Your job contains 1 sequence.
>010423
MSSTLLEVTRAAHEEVERLERLVVKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIE
IYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENL
LKEEPLVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKLKMTR
QYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENGHVP
AQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDK
KHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALT
YEEMEAEREEQEETQVDTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEI
CGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIK
WRPELEEEYEDKEGNIYNKKTYTDLQRQGLI
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010423
(511 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2152855 - symbol:ATO "ATROPOS" species:3702 "A... 1888 6.3e-195 1
MGI|MGI:1922312 - symbol:Sf3a3 "splicing factor 3a, subun... 1108 2.9e-112 1
UNIPROTKB|Q4KLI7 - symbol:Sf3a3 "Protein Sf3a3" species:1... 1108 2.9e-112 1
UNIPROTKB|Q12874 - symbol:SF3A3 "Splicing factor 3A subun... 1107 3.6e-112 1
UNIPROTKB|E2QXU5 - symbol:SF3A3 "Uncharacterized protein"... 1101 1.6e-111 1
UNIPROTKB|F1SV40 - symbol:SF3A3 "Uncharacterized protein"... 1101 1.6e-111 1
UNIPROTKB|Q3SWY7 - symbol:SF3A3 "Splicing factor 3a, subu... 1099 2.6e-111 1
UNIPROTKB|Q5F387 - symbol:SF3A3 "Uncharacterized protein"... 1090 2.3e-110 1
ZFIN|ZDB-GENE-040908-1 - symbol:sf3a3 "splicing factor 3a... 1079 3.4e-109 1
FB|FBgn0014366 - symbol:noi "noisette" species:7227 "Dros... 996 2.1e-100 1
UNIPROTKB|E7EUT8 - symbol:SF3A3 "Splicing factor 3A subun... 948 8.6e-100 2
WB|WBGene00011758 - symbol:T13H5.4 species:6239 "Caenorha... 969 1.5e-97 1
UNIPROTKB|Q22469 - symbol:T13H5.4 "Protein T13H5.4" speci... 969 1.5e-97 1
DICTYBASE|DDB_G0270020 - symbol:sf3a3 "splicing factor 3A... 404 4.1e-77 2
ASPGD|ASPL0000009101 - symbol:AN8015 species:162425 "Emer... 712 2.6e-70 1
POMBASE|SPBC36.09 - symbol:sap61 "U2 snRNP-associated pro... 417 1.8e-68 2
UNIPROTKB|G4N2Q7 - symbol:MGG_12972 "Splicing factor 3a s... 670 7.4e-66 1
SGD|S000002188 - symbol:PRP9 "Subunit of the SF3a splicin... 331 3.2e-34 2
CGD|CAL0002401 - symbol:orf19.3178 species:5476 "Candida ... 317 1.6e-31 3
RGD|1308726 - symbol:Sf3a3 "splicing factor 3a, subunit 3... 233 7.1e-19 1
TAIR|locus:2125201 - symbol:AT4G01000 "AT4G01000" species... 159 1.6e-08 1
ZFIN|ZDB-GENE-050417-270 - symbol:zgc:112095 "zgc:112095"... 150 2.2e-07 1
MGI|MGI:2384788 - symbol:Sde2 "SDE2 telomere maintenance ... 149 2.4e-07 1
>TAIR|locus:2152855 [details] [associations]
symbol:ATO "ATROPOS" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0045694
"regulation of embryo sac egg cell differentiation" evidence=IMP]
[GO:0000741 "karyogamy" evidence=RCA] [GO:0006312 "mitotic
recombination" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0009561 "megagametogenesis" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0050826 "response
to freezing" evidence=RCA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GO:GO:0008270 GO:GO:0003676 EMBL:AP002544 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 OMA:FVYMGRR EMBL:AY039944 EMBL:AY113862
IPI:IPI00532165 RefSeq:NP_196234.3 UniGene:At.8012
ProteinModelPortal:Q9FG01 SMR:Q9FG01 IntAct:Q9FG01 STRING:Q9FG01
PRIDE:Q9FG01 EnsemblPlants:AT5G06160.1 GeneID:830503
KEGG:ath:AT5G06160 TAIR:At5g06160 InParanoid:Q9FG01
PhylomeDB:Q9FG01 ProtClustDB:CLSN2681031 ArrayExpress:Q9FG01
Genevestigator:Q9FG01 GO:GO:0045694 Uniprot:Q9FG01
Length = 504
Score = 1888 (669.7 bits), Expect = 6.3e-195, P = 6.3e-195
Identities = 363/511 (71%), Positives = 411/511 (80%)
Query: 1 MSSTLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIE 60
MSSTLLE TR+ H +DLQ EP S+KDRLVQ HRVR+MI++I TTE+L+E
Sbjct: 1 MSSTLLEQTRSNHEEVERLERLVVEDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVE 60
Query: 61 IYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENL 120
Y DKD A DEIAALGGQTATGTNVFS FYDRLKEIREYH+RHPS R+ VDA+EDYE
Sbjct: 61 TYEDKDGAWDDEIAALGGQTATGTNVFSEFYDRLKEIREYHKRHPSGRL-VDANEDYEAR 119
Query: 121 LKEEPLVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKLKMTR 180
LKEEP++ FSGEE GRYLDLH++YNQYINSKFG+ +EYSAYLDVFS+P +IPRKLK++R
Sbjct: 120 LKEEPIIAFSGEEGNGRYLDLHDMYNQYINSKFGERVEYSAYLDVFSQPEKIPRKLKLSR 179
Query: 181 QYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENGHVP 240
QY +Y+E LLEYL+YFFQRTEPLQDLDRI SKV +DFEEQ+ + EG +N +P
Sbjct: 180 QYMKYMEALLEYLVYFFQRTEPLQDLDRILSKVCSDFEEQYADGIV-----EGLDNELIP 234
Query: 241 AQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDK 300
+QH+ +DLDYYSTVEEL++VG E+LKE L A GLK GGT QQRAERLFLTKHTPL+KLDK
Sbjct: 235 SQHTVIDLDYYSTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDK 294
Query: 301 KHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALX 360
KHFA+ +QNG A +T E N K+IAL EAK+KKLC+LL ETIERT QN+ KKQ+L
Sbjct: 295 KHFARPPHNGKQNGDAKSTHESENAKEIALTEAKVKKLCNLLDETIERTKQNIVKKQSLT 354
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEI 420
IYNPLKLP+GWDGKPIPYWLYKLHGLGQEFKCEI
Sbjct: 355 YEEMEGEREGEEANTELESDDEDGL-IYNPLKLPIGWDGKPIPYWLYKLHGLGQEFKCEI 413
Query: 421 CGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIK 480
CGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWK+IQERQG K
Sbjct: 414 CGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNK 473
Query: 481 WRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
WRPELEEEYED+EGNIYNKKTY+DLQRQGLI
Sbjct: 474 WRPELEEEYEDREGNIYNKKTYSDLQRQGLI 504
>MGI|MGI:1922312 [details] [associations]
symbol:Sf3a3 "splicing factor 3a, subunit 3" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR000690
InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355 MGI:MGI:1922312
