Query 010424
Match_columns 511
No_of_seqs 85 out of 115
Neff 2.7
Searched_HMMs 29240
Date Mon Mar 25 06:30:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010424.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010424hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v7w_A Chitobiose phosphorylas 99.4 9.4E-13 3.2E-17 138.5 11.0 186 228-431 345-549 (807)
2 3rrs_A Cellobiose phosphorylas 99.0 2.6E-09 8.9E-14 115.8 13.8 164 231-429 367-564 (822)
3 3qde_A Cellobiose phosphorylas 99.0 1.7E-09 6E-14 116.7 11.5 164 231-429 360-557 (811)
4 2okx_A Rhamnosidase B; alpha b 98.4 8E-07 2.7E-11 96.8 11.9 167 225-432 572-744 (956)
5 1ulv_A Glucodextranase; GH fam 98.3 3.5E-06 1.2E-10 93.8 12.6 175 208-431 302-484 (1020)
6 3c68_A Uncharacterized protein 98.3 7.6E-06 2.6E-10 88.3 14.1 190 224-432 317-600 (761)
7 3cih_A Putative alpha-rhamnosi 98.2 1.5E-06 5.3E-11 91.9 7.5 187 186-431 307-501 (739)
8 1lf6_A Glucoamylase; (alpha/al 97.9 3.1E-05 1.1E-09 81.9 10.8 157 223-431 335-492 (684)
9 2z07_A Putative uncharacterize 97.9 0.00012 4E-09 71.6 13.6 133 188-351 3-145 (420)
10 2jg0_A Periplasmic trehalase; 97.2 0.0036 1.2E-07 65.0 13.2 167 223-431 121-352 (535)
11 3qry_B Putative uncharacterize 96.7 0.0094 3.2E-07 61.8 11.1 221 201-448 40-294 (426)
12 3p2c_A Putative glycosyl hydro 96.3 0.012 4E-07 61.7 9.2 215 206-448 74-322 (463)
13 3qt9_A Putative uncharacterize 96.0 0.012 4.1E-07 61.1 7.4 218 202-448 44-294 (427)
14 2p0v_A Hypothetical protein BT 95.9 0.022 7.4E-07 60.1 8.8 223 202-448 88-340 (489)
15 2fba_A Glucoamylase Glu1; (alp 95.6 0.065 2.2E-06 55.5 10.9 187 205-430 45-266 (492)
16 2vn4_A Glucoamylase; hydrolase 95.1 0.077 2.6E-06 56.2 10.0 182 205-430 29-229 (599)
17 1gai_A Glucoamylase-471; hydro 94.5 0.25 8.5E-06 51.2 11.8 179 206-429 31-227 (472)
18 2rdy_A BH0842 protein; PSI-II, 36.8 1.2E+02 0.0042 33.1 9.4 83 318-402 452-542 (803)
No 1
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.38 E-value=9.4e-13 Score=138.50 Aligned_cols=186 Identities=14% Similarity=0.119 Sum_probs=122.4
Q ss_pred eee-ccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCC-cccccEEEeeecCCCCCCC-ceeeeccCcCC
Q 010424 228 VFI-RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRTVPLDGGDGT-LEEVLDPDFGE 304 (511)
Q Consensus 228 VFi-RDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~G-vmPASFKV~~~p~~~~~~~-~eE~L~ADFGe 304 (511)
-|. ||....+++++ .|++|++|++|..+...|.. .| ++|..|...++|..+.... ...+++.+.|+
T Consensus 345 ~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~----------~G~~~p~~~p~~~~~~~g~~~~~~~~~~~g~~~~ 413 (807)
T 1v7w_A 345 GLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVK----------AGYGLHLFDPDWFDPEKEDVAPSKSPTVVPTPSD 413 (807)
T ss_dssp SEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCT----------TSCBCSEECGGGGCC-------------------
T ss_pred ccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhcccc----------CCCcceeeeeccccccccccCCccccccccCCCc
Confidence 466 99999999976 99999999999998876643 33 4555441111110000000 00122333444
Q ss_pred cc--cc-cccccCCccHHHHHHHHHhhcccccccccc--h-----------hHHHHHHHHHHhhhcCCCCCCceeeecCC
Q 010424 305 SA--IG-RVAPVDSGLWWIILLRAYGKITGDYALQER--V-----------DVQTGIRLILNLCLTDGFDMFPSLLVTDG 368 (511)
Q Consensus 305 ~A--IG-RVapVDSgLWWiILLraY~k~TGD~sl~~~--p-----------~vQrGIrlIL~LcL~~~Fd~fPtLlVpDG 368 (511)
.+ +| +..-.|..+||+++++.|.+.|||.++.+. | .++++++.+++.+-. +..|.....|=
T Consensus 414 ~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~---~GL~~~~~~DW 490 (807)
T 1v7w_A 414 EDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQ---TGICKGLRADW 490 (807)
T ss_dssp ---CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCT---TSCBEEETCSS
T ss_pred chhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCC---CCCcccCCCCC
Confidence 33 33 223349999999999999999999999873 4 399999988875433 45554433221
