A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G
Sbjct: 317 PLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSG 376
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQ 411
+E L V +SK QA QR+GRAGRE G C+RLY E+EF+K E T PEI+RCNL++VILQ
Sbjct: 377 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQ 436
Query: 412 LKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGAL--TDDCKLSDPVGHQMARLPLDPI 469
L A+ V +++ FDFM KPS I ++ QL LLGAL DD P+G +MA PL+P
Sbjct: 437 LLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAAFPLEPR 496
Query: 470 YSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 504
++K ++++ +F+C EE+L V++LSV+S+ + P
Sbjct: 497 FAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPA 531
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/506 (48%), Positives = 332/506 (65%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I +QR+SLPI ++K L++ V N +L+++GETGSGKTTQ+ Q+L AG+ GK IG T
Sbjct: 508 IQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGK-IGCT 566
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAA++VAKRVAEE G LG+ VGY+IRF+D T T IK E L+D L
Sbjct: 567 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENL 626
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
S+YS I++DEAHERT+HTDVL GLLKK+ R LD
Sbjct: 627 SQYSVIMLDEAHERTIHTDVLFGLLKKLMKRR--------------------LD------ 660
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
L+LI+ SA+LDA FS YF + GR FPVEILYT PE D
Sbjct: 661 ---------------LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETD 705
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
YLDA LIT+ Q+HL E GDILVFLTGQEEI+S + + ER+ L + +L+ +P++S+
Sbjct: 706 YLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSA 765
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q R+F P G RKV++ATNIAE S+TI GI YV+DPGF K +Y+P +G+ESL+
Sbjct: 766 LPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLV 825
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
+ PIS+A A QR+GRAGR GPGKC+RLY E+ + +++ ++ PEI+R NL L +KA+
Sbjct: 826 ITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAM 885
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++D++ FDFM+ P ++I ++EQL+ LGAL ++ L+ +G +MA PL+P SK L+
Sbjct: 886 GINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLEPPLSKMLL 944
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
+ C +E+L +AM+ +IF+R
Sbjct: 945 ASVDLGCSDEILTMIAMIQTGNIFYR 970
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/508 (47%), Positives = 330/508 (64%), Gaps = 56/508 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I + RKSLP+ ++L++ VR+ +LIIVGETGSGKTTQ+PQ+L AGF + GK IG T
Sbjct: 460 IQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK-IGCT 518
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTST---------RIKEALLDPYL 116
QPRRVAA++VA RVAEE G +LG VGYSIRF+D TS T ++E L P L
Sbjct: 519 QPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDL 578
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
+ YS +I+DEAHERT+HTD+L GLLK +
Sbjct: 579 ASYSVLIIDEAHERTLHTDILFGLLKDIT------------------------------- 607
Query: 177 GINTLKQCQGRKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEP 235
+F P LKL+I SA++DA FS+YF A ++ GR++ V YT PE
Sbjct: 608 -----------RFRPDLKLLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEA 656
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFS 295
DYLDA ++T+ Q+H+ E GDILVFLTGQEE++ ++Q R L ++L+ I+S
Sbjct: 657 DYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYS 716
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
+LP++ Q ++F P RKV+LATNIAETS+TI GI YVIDPGF K ++++P GMESL
Sbjct: 717 TLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESL 776
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKA 414
++ P+S+A A QR GRAGR PGKCFRL+ FD +LE++T PEI+R NL NV+L LK+
Sbjct: 777 VITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKS 836
Query: 415 LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKAL 474
+G++D++ FDFM+ P ++I +LEQL+ LGAL D +L+ +G +MA P+DP SK +
Sbjct: 837 MGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQLT-KLGRKMAEFPVDPQLSKMI 895
Query: 475 IVAGQFNCLEEMLITVAMLSV-ESIFFR 501
I + ++ C EE+L AMLSV +IF+R
Sbjct: 896 IASEKYKCSEEILTICAMLSVGNTIFYR 923
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 457 bits (1176), Expect = e-128, Method: Compositional matrix adjust.
Identities = 242/516 (46%), Positives = 329/516 (63%), Gaps = 54/516 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
+ I + RKSLP+ + +E V+++ +LII GETGSGKTTQLPQ+L+ AGFC GK I
Sbjct: 354 KMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRI 413
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQPRRVAA++VA RVA+E G +LG +VGYSIRF+D TS T +K E L +
Sbjct: 414 GCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNE 473
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
P L+ YS +++DEAHERT+HTD+L GL+K + R
Sbjct: 474 PDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKD----------------------- 510
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LKL+I SA+LDA FS +F A + GR+FPV+I YT P
Sbjct: 511 ------------------LKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQAP 552
Query: 234 EPDYLDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 292
E DY+DA ++TI Q+HL + PGDILVFLTGQEEIE+V+ + ER L ++L+ +P
Sbjct: 553 EADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLP 612
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
++++LPS+ Q ++F P RKV+LATNIAETSVTI GI YVIDPGF K +D G+
Sbjct: 613 VYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGV 672
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQ 411
E L VV ISKA A QR+GRAGR GPGKCFRLY + +LE+ PEI+R NL NV+L
Sbjct: 673 EHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLM 732
Query: 412 LKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYS 471
LK+LG+ D++ FDF++ P + +++ +LEQL+ LGAL +L+ +G +MA P DP S
Sbjct: 733 LKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELT-KLGRRMAEFPCDPCMS 791
Query: 472 KALIVAGQFNCLEEMLITVAMLSVE-SIFFRSPGEV 506
K +I + ++ C EE++ AMLS ++F+R +V
Sbjct: 792 KMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/509 (46%), Positives = 333/509 (65%), Gaps = 51/509 (10%)
Query: 9 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPR 68
QR+SLPI +L+ ++R D +++GETGSGKTTQ+PQ+L+ G R G +I VTQPR
Sbjct: 70 QRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQG-IIAVTQPR 128
Query: 69 RVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 119
RVAA+++A RV++E ELG+ VGY++RFDD TS TRIK EA+ D L +Y
Sbjct: 129 RVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKY 188
Query: 120 SAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGIN 179
S +I+DEAHERT+HTDVL G++K Q R +
Sbjct: 189 SCVILDEAHERTIHTDVLFGVVKAAQKRRKELGK-------------------------- 222
Query: 180 TLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLD 239
PLK+I+MSA++D FS+YF A ++++GRQ P+++ YT P+ DYL
Sbjct: 223 ----------LPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDYLH 272
Query: 240 ATLITIFQVHLDEAPG--DILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 297
A L+++FQ+H EAP DILVFLTGQEEIE++ + ++ LP+ ++ +P+++SL
Sbjct: 273 AALVSVFQIH-QEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYASL 331
Query: 298 PSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
P QQ+RVF A G+RKVI++TNIAETS+TI GIKYV+D G VKA+ Y+P G+E L V
Sbjct: 332 PYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAV 391
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGV 417
+SK QA QR+GRAGRE G C+RLY E+EF+K + T PEI+RCNL++V+LQL A+ V
Sbjct: 392 QRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQLLAMKV 451
Query: 418 DDIIGFDFMEKPSRASIIKSLEQLFLLGAL--TDDCKLSDPVGHQMARLPLDPIYSKALI 475
+++ FDFM KPS I ++ QL LLGAL DD P+G +MA PL+P ++K ++
Sbjct: 452 PNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKTIL 511
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFRSPG 504
++ +F+C EE+L V++LSV+S+ P
Sbjct: 512 MSPKFHCTEEILTIVSLLSVDSVLHNPPS 540
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/506 (45%), Positives = 336/506 (66%), Gaps = 53/506 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QR++LP+ ++ L++ VR N L+IVGETGSGKTTQ+ Q+L GF G +IG T
Sbjct: 476 ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYG-MIGCT 534
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVAAV+VAKRVAEE G ++G VGY+IRF+D T TRIK EALLDP +
Sbjct: 535 QPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEM 594
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
S+YS I++DEAHERTV TDVL LLKK R +
Sbjct: 595 SKYSVIMLDEAHERTVATDVLFALLKKAAIKRPE-------------------------- 628
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD 236
LK+I+ SA+L++ FSEYF +++ G+ FPVE+LY+ P+ D
Sbjct: 629 ---------------LKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMD 673
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
Y++A L + +H++E PGDILVFLTGQEEI+S ++ +R+ L ++ +L+ +P++S+
Sbjct: 674 YIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSA 733
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
LPSE Q ++F P G RKV+ ATNIAETS+TI GI YV+DPGF K +Y+ G+E L+
Sbjct: 734 LPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLI 793
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKAL 415
V PIS+AQA QR GRAGR GPGKC+RLY E+ F +++ ++T PEI+R NLS+ IL LKA+
Sbjct: 794 VSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAM 853
Query: 416 GVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALI 475
G++D++ FDFM+ P + ++ +L +L+ L +L D+ KL++ +G +M+ P+DP S++L+
Sbjct: 854 GINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTN-LGKEMSLFPMDPTLSRSLL 912
Query: 476 VAGQFNCLEEMLITVAMLSVESIFFR 501
+ C +E++ ++MLSV+++F+R
Sbjct: 913 SSVDNQCSDEIVTIISMLSVQNVFYR 938
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 237/515 (46%), Positives = 330/515 (64%), Gaps = 53/515 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ V + ILII GETGSGKTTQ+PQ+LF G+ + G I
Sbjct: 393 KESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKI 452
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTST---------RIKEALLD 113