GO:GO:0008380 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
ChiTaRS:SF3A3 EMBL:BC009141 EMBL:AK015776 IPI:IPI00137848
RefSeq:NP_083433.1 UniGene:Mm.25779 ProteinModelPortal:Q9D554
SMR:Q9D554 STRING:Q9D554 PhosphoSite:Q9D554 PaxDb:Q9D554
PRIDE:Q9D554 Ensembl:ENSMUST00000030734 GeneID:75062 KEGG:mmu:75062
InParanoid:Q9D554 NextBio:342126 Bgee:Q9D554 CleanEx:MM_SF3A3
Genevestigator:Q9D554 GermOnline:ENSMUSG00000028902 Uniprot:Q9D554
Length = 501
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 229/517 (44%), Positives = 315/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ DFE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQTDFEKKWDNGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E + T +NVQ
Sbjct: 293 LESLDTSLFAKNPKSK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRQLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q4KLI7 [details] [associations]
symbol:Sf3a3 "Protein Sf3a3" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 RGD:1308726 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST
OrthoDB:EOG42FSHC EMBL:BC099183 IPI:IPI00565197
RefSeq:NP_001020869.1 UniGene:Rn.16732 SMR:Q4KLI7 STRING:Q4KLI7
Ensembl:ENSRNOT00000010373 GeneID:313583 KEGG:rno:313583
InParanoid:Q4KLI7 NextBio:666476 Genevestigator:Q4KLI7
Uniprot:Q4KLI7
Length = 501
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 229/517 (44%), Positives = 315/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ DFE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQTDFEKKWDNGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E + T +NVQ
Sbjct: 293 LESLDTSLFAKNPKSK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRQLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q12874 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0000389 "mRNA 3'-splice site recognition"
evidence=TAS] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005654 GO:GO:0046872
EMBL:CH471059 GO:GO:0016607 GO:GO:0008270 Reactome:REACT_1675
GO:GO:0003676 GO:GO:0071013 EMBL:AL603790 GO:GO:0000389
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935 PDB:2DT7 PDBsum:2DT7
EMBL:U08815 EMBL:X81789 EMBL:BC002395 EMBL:BC011523 IPI:IPI00029764
PIR:A55749 RefSeq:NP_006793.1 UniGene:Hs.77897
ProteinModelPortal:Q12874 SMR:Q12874 DIP:DIP-882N IntAct:Q12874
MINT:MINT-1467744 STRING:Q12874 PhosphoSite:Q12874 DMDM:17380310
PaxDb:Q12874 PeptideAtlas:Q12874 PRIDE:Q12874 DNASU:10946
Ensembl:ENST00000373019 GeneID:10946 KEGG:hsa:10946 UCSC:uc001cci.3
CTD:10946 GeneCards:GC01M038422 HGNC:HGNC:10767 HPA:HPA032054
MIM:605596 neXtProt:NX_Q12874 PharmGKB:PA35685 HOVERGEN:HBG054452
InParanoid:Q12874 OMA:YITYLST OrthoDB:EOG42FSHC PhylomeDB:Q12874
ChiTaRS:SF3A3 EvolutionaryTrace:Q12874 GenomeRNAi:10946
NextBio:41589 ArrayExpress:Q12874 Bgee:Q12874 CleanEx:HS_SF3A3
Genevestigator:Q12874 GermOnline:ENSG00000183431 Uniprot:Q12874
Length = 501
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 229/517 (44%), Positives = 315/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ A+FE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQAEFEKKWENGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E T +NVQ
Sbjct: 293 LESLDTSLFAKNPKSK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRHLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|E2QXU5 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:AAEX03008727 EMBL:AAEX03009589
RefSeq:XP_532553.2 Ensembl:ENSCAFT00000001065
Ensembl:ENSCAFT00000005182 GeneID:475326 KEGG:cfa:475326
NextBio:20851179 Uniprot:E2QXU5
Length = 501
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 228/517 (44%), Positives = 314/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ +FE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQNEFEKKWENGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E T +NVQ
Sbjct: 293 LESLDTSLFAKNPKSK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRHLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|F1SV40 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0008270 GO:GO:0006397 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
CTD:10946 OMA:YITYLST EMBL:CR956649 RefSeq:XP_003127843.1
UniGene:Ssc.11044 Ensembl:ENSSSCT00000004039 GeneID:100512288
KEGG:ssc:100512288 Uniprot:F1SV40
Length = 501
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 228/517 (44%), Positives = 314/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ +FE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQNEFEKKWENGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E T +NVQ
Sbjct: 293 LESLDTSLFAKNPKSK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRHLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q3SWY7 [details] [associations]
symbol:SF3A3 "Splicing factor 3a, subunit 3" species:9913
"Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:DAAA02009167 EMBL:BC104596 EMBL:BT030554 IPI:IPI00686585
RefSeq:NP_001029720.1 UniGene:Bt.53270 SMR:Q3SWY7 STRING:Q3SWY7
Ensembl:ENSBTAT00000009603 GeneID:523250 KEGG:bta:523250
InParanoid:Q3SWY7 NextBio:20873695 Uniprot:Q3SWY7
Length = 501
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 228/517 (44%), Positives = 314/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
E P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL +F + +IP++
Sbjct: 117 RENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASEKLDYITYLSIFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PLQD + +F K+ +FE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQNELFGKIQNEFEKKWENGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G T+ N KDIA +EA++ + ++L E T +NVQ