Q ss_pred cccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhccccc
Q 010424 369 SCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431 (511)
Q Consensus 369 s~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD 431 (511)
..-.| +| .|.++++|+++|.||+++.+|.+.-.+ .+..+...++...|+..|+++||-+
T Consensus 491 ~D~~~--~~-~g~~v~~~a~~y~al~~~a~la~~lG~-~~~a~~~~~~A~~lk~~~~~~~w~~ 549 (807)
T 1v7w_A 491 NDCLN--LG-GGESSMVSFLHFWALQEFIDLAKFLGK-DQDVNTYTEMAANVREACETHLWDD 549 (807)
T ss_dssp STTCC--CE-EEEEHHHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHHHHHSEET
T ss_pred CCcCC--CC-CCeehhHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHhccCC
Confidence 11023 35 899999999999999999999987433 5556777888888999999999975
No 2
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=98.99 E-value=2.6e-09 Score=115.78 Aligned_cols=164 Identities=18% Similarity=0.212 Sum_probs=123.5
Q ss_pred ccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCcCCcccccc
Q 010424 231 RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRV 310 (511)
Q Consensus 231 RDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRV 310 (511)
||-+--+|+++. ..||++|.+|+.+...|- ..|.+|--|. |..+ + |...|+..
T Consensus 367 RD~~qd~~~~~~-~~pe~ar~~il~~~~~Q~----------~dG~v~h~~~----p~~~-----~-------g~~~~~~~ 419 (822)
T 3rrs_A 367 RDSNQDLLGFVH-LIPERARERIIDIASTQF----------ADGSAYHQYQ----PLTK-----R-------GNNDIGSG 419 (822)
T ss_dssp HHHHHHHHHHTT-TCHHHHHHHHHHHHTTCC----------TTSCCCSEEE----TTTT-----E-------ECTTTCSC
T ss_pred HHHHHHHHHHHh-cCHHHHHHHHHHHHHhhc----------ccCcccceec----CcCC-----C-------CccCCCCc
Confidence 999999999986 579999999999988553 4689998885 4211 1 33444433
Q ss_pred cccCCccHHHHHHHHHhhcccccccccc---------------hhHHHHHHHHHHhhhcCCCCCCceeeecCCccccc--
Q 010424 311 APVDSGLWWIILLRAYGKITGDYALQER---------------VDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMID-- 373 (511)
Q Consensus 311 apVDSgLWWiILLraY~k~TGD~sl~~~---------------p~vQrGIrlIL~LcL~~~Fd~fPtLlVpDGs~MID-- 373 (511)
. +|..||+|.+++.|++.|||.++.+. ..+.++++.+++-. +=+..|.+- .+.|=|
T Consensus 420 ~-~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~---g~~GLp~~g---~gDWnD~l 492 (822)
T 3rrs_A 420 F-NDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR---GPHGLPLIG---RADWNDCL 492 (822)
T ss_dssp B-TTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB---CTTSSBBCB---TCSSSTTC
T ss_pred c-cchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC---CCCCCcccC---CCcchhhc
Confidence 3 89999999999999999999999863 26788888777422 213444332 223333
Q ss_pred ----------cc-------ccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhccc
Q 010424 374 ----------RR-------MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYW 429 (511)
Q Consensus 374 ----------Rr-------MgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYW 429 (511)
.+ +|-.|-+.++++|||.||+.+.+|.+.. +..+..+...++...|+..+++++|
T Consensus 493 n~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~-G~~~~A~~~~~~A~~lk~a~~~~~W 564 (822)
T 3rrs_A 493 NLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARR-GLADVADRARGHVAEMRDALLTDGW 564 (822)
T ss_dssp CTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHHTTTB
T ss_pred ccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhcc
Confidence 21 2467999999999999999999999874 4466778888888889999999999
No 3
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=98.97 E-value=1.7e-09 Score=116.71 Aligned_cols=164 Identities=20% Similarity=0.241 Sum_probs=121.6
Q ss_pred ccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCcCCcccccc
Q 010424 231 RDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRV 310 (511)
Q Consensus 231 RDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRV 310 (511)
||-+--+|+++.. .||++|.+|+.+...|- ..|.+|--|. |..+ + |...|+..