TQPRRVAA++VA RVA E GV+LG VGYSIRF+D TS T ++E L +
Sbjct: 453 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 512
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
P L+ YS ++VDEAHERT+HTD+L GL+K V R +
Sbjct: 513 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE----------------------- 549
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LK+++ SA+LD FS +F A + GR+FPV+I YT P
Sbjct: 550 ------------------LKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAP 591
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
E DYL+A ++++ Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI
Sbjct: 592 EADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 651
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+++LPS+ Q R+F P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GME
Sbjct: 652 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 711
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQL 412
SL V P SKA A QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L L
Sbjct: 712 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 771
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
K+LG+ D++ FDF++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK
Sbjct: 772 KSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSK 830
Query: 473 ALIVAGQFNCLEEMLITVAMLSV-ESIFFRSPGEV 506
++ + +++C EE+L AMLSV SIF+R +V
Sbjct: 831 MILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 865
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/522 (44%), Positives = 327/522 (62%), Gaps = 63/522 (12%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QPRRVAAVTVA RVAEE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGD------------------------- 201
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA----------VHVQGRQFPV 225
L+LI+ SA+LDA F ++F + + V+GR FPV
Sbjct: 202 ----------------LRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPV 245
Query: 226 EILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPE 283
+I Y P PDY+ +T+ T+ ++H E GD+L FLTGQEE+E+V ++ Q R L
Sbjct: 246 DIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTG 305
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK
Sbjct: 306 MKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKL 365
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
R Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R
Sbjct: 366 RAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRS 425
Query: 404 NLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMAR 463
NL+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 426 NLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAE 485
Query: 464 LPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 505
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 486 FPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQ 527
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/513 (46%), Positives = 334/513 (65%), Gaps = 57/513 (11%)
Query: 4 QKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIG 63
+ I QQR+ LP+ + ++++ +R+N+++IIVGETGSGKTTQL Q+L GF D LIG
Sbjct: 432 KSIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFG-DSGLIG 490
Query: 64 VTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQPRRVAA++VA+RVA+E GV+LGQ VGY+IRF+D TS T IK E L D
Sbjct: 491 CTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDG 550
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
L +YSAII+DEAHER+++TDVL GLL++V R
Sbjct: 551 SLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKR-------------------------- 584
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFG--CAKAVHVQGRQFPVEILYTLY 232
A LKLI+ SA++DA F+++FG C + GR FPVE+ +
Sbjct: 585 ---------------ADLKLIVTSATMDADKFADFFGGNCP-TFTIPGRTFPVELFHART 628
Query: 233 PEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVP 292
P DY+DA + +HL GDIL+F+ GQE+IE +++E+L +L EA L +P
Sbjct: 629 PVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDEAP-PLAVLP 687
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
I+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VIDPGF K ++Y+P GM
Sbjct: 688 IYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGM 747
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQ 411
++L + P+S+A A QR+GRAGR GPG+C+RLY E +F D+L ST PEI+R NL+NV+L
Sbjct: 748 DALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLL 807
Query: 412 LKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYS 471
LK+LGVDD++ F FM+ P + +++ S+ QL+ LGAL + +L+ P+G +M PLDP S
Sbjct: 808 LKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLT-PMGRKMVEFPLDPTLS 866
Query: 472 KALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 504
K LI++ + C +E+L V+MLSV +IFFR G
Sbjct: 867 KMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKG 899
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/522 (44%), Positives = 326/522 (62%), Gaps = 63/522 (12%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR+ LP+ + ++ + ++IVGETG GK+TQ+PQ+L AG+ +G+++GVT
Sbjct: 47 IEQQRQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVT 106
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTST-STRIK---------EALLDPY 115
QPRRVAAVTVA RVAEE G LG VGY IRFDD T +TRIK E ++DP
Sbjct: 107 QPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPL 166
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L++YS I++DEAHERT++TD+ +GLLKK+Q R
Sbjct: 167 LTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGD------------------------- 201
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKA----------VHVQGRQFPV 225
L+LI+ SA+LDA F ++F + + V GR FPV
Sbjct: 202 ----------------LRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPV 245
Query: 226 EILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLV--QERLLQLPE 283
+I Y P PDY+ +T+ T+ ++H E GDIL FLTGQEE+E+V ++ Q R L
Sbjct: 246 DIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTG 305
Query: 284 ASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKA 343
R L +P+++ LPS +QM+VF + RKVI+ATN+AETS+TI GI YVID GFVK
Sbjct: 306 MKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKL 365
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRC 403
R Y+P +E L+VVP+S+A A QR+GR GR GKC+RLY E FDKL ST PE++R
Sbjct: 366 RAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRS 425
Query: 404 NLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMAR 463
NL+ VILQLKALG+D+++ F FM P S++++LE L+ LG L DC+L++P+G ++A
Sbjct: 426 NLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAE 485
Query: 464 LPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGE 505
PL+P+++K L+ +G F C +E+L AM+ +++IF P +
Sbjct: 486 FPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQ 527
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 329/515 (63%), Gaps = 53/515 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ G I
Sbjct: 392 KESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKI 451
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTST---------RIKEALLD 113
TQPRRVAA++VA RVA E GV+LG VGYSIRF+D TS T ++E L +
Sbjct: 452 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 511
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
P L+ YS ++VDEAHERT+HTD+L GL+K V R +
Sbjct: 512 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE----------------------- 548
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LK+++ SA++D FS +F A + GR+FPV+I YT P
Sbjct: 549 ------------------LKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAP 590
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
E DYL+A ++++ Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI
Sbjct: 591 EADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 650
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+++LPS+ Q R+F P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GME
Sbjct: 651 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 710
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQL 412
SL V P SKA A QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L L
Sbjct: 711 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 770
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
K+LG+ D++ FDF++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK
Sbjct: 771 KSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSK 829
Query: 473 ALIVAGQFNCLEEMLITVAMLSV-ESIFFRSPGEV 506
++ + +++C EE+L AMLSV SIF+R +V
Sbjct: 830 MILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 864
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 234/515 (45%), Positives = 329/515 (63%), Gaps = 53/515 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ I R+SLP+ + L+ + + +LII GETGSGKTTQ+PQ+LF G+ G I
Sbjct: 389 KESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKI 448
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTST---------RIKEALLD 113
TQPRRVAA++VA RVA E GV+LG VGYSIRF+D TS T ++E L +
Sbjct: 449 ACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSE 508
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
P L+ YS ++VDEAHERT+HTD+L GL+K V R +
Sbjct: 509 PDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPE----------------------- 545
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LK+++ SA++D FS +F A + GR+FPV+I YT P
Sbjct: 546 ------------------LKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAP 587
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
E DYL+A ++++ Q+H+ + PGDILVFLTGQEEIE+ ++Q+R +L R+L+ +PI
Sbjct: 588 EADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 647
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+++LPS+ Q R+F P G RKV++ATNIAETS+TI GI YV+DPGF K + Y+P GME
Sbjct: 648 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 707
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQL 412
SL V P SKA A QR+GRAGR GKCFRLY + +LE++T PEI+R +L NV+L L
Sbjct: 708 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 767
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
K+LG+ D++ FDF++ P +++ +LEQL+ LGAL +L+ G +MA LP+DP+ SK
Sbjct: 768 KSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS-GRKMAELPVDPMLSK 826