Sbjct: 293 LESLDTSLFAKNPKTK---GTKRDTER--N-KDIAFLEAQIYEYVEILGEQRHLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>UNIPROTKB|Q5F387 [details] [associations]
symbol:SF3A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] InterPro:IPR000690 InterPro:IPR015880
PROSITE:PS50171 SMART:SM00355 GO:GO:0008270 GO:GO:0006397
GO:GO:0003676 GO:GO:0071013 eggNOG:COG5188
GeneTree:ENSGT00530000063402 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
CTD:10946 HOVERGEN:HBG054452 OMA:YITYLST OrthoDB:EOG42FSHC
EMBL:AADN02043911 EMBL:AJ851763 IPI:IPI00601517
RefSeq:XP_001232935.1 UniGene:Gga.2763 SMR:Q5F387 STRING:Q5F387
Ensembl:ENSGALT00000002340 GeneID:419608 KEGG:gga:419608
InParanoid:Q5F387 NextBio:20822639 Uniprot:Q5F387
Length = 501
Score = 1090 (388.8 bits), Expect = 2.3e-110, P = 2.3e-110
Identities = 225/517 (43%), Positives = 314/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + + L ++Y
Sbjct: 3 TILEQQRRYHEERERLMDVMVKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYD 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RK+E++A+ +G N F+ FY+RLK+I+E+HR+HP+ + V S ++E LLK
Sbjct: 63 DKDGLRKEELSAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVPMSVEFEELLKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
+ P LVEF+ EE YGRYLDLH+ Y +YIN K ++++Y YL F + +IP++
Sbjct: 117 RDNPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKSSEKLDYITYLSTFDQLFDIPKE 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y+ Y+E LLEYL + R +PL D + +F K+ +FE++W T GW E
Sbjct: 177 RK-NAEYKRYLEMLLEYLQEYTDRVKPLLDQNELFGKIQTEFEKKWENGTFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K G+ T+ N KD+A +EA++ + ++L E T +NVQ
Sbjct: 293 LEALDPSLFAKNPKTK---GIKRDTER--N-KDLAFLEAQIYEYVEVLGEQRHLTHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEEREEEEEEQISESESEDEENEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKL 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKASERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>ZFIN|ZDB-GENE-040908-1 [details] [associations]
symbol:sf3a3 "splicing factor 3a, subunit 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 ZFIN:ZDB-GENE-040908-1 GO:GO:0005634 GO:GO:0008270
GO:GO:0003676 GO:GO:0060218 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 CTD:10946
HOVERGEN:HBG054452 EMBL:AY648757 IPI:IPI00863550
RefSeq:NP_001004289.1 UniGene:Dr.79368 ProteinModelPortal:Q6DRK2
SMR:Q6DRK2 STRING:Q6DRK2 PRIDE:Q6DRK2 GeneID:446168 KEGG:dre:446168
InParanoid:Q6DRK2 NextBio:20832244 ArrayExpress:Q6DRK2 Bgee:Q6DRK2
Uniprot:Q6DRK2
Length = 501
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 223/517 (43%), Positives = 311/517 (60%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ + +D++ HRVR M+D + + L ++Y
Sbjct: 3 TILEQQRRYHEEKERLMDAKTKEMLTKKTTLRDQINSDHRVRAMLDRYMEVSANLRDLYE 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKD RKDE+ A+ +G N F+ FY+RLK I+E+HR+HP+ + V S ++E L+K
Sbjct: 63 DKDGMRKDELNAI-----SGPNEFAEFYNRLKLIKEFHRKHPN-EICVPMSVEFEELMKA 116
Query: 123 -EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
+ P LVEF+ EE YGRYLDLH+ Y +YIN K +++EY YL F + +I +
Sbjct: 117 KDNPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGVEKLEYVTYLSTFDQLFDISKD 176
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K +Y++Y+E LLEYL + R +PL D + ++ K++A+FE++W T GW E
Sbjct: 177 RK-NAEYKKYLEMLLEYLQEYTDRVKPLLDQNELYGKILAEFEKKWETGMFPGWPKETSS 235
Query: 236 N-GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTP 294
H A H LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 ALTHAGA-H--LDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKS 292
Query: 295 LDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQ 354
L+ LD FAK + K P N K+ A +EA++ + ++L E + + +NVQ
Sbjct: 293 LESLDPSLFAKNPKAK-----GPKKDSERN-KESAFLEAQIYEYVEILGEQRQLSHENVQ 346
Query: 355 KKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQ 414
+KQA IYNP LP+GWDGKPIPYWLYKLHGL
Sbjct: 347 RKQARTGEERDEEDEEQPSESESEDEDNEI--IYNPKNLPLGWDGKPIPYWLYKLHGLNI 404
Query: 415 EFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQE 474
+ CEICGNY+Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW K++
Sbjct: 405 NYNCEICGNYTYRGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKS 464
Query: 475 RQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
++ +W+P+ EEEYED GN+ NKKTY DL+RQGL+
Sbjct: 465 QKALERWQPDTEEEYEDSSGNVVNKKTYEDLKRQGLL 501
>FB|FBgn0014366 [details] [associations]
symbol:noi "noisette" species:7227 "Drosophila melanogaster"
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;ISS] [GO:0009566
"fertilization" evidence=IMP] [GO:0005686 "U2 snRNP" evidence=ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051533 "positive regulation of
NFAT protein import into nucleus" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355
EMBL:AE014297 GO:GO:0007067 GO:GO:0007052 GO:GO:0046872
GO:GO:0008270 GO:GO:0009566 GO:GO:0003676 GO:GO:0051533
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0005686
EMBL:AJ223042 EMBL:AY051676 RefSeq:NP_477114.1 UniGene:Dm.4519
ProteinModelPortal:O46106 SMR:O46106 DIP:DIP-19450N IntAct:O46106
MINT:MINT-279361 STRING:O46106 PaxDb:O46106 PRIDE:O46106
EnsemblMetazoa:FBtr0078751 GeneID:40678 KEGG:dme:Dmel_CG2925
UCSC:CG2925-RA CTD:40678 FlyBase:FBgn0014366 eggNOG:COG5188
GeneTree:ENSGT00530000063402 HOGENOM:HOG000102022 InParanoid:O46106
KO:K12827 OMA:ELYEDRD OrthoDB:EOG4QRFK9 PhylomeDB:O46106
GenomeRNAi:40678 NextBio:819998 Bgee:O46106 GermOnline:CG2925
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
Uniprot:O46106
Length = 503
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 215/515 (41%), Positives = 303/515 (58%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