T Consensus 360 RD~~qd~~~~~~~-~p~~~r~~il~~~~~Q~----------~dG~~~h~~~----p~~~-----~-------g~~~~~~~ 412 (811)
T 3qde_A 360 RDSNQDLLGFVHQ-IPERARERLLDLAATQL----------EDGSAYHQYQ----PLTK-----K-------GNNEIGSN 412 (811)
T ss_dssp HHHHHHHHTTTTT-CHHHHHHHHHHHHTTBC----------TTSCBCSEEC----TTTC-----C-------EECTTCCC
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHhhcc----------cCCCccceec----CCCC-----C-------CCCCCCCC
Confidence 9999999999864 79999999999888552 4788888874 3211 1 33334333
Q ss_pred cccCCccHHHHHHHHHhhcccccccccc---------------hhHHHHHHHHHHhhhcCCCCCCceeeecCCccccc--
Q 010424 311 APVDSGLWWIILLRAYGKITGDYALQER---------------VDVQTGIRLILNLCLTDGFDMFPSLLVTDGSCMID-- 373 (511)
Q Consensus 311 apVDSgLWWiILLraY~k~TGD~sl~~~---------------p~vQrGIrlIL~LcL~~~Fd~fPtLlVpDGs~MID-- 373 (511)
. +|..||+|.+++.|++.|||.++.+. ..++++++.+++-. +=+..|. ...+.|-|
T Consensus 413 ~-~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~---g~~GL~~---~g~~DWnD~l 485 (811)
T 3qde_A 413 F-NDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNL---GPHGLPL---IGRADWNDCL 485 (811)
T ss_dssp B-TTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCB---CTTSSBB---CBTCSSSTTC
T ss_pred c-ccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcC---CCCCCcc---cccCCchhhc
Confidence 3 89999999999999999999999863 36788888766421 2133343 22333433
Q ss_pred ----------cc-------ccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhccc
Q 010424 374 ----------RR-------MGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYW 429 (511)
Q Consensus 374 ----------Rr-------MgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYW 429 (511)
.+ +|-.|-+.++++|||.||+.+.+|.+.-.+ .+..+...++...|+..++++||
T Consensus 486 n~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd-~~~A~~~~~~A~~lk~a~~~~~W 557 (811)
T 3qde_A 486 NLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGL-EEEARKAQQHIDAMKEAILKYGY 557 (811)
T ss_dssp CSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHSB
T ss_pred cccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHHHHhcc
Confidence 11 245799999999999999999999987433 66778888888889999999999
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=98.44 E-value=8e-07 Score=96.80 Aligned_cols=167 Identities=18% Similarity=0.127 Sum_probs=117.3
Q ss_pred CCceeeccChHHHHHHHh-cCChHHHHHHHHHHhhccccceeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCcC
Q 010424 225 YDQVFIRDFVPSALAFLL-NGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFG 303 (511)
Q Consensus 225 YdqVFiRDfVPsaLafLl-~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADFG 303 (511)
.+-.|.+|....+++++. .|+++++|++|..+.+.| -..|.+|..+ |. . ..