Query: 473 ALIVAGQFNCLEEMLITVAMLSV-ESIFFRSPGEV 506
++ + +++C EE+L AMLSV SIF+R +V
Sbjct: 827 MILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKV 861
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/511 (46%), Positives = 328/511 (64%), Gaps = 62/511 (12%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRR 69
RKSLP+ + L++ + + +L+IV ETGSGKTTQLPQFL AG+ + K I TQPRR
Sbjct: 415 RKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRR 474
Query: 70 VAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYS 120
VAA++VA RVA+E V LGQ VGYSIRF++ TS T IK E L +P L+ YS
Sbjct: 475 VAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYS 534
Query: 121 AIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINT 180
II+DEAHERT+HTD+L GL+K +
Sbjct: 535 VIIIDEAHERTLHTDILFGLVKDIA----------------------------------- 559
Query: 181 LKQCQGRKFAP-LKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYLD 239
+F P LK++I SA++DA FS YF A +V GR++PV+I YT PE +Y+
Sbjct: 560 -------RFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQ 612
Query: 240 ATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQE--RLL--QLPEASRKLVTVPIFS 295
A + TI Q+H + GDILVFLTGQ+EIE + +QE R+L ++PE ++ PI++
Sbjct: 613 AAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPE----IILCPIYA 668
Query: 296 SLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESL 355
+LPSE Q ++F P G RKV+LATNIAETS+TI G+ +VID GFVK +Y+P GMESL
Sbjct: 669 NLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESL 728
Query: 356 LVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKA 414
+ VP S+A A QR+GRAGR GPGKCFRLY + ++L+ T PEI+R NL+N++L LK+
Sbjct: 729 VSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKS 788
Query: 415 LGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKAL 474
LG+++++ FDFM+ P ++++SLE L+ LGAL + +L+ +G QMA P DP+ SK+L
Sbjct: 789 LGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTK-LGRQMAEFPTDPMLSKSL 847
Query: 475 IVAGQFNCLEEMLITVAMLSVESIFFRSPGE 505
I + ++ C+EE+L V+ML S F P +
Sbjct: 848 IASSKYGCVEEVLSIVSMLGEASSLFYRPKD 878
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/527 (45%), Positives = 322/527 (61%), Gaps = 65/527 (12%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK---- 60
+IL++R+ LP+ + + + N LI+VGETGSGKTTQ+PQF+ A +
Sbjct: 57 EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 116
Query: 61 -LIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
L+G TQPRRVAA++V++RVA+E V +G+ VGYSIRF+D TS+ T +K EA
Sbjct: 117 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 176
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILD 170
+ DP L RY II+DEAHERT+ TDVL GLLK+V R
Sbjct: 177 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPD-------------------- 216
Query: 171 RGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYT 230
LKL++MSA+L+A F EYF A + V GR PVEI YT
Sbjct: 217 ---------------------LKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYT 255
Query: 231 LYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVT 290
PE DYL+A + T+ Q+H+ E PGDILVFLTG+EEIE R + + + L + +
Sbjct: 256 QEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKV 315
Query: 291 VPIFSSLPSEQQMRVFAPAAAGF-------RKVILATNIAETSVTIPGIKYVIDPGFVKA 343
VP++S+LP Q ++F PA RK++++TNIAETS+TI GI YVIDPGF K
Sbjct: 316 VPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQ 375
Query: 344 RLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKR 402
++Y+P +ESLLV PISKA A QRSGRAGR PGKCFRLY E F+ L+ T PEI R
Sbjct: 376 KVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILR 435
Query: 403 CNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMA 462
NL+N +L LK LG+DD++ FDFM+ P+ +++++LE L LGAL D+ L+ G M+
Sbjct: 436 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDEGNLTK-TGEIMS 494
Query: 463 RLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRG 509
PLDP SK LIV+ +FNC E+L AMLSV + F R P E ++
Sbjct: 495 EFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVR-PREAQKA 540
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 236/512 (46%), Positives = 329/512 (64%), Gaps = 54/512 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ D +I
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMI 580
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQPRRVAA++VAKRV+EE G LG+ VGY+IRF+D TS ST IK E+L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLRE 640
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSD----------------------- 677
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LKLI+ SA++DA F+ +FG H+ GR FPV+IL++ P
Sbjct: 678 ------------------LKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTP 719
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
+ DY++A + QVHL APGDIL+F+ GQE+IE + E L +L E + L +PI
Sbjct: 720 QEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPI 778
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID G+ K ++++P GM+
Sbjct: 779 YSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMD 838
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQL 412
+L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T PEI+R NL+NV+L L
Sbjct: 839 ALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLL 898
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
K+LGV D++ F FM+ P +++ S+ QL++LGAL + L+ G M PLDP SK
Sbjct: 899 KSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSK 957
Query: 473 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 504
LIV+ C E+L+ V+MLSV +IF+R G
Sbjct: 958 MLIVSCDMGCSSEILLIVSMLSVPAIFYRPKG 989
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/512 (45%), Positives = 329/512 (64%), Gaps = 54/512 (10%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLI 62
++ IL+QR+ LPI +V++ L+ +R N I+I+VGETGSGKTTQL Q+L G+ D +I
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT-DYGMI 580
Query: 63 GVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLD 113
G TQPRRVAA++VAKRV+EE G LG+ VGY+IRF+D TS +T IK E+L +
Sbjct: 581 GCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLRE 640
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
L YSAII+DEAHER+++TDVL GLL++V RS
Sbjct: 641 ADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSD----------------------- 677
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYP 233
LKLI+ SA++DA F+ +FG H+ GR FPV+IL++ P
Sbjct: 678 ------------------LKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTP 719
Query: 234 EPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
+ DY++A + QVHL APGDIL+F+ GQE+IE + E L +L E + L +PI
Sbjct: 720 QEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPI 778
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+S LPS+ Q ++F A G RK I+ATNIAETS+T+ GI +VID G+ K ++++P GM+
Sbjct: 779 YSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMD 838
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQL 412
+L + PIS+A A QRSGRAGR GPG+CFRLY ++ + ++L +T PEI+R NL+NV+L L
Sbjct: 839 ALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLL 898
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
K+LGV D++ F FM+ P +++ S+ QL++LGAL + L+ G M PLDP SK
Sbjct: 899 KSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTS-TGRLMVEFPLDPALSK 957
Query: 473 ALIVAGQFNCLEEMLITVAMLSVESIFFRSPG 504
LIV+ C E+L+ V+MLSV +IF+R G
Sbjct: 958 MLIVSCDMGCSSEILLIVSMLSVPAIFYRPKG 989
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/504 (44%), Positives = 333/504 (66%), Gaps = 54/504 (10%)
Query: 8 QQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQP 67
+QR+ LP +V ++L+ +R N +LI+VGETGSGKTTQL QFL+ G+ R+G +IG TQP
Sbjct: 487 EQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNG-MIGCTQP 545
Query: 68 RRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSR 118
RRVAA++VAKRV+EE GV LG VGYSIRF+D T T IK E+L+ L +
Sbjct: 546 RRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEK 605
Query: 119 YSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGI 178
YS II+DEAHER+++TD+L+GLLKKV L R D
Sbjct: 606 YSVIIMDEAHERSLNTDILMGLLKKV------------------------LSRRRD---- 637
Query: 179 NTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPDYL 238
+KL++ SA+++++ FS++FG A + GR +PV+I++ P DY+
Sbjct: 638 -------------IKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYV 684
Query: 239 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 298
+A + + Q+HL + GDILVF+TGQE+IE+ ++ +RL QL +A R L +PI+S +P
Sbjct: 685 EAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDAPR-LSILPIYSQMP 743
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
++ Q ++F A G RKV++ATNIAETS+T+ GI YV+D G+ K ++Y+ G+++L V
Sbjct: 744 ADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVT 803
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQLKALGV 417
PIS+A A QR+GRAGR GPG +RLY E + ++ ++T PEI+R NLSN +L LK+LGV
Sbjct: 804 PISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKSLGV 863
Query: 418 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 477
++I FDFM++P +++ SL +L+ LGAL + KL+ +G +M+ P+DP SK +I+A
Sbjct: 864 EEISDFDFMDRPPNDTLMASLYELWTLGALDNFGKLT-TLGKKMSLFPMDPSLSKLIIIA 922
Query: 478 GQFNCLEEMLITVAMLSVESIFFR 501
+ C EE++ V+MLSV S+F+R
Sbjct: 923 EDYKCTEEIITIVSMLSVPSVFYR 946
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 231/505 (45%), Positives = 315/505 (62%), Gaps = 59/505 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKL-IGV 64
I + RK LP+ + L++E++KN +LII+GETGSGKTTQLPQ+L GF GKL I +
Sbjct: 216 IQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAI 275
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRI----------KEALLDP 114
TQPRRVAA +VA RVA+E V LG+ VGY IRF+D+T+ + + +E L D
Sbjct: 276 TQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDS 335
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
LS+YS I++DEAHERT+ TD+L+GLLK + R
Sbjct: 336 KLSKYSCIMIDEAHERTLATDILIGLLKDILPQR-------------------------- 369
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 234
LKL+I SA+++A+ FSE+F +V GR++PV+I YTL PE
Sbjct: 370 ---------------PTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPE 414