TLLE R H + T+ K+R+ HR++ +++ ++T +L ++Y
Sbjct: 3 TLLEQQRRLHEERERLVKLMVDEHATKKPGEKERIHSEHRLKYLMELHHNSTSQLRDLYE 62
Query: 64 DKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLK- 122
DKDN RK EIAAL +G N F+ FY RLK+I+++++ HP A V+V S +++ +++
Sbjct: 63 DKDNERKAEIAAL-----SGPNEFNEFYARLKQIKQFYKSHP-AEVSVPLSVEFDEMIRV 116
Query: 123 -EEP-----LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKL 176
P LVEF+ EE GRYLDL+E Y Y+N + ++++Y YL F +IPR+
Sbjct: 117 YNNPDDMSALVEFTDEEGGGRYLDLNECYELYLNLRSVEKLDYITYLMSFDHVFDIPRER 176
Query: 177 KMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQEN 236
K R+YR YIE L +YL +F R +PL DL+ KV DF+ QW+ T G+ + E+
Sbjct: 177 K-NREYRIYIETLNDYLHHFILRIQPLLDLEGELLKVELDFQRQWLMGTFPGFSIKETES 235
Query: 237 GHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLD 296
+ + LDL +S+ EEL +G +RLK L A GLK GGTL++RA+RLF TK
Sbjct: 236 A-LANTGAHLDLSAFSSWEELASLGLDRLKSALVALGLKCGGTLEERAQRLFSTKGK--S 292
Query: 297 KLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKK 356
LD AK K + ++E K+IA +EA + K DLLSE T +NVQ+K
Sbjct: 293 TLDPALMAKKPSAKTASA---QSREHERHKEIAQLEALLYKYADLLSEQRAATKENVQRK 349
Query: 357 QALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEF 416
QA YNP LP+GWDGKPIPYWLYKLHGL +
Sbjct: 350 QARTGGERDDSDVEASESDNEDDPDADDVP-YNPKNLPLGWDGKPIPYWLYKLHGLNISY 408
Query: 417 KCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQ 476
CEICGN++Y G +AF+RHF EWRH HGMRCLGIPNT +F +T IE+A LW+K++ ++
Sbjct: 409 NCEICGNFTYKGPKAFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAITLWEKLKSQK 468
Query: 477 GGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
+W + EEE+ED GN+ N+KT+ DL+RQGL+
Sbjct: 469 QSERWVADQEEEFEDSLGNVVNRKTFEDLKRQGLL 503
>UNIPROTKB|E7EUT8 [details] [associations]
symbol:SF3A3 "Splicing factor 3A subunit 3" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0008270 GO:GO:0003676
EMBL:AL603790 InterPro:IPR024598 Pfam:PF11931 HGNC:HGNC:10767
ChiTaRS:SF3A3 IPI:IPI00908449 ProteinModelPortal:E7EUT8
PRIDE:E7EUT8 Ensembl:ENST00000448721 UCSC:uc010oik.2
ArrayExpress:E7EUT8 Bgee:E7EUT8 Uniprot:E7EUT8
Length = 448
Score = 948 (338.8 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 196/425 (46%), Positives = 259/425 (60%)
Query: 96 EIREYHRRHPSARVAVDASEDYENLLK--EEP------LVEFSGEEAYGRYLDLHELYNQ 147
+I HR + V S ++E LLK E P LVEF+ EE YGRYLDLH+ Y +
Sbjct: 36 QINSDHRTRAMQDICVPMSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLK 95
Query: 148 YINSKFGKEIEYSAYLDVFSRPHEIPRKLKMTRQYREYIEKLLEYLIYFFQRTEPLQDLD 207
YIN K ++++Y YL +F + +IP++ K +Y+ Y+E LLEYL + R +PLQD +
Sbjct: 96 YINLKASEKLDYITYLSIFDQLFDIPKERK-NAEYKRYLEMLLEYLQDYTDRVKPLQDQN 154
Query: 208 RIFSKVVADFEEQWVTSTLQGWETEGQEN-GHVPAQHSELDLDYYSTVEELMEVGSERLK 266
+F K+ A+FE++W T GW E H A H LDL +S+ EEL +G +RLK
Sbjct: 155 ELFGKIQAEFEKKWENGTFPGWPKETSSALTHAGA-H--LDLSAFSSWEELASLGLDRLK 211
Query: 267 EELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARGKEQNGVAPATQEVGNLK 326
L A GLK GGTL++RA+RLF TK L+ LD FAK + K G T+ N K
Sbjct: 212 SALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAKNPKSK---GTKRDTER--N-K 265
Query: 327 DIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQ 386
DIA +EA++ + ++L E T +NVQ+KQA
Sbjct: 266 DIAFLEAQIYEYVEILGEQRHLTHENVQRKQARTGEEREEEEEEQISESESEDEENEI-- 323
Query: 387 IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMR 446
IYNP LP+GWDGKPIPYWLYKLHGL + CEICGNY+Y G +AF+RHF EWRH HGMR
Sbjct: 324 IYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKAFQRHFAEWRHAHGMR 383
Query: 447 CLGIPNTKNFNEITSIEEAKELWKKIQERQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQ 506
CLGIPNT +F +T IE+A LW K++ ++ +W+P+ EEEYED GN+ NKKTY DL+
Sbjct: 384 CLGIPNTAHFANVTQIEDAVSLWAKLKLQKASERWQPDTEEEYEDSSGNVVNKKTYEDLK 443
Query: 507 RQGLI 511
RQGL+
Sbjct: 444 RQGLL 448
Score = 62 (26.9 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 4 TLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYA 63
T+LE R H K++ T+ ++ +D++ HR R M D + E+
Sbjct: 3 TILEQQRRYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDICVPMSVEFEELLK 62
Query: 64 DKDNARKD 71
++N ++
Sbjct: 63 ARENPSEE 70
>WB|WBGene00011758 [details] [associations]
symbol:T13H5.4 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 210/514 (40%), Positives = 291/514 (56%)
Query: 6 LEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYADK 65
LE R H K+ E ++K ++ RV+ +D + L + Y D+
Sbjct: 5 LETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDE 64
Query: 66 DNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHP---SARVAVDASEDYENLL- 121
D ++ E+ + +G N F+ FY RLK I++ HRR+P + + V+ + E ++
Sbjct: 65 DGSKSMEM-----DSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIIN 119
Query: 122 --KEEP-LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKL-K 177
+ EP +VEFS EEAYGR+LDLH Y+++IN K K ++Y YL F + EIP+ K
Sbjct: 120 PERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTK 179
Query: 178 MTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENG 237
T Y+EYI L +YL+ F QRT PL DLD +FS+V E + L GWE + +NG
Sbjct: 180 KTGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNG 239
Query: 238 HVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDK 297
P Q + +DL Y++ EEL +G ERLK L A GLK GGTL++RA+RLF TK L
Sbjct: 240 --P-QAAAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSD 296
Query: 298 LDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQ 357
L+K + E+ Q NL +A EA + L D+L+E T +NV++KQ
Sbjct: 297 LEKAAMSSNNSDAEK-------QNAKNLT-LAQTEAHIMALADILAEERTGTRENVERKQ 348
Query: 358 ALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFK 417
A YNP LP+GWDGKPIPYWLYKLHGL +
Sbjct: 349 ARSAGEVEEEEEEEIVIEEEEEIDESAP--YNPKNLPLGWDGKPIPYWLYKLHGLNLSYS 406