T Consensus 572 Er~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q----------~~dG~ip~~~-----p~--------~----~~- 623 (956)
T 2okx_A 572 EQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSA----------DETPLYLDQV-----PS--------A----WS- 623 (956)
T ss_dssp TCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGT----------TTCTTCCSBS-----SC--------S----SC-
T ss_pred cCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc----------ccCCCcCccc-----cc--------c----cc-
Confidence 456899999999998755 689999999998887644 2368888754 31 0 00
Q ss_pred CcccccccccCCccHHHHHHHHHhhccccccccc--chhHHHHHHHHHHhhhcCCCCCCceeeecCC--cccccccc-cc
Q 010424 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE--RVDVQTGIRLILNLCLTDGFDMFPSLLVTDG--SCMIDRRM-GI 378 (511)
Q Consensus 304 e~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~--~p~vQrGIrlIL~LcL~~~Fd~fPtLlVpDG--s~MIDRrM-gV 378 (511)
. ...|.++||+++++.|.+.|||.++.+ -|.+++.++.+++..-. +. ++..++. ..|-| .+ ..
T Consensus 624 -----~-~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d~---~G--Ll~~~~~~~~DW~d-~~~~~ 691 (956)
T 2okx_A 624 -----S-VIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHIDD---SG--LLNMAGWNLLDWAP-IDQPN 691 (956)
T ss_dssp -----C-CCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBCT---TS--SBCCSSCCCCCSSS-CCCCS
T ss_pred -----C-CCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCC---CC--CEEeCCCCccCccC-CCCCC
Confidence 0 125789999999999999999999876 58888888877754322 21 2222221 12222 12 35
Q ss_pred cCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhcccccc
Q 010424 379 HGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDM 432 (511)
Q Consensus 379 ~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD~ 432 (511)
.|++...++++|.||+++.+|.+.-.. ++..++..++...|+..|+++||-.-
T Consensus 692 ~G~~~~~~a~~~~al~~~a~lA~~LG~-~~~a~~y~~~A~~lk~ai~~~~wd~~ 744 (956)
T 2okx_A 692 EGIVTHQNLFLVKALRDSRALAAAAGA-TEEADAFAARADLLAETINAVLWDEE 744 (956)
T ss_dssp SSEEHHHHHHHHHHHHHHHHHHHHTTC-GGGGHHHHHHHHHHHHHHHHHSEETT
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 688999999999999999999876433 23345556666678888999999753
No 5
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=98.29 E-value=3.5e-06 Score=93.82 Aligned_cols=175 Identities=18% Similarity=0.191 Sum_probs=123.2
Q ss_pred ccEEEeecCCCCCC-------CCCCCceeeccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCCcccccE
Q 010424 208 PVGTVAANNPADKQ-------PLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASF 280 (511)
Q Consensus 208 PVGTvAA~D~~~~~-------~LNYdqVFiRDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASF 280 (511)
+-|.|||...+--+ .-.|.-||+||.+.++++++..|.+|..+.|+.-++.+|.. ..|-++.-|
T Consensus 302 ~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~~Q~~---------~~G~~~~~y 372 (1020)
T 1ulv_A 302 PGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTYQQQ---------PDGHFPQTS 372 (1020)
T ss_dssp TTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTCC---------TTSCCCSCB
T ss_pred CCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHHHHhcC---------CCCCeeeEE
Confidence 56777886543211 11499999999999999999999999999999999988741 235566555
Q ss_pred EEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccccch-hHHHHHHHHHHhhhcCCCCC
Q 010424 281 KVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERV-DVQTGIRLILNLCLTDGFDM 359 (511)
Q Consensus 281 KV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p-~vQrGIrlIL~LcL~~~Fd~ 359 (511)
.+ ++ .+.++. .-.|..-+.+++++.|.+ + | -..-+ .+++++..|.+. +