Query: 235 PDYLDATLITIFQVHLDEA-PGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
+Y+ A + TIFQ+H ++ PGDILVFLTGQEEIE + ++E + +L +++++ PI
Sbjct: 415 ANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPI 474
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+++LP EQQ+++F P RKV+LATNIAETS+TI GI+YVIDPGFVK Y P GM
Sbjct: 475 YANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMT 534
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIKRCNLSNVILQL 412
LL VP S+A QR+GRAGR GPGKCFR++ + + +LE KPEI R NLSN +L L
Sbjct: 535 QLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLL 594
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSK 472
+LGV D+I F M+KPS ++ KSLE L++LGAL ++ +G M P +P ++K
Sbjct: 595 LSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITR-LGKMMCEFPCEPEFAK 653
Query: 473 ALIVAGQF-NC---LEEMLITVAML 493
L A C LEE L V+ML
Sbjct: 654 VLYTAATHEQCQGVLEECLTIVSML 678
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 237/511 (46%), Positives = 323/511 (63%), Gaps = 64/511 (12%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
+IL++RK LP+ ++ ++ +++N ++I+VGETGSGKTTQ+PQF+ AG R GK++GV
Sbjct: 69 EILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGV 128
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQPRRVAA++VAKRV+EE ELG+ VGYSIRF++ +S T +K E++ DP
Sbjct: 129 TQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPT 188
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L++Y II+DEAHERT+ TD+L GL+K IL R D
Sbjct: 189 LNKYDVIILDEAHERTLSTDILFGLIKD------------------------ILKRRKD- 223
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEP 235
LKLI+MSA+L+A F +YF A + V GR PVEI YT
Sbjct: 224 ----------------LKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAK 267
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIES----VERLVQERLLQLPEASRKLVTV 291
DYL++ + T+ +H +E GDILVFLTG+EEIE ++R +ER LP + T+
Sbjct: 268 DYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRER--GLPP----MKTL 321
Query: 292 PIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKG 351
P++SSLP QQ ++F RK I++TNIAETS+TI GI +V+DPGF K + Y+P
Sbjct: 322 PLYSSLPIYQQSKIFDTCKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSR 379
Query: 352 MESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLE-DSTKPEIKRCNLSNVIL 410
+ESLLV PISKA A QR+GRAGR PGKCFRLY E F +L T PEI R NL++V+L
Sbjct: 380 VESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVL 439
Query: 411 QLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIY 470
QL LGV D++ FDFM+ P ++I++LE L LGAL D+ +L++ +G M+ PLDP
Sbjct: 440 QLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTE-IGSIMSEFPLDPQL 498
Query: 471 SKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
SK LIV+ + +C E+L AMLS + F R
Sbjct: 499 SKMLIVSAERSCSNEILTIAAMLSAPNCFMR 529
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/522 (44%), Positives = 323/522 (61%), Gaps = 61/522 (11%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCR-DGKLIG 63
KIL+ R+ LP+ + ++ +N I++ VGETGSGKTTQ+PQF+ + I
Sbjct: 67 KILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIA 126
Query: 64 VTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQPRRVAA++VAKRVA+E V+LG+ VGY+IRF+D + +T +K EA+ D
Sbjct: 127 CTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDH 186
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
LSRYS II+DEAHERT+ TD+L+GL+K++ R
Sbjct: 187 MLSRYSCIILDEAHERTLATDILMGLMKRLATRRPD------------------------ 222
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 234
LK+I+MSA+LDA+ F +YF A + V GR +PVEI YT PE
Sbjct: 223 -----------------LKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPE 265
Query: 235 PDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPE--ASRKLVTVP 292
DYL+A L T+ Q+H++E PGDILVFLTG+EEIE R + L A+ L P
Sbjct: 266 RDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYP 325
Query: 293 IFSSLPSEQQMRVFAPA----AAGF-RKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
++ SLP QQ R+F P +G+ RKV+++TNIAETS+TI GI YV+DPGF K ++Y+
Sbjct: 326 LYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYN 385
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLS 406
P +ESLLV PISKA A QR+GRAGR PGKCFRLY E F K L + T PEI R NLS
Sbjct: 386 PRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLS 445
Query: 407 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 466
+ +L+LK LG+DD++ FD+M+ P+ +++++LE+L L L D+ L+ P+G + + PL
Sbjct: 446 STVLELKKLGIDDLVHFDYMDPPAPETMMRALEELNYLNCLDDNGDLT-PLGRKASEFPL 504
Query: 467 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 508
DP + LI + +F C E+L A+LSV ++F R P R+
Sbjct: 505 DPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVR-PNSARK 545
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 234/522 (44%), Positives = 319/522 (61%), Gaps = 60/522 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQF-LFHAGFCRDGKLIGV 64
IL+ R+ LP+ + ++ + N I++ VGETGSGKTTQ+PQF LF + +
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQPRRVAA++VA+RVAEE V+LG+ VGYSIRF+++TS T +K EA+ D
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
LSRYS II+DEAHERT+ TD+L+GLLK+V R
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPD------------------------- 240
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEP 235
LK+IIMSA+LDA F YF A + V GR +PVE+ YT +
Sbjct: 241 ----------------LKIIIMSATLDAEKFQRYFNDAPLLAVPGRTYPVELYYTPEFQR 284
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQL--PEASRKLVTVPI 293
DYLD+ + T+ Q+H E GDIL+FLTG++EIE R + QL E L P+
Sbjct: 285 DYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLSVYPL 344
Query: 294 FSSLPSEQQMRVFAPAAAGF-----RKVILATNIAETSVTIPGIKYVIDPGFVKARLYDP 348
+ SLP QQ R+F PA RKV+++TNIAETS+TI GI YV+DPGF K ++Y+P
Sbjct: 345 YGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNP 404
Query: 349 VKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCNLSN 407
+ESLLV PISKA A QR+GRAGR PGKCFRLY E F K L + + PEI R NLS+
Sbjct: 405 RIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSS 464
Query: 408 VILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLD 467
+L+LK LG+DD++ FDFM+ P+ +++++LE+L L L D+ L+ P+G ++ PLD
Sbjct: 465 TVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLACLDDEGNLT-PLGRLASQFPLD 523
Query: 468 PIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRG 509
P+ + LI + +F C +E+L VAMLSV ++F R + +R
Sbjct: 524 PMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRA 565
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/513 (42%), Positives = 306/513 (59%), Gaps = 61/513 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVT 65
I QQR LPI ++ + +IIVGETG GK+TQ+PQFL AG+ DG+ I +T
Sbjct: 70 IQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVIT 129
Query: 66 QPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYL 116
QPRRVA VT+A RVAEE LG VGY++RFDD + T++K E L DP L
Sbjct: 130 QPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLL 189
Query: 117 SRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTN 176
S+YS I++DEAHER+ +TD+LLGLL+K+ R ND
Sbjct: 190 SKYSIIMIDEAHERSCNTDILLGLLRKIIQIR------------------------ND-- 223
Query: 177 GINTLKQCQGRKFAPLKLIIMSASLDARGFSEYF----------GCAKAVHVQGRQFPVE 226
L++I+ SA+LDA F ++F A + V+GR PV
Sbjct: 224 ---------------LRIIVSSATLDAELFKDFFEMNETGNSDKDTAGIISVEGRTHPVA 268
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASR 286
+ +T PDY + + T+ +H E PGDILVFLTGQ+E+E V ++E L R
Sbjct: 269 VHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDR 328
Query: 287 KLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLY 346
L VP + +LP+ +QM+ F G RKV++ATNIAE S+TIPGI YVID G+VK R
Sbjct: 329 -LWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQ 387
Query: 347 DPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLS 406
G+E+L+ V +SKA A QR+GRAGR PGKC+RLYPE+EF++ + T PEI+RC ++
Sbjct: 388 HAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEFERFAEGTVPEIQRCQMA 447
Query: 407 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 466
+ ILQLKALGV ++ F ++ P ++I LE L+ LGA+ + +L+ P+G QMA PL
Sbjct: 448 STILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPL 507
Query: 467 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 499
P++SK L+ + +F C EM+ VAM+ ++ +F
Sbjct: 508 PPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVF 540
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/526 (42%), Positives = 315/526 (59%), Gaps = 67/526 (12%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFH-------AGFCRD 58
I ++R LP+ +++ +E +R N + +VGETGSGKTTQ+PQ+
Sbjct: 69 IWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQ 128
Query: 59 GKLIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------E 109
+L+ TQPRRVAA++VA RVAEE V LGQ VGYSIRF+D S T +K E
Sbjct: 129 ARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLRE 188
Query: 110 ALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMIL 169
A+ P L +Y +I+DEAHERT+ TD+L+GL+K++ R
Sbjct: 189 AMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNR--------------------- 227
Query: 170 DRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY 229
A +K++IMSA+LDA F YF + V GR FPVEI +
Sbjct: 228 --------------------ADIKVVIMSATLDAGKFQRYFEDCPLLSVPGRTFPVEIFF 267
Query: 230 TLYPEPDYLDATLITIFQVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKL 288
T E DYL+A + T+ Q+H+ +E GDIL+FLTGQEEIE + + + L + L
Sbjct: 268 TPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKRIDREIQALGADAGAL 327
Query: 289 VTVPIFSSLPSEQQMRVFAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
+P++S+LP Q R+F PA A RK +++TNIAETS+TI G+ +VIDPGF K
Sbjct: 328 SCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSK 387
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTKPEIK 401
++Y+P +ESLLV PISKA A+QR+GRAGR PGKCFRLY E + +++D T PEI
Sbjct: 388 QKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEIL 447
Query: 402 RCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQM 461
R NL +V+LQLK LG +D++ FDFM+ P+ +++++LE L L A+ DD +L++ +G M
Sbjct: 448 RSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTE-LGSLM 506
Query: 462 ARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVR 507