Query: 418 CEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQG 477
CEICGN +Y G +AF++HF EWRH HGMRCLGIPNT +F IT I++A +LW K++ +
Sbjct: 407 CEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKE 466
Query: 478 GIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
KW P+++EEYED GN+ +K Y DL+RQGL+
Sbjct: 467 MAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 500
>UNIPROTKB|Q22469 [details] [associations]
symbol:T13H5.4 "Protein T13H5.4" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000690 InterPro:IPR015880 PROSITE:PS50171
SMART:SM00355 GO:GO:0005634 GO:GO:0009792 GO:GO:0008406
GO:GO:0018996 GO:GO:0008270 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108
HOGENOM:HOG000160935 EMBL:Z66524 OMA:YITYLST PIR:A88238 PIR:T24901
RefSeq:NP_495799.1 ProteinModelPortal:Q22469 SMR:Q22469
DIP:DIP-25197N IntAct:Q22469 MINT:MINT-1067063 STRING:Q22469
PaxDb:Q22469 EnsemblMetazoa:T13H5.4 GeneID:174364
KEGG:cel:CELE_T13H5.4 UCSC:T13H5.4 CTD:174364 WormBase:T13H5.4
InParanoid:Q22469 NextBio:883718 Uniprot:Q22469
Length = 500
Score = 969 (346.2 bits), Expect = 1.5e-97, P = 1.5e-97
Identities = 210/514 (40%), Positives = 291/514 (56%)
Query: 6 LEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYADK 65
LE R H K+ E ++K ++ RV+ +D + L + Y D+
Sbjct: 5 LETIRNLHEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDE 64
Query: 66 DNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHP---SARVAVDASEDYENLL- 121
D ++ E+ + +G N F+ FY RLK I++ HRR+P + + V+ + E ++
Sbjct: 65 DGSKSMEM-----DSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIIN 119
Query: 122 --KEEP-LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKL-K 177
+ EP +VEFS EEAYGR+LDLH Y+++IN K K ++Y YL F + EIP+ K
Sbjct: 120 PERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNIKRVDYMTYLLNFEKFTEIPKNTTK 179
Query: 178 MTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENG 237
T Y+EYI L +YL+ F QRT PL DLD +FS+V E + L GWE + +NG
Sbjct: 180 KTGAYKEYINSLKDYLVSFMQRTRPLHDLDSVFSEVNQTVERAFKAGNLPGWEADKNKNG 239
Query: 238 HVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDK 297
P Q + +DL Y++ EEL +G ERLK L A GLK GGTL++RA+RLF TK L
Sbjct: 240 --P-QAAAVDLSPYNSAEELEGLGLERLKGALMAIGLKCGGTLKERADRLFATKGHKLSD 296
Query: 298 LDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQ 357
L+K + E+ Q NL +A EA + L D+L+E T +NV++KQ
Sbjct: 297 LEKAAMSSNNSDAEK-------QNAKNLT-LAQTEAHIMALADILAEERTGTRENVERKQ 348
Query: 358 ALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFK 417
A YNP LP+GWDGKPIPYWLYKLHGL +
Sbjct: 349 ARSAGEVEEEEEEEIVIEEEEEIDESAP--YNPKNLPLGWDGKPIPYWLYKLHGLNLSYS 406
Query: 418 CEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQG 477
CEICGN +Y G +AF++HF EWRH HGMRCLGIPNT +F IT I++A +LW K++ +
Sbjct: 407 CEICGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKE 466
Query: 478 GIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
KW P+++EEYED GN+ +K Y DL+RQGL+
Sbjct: 467 MAKWNPDIDEEYEDSSGNVVTRKMYEDLKRQGLL 500
>DICTYBASE|DDB_G0270020 [details] [associations]
symbol:sf3a3 "splicing factor 3A subunit 3"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] [GO:0000389 "mRNA 3'-splice site
recognition" evidence=ISS] InterPro:IPR003604 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 SMART:SM00451
dictyBase:DDB_G0270020 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 GO:GO:0000389
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 RefSeq:XP_646474.1 STRING:Q55CK7
EnsemblProtists:DDB0229922 GeneID:8617435 KEGG:ddi:DDB_G0270020
InParanoid:Q55CK7 OMA:CEICSDH Uniprot:Q55CK7
Length = 544
Score = 404 (147.3 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 80/195 (41%), Positives = 118/195 (60%)
Query: 326 KDIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXX 385
KD + E K+ +L + LS+ IE T +NV KKQ+
Sbjct: 340 KDNTMFEYKINRLSEYLSDQIESTKENVLKKQSRSYTEVVDGVMVGGVGDDEEEDEEVNI 399
Query: 386 ---QI---YNPLKL---PMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHF 436
++ + LK+ P+ W GKPIPYW+Y+ LG E+KCEICGN SYWGR+A+E+HF
Sbjct: 400 DDLEVDVEVSKLKIANYPVDWSGKPIPYWVYRYLELGVEYKCEICGNQSYWGRKAYEKHF 459
Query: 437 KEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIKWRPELEEEYEDKEGNI 496
+E RH +GM +G+PNT +F+EIT I++A ELW KI+ + +++ + +EEYED+ GN+
Sbjct: 460 QETRHSYGMSSIGVPNTTHFHEITKIKDALELWSKIKNQTNQQQFKSDRDEEYEDETGNV 519
Query: 497 YNKKTYTDLQRQGLI 511
+KK Y L +QG+I
Sbjct: 520 MSKKNYDLLVKQGII 534
Score = 391 (142.7 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 82/243 (33%), Positives = 144/243 (59%)
Query: 1 MSSTLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIE 60
MSS+LLE TR H +++TEP + K+R++QSHRV + +++ + ++ LI
Sbjct: 1 MSSSLLEKTRNLHENFERYELLIENEMKTEPKTTKERVLQSHRVNHYLNSSIECSKSLIN 60
Query: 61 IYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENL 120
IY D D++RKDE+ ++ G GT+++SSFY++L+EI++YHR+ P+ + + E L
Sbjct: 61 IYTDSDHSRKDELTSISG---FGTDLYSSFYEKLREIKDYHRKFPNLK----EERNNEPL 113
Query: 121 LKEEPLVEFSGEEAYGRYLDLHELYNQYINSKFGKE----IEYSAYLDVFSR-PHEIPRK 175
+ P + F+G E G++LDL+E Y +YIN F + ++Y YL + + + +
Sbjct: 114 IFT-PSISFTGNEMNGKFLDLNENYEKYINLSFNRNKSINLDYLTYLTSYYKFQYNDINR 172
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
+K + QY++Y+E + +YLI+F +RT+PL +L +K +F E+W + E
Sbjct: 173 MK-SPQYKDYLESVYKYLIHFIERTQPLFELQSSITKSENEFIEKWNNNEFDPIENNNNN 231
Query: 236 NGH 238
N +
Sbjct: 232 NNN 234
>ASPGD|ASPL0000009101 [details] [associations]
symbol:AN8015 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 SMART:SM00355 GO:GO:0008270
GO:GO:0005622 EMBL:BN001302 InterPro:IPR022755 Pfam:PF12171
EMBL:AACD01000139 eggNOG:COG5188 KO:K12827 InterPro:IPR024598