T Consensus 373 ~i-----~G---------~~~w~~------~Q~D~~g~~l~~~~~~~~-~-d--~~~w~~~v~~al~~i~~~----g--- 421 (1020)
T 1ulv_A 373 RV-----DG---------TIGQNG------IQLDETAFPILLANQIGR-T-D--AGFYRNELKPAADYLVAA----G--- 421 (1020)
T ss_dssp CT-----TS---------CBCCCC------CBTHHHHHHHHHHHHHTC-C-C--HHHHHHTHHHHHHHHHHH----C---
T ss_pred ec-----CC---------CcCCCC------ccCccchHHHHHHHHHHh-c-C--HHHHHHHHHHHHHHHHHh----C---
Confidence 42 11 133441 247999999999999965 5 5 22234 677777776655 2
Q ss_pred CceeeecCCcccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhccccc
Q 010424 360 FPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431 (511)
Q Consensus 360 fPtLlVpDGs~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD 431 (511)
| .||-.. +-...|+-....+..|.||+++.+|.+...+ .+..++..+.-..|+..|.+++|-+
T Consensus 422 -~---~~~~~~----WEe~~g~~~~t~~~~~~AL~~aa~lA~~~G~-~~~a~~w~~~Ad~i~~~i~~~~w~~ 484 (1020)
T 1ulv_A 422 -P---KTPQER----WEETGGYSTSTLASQIAALAAAADIAGKNGD-AGSAAVYRATADEWQRSTEKWMFTT 484 (1020)
T ss_dssp -S---CBSBCT----TSSCCBEEHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHTHHHHHEES
T ss_pred -C---CCChhh----hcccCCcCHHHHHHHHHHHHHHHHHHHHcCC-hhHHHHHHHHHHHHHHHHHHhCCCC
Confidence 2 344443 3444688888999999999999999987443 3445666666666888899999975
No 6
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=98.26 E-value=7.6e-06 Score=88.33 Aligned_cols=190 Identities=15% Similarity=0.084 Sum_probs=117.1
Q ss_pred CCCceeeccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccC-CCCCcccccEEEeeecCCCCCCCceeeeccCc
Q 010424 224 NYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYS-PGQGLMPASFKVRTVPLDGGDGTLEEVLDPDF 302 (511)
Q Consensus 224 NYdqVFiRDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~-~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADF 302 (511)
+++++|.||....+++++ ...+|++|..|...+..|..+ .|.+. -..|.||.-+.-...|.+. + ..+.+
T Consensus 317 ~~~~~w~wDs~~~a~gL~-~~~~elAr~~L~~l~~~Q~~~--~d~~r~~~~G~IP~~~~~~~~p~r~--g-----~~~~~ 386 (761)
T 3c68_A 317 SGNQTWPWDTWKQAFAMA-HFNPDIAKENIRAVFSWQIQP--GDSVRPQDVGFVPDLIAWNLSPERG--G-----DGGNW 386 (761)
T ss_dssp CTTCBCHHHHHHHHHHHT-TTCHHHHHHHHHHHHTTCCCT--TCSSCGGGTTCCCSBBCSSCCGGGT--S-----CCSSC
T ss_pred CcCCeeccHHHHHHHHHH-HcCHHHHHHHHHHHHHhhhhc--ccCCccCCCCEeeeeeccCCccccc--C-----ccccc
Confidence 345599999999999776 669999999999999887422 11121 1368898876210001000 0 00122
Q ss_pred CCcccccccccCCccHHHHHHHHHhhccccccccc--chhHHHHHHHHHHhhhcCCCCCCcee--------eecCC----
Q 010424 303 GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE--RVDVQTGIRLILNLCLTDGFDMFPSL--------LVTDG---- 368 (511)
Q Consensus 303 Ge~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~--~p~vQrGIrlIL~LcL~~~Fd~fPtL--------lVpDG---- 368 (511)
+ -++.-| .||+++++.|.+.|||.+|.+ -|.+++.++++++---.++ +..+.- -.|+|
T Consensus 387 ~---~~~sqP----Pl~~~av~~yy~~tgD~~fL~e~~P~L~~~~~w~~~~rd~d~-~GL~~y~~~~~~~~~~prge~~~ 458 (761)
T 3c68_A 387 N---ERNTKP----SLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNG-NGVPEYGATRDKAHNTESGEMLF 458 (761)
T ss_dssp B---CSCCCC----CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSCTTC-SSCCCCEEECCTTTBCTTSCBEE
T ss_pred c---CCCCCc----HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCCc-CccEEecccccccccCCCcchhc
Confidence 2 123222 678899999999999999876 6777777777665422111 122110 11222
Q ss_pred ----------------------------------------ccc-----------------------ccccc-------cc
Q 010424 369 ----------------------------------------SCM-----------------------IDRRM-------GI 378 (511)