A PLDP +K LI + + NC E+L AMLSV + R P E+R
Sbjct: 507 AEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVR-PNEMR 551
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/523 (43%), Positives = 318/523 (60%), Gaps = 62/523 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV- 64
IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G GV
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 65 -TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQPRRVAA++VA+RVA+E V LGQ VGYSIRF+D +S T +K EA+ DP
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSD------------------------ 285
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 234
LK+I+MSA+LDA F YF + + GR PVEI YT PE
Sbjct: 286 -----------------LKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPE 328
Query: 235 PDYLDATLITIFQVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
DYL+A + T+ Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P+
Sbjct: 329 RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPL 388
Query: 294 FSSLPSEQQMRVFAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
+S+LP +QQ R+F P A RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+
Sbjct: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 448
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLS 406
P +ESLLV ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL
Sbjct: 449 PRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLG 508
Query: 407 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 466
+V+LQLK LG+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PL
Sbjct: 509 SVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPL 567
Query: 467 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRG 509
DP +K +I + +NC E+L AMLSV F R P E ++
Sbjct: 568 DPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVR-PTEAKKA 609
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 402 bits (1033), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/523 (43%), Positives = 318/523 (60%), Gaps = 62/523 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV- 64
IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G GV
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 65 -TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQPRRVAA++VA+RVA+E V LGQ VGYSIRF+D +S T +K EA+ DP
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSD------------------------ 285
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 234
LK+I+MSA+LDA F YF + + GR PVEI YT PE
Sbjct: 286 -----------------LKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPE 328
Query: 235 PDYLDATLITIFQVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
DYL+A + T+ Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P+
Sbjct: 329 RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPL 388
Query: 294 FSSLPSEQQMRVFAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
+S+LP +QQ R+F P A RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+
Sbjct: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 448
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLS 406
P +ESLLV ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL
Sbjct: 449 PRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLG 508
Query: 407 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 466
+V+LQLK LG+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PL
Sbjct: 509 SVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPL 567
Query: 467 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRG 509
DP +K +I + +NC E+L AMLSV F R P E ++
Sbjct: 568 DPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVR-PTEAKKA 609
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 229/523 (43%), Positives = 318/523 (60%), Gaps = 62/523 (11%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV- 64
IL++R LP+ + R + + ++ ++VGETGSGKTTQ+PQ+ G GV
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 65 -TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDP 114
TQPRRVAA++VA+RVA+E V LGQ VGYSIRF+D +S T +K EA+ DP
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 115 YLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGND 174
L RY II+DEAHERT+ TD+L+G+LK+V RS
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSD------------------------ 285
Query: 175 TNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPE 234
LK+I+MSA+LDA F YF + + GR PVEI YT PE
Sbjct: 286 -----------------LKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPE 328
Query: 235 PDYLDATLITIFQVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPI 293
DYL+A + T+ Q+H+ +E GD+L+FLTGQEEI+ + ++ + L + +P+
Sbjct: 329 RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPL 388
Query: 294 FSSLPSEQQMRVFAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
+S+LP +QQ R+F P A RKV+++TNIAETS+TI G+ +VIDPGF K ++Y+
Sbjct: 389 YSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYN 448
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLS 406
P +ESLLV ISKA A QR+GRAGR PGKCFRLY E + +++D+T PEI R NL
Sbjct: 449 PRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLG 508
Query: 407 NVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPL 466
+V+LQLK LG+DD++ FDFM+ P+ +++++LE L L AL DD L++ +G MA PL
Sbjct: 509 SVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTE-LGSMMAEFPL 567
Query: 467 DPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRRG 509
DP +K +I + +NC E+L AMLSV F R P E ++
Sbjct: 568 DPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVR-PTEAKKA 609
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/525 (43%), Positives = 325/525 (61%), Gaps = 70/525 (13%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRD-GKL 61
+ I ++ LP+ +L+ +R+N +++I+GETGSGKTTQL Q+L+ G+ D GK
Sbjct: 340 KDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKS 399
Query: 62 IGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRT-STSTRIK---------EAL 111
I VTQPRRVAA++VAKRVA E V LG+ VGYSIRF+D T S T++K E L
Sbjct: 400 IVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETL 459
Query: 112 LDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDR 171
LD L +YS +I+DEAHER+++TD+LLG K ++L R
Sbjct: 460 LDDTLDKYSCVIIDEAHERSLNTDILLGFFK------------------------ILLAR 495
Query: 172 GNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTL 231
D LKLII SA+++A+ FS +FG A + GR FPV+ +YT
Sbjct: 496 RRD-----------------LKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQTIYTS 538
Query: 232 YPEPDYLDATLITIFQVHL--DEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLV 289
P DY++A + ++HL D + GDIL+F+TGQE+IE+ +QE+ LQ+ S+K
Sbjct: 539 NPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQV--YSKKFG 596
Query: 290 T-----------VPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDP 338
T +PI+S+LP++ Q ++F RK+I+ATNIAETS+TI GI+YVID
Sbjct: 597 TANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDC 656
Query: 339 GFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEF-DKLEDSTK 397
G+ K ++Y+P G++SL++ PISKA A QRSGRAGR PG +RLY E+ F + + T
Sbjct: 657 GYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTI 716
Query: 398 PEIKRCNLSNVILQLKALGV-DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDP 456
PEI+R NLSN +L LK+L V D++ F F++KP + + SL +L+ +GA+ +L+ P
Sbjct: 717 PEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLT-P 775
Query: 457 VGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
+G QMA+ PL P SK L++A + C +EML V+MLSV +F+R
Sbjct: 776 LGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYR 820
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/504 (39%), Positives = 295/504 (58%), Gaps = 52/504 (10%)
Query: 9 QRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPR 68
Q+K LPI +L+ V +N I I++G TG GKTTQ+PQFL+ AG+ +IG TQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 69 RVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRY 119
R+ A +V++RV+ E G GYSI+FD S T+IK E DP L RY
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 120 SAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGIN 179
S +I+DE HERT+ TD+LLG+LK+ IL++ ND
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKR------------------------ILEKRND----- 171
Query: 180 TLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAK--AVHVQGRQFPVEILYTLYPEPDY 237
+L++ SAS+DA S++FG K + ++G+ FPVE L+ P +Y
Sbjct: 172 ------------FRLVLSSASVDANKLSQFFGQDKVCTMSIEGKLFPVETLFLQKPTENY 219
Query: 238 LDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSL 297
+D+ + T+ ++ PGDILVFL+G++EIE + +++ L+ E + LV +P+ + L
Sbjct: 220 VDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGL 279
Query: 298 PSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLV 357
++QMRVF FRKVI +TNIAETS+TI GI YV+D GF K R+Y+P L+
Sbjct: 280 TVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLIN 339
Query: 358 VPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGV 417
VPISK+ A+QRSGRAGR GK FRLY E + +++ + +I C++S ++L LK LG+
Sbjct: 340 VPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLKGLGL 399
Query: 418 DDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVA 477
+I+ F F +P ++ +LE L+LLG L + L+DP+G Q++ LD SKAL+ +
Sbjct: 400 KNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTS 459
Query: 478 GQFNCLEEMLITVAMLSVESIFFR 501
QF C E+L ++L+ +F+
Sbjct: 460 NQFGCTHEILSIASILTAGEVFYN 483
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 360 bits (923), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 201/514 (39%), Positives = 307/514 (59%), Gaps = 53/514 (10%)
Query: 6 ILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGF-CRDGKLIGV 64
+L+ R++LP+ ++ ++ + N + +++GETGSGK+TQ+PQF+ + + I V
Sbjct: 74 LLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAV 133
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPY 115
TQPRRVAA+ +A RVA+E G +LG++VGYS+RFD+ T+T TR+K E +++
Sbjct: 134 TQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSD 193
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L YS I++DEAHERTV TD++LG LK +
Sbjct: 194 LREYSVIVIDEAHERTVLTDLILGFLKSL------------------------------- 222