InterPro:IPR021966 Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935
OrthoDB:EOG43V34M OMA:YITYLST RefSeq:XP_681284.1
ProteinModelPortal:Q5AUL5 STRING:Q5AUL5
EnsemblFungi:CADANIAT00004035 GeneID:2868930 KEGG:ani:AN8015.2
Uniprot:Q5AUL5
Length = 502
Score = 712 (255.7 bits), Expect = 2.6e-70, P = 2.6e-70
Identities = 176/522 (33%), Positives = 270/522 (51%)
Query: 5 LLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYAD 64
LLE R H + EP + ++RL + H + + ++ I D + RL++IY +
Sbjct: 2 LLEDQRFIHEDLERLEQAIADRVAEEPRNIRERLARDHEIAHFLNRIDDQSRRLLDIYKN 61
Query: 65 KDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLL--K 122
+ R+ EI A+ +TG F FY RL E++++H+R+P+ V + Y+ +
Sbjct: 62 AEGEREKEIQAI----STGDQ-FEEFYKRLDELKDFHKRYPNEPVE-NLERAYKRRQPGE 115
Query: 123 EEPL---VE--FSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSR--PHEIP-- 173
EP V+ F+GEE YG++LDL L+ QY+N K + Y YLD+F P ++P
Sbjct: 116 GEPTGLEVDTMFTGEEGYGQFLDLTTLHEQYLNLPGVKRLSYIQYLDIFDAFTPPKLPIK 175
Query: 174 RKLKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEG 233
R K++ +Y +Y+ +L YL F ++ PLQDL +IF+ DFE+QW + + GWE E
Sbjct: 176 RNNKLSDKYFQYVGELANYLEEFIKKARPLQDLSKIFASFDEDFEKQWAANEVPGWEEEK 235
Query: 234 QENGHV-PAQHSELDLDYYSTVEELMEVGSERL-KEELAAKGLKSGGTLQQRAERLFLTK 291
NG P + + + E+ E +E + + L K ++ A +
Sbjct: 236 INNGTAGPKTEGSGEGIWCADCEK--EFKNENVYRNHLTGKKHIRAAEARKAAGG---SG 290
Query: 292 HTPLDKLDKKHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQ 351
P A R KE+ VA V +L + + E + K+ +ER
Sbjct: 291 EGPTPSASGPSAAH--RLKER-AVAEREHRVRSLARVLINERQATKI------NVERRQG 341
Query: 352 NVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHG 411
++++ + +IYNPLKLP+ WDGKPIPYWLYKLHG
Sbjct: 342 MTERERQMELEAMLAETEDAKGDRGNESDEEGEDRIYNPLKLPLAWDGKPIPYWLYKLHG 401
Query: 412 LGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIP-NTKNFNEITSIEEAKELWK 470
LG E+ CEICGNY Y GRRAF++HF E H G++CLGI NT F EIT I++A LW+
Sbjct: 402 LGVEYSCEICGNYVYMGRRAFDKHFSEALHIFGLKCLGITSNTNLFREITKIDDAIRLWE 461
Query: 471 KI-QERQGGIKWRPELEEEYEDKEGNIYNKKTYTDLQRQGLI 511
K+ Q+R+ +R + + ED EGN+ ++ Y DLQ+QG++
Sbjct: 462 KLEQDRKKERDFRDNVVQ-MEDAEGNVMPERIYLDLQKQGIL 502
>POMBASE|SPBC36.09 [details] [associations]
symbol:sap61 "U2 snRNP-associated protein sap61"
species:4896 "Schizosaccharomyces pombe" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0005686 "U2 snRNP"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045292 "mRNA cis splicing, via
spliceosome" evidence=ISS] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50171 SMART:SM00355 SMART:SM00451
PomBase:SPBC36.09 GO:GO:0005829 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003723
InterPro:IPR022755 Pfam:PF12171 GO:GO:0005686 GO:GO:0045292
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 InterPro:IPR021966
Pfam:PF11931 Pfam:PF12108 HOGENOM:HOG000160935 OrthoDB:EOG43V34M
PIR:T40304 RefSeq:NP_595337.1 ProteinModelPortal:O59706
IntAct:O59706 STRING:O59706 EnsemblFungi:SPBC36.09.1 GeneID:2540932
KEGG:spo:SPBC36.09 OMA:FVYMGRR NextBio:20802047 Uniprot:O59706
Length = 492
Score = 417 (151.9 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 86/200 (43%), Positives = 116/200 (58%)
Query: 326 KDIALMEAKMKKLCDLLSETIERTIQNVQKKQALXXXXXXXXXXXXXXXXXXXXXXXXXX 385
K IA +E +KKL LL + + T +NV ++Q L
Sbjct: 293 KAIARIEFLIKKLTSLLDDVRKDTRENVVRRQTLTAAERLAEVEAAEREAFEQSTPSVSV 352
Query: 386 Q--------------IYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRA 431
+ IYNPLKLP+GWDGKPIP+WL+KLHGLG+EF CEICGNY Y GR+A
Sbjct: 353 EGNQDEESDQDDEEKIYNPLKLPLGWDGKPIPFWLWKLHGLGKEFPCEICGNYVYMGRKA 412
Query: 432 FERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIKWRPELEEEYED 491
F++HF E RH +G++CLGI + FN+ITSI+EA +LW+K + + E ED
Sbjct: 413 FDKHFTEQRHIYGLKCLGISPSPLFNQITSIDEALQLWQKYKVDSKKRETTMASLNEMED 472
Query: 492 KEGNIYNKKTYTDLQRQGLI 511
EGN+ ++K Y DL+ QGL+
Sbjct: 473 DEGNVMSEKVYNDLKAQGLL 492
Score = 296 (109.3 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 71/240 (29%), Positives = 119/240 (49%)
Query: 1 MSSTLLEVTRAAHXXXXXXXXXXXKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIE 60
MS ++LE R AH P + ++RL H+ ++ +T+++L+
Sbjct: 1 MSESVLETERYAHEELERLQQAIVDRQVANPKAPRERLRLEHQSAQFLNQFRETSKKLLV 60
Query: 61 IYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENL 120
+ D + E+A + + + FY L EI+E+H+++P +V D S+ Y ++
Sbjct: 61 SHESSDRLKDQEVARINAD-----DDLTEFYKSLGEIQEFHKKYPDHKVE-DLSQLY-SI 113
Query: 121 LKEEPLVE-----FSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRK 175
+P ++ F GEE YGR++DL+E Y +YIN + I Y YL +IP+
Sbjct: 114 KPSQPGIDEIDTLFRGEEMYGRFMDLNECYEEYINLSNVQHISYLEYLKNLEDFDQIPKP 173
Query: 176 LKMTRQYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE 235
K + Y YI L EYL+ F++RT PL +LD+I + +F+ W L GW + E
Sbjct: 174 EK-NQTYINYITHLYEYLVSFYRRTHPLSNLDKIIAVFDTEFDAAWEAG-LPGWYSHNAE 231
>UNIPROTKB|G4N2Q7 [details] [associations]
symbol:MGG_12972 "Splicing factor 3a subunit 3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000690
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50171 SMART:SM00355 GO:GO:0005634 EMBL:CM001233
GO:GO:0008270 GO:GO:0003676 InterPro:IPR022755 Pfam:PF12171
KO:K12827 InterPro:IPR024598 InterPro:IPR021966 Pfam:PF11931
Pfam:PF12108 RefSeq:XP_003712369.1 ProteinModelPortal:G4N2Q7
EnsemblFungi:MGG_12972T0 GeneID:2675386 KEGG:mgr:MGG_12972
Uniprot:G4N2Q7
Length = 521
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 173/504 (34%), Positives = 255/504 (50%)
Query: 30 EPNSNKDRLVQSHRVRNMIDTITDTTERLIEIYADKDNARKDEIAALGGQTATGTNVFSS 89
EP +DRL + H V +++ I + LI +Y D + R EI A+G +G + F
Sbjct: 27 EPTFIRDRLNRDHEVAQLLEQIQKQSSELISMYEDVNGLRSKEIQAIG----SG-DPFDE 81