Q Consensus 369 ----------------------------------------s~M-----------------------IDRrM-------gV 378 (511)
+.| .|.+. .-
T Consensus 459 ~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~ 538 (761)
T 3c68_A 459 TVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQ 538 (761)
T ss_dssp EEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECT
T ss_pred cccccccchhcccccccchhccccccccchhhhhhhccccCCCCcchhccccccccccccccccccccchhhhhcccccc
Confidence 333 11111 11
Q ss_pred cCc---------chhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhcccccc
Q 010424 379 HGH---------PLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVDM 432 (511)
Q Consensus 379 ~G~---------PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD~ 432 (511)
.|. |.++|+++|.|++++.+|.+.-.+ .+..+...++...++.-|+++||-.-
T Consensus 539 ~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~-~e~A~~y~~~A~~lk~ai~~~fWd~e 600 (761)
T 3c68_A 539 DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGK-PEEAKRYRQLAQQLADYINTCMFDPT 600 (761)
T ss_dssp TCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHTEETT
T ss_pred ccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHhCcCcc
Confidence 132 789999999999999999876433 44456666667777888899999753
No 7
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.22 E-value=1.5e-06 Score=91.94 Aligned_cols=187 Identities=16% Similarity=0.136 Sum_probs=121.5
Q ss_pred cchHHHHHHHHHHHhhh-hcCCcccEEEeecCCCCCCCCCCCceeeccChHHHHHHHh-cCChHHHHHHHHHHhhccccc
Q 010424 186 ASNIEKEAWKLLRDAVV-NYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLL-NGEGDIVKNFLLHTLQLQSWE 263 (511)
Q Consensus 186 ~~~l~~eAwelL~~SlV-~y~g~PVGTvAA~D~~~~~~LNYdqVFiRDfVPsaLafLl-~Ge~EIVrnFL~~tL~LQs~e 263 (511)
.++++.+.|+.-..++- .+.+.|+ |-. ... +..|..|..++++..+. -++.+++++.|.. +|
T Consensus 307 sd~~lN~i~~~~~~t~~~n~~~~~~------DcP---~RE-R~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~---~~--- 370 (739)
T 3cih_A 307 NDEELNCIWEVGAYTMHLTTREFFI------DGI---KRD-RWVWSGDAIQSYLMNYYLFFDSESVKRTIWL---LR--- 370 (739)
T ss_dssp SCHHHHHHHHHHHHHHHHTBSSSBC------SBS---SSC-CCCCHHHHHHHHHHHHTTTCCHHHHHHHHHH---HH---
T ss_pred ChHHHHHHHHHHHHHHHHhccCCCc------cCc---ccc-cceecCchHHHHHHHHHHhCCHHHHHHHHHH---hc---
Confidence 46788888885444332 2233332 321 112 56899999988877553 4788888886532 12
Q ss_pred eeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhccccccccc--chhH
Q 010424 264 KTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE--RVDV 341 (511)
Q Consensus 264 k~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~--~p~v 341 (511)
|..|.. +.++ . .+|.++||+++++.|.+.|||.++.+ -|.+
T Consensus 371 ----------g~~p~~--------------------~~~~-----~--~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l 413 (739)
T 3cih_A 371 ----------GKDPVT--------------------SHSN-----T--IMDYTFYWFLSVYDYYMYSGDRHFVNQLYPRM 413 (739)
T ss_dssp ----------CCSSCC--------------------SSGG-----G--BHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred ----------cCCCCc--------------------cccC-----C--ccchhHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 333321 1121 1 26889999999999999999999976 6777
Q ss_pred HHHHHHHHHhhhcCCCCCCceeeecCC----cccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHH
Q 010424 342 QTGIRLILNLCLTDGFDMFPSLLVTDG----SCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRL 417 (511)
Q Consensus 342 QrGIrlIL~LcL~~~Fd~fPtLlVpDG----s~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL 417 (511)
++.++.+++..-. +.++ ....| ..|-|-.|+..|.+.++|+++|.||+++.+|.+.-.+ ++..++-.++.