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEP 235
QG + L++I+MSA+L A FSE+F A + V+GR+F V+ Y P
Sbjct: 223 --------IQGPR-PDLRIIVMSATLQAEKFSEFFNNAPILFVEGRKFDVKQYYLKAPTD 273
Query: 236 DYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK--LVTVPI 293
D +DA + Q++ E GDIL FL GQEEI+ ++++ + + + +V P+
Sbjct: 274 DIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPL 333
Query: 294 FSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGME 353
+++LP+ QQ VFAP RKV+ +TNIAETSVTI G+K+V+D G K +++ G+
Sbjct: 334 YAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLA 393
Query: 354 SLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLK 413
+LL VPIS+A A+QRSGRAGRE GK FRLY E+++ KL ++PEI R ++++ +L LK
Sbjct: 394 TLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLK 453
Query: 414 ALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKA 473
GVDD++ + + E P + +I+ L++L+ LGAL K++ G QMA LPL P S
Sbjct: 454 RYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKR-GQQMALLPLQPHLSSV 512
Query: 474 LIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVR 507
LI A + CL +++ V+ LSVE++ E R
Sbjct: 513 LIKASEVGCLSQVIDIVSCLSVENLLLNPSPEER 546
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 354 bits (909), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 301/517 (58%), Gaps = 69/517 (13%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVA 71
+ PI K++++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQPR+VA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 AVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
A++VA+RVAEE LG +VGY +RFDD +S T IK L DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH--------------------------- 203
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD----- 236
LK+++MSA+++ S +FG + GR +PV E L D
Sbjct: 204 ---------LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTA 254
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK--------- 287
Y+ A + +HL+E GDILVFLTGQ EIE L L Q+ E+
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL----LFQMAESVDYDYDVQDTTL 310
Query: 288 --LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 345
L+ +P + S+ ++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK
Sbjct: 311 DGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLN 370
Query: 346 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCN 404
++P G++ L VVPISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +
Sbjct: 371 HNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTS 430
Query: 405 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 464
L++V+L LK L + D+I F +++ P+ I+++L+QL+ A+ ++ +G M
Sbjct: 431 LTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEF 489
Query: 465 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
PL P + A+I A +C + +L AMLSVE++F R
Sbjct: 490 PLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIR 526
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 354 bits (909), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 207/517 (40%), Positives = 301/517 (58%), Gaps = 69/517 (13%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVA 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 AVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
A++VA+RVAEE LG +VGY +RFDD +S T IK L DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH--------------------------- 203
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD----- 236
LK+++MSA+++ S +FG + GR +PV E L D
Sbjct: 204 ---------LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTA 254
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK--------- 287
Y+ A + +HL+E GDILVFLTGQ EIE L L Q+ E+
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL----LFQMAESVDYDYDVQDTTL 310
Query: 288 --LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 345
L+ +P + S+ ++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK
Sbjct: 311 DGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLN 370
Query: 346 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCN 404
++P G++ L VVPISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +
Sbjct: 371 HNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTS 430
Query: 405 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 464
L++V+L LK L + D+I F +++ P+ I+++L+QL+ A+ ++ +G M
Sbjct: 431 LTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEF 489
Query: 465 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
PL P + A+I A +C + +L AMLSVE++F R
Sbjct: 490 PLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIR 526
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 354 bits (908), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 208/517 (40%), Positives = 299/517 (57%), Gaps = 69/517 (13%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVA 71
+ PI K+L++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQPR+VA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 AVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
A++VA+RVAEE LG +VGY +RFDD +S T IK L DP LS++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQDKSPNRKEH--------------------------- 203
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD----- 236
LK+++MSA+++ S +FG + GR +PV E L D
Sbjct: 204 ---------LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTA 254
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK--------- 287
Y+ A + +HL+E GDILVFLTGQ EIE L L Q+ E+
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL----LFQMAESVDYDYDVQDTTL 310
Query: 288 --LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 345
L+ +P + S+ ++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK
Sbjct: 311 DGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLN 370
Query: 346 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCN 404
++P G++ L VVPISK++ALQRSGRAGR GKCFR+Y + + + + D PEIKR +
Sbjct: 371 HNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTS 430
Query: 405 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 464
L++V+L LK L + D+I F +++ P+ I+++L+QL+ A+ ++ +G M
Sbjct: 431 LTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEF 489
Query: 465 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
PL P + A+I A +C + +L AMLSVE++F R
Sbjct: 490 PLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIR 526
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/517 (39%), Positives = 301/517 (58%), Gaps = 69/517 (13%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVA 71
+ PI K++++ VR N LI+ G TGSGKTTQLP++L+ AGF + G +IGVTQPR+VA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHG-MIGVTQPRKVA 110
Query: 72 AVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
A++VA+RVAEE LG +VGY +RFDD +S T IK L DP L+++S I
Sbjct: 111 AISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVI 170
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHERT+ TD+L GLLKK+ +S + H
Sbjct: 171 ILDEAHERTLTTDILFGLLKKLFQEKSPNRKEH--------------------------- 203
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-EILYTLYPEPD----- 236
LK+++MSA+++ S +FG + GR +PV E L D
Sbjct: 204 ---------LKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTA 254
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK--------- 287
Y+ A + +HL+E GDILVFLTGQ EIE L L Q+ E+
Sbjct: 255 YIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL----LFQMAESVDYDYDVQDTTL 310
Query: 288 --LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARL 345
L+ +P + S+ ++QQ R+F P G RK +++TNI+ TS+TI GI+YV+D GFVK
Sbjct: 311 DGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLN 370
Query: 346 YDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDK-LEDSTKPEIKRCN 404
++P G++ L VVPISK++ALQRSGRAGR GKCFR+Y ++ +++ + D PEIKR +
Sbjct: 371 HNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTS 430
Query: 405 LSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARL 464
L++V+L LK L + D+I F +++ P+ I+++L+QL+ A+ ++ +G M
Sbjct: 431 LTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTR-LGLSMVEF 489
Query: 465 PLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFR 501
PL P + A+I A +C + +L AMLSVE++F R
Sbjct: 490 PLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIR 526
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A10.06c PE=3 SV=1
Length = 1183
Score = 332 bits (850), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 207/558 (37%), Positives = 299/558 (53%), Gaps = 97/558 (17%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFC----RDGK 60
+I + R +LPI + E+R++E++ ND++II G TGSGKTTQLPQFLF AGF +
Sbjct: 390 EIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPG 449
Query: 61 LIGVTQPRRVAAVTVAKRVAEE-SGVELGQRVGYSIRFDDRTSTSTRIK---------EA 110
+I +TQPRRVAAV++AKRV+EE +G +V Y IRFD + T IK E
Sbjct: 450 MIAITQPRRVAAVSIAKRVSEELTG--FSSKVSYQIRFDSTINPDTAIKFMTDGILLREL 507
Query: 111 LLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILD 170
D L+ YSA+IVDEAHER+V+TD+LLGLL ++ R + +
Sbjct: 508 SSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKS---------------- 551
Query: 171 RGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSE----YFGCAKAVHVQGRQFPVE 226
+K PLKLIIMSA+L FSE + + + RQ+PV
Sbjct: 552 ---------------DQKVKPLKLIIMSATLRVTDFSENKLLFSVPPPIIKIDARQYPVS 596
Query: 227 ILYTLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLL------- 279
I + +PDYL + +H G ILVFLTGQ+E+E + +++++R +
Sbjct: 597 IHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLK 656
Query: 280 ---------------------------QLP----------EASRKLVTVPIFSSLPSEQQ 302
Q+P + S + +P++S L +E Q
Sbjct: 657 SRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQ 716
Query: 303 MRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISK 362
M+VF + G R I+ATN+AETS+TIP I+YV+D G K R+Y+ ++ V ISK
Sbjct: 717 MKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISK 776
Query: 363 AQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKPEIKRCNLSNVILQLKALGVDDII 421
A A QR+GRAGR GPG C+RLY FD + PEI R + +++LQ+K + +D+I
Sbjct: 777 ANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIA 836