Query: 90 FYDRLKEIREYHRRHPSARVAVDASEDY----ENLLKEEP-LVE--FSGEEAYGRYLDLH 142
FY +++EI+E+H ++P+ + A + Y + +P +V+ FSGEEA+G++ DL
Sbjct: 82 FYKQVEEIKEHHAKYPTEQ-AENPELRYRPGRDGPDPAQPYMVDMIFSGEEAFGKFFDLL 140
Query: 143 ELYNQYINSKFGKEIEYSAYLDVFS--RPHE--IPRKLKMTRQYREYIEKLLEYLIYFFQ 198
+ YIN K Y YL+VF P + R K+T QY +Y+ L EYL F +
Sbjct: 141 AAHEAYINLPNVKHRSYLQYLEVFDDFAPGAGGVKRADKLTDQYFKYVGDLAEYLESFMR 200
Query: 199 RTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQE-NGHVPAQHSELDLDYYSTVEEL 257
R PL++LD++F+ ADFE+ W + W E E NG P S + + E+
Sbjct: 201 RARPLENLDKLFATFAADFEKLWEKDEVPHWGAEKPEANGSAPHATSTAEAVWCDACEK- 259
Query: 258 MEVGSERL-KEELAA-KGLKSGGTLQQRAERLF-LTKHTPLDKLDKKHFAKGARGKEQNG 314
E +E + K L K +K+ +R E ++ D K R KE+
Sbjct: 260 -EFKNENVYKNHLTGRKHIKAAEQKAKRTEENDDASEAASTDAPTKGKKESAIRLKER-A 317
Query: 315 VAPATQEVGNLKDIALME-----AKMKKLCDLLSETIERTIQNVQK--KQALXXXXXXXX 367
VA V L + E +++ + ++ ++N+ A+
Sbjct: 318 VAEREYRVTRLTEAMKTERDETKVNVERRQGMTERERQQELENLYNIMGSAITTYGAGGA 377
Query: 368 XXXXXXXXXXXXXXXXXXQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYW 427
+IYNPLKLP+ WDGKPIP+WLY+LHGLG EF CEICGN+ Y
Sbjct: 378 NGHQGGEGDEDEGEDGEEKIYNPLKLPLAWDGKPIPFWLYRLHGLGVEFPCEICGNFVYM 437
Query: 428 GRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIKWRPELEE 487
GRRA+E+HF E RH +G++CLGI NT F +I SIEEA +LW KIQ +
Sbjct: 438 GRRAYEKHFNEARHIYGLKCLGISNTSLFRDIISIEEALKLWDKIQRDRKRNMGDDGSVV 497
Query: 488 EYEDKEGNIYNKKTYTDLQRQGLI 511
+ ED EGN+ +K Y DLQ+QGL+
Sbjct: 498 QMEDAEGNVMPEKVYYDLQKQGLL 521
>SGD|S000002188 [details] [associations]
symbol:PRP9 "Subunit of the SF3a splicing factor complex"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA] [GO:0071004 "U2-type prespliceosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IDA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005686 "U2 snRNP" evidence=TAS]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS50171 SMART:SM00355
SMART:SM00451 SGD:S000002188 GO:GO:0046872 GO:GO:0008270
EMBL:BK006938 GO:GO:0003723 GO:GO:0000398 EMBL:Z71781
InterPro:IPR022755 Pfam:PF12171 GO:GO:0005686 GO:GO:0071004
eggNOG:COG5188 GeneTree:ENSGT00530000063402 KO:K12827
InterPro:IPR024598 Pfam:PF11931 PDB:4DGW PDBsum:4DGW EMBL:X53466
EMBL:Z74078 PIR:S12320 RefSeq:NP_010254.1 ProteinModelPortal:P19736
SMR:P19736 DIP:DIP-651N IntAct:P19736 MINT:MINT-506158
STRING:P19736 PaxDb:P19736 PeptideAtlas:P19736 EnsemblFungi:YDL030W
GeneID:851531 KEGG:sce:YDL030W CYGD:YDL030w HOGENOM:HOG000160935
OMA:EICGNTT OrthoDB:EOG43V34M NextBio:968923 Genevestigator:P19736
GermOnline:YDL030W Uniprot:P19736
Length = 530
Score = 331 (121.6 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 66/133 (49%), Positives = 88/133 (66%)
Query: 393 LPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIPN 452
+P+G DG P+PYWLYKLHGL +E++CEIC N Y GRR FERHF E RH + +RCLGI
Sbjct: 398 MPLGPDGLPMPYWLYKLHGLDREYRCEICSNKVYNGRRTFERHFNEERHIYHLRCLGIEP 457
Query: 453 TKNFNEITSIEEAKELWKKIQERQ-----GGIKWRP---------ELEEEYEDKEGNIYN 498
+ F IT I+EA+ELWK +Q + + +P ELE E ED+EGN+ +
Sbjct: 458 SSVFKGITKIKEAQELWKNMQGQSQLTSIAAVPPKPNPSQLKVPTELELEEEDEEGNVMS 517
Query: 499 KKTYTDLQRQGLI 511
KK Y +L++QGL+
Sbjct: 518 KKVYDELKKQGLV 530
Score = 90 (36.7 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 27/111 (24%), Positives = 57/111 (51%)
Query: 129 FSGEEAYGRYLDLHELYNQYINS-KFG--KEIEYSAYLDVFSRPHEIPRKLKMTRQ---Y 182
F+ +E YG Y++L + ++ ++N K G +++ L++F + M R+ Y
Sbjct: 170 FTRDEQYGEYMELEQFHSLWLNVIKRGDCSLLQFLDILELFLDDEKYLLTPPMDRKNDRY 229
Query: 183 REYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEG 233
++ KL +Y+ FF ++ L D + + + +DFE + +L+ E +G
Sbjct: 230 MAFLLKLSKYVETFFFKSYALLDAAAVENLIKSDFEHSYCRGSLRS-EAKG 279
Score = 37 (18.1 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 18/92 (19%), Positives = 38/92 (41%)
Query: 100 YHRRHPSARVAVDASEDYENLLKEEPLVEFSGEEAYGRYLDL--HELYNQYINSKFGKEI 157
YH S++V D +L+ E + +F + + + L HE+ N ++ K+
Sbjct: 33 YHYIQESSKVFPDTKLPRSSLIAENKIYKFKKVKRKRKQIILQQHEI-NIFLRDYQEKQQ 91
Query: 158 EYSAYLDVFSRPHEIPRKLKMTRQYREYIEKL 189
++ +RP E K + +++L
Sbjct: 92 TFNK----INRPEETQEDDKDLPNFERKLQQL 119
>CGD|CAL0002401 [details] [associations]
symbol:orf19.3178 species:5476 "Candida albicans" [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR007087 InterPro:IPR015880 PROSITE:PS00028
PROSITE:PS50171 SMART:SM00355 SMART:SM00451 CGD:CAL0002401
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
EMBL:AACQ01000100 EMBL:AACQ01000097 InterPro:IPR022755 Pfam:PF12171
eggNOG:COG5188 KO:K12827 InterPro:IPR024598 Pfam:PF11931
RefSeq:XP_714596.1 RefSeq:XP_714727.1 STRING:Q59YK2 GeneID:3643618
GeneID:3643741 KEGG:cal:CaO19.10688 KEGG:cal:CaO19.3178
Uniprot:Q59YK2
Length = 513
Score = 317 (116.6 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 393 LPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSYWGRRAFERHFKEWRHQHGMRCLGIP- 451
LP+G DG PIP+WLYKL L +++ CEICGN SY G+ F +HF +HQ+G++CLG+
Sbjct: 393 LPLGPDGTPIPFWLYKLQELHKQYNCEICGNISYKGKSVFMKHFSGSKHQYGLKCLGVDE 452
Query: 452 -NTKNFNEITSIEEAKELWKKIQERQGGIKWRPELEE--EYEDKEGNIYNKKTYTDLQRQ 508
N K F IT I+EA ELWK ++ ++ +K ELE E EDKEGN+ +K Y DL++Q
Sbjct: 453 KNMKMFKNITKIDEATELWKVLR-KETKLKVT-ELENSVEVEDKEGNVMLEKDYIDLKKQ 510
Query: 509 GLI 511
GL+
Sbjct: 511 GLL 513
Score = 68 (29.0 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 139 LDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKLKMTRQYREYIEKLLEYLIYFFQ 198
LDLH ++ Y+ S FG I Y YL FS P + Y +Y+ +L +L
Sbjct: 180 LDLHHFHDLYV-SNFGP-ISYIEYLYKFS---SFPYT-NVNGFYSKYLTELSRFLEATLL 233
Query: 199 RTEPLQDLDRIFSKVVADFE 218
+ +PL D + + +++
Sbjct: 234 KLQPLLDYNALLQNWKKEYD 253