T Consensus 414 ~~~ld~~~~~~d~---~GL~--~~~~G~W~~~dW~d~~~~~~G~~~~~~a~~y~al~~~a~lA~~lG~-~~~A~~y~~~A 487 (739)
T 3cih_A 414 QTMMDYVLGRTNK---NGMV--EGMSGDWVFVDWADGYLDKKGELSFEQVLFCRSLETMALCADLVGD-KDGQQKYEKLA 487 (739)
T ss_dssp HHHHHHHHTTBCT---TSCB--CCCTTCBCCSCCCTTCCCCSSEEHHHHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHhcCC---CCCc--ccCCCCcccCCCcccccCCCCcchHHHHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHH
Confidence 7777666653211 2222 22222 1233323556888999999999999999999886443 44456677777
Q ss_pred HHHHHhhhhccccc
Q 010424 418 SALSFHVREYYWVD 431 (511)
Q Consensus 418 ~aLs~hir~yYWlD 431 (511)
..|+.-|+++||-.
T Consensus 488 ~~lk~a~~~~~wd~ 501 (739)
T 3cih_A 488 SALKAKLEPTFWNN 501 (739)
T ss_dssp HHHHHHHHHHHEET
T ss_pred HHHHHHHHHhccCc
Confidence 77888899999964
No 8
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=97.94 E-value=3.1e-05 Score=81.90 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=113.5
Q ss_pred CCCCceeeccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCc
Q 010424 223 LNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDF 302 (511)
Q Consensus 223 LNYdqVFiRDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADF 302 (511)
-.|.-||+||.+.++++++..|.+|..+.++.-+...|. ..|-+|..+.+ ++ .+.+
T Consensus 335 ~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~~~q~----------~~G~~~~~~~~-----~G---------~p~w 390 (684)
T 1lf6_A 335 GGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLAKVVK----------DNGMIPQNTWI-----SG---------KPYW 390 (684)
T ss_dssp CGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH----------HHSSCCSCBCT-----TS---------CBCC
T ss_pred CCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHHhhcC----------CCCCcccceeC-----CC---------Cccc
Confidence 369999999999999999999999999999998888764 13334433321 11 1334
Q ss_pred CCcccccccccCCccHHHHHHHHHhhcccccccccchh-HHHHHHHHHHhhhcCCCCCCceeeecCCcccccccccccCc
Q 010424 303 GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVD-VQTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGH 381 (511)
Q Consensus 303 Ge~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p~-vQrGIrlIL~LcL~~~Fd~fPtLlVpDGs~MIDRrMgV~G~ 381 (511)
|+ .=.|+.-.++++++.| +.+| ..+. |++++..|++.-- .||-..|=|| .|+
T Consensus 391 ~~------~Q~D~~g~~l~~~~~~-~~~g-----~~~~~v~~al~~i~~~~~-----------~~~~g~WE~~----~g~ 443 (684)
T 1lf6_A 391 TG------IQLDEQADPIILSYRL-KRYD-----LYDSLVKPLADFIIKIGP-----------KTGQERWEEI----GGY 443 (684)
T ss_dssp CC------CCHHHHHHHHHHHHHT-TCGG-----GTTTTHHHHHHHHHHHCS-----------SBSSCTTSSC----CBB
T ss_pred CC------ccccchHHHHHHHHHH-HHcC-----chHHHHHHHHHHHHHhCC-----------CCCccccccc----CCc
Confidence 32 1378888888888755 5677 4565 9999999887532 2444444443 477
Q ss_pred chhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhccccc
Q 010424 382 PLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431 (511)
Q Consensus 382 PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD 431 (511)
-....+..|.||+++.+|.+...+ .+..++....-..|+..|.+++|-.