Query: 422 GFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFN 481
F F P R+ + KSL+ L LGA+ + L+ +G QM+ PL P +SK LI+ Q
Sbjct: 837 NFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTK-LGEQMSLFPLSPRFSKMLIIGQQHG 895
Query: 482 CLEEMLITVAMLSVESIF 499
CL ++ V+ LS+ +F
Sbjct: 896 CLPYVIALVSALSINQLF 913
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 329 bits (843), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 249/410 (60%), Gaps = 51/410 (12%)
Query: 107 IKEALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSD 166
++E + DP L RY I++DEAHERTV TD+L+GLLK+V+ RS
Sbjct: 10 LREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQRSD---------------- 53
Query: 167 MILDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVE 226
LKL++MSA+LDA F YF A + V GR PVE
Sbjct: 54 -------------------------LKLVVMSATLDAGKFQHYFDNAPLMTVPGRTHPVE 88
Query: 227 ILYTLYPEPDYLDATLITIFQVHL-DEAPGDILVFLTGQEEIESVERLVQERLLQLPEAS 285
I YT PE DYL+A + T+ Q+H+ +E GD+L+FLTGQEEIE + ++ + L
Sbjct: 89 IFYTPEPERDYLEAAIRTVVQIHMCEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEV 148
Query: 286 RKLVTVPIFSSLPSEQQMRVFAPA------AAGFRKVILATNIAETSVTIPGIKYVIDPG 339
L T+P++S+LP Q R+F A A RKV+++TNIAETS+TI G+ +VIDPG
Sbjct: 149 GDLKTIPLYSTLPPAMQQRIFEHAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPG 208
Query: 340 FVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFD-KLEDSTKP 398
F K ++Y+P +ESLLV PISKA A QR GRAGR PGKCFRLY E +D +++D+T P
Sbjct: 209 FAKQKVYNPRIRVESLLVSPISKASAQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYP 268
Query: 399 EIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVG 458
EI R NL V+LQLK LG+DD++ FDFM+ P+ +++++LE L LGAL D L+ +G
Sbjct: 269 EILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLGALDDSGDLTR-LG 327
Query: 459 HQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRSPGEVRR 508
MA PLDP +K +I + ++C E+L AMLSV F R P E ++
Sbjct: 328 SMMAEFPLDPQLAKMVIASTDYSCSNEILSVTAMLSVPQCFLR-PNEAKK 376
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 315 bits (807), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 189/504 (37%), Positives = 284/504 (56%), Gaps = 68/504 (13%)
Query: 11 KSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRV 70
+SLP++ + + + + ++ ++++ GETGSGKTTQLP+ GF G +IG TQPRR+
Sbjct: 81 ESLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLG-MIGHTQPRRI 139
Query: 71 AAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSA 121
AA +VA R+AEE ELG VGY +RF+D+ S +T+IK E D +L++YS
Sbjct: 140 AARSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSC 199
Query: 122 IIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTL 181
+I+DEAHER+++ D +LG L
Sbjct: 200 LIIDEAHERSLNNDFILGYL---------------------------------------- 219
Query: 182 KQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD---YL 238
KQ R+ LKLII SA++D FS++F A + V GR +PVE+ Y E D L
Sbjct: 220 KQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTYPVEVRYRPVVEEDDQDQL 279
Query: 239 DATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSSLP 298
L + ++ E GDIL+F+ G+ EI +Q++ L+ E +P+F+ L
Sbjct: 280 QGILNAVDELQA-EGRGDILIFMNGEREIRDTAEALQKQNLKHTE------ILPLFARLS 332
Query: 299 SEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLLVV 358
+++Q ++F P+ G +++LATN+AETS+T+P IKYVIDPG + Y ++ L +
Sbjct: 333 AQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIE 390
Query: 359 PISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALGVD 418
PIS+A A QR GR GR G C RLY E +F+ + T PEI R NL++VILQ+ ALG+D
Sbjct: 391 PISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTDPEILRTNLASVILQMTALGLD 450
Query: 419 DIIGFDFMEKPSRASIIKSLEQLFLLGAL------TDDCKLSDPVGHQMARLPLDPIYSK 472
DI F F++ P I ++ L LGA + + +L VG Q+A+LP+DP +K
Sbjct: 451 DIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAK 510
Query: 473 ALIVAGQFNCLEEMLITVAMLSVE 496
++ A F C+ EM+I V+ LS++
Sbjct: 511 MILSAVNFGCVYEMMIIVSALSIQ 534
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 281/520 (54%), Gaps = 74/520 (14%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 154 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 209
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQPRR+A +++AKRV ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 210 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 269
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 270 LPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPD------------------------- 304
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILY------ 229
LK+I+MSA+++ FS YF A V V GR FP+ ++Y
Sbjct: 305 ----------------LKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAE 348
Query: 230 -------TLYPEPDYLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLP 282
L P P L +I + E GD+LVFL+G EI +V Q
Sbjct: 349 PTTSKSEKLDPRP--FLRVLESIDHKYPPEERGDLLVFLSGMAEISAVLEAAQ----TYA 402
Query: 283 EASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVK 342
+++ V +P+ S+L Q +VF A G RK IL+TNIAETSVTI GI++V+D G VK
Sbjct: 403 SHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVK 462
Query: 343 ARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKR 402
YDP ++ L IS+A A QR GRAGR GPG CFRLY E+++D PEI+R
Sbjct: 463 EMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRR 522
Query: 403 CNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMA 462
L +++LQ+K++ V D F F+E P AS+ ++ L GAL D + P+G +A
Sbjct: 523 VALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGAL-DSSEALTPIGSLLA 581
Query: 463 RLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRS 502
+LP+D + K LI+ F+ +E +L A LSV+S F RS
Sbjct: 582 QLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRS 621
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 305 bits (780), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 190/522 (36%), Positives = 280/522 (53%), Gaps = 78/522 (14%)
Query: 5 KILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGV 64
K+ ++R +LPIA R+++ ++++ ++++ G+TG GK+TQ+PQ+L AGF +
Sbjct: 156 KLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH----VAC 211
Query: 65 TQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRI---------KEALLDPY 115
TQPRR+A +++AKRV ES + G +VGY IRF+ S +T+I ++ +P
Sbjct: 212 TQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPS 271
Query: 116 LSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDT 175
L +Y +IVDE HER +H D LLG+L+++ R
Sbjct: 272 LPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPD------------------------- 306
Query: 176 NGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEP 235
LK+I+MSA+++ FS YF A V V GR FP+ ++Y +P
Sbjct: 307 ----------------LKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVY----QP 346
Query: 236 DYLDAT---------------LITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQ 280
D T L I + E GD+LVFL+G EI +V Q
Sbjct: 347 QEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAAQA---- 402
Query: 281 LPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGF 340
+++ V +P+ S+L Q +VF A AG RK IL+TNIAETSVTI GI++V+D G
Sbjct: 403 YASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGK 462
Query: 341 VKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEI 400
VK YDP ++ L IS+A A QR GRAGR GPG C+RLY E+++D PEI
Sbjct: 463 VKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEI 522
Query: 401 KRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQ 460
+R L ++LQ+K++ V D F F+E P AS+ ++ L GAL D + P+G
Sbjct: 523 RRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGAL-DSSEALTPIGSL 581
Query: 461 MARLPLDPIYSKALIVAGQFNCLEEMLITVAMLSVESIFFRS 502
+A+LP+D + K LI+ F+ E +L A LSV+S F RS
Sbjct: 582 LAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRS 623
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 299 bits (765), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/504 (37%), Positives = 277/504 (54%), Gaps = 70/504 (13%)
Query: 12 SLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVA 71
+LP++ ++ ++E +R + ++I+ GETGSGKTTQLP+ G G LIG TQPRR+A
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKG-LIGHTQPRRLA 134
Query: 72 AVTVAKRVAEESGVELGQRVGYSIRFDDRTSTSTRIK---------EALLDPYLSRYSAI 122
A TVA R+AEE E G +GY +RF D S +T +K E D L +Y I
Sbjct: 135 ARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTI 194
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHER+++ D LLG LK+ +L R D
Sbjct: 195 IIDEAHERSLNIDFLLGYLKE------------------------LLPRRPD-------- 222
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLY------PEPD 236
LK+II SA++D FS +F A + V GR +PVE+ Y E D
Sbjct: 223 ---------LKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERD 273
Query: 237 YLDATLITIFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRKLVTVPIFSS 296
L A + ++ E+ GDIL+F++G+ EI + + L+ E +P+++
Sbjct: 274 QLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKLNLRHTE------ILPLYAR 326
Query: 297 LPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGMESLL 356
L + +Q RVF + R+++LATN+AETS+T+PGIKYVIDPG + Y ++ L
Sbjct: 327 LSNSEQNRVFQSHSG--RRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 384
Query: 357 VVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQLKALG 416
+ PIS+A A QR GR GR G C RLY E++F + T PEI R NL++VILQ+ ALG
Sbjct: 385 IEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALG 444
Query: 417 VDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLS----DPVGHQMARLPLDPIYSK 472
+ DI F F+E P + +I + L LGA+T D + S P+G Q+++LP+DP ++
Sbjct: 445 LGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLAR 504
Query: 473 ALIVAGQFNCLEEMLITVAMLSVE 496
++ A + C+ E +I + LS++
Sbjct: 505 MVLEAQKHGCVREAMIITSALSIQ 528
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 264/512 (51%), Gaps = 76/512 (14%)
Query: 13 LPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGKLIGVTQPRRVAA 72
LPI + +++++++ I++++GETGSGK+TQL QFL +G ++ TQPR++AA
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIV-CTQPRKIAA 361
Query: 73 VTVAKRVAEES-GVELGQRVGYSIRFDDRTSTSTRI----KEALLDPY-----LSRYSAI 122
+T+ RV EES G V + F S+++ LL Y LS S +