Score = 59 (25.8 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 41/171 (23%), Positives = 71/171 (41%)
Query: 84 TNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENLLKE-EPLVEFSGEEAYGRYLDLH 142
TNV + FY K + E R + + + DY LL+ + + + EE D
Sbjct: 211 TNV-NGFYS--KYLTELSRFLEATLLKLQPLLDYNALLQNWKKEYDNANEERKSNGNDGD 267
Query: 143 ELYNQYINSKFGKEIEYSAYLDVFSRPH------EIPRKLKMTRQYREY-IEKLLEYLI- 194
+L+ + N F KE Y ++L + H + P + + EY IEKL + L
Sbjct: 268 KLFCKACNKLFSKETVYQSHLS--GKKHKKNASQQNPDNFVSSLPWLEYFIEKLCQVLAP 325
Query: 195 ---YFFQRTEPLQDLD----RIFSKVVADFEEQWVTSTLQGWETEGQENGH 238
Y + E L +L ++ +V D E ++V + + + +N H
Sbjct: 326 ELEYTRAQVEKLSNLSERELQLDRQVQHDIENEFVAINNEFDDDDLSQNEH 376
Score = 44 (20.5 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 12/47 (25%), Positives = 22/47 (46%)
Query: 309 GKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQK 355
GK+ A + + +E ++KLC +L+ +E T V+K
Sbjct: 290 GKKHKKNASQQNPDNFVSSLPWLEYFIEKLCQVLAPELEYTRAQVEK 336
Score = 43 (20.2 bits), Expect = 6.2e-29, Sum P(3) = 6.2e-29
Identities = 25/118 (21%), Positives = 55/118 (46%)
Query: 118 ENLLKEEPLVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSR--PH----E 171
+N++ E+P +S + + L+ ++ + IN K GKE E+ S H E
Sbjct: 118 DNIV-EDPRKLYSSFSSLNKELNPQDVTLK-INKKTGKEQEFVKRKHFLSSIASHLKNIE 175
Query: 172 IPRKLKMTRQYREYIEKL--LEYLIYFFQRTE-PLQDLDRIFSKVVADFEEQWVTSTL 226
I L + + Y+ + Y+ Y ++ + P +++ +SK + + +++ +TL
Sbjct: 176 INDILDLHHFHDLYVSNFGPISYIEYLYKFSSFPYTNVNGFYSKYLTELS-RFLEATL 232
>RGD|1308726 [details] [associations]
symbol:Sf3a3 "splicing factor 3a, subunit 3" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308726
InterPro:IPR021966 Pfam:PF12108 UniGene:Rn.16732 EMBL:AY387079
IPI:IPI00421321 SMR:Q6TUF1 STRING:Q6TUF1 Ensembl:ENSRNOT00000040564
UCSC:RGD:1308726 HOVERGEN:HBG063336 Genevestigator:Q6TUF1
Uniprot:Q6TUF1
Length = 230
Score = 233 (87.1 bits), Expect = 7.1e-19, P = 7.1e-19
Identities = 53/124 (42%), Positives = 76/124 (61%)
Query: 53 DTTERLIEIYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVD 112
+ + L ++Y DKD RK+E+ A+ +G N F+ FY+RLK+I+E+HR+HP+ + V
Sbjct: 36 EVSGNLRDLYDDKDGLRKEELNAI-----SGPNEFAEFYNRLKQIKEFHRKHPN-EICVP 89
Query: 113 ASEDYENLLK--EEP------LVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLD 164
S ++E LLK E P LVEF+ EE YGRYLDLH+ Y +YIN K + +L
Sbjct: 90 MSVEFEELLKARENPSEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKASESFP-GIFLA 148
Query: 165 VFSR 168
F R
Sbjct: 149 CFKR 152
>TAIR|locus:2125201 [details] [associations]
symbol:AT4G01000 "AT4G01000" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000626 Pfam:PF00240
SMART:SM00213 EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q862M4
EMBL:AL161491 EMBL:AL080237 OMA:KRKCFWM eggNOG:NOG248374
EMBL:AY057615 EMBL:BT015779 IPI:IPI00521232 PIR:T10540
RefSeq:NP_192009.1 UniGene:At.24461 ProteinModelPortal:Q9SV28
SMR:Q9SV28 PaxDb:Q9SV28 PRIDE:Q9SV28 EnsemblPlants:AT4G01000.1
GeneID:826414 KEGG:ath:AT4G01000 TAIR:At4g01000
HOGENOM:HOG000238175 InParanoid:Q9SV28 PhylomeDB:Q9SV28
ProtClustDB:CLSN2685459 ArrayExpress:Q9SV28 Genevestigator:Q9SV28
Uniprot:Q9SV28
Length = 415
Score = 159 (61.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 246 LDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAK 305
L+ D +++ ++ +G ERLK EL ++GLK GGTL++RA RLFL K TPLDKL KK AK
Sbjct: 355 LNFDDFNSPADMEVLGMERLKTELQSRGLKCGGTLRERAARLFLLKSTPLDKLPKKLLAK 414
>ZFIN|ZDB-GENE-050417-270 [details] [associations]
symbol:zgc:112095 "zgc:112095" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-050417-270 GeneTree:ENSGT00530000063402
InterPro:IPR024974 Pfam:PF13019 EMBL:BX649315 IPI:IPI00508258
Ensembl:ENSDART00000043774 ArrayExpress:F1R058 Uniprot:F1R058
Length = 487
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/117 (35%), Positives = 66/117 (56%)
Query: 198 QRTEPL-QDLDRIFSKVVADFEEQWVTSTLQGWETEGQENGHVPAQHSE-LDLDYYSTVE 255
+R E + +++ + +V EE T+ + + +E V +Q + LDL S E
Sbjct: 373 ERVEKMAEEVQKTAEEVQKKTEES--TAEISPSSSIPEEKSQVLSQVEDPLDLLSVSGPE 430
Query: 256 ELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDKKHFAKGARGKEQ 312
+L +G ERLK+EL +G+K GGTLQ+RA RLF K D++D AK ++GK++
Sbjct: 431 QLEALGLERLKKELMERGMKCGGTLQERAARLFSVKGLTPDQIDPSLLAKPSKGKKK 487
>MGI|MGI:2384788 [details] [associations]
symbol:Sde2 "SDE2 telomere maintenance homolog (S. pombe)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:2384788
GeneTree:ENSGT00530000063402 EMBL:BC031781 EMBL:AK078485
IPI:IPI00169771 RefSeq:NP_666055.1 UniGene:Mm.272625
ProteinModelPortal:Q8K1J5 IntAct:Q8K1J5 PhosphoSite:Q8K1J5
PRIDE:Q8K1J5 Ensembl:ENSMUST00000038091 GeneID:208768
KEGG:mmu:208768 UCSC:uc007dwt.1 CTD:163859 eggNOG:NOG292496
HOGENOM:HOG000013081 HOVERGEN:HBG107551 InParanoid:Q8K1J5
OMA:KRKCFWM OrthoDB:EOG4QJRNT NextBio:372411 Bgee:Q8K1J5
CleanEx:MM_BC031781 Genevestigator:Q8K1J5 InterPro:IPR024974
Pfam:PF13019 Uniprot:Q8K1J5
Length = 448
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/81 (41%), Positives = 47/81 (58%)
Query: 232 EGQENGHVPAQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTK 291
EG +G +DL +S+ EL +G ERLK EL GLK GGTLQ+RA RLF +
Sbjct: 368 EGNNSGDTALGLEAVDLSAFSSAAELESLGLERLKCELMVLGLKCGGTLQERAARLFSVR 427
Query: 292 HTPLDKLDKKHFAKGARGKEQ 312
+ +D FAK ++GK++
Sbjct: 428 GLTKELIDPALFAKPSKGKKK 448
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 511 474 0.0010 118 3 11 22 0.44 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 622 (66 KB)
Total size of DFA: 305 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.87u 0.14s 48.01t Elapsed: 00:00:02
Total cpu time: 47.87u 0.14s 48.01t Elapsed: 00:00:02
Start: Fri May 10 03:46:32 2013 End: Fri May 10 03:46:34 2013