Sbjct: 362 MTLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCV 421
Query: 123 IVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGNDTNGINTLK 182
I+DEAHER++ +T+ + L
Sbjct: 422 IIDEAHERSL-----------------------------------------NTDLLLALL 440
Query: 183 QCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPVEILYTLYPEPD------ 236
+ + L+L+IMSA+ DA S+Y +HV GR FPVEI+Y+ +
Sbjct: 441 RKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFPVEIVYSPSGTEENSVVGR 500
Query: 237 ---YLDATLITIFQVHLDEAPGDILVFLTGQEEIE-SVERLVQERLLQLPEASRKLVTVP 292
Y + ++H E G IL FLT Q E+E + ER V P A + +P
Sbjct: 501 IASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFVA------PSA----IALP 550
Query: 293 IFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYDPVKGM 352
+ L E+Q VF G RKVI ATNIAETS+TIPG+KYVID G VK Y+P GM
Sbjct: 551 LHGKLSFEEQFMVFQ-NYPGRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGM 609
Query: 353 ESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSNVILQL 412
L V +S++ A QR+GRAGR PG+C+RLY + +FD + + +PEI+R +L +L++
Sbjct: 610 SILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMNLNQEPEIRRVHLGVALLRM 669
Query: 413 KALGVDDIIGFDFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPV--GHQMARLPLDPIY 470
ALG+D+I F+F++ P +I +++ L LGA+ + + + GH + +L L+P
Sbjct: 670 LALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKL 729
Query: 471 SKALIVAGQFNCLEEMLITVA-MLSVESIFFR 501
K ++ + +E ++ A M + SIF R
Sbjct: 730 GKLILGCFRHRMGKEGIVLAAVMANASSIFCR 761
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 264/574 (45%), Gaps = 130/574 (22%)
Query: 10 RKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK----LIGVT 65
R+ LP ++K LV + + + +I GETG GKTTQ+ QF+ + GK I T
Sbjct: 204 REKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSACRIVCT 262
Query: 66 QPRRVAAVTVAKRVAEESGVELG--QRVGYSIRFDDR----------TSTSTRIKEALLD 113
QPRR++A++VA+RVA E G GY IR R +T ++ D
Sbjct: 263 QPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSD 322
Query: 114 PYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMILDRGN 173
PYLS S I++DE HER + +DVL+ ++K + N RS
Sbjct: 323 PYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSD----------------------- 359
Query: 174 DTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV-------- 225
LK+I+MSA+L+A FSEYFG +H+ G FPV
Sbjct: 360 ------------------LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDV 401
Query: 226 --EILY-----------------------------TLYPE--PDY--------------- 237
+I Y +Y E PDY
Sbjct: 402 IEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDV 461
Query: 238 --------LDATLIT--IFQVHLDEAPGDILVFLTGQEEIESVERLVQERLLQLPEASRK 287
+D LI I + L+E G ILVFL G + I ++ L+ + Q+ S K
Sbjct: 462 IEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLL---MSQVMFKSDK 518
Query: 288 LVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSVTIPGIKYVIDPGFVKARLYD 347
+ +P+ S +P+ Q +VF G RK+++ATNIAETS+TI + YVID G +K +D
Sbjct: 519 FLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFD 578
Query: 348 PVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPENEFDKLEDSTKPEIKRCNLSN 407
+ ++ +SKA A QR GRAGR PG C+ LY L+D PEI R L
Sbjct: 579 TQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEE 638
Query: 408 VILQLKALGVDDIIGF--DFMEKPSRASIIKSLEQLFLLGALTDDCKLSDPVGHQMARLP 465
+ LQ+K L + I F M+ PS +++ S+ L L AL +L+ P+G +ARLP
Sbjct: 639 LCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELT-PLGVHLARLP 697
Query: 466 LDPIYSKALIVAGQFNCLEEMLITVAMLSVESIF 499
++P K ++ F CL+ +L A LS + F
Sbjct: 698 VEPHIGKMILFGALFCCLDPVLTIAASLSFKDPF 731
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 232 bits (592), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 269/532 (50%), Gaps = 89/532 (16%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R Q+ LP+ + ++ + +N +++I G+TG GKTT++PQ L + +G+
Sbjct: 468 RGSSWQESHPLPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEH-YILEGRGA 526
Query: 61 --LIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDR----------TSTSTRIK 108
+ +TQPRR++A++VA+RVA+E G + + VGY +R + + + ++
Sbjct: 527 RCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCTVGILLR 586
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMI 168
+ +P L S ++VDE HER V+TD LL LLK +Q N D
Sbjct: 587 KLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKL----------------NPD-- 628
Query: 169 LDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--- 225
L+L++MSA+ D + FS YFG V V G +PV
Sbjct: 629 -----------------------LRLVLMSATGDNQRFSHYFGGCPVVKVPGFMYPVKEY 665
Query: 226 ---EIL----------YTLYPEPD--YLDATLIT--IFQVHLDEAPGDILVFLTGQEEIE 268
EIL Y + D LD LIT + Q+ PG IL FL G +EI+
Sbjct: 666 YLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIK 725
Query: 269 SVERLVQERLLQL--PEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETS 326
V Q+RLL++ + SR LV +P+ S++P Q +F G RK++LATNIAETS
Sbjct: 726 GV----QQRLLEMLGSQNSRYLV-LPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETS 780
Query: 327 VTIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPE 386
+TI I +V+D G K YD + L V +SK+ +QR GRAGR G + L+P
Sbjct: 781 ITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPR 840
Query: 387 NEFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLL-- 444
+ DK+ PEI R L N+++Q K + + + +F+ K + IK++++ +L
Sbjct: 841 SRLDKMPTYQVPEILRTPLENLVVQAK-IHMPEKTAVEFLSKALDSPDIKAVDEAVILLQ 899
Query: 445 --GALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLS 494
G L L+ +G ++A++ DP +KA+++A + CL +L+ V+ L+
Sbjct: 900 EIGVLDQREALTT-LGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLT 950
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30
PE=2 SV=1
Length = 1220
Score = 228 bits (582), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 265/531 (49%), Gaps = 86/531 (16%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R + Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 450 RGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGRGA 508
Query: 61 --LIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDR----------TSTSTRIK 108
+ +TQPRR++AV+VA+RV+ E G L + VG+ +R + + + ++
Sbjct: 509 RCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGILLR 568
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMI 168
+ +P L S ++VDE HER V+TD LL LLK +Q
Sbjct: 569 KLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQ----------------------- 605
Query: 169 LDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--- 225
R L+L++MSA+ D FS YFG + V G +PV
Sbjct: 606 ------------------RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEH 647
Query: 226 ---EILYTL----YPEPD---------YLDATLITIFQVHLDE--APGDILVFLTGQEEI 267
+IL L YP LD L+T +H+D PG IL FL G +EI
Sbjct: 648 YLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEI 707
Query: 268 ESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 327
+ V++ +QE L + E+ K + +P+ S++P Q +F G RK++LATNIAETS+
Sbjct: 708 KGVQQRLQE-ALGMHES--KYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSI 764
Query: 328 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 387
TI I +V+D G K YD + L V +S+A +QR GRAGR G + L+P +
Sbjct: 765 TINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 824
Query: 388 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLL--- 444
+K+ PEI R L N++LQ K + + + +F+ K + IK++++ +L
Sbjct: 825 RLEKMAPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQE 883
Query: 445 -GALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLS 494
G L D + +G ++A + DP +KA+++A F CL +L+ V+ L+
Sbjct: 884 IGVL-DQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 933
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 265/531 (49%), Gaps = 86/531 (16%)
Query: 3 RQKILQQRKSLPIASVEKRLVEEVRKNDILIIVGETGSGKTTQLPQFLFHAGFCRDGK-- 60
R I Q+ LP+ ++ + ++ +++I G+TG GKTT++PQ L + +G+
Sbjct: 424 RGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGRGA 482
Query: 61 --LIGVTQPRRVAAVTVAKRVAEESGVELGQRVGYSIRFDDR----------TSTSTRIK 108
+ +TQPRR++AV+VA+RV+ E G L + VG+ +R + + + ++
Sbjct: 483 RCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGILLR 542
Query: 109 EALLDPYLSRYSAIIVDEAHERTVHTDVLLGLLKKVQNARSKSADGHSNGNNNNENSDMI 168
+ +P L S +IVDE HER V+TD LL LLK +Q
Sbjct: 543 KLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQ----------------------- 579
Query: 169 LDRGNDTNGINTLKQCQGRKFAPLKLIIMSASLDARGFSEYFGCAKAVHVQGRQFPV--- 225
R L+L++MSA+ D FS YFG + V G +PV
Sbjct: 580 ------------------RLNPALRLVLMSATGDNERFSRYFGGCPVIKVPGFMYPVKEH 621
Query: 226 ---EILYTL----YPEPD---------YLDATLITIFQVHLDE--APGDILVFLTGQEEI 267
+IL L YP LD L+T +H+D PG IL FL G +EI
Sbjct: 622 YLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEI 681
Query: 268 ESVERLVQERLLQLPEASRKLVTVPIFSSLPSEQQMRVFAPAAAGFRKVILATNIAETSV 327
+ V++ +QE L + E+ K + +P+ S++P Q +F G RK++LATNIAETS+
Sbjct: 682 KGVQQRLQE-ALGMHES--KYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSI 738
Query: 328 TIPGIKYVIDPGFVKARLYDPVKGMESLLVVPISKAQALQRSGRAGREGPGKCFRLYPEN 387
T+ I +V+D G K YD + L V +S+A +QR GRAGR G + L+P +
Sbjct: 739 TVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRS 798
Query: 388 EFDKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFMEKPSRASIIKSLEQLFLL--- 444
+K+ PEI R L N++LQ K + + + +F+ K + IK++++ +L
Sbjct: 799 RLEKMVPFQVPEILRTPLENLVLQAK-IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQE 857
Query: 445 -GALTDDCKLSDPVGHQMARLPLDPIYSKALIVAGQFNCLEEMLITVAMLS 494
G L D + +G ++A + DP +KA+++A F CL +L+ V+ L+
Sbjct: 858 IGVL-DQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLT 907
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 184,271,281
Number of Sequences: 539616
Number of extensions: 7843832
Number of successful extensions: 64292
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 60929
Number of HSP's gapped (non-prelim): 2687
length of query: 511
length of database: 191,569,459
effective HSP length: 122
effective length of query: 389
effective length of database: 125,736,307
effective search space: 48911423423
effective search space used: 48911423423
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)