T Consensus 444 ~~~t~~~~~~aL~~~a~lA~~~g~-~~~a~~~~~~a~~i~~~i~~~~w~~ 492 (684)
T 1lf6_A 444 SPATMAAEVAGLTCAAYIAEQNKD-YESAQKYQEKADNWQKLIDNLTYTE 492 (684)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHHHEES
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHhccCC
Confidence 778888999999999999886433 4455666666667888899999975
No 9
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=97.92 E-value=0.00012 Score=71.58 Aligned_cols=133 Identities=15% Similarity=0.059 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHHhhhhcCCcccEEEeecCCCCCCCCCCCceeeccChHHHHHHHhcCChHHHHHHHHHHhh-ccccceec
Q 010424 188 NIEKEAWKLLRDAVVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQ-LQSWEKTV 266 (511)
Q Consensus 188 ~l~~eAwelL~~SlV~y~g~PVGTvAA~D~~~~~~LNYdqVFiRDfVPsaLafLl~Ge~EIVrnFL~~tL~-LQs~ek~l 266 (511)
.+.++|.+.|+. |.+..++|++.. -|..+|.||-...+++++..+..+.++. +...+. +|
T Consensus 3 ~l~~~a~~~l~~-----n~~~~~~vP~~~-------~f~~~~~wDs~~~~~gl~~~~~~~a~~~-l~~~~~~~q------ 63 (420)
T 2z07_A 3 PLRTKAVEVLQR-----NSRGAFTVPAHG-------LYPYQWLWDSAFIALGWTQVDWERAWQE-LLCLFDYGQ------ 63 (420)
T ss_dssp CHHHHHHHHHHH-----HBCSSCBCSSTT-------CCSCEEHHHHHHHHHHHTTTCHHHHHHH-HHHHHHHHC------
T ss_pred HHHHHHHHHHHH-----cCCCCCcCCCCC-------CCCCccHHHHHHHHHHHHhcCHHHHHHH-HHHHHHHHH------
Confidence 467888888887 433333443321 5999999999999998887665555554 443343 44
Q ss_pred cccCCCCCcccccEEEeeecCCCCCCCceeeeccCcCCc-ccccc--cccCCccHHHHHHHHHhhcccc----ccccc--
Q 010424 267 DCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDFGES-AIGRV--APVDSGLWWIILLRAYGKITGD----YALQE-- 337 (511)
Q Consensus 267 D~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADFGe~-AIGRV--apVDSgLWWiILLraY~k~TGD----~sl~~-- 337 (511)
-..|.||.-+. +.+ ... -.-.++.+.. +-+.+ ..+|...+.+++++.|.+.||| .++.+
T Consensus 64 ----~~~G~ip~~v~--~~~---~~~---y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~ 131 (420)
T 2z07_A 64 ----GPDGMLPHIVF--HEQ---SRD---YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYL 131 (420)
T ss_dssp ----CTTCCCCSEEE--CCS---CCC---CC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred ----hhCCCcceecc--cCC---Ccc---cCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHH
Confidence 25889998653 111 000 0001111110 00000 1245556789999999999999 77766
Q ss_pred chhHHHHHHHHHHh
Q 010424 338 RVDVQTGIRLILNL 351 (511)
Q Consensus 338 ~p~vQrGIrlIL~L 351 (511)
-|.+++.++.+++-
T Consensus 132 ~p~l~~~~~~~~~~ 145 (420)
T 2z07_A 132 FPKLLAFHRWLYHA 145 (420)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC
Confidence 57777777777654
No 10
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=97.17 E-value=0.0036 Score=65.04 Aligned_cols=167 Identities=15% Similarity=0.227 Sum_probs=104.7
Q ss_pred CCCCceeeccChHHHHHHHhcCChHHHHHHHHHHhhccccceeccccCCCCCcccccEEEeeecCCCCCCCceeeeccCc
Q 010424 223 LNYDQVFIRDFVPSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVPLDGGDGTLEEVLDPDF 302 (511)
Q Consensus 223 LNYdqVFiRDfVPsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPASFKV~~~p~~~~~~~~eE~L~ADF 302 (511)
--|..+|.||-...++++|..|.+|++|..|...+.+|. ..|.||-..+ +-|
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~r------------------~yY 172 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGNR------------------SYY 172 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBSB------------------GGG
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCCC------------------ccC
Confidence 478999999999999999999999999999999998873 2456664211 112
Q ss_pred CCcccccccccCCccHHHHHHHHHhhccccccccc--chhHHHHHHHHHHhhhcCCCCCCc------eeeecCCcccc--
Q 010424 303 GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQE--RVDVQTGIRLILNLCLTDGFDMFP------SLLVTDGSCMI-- 372 (511)
Q Consensus 303 Ge~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~--~p~vQrGIrlIL~LcL~~~Fd~fP------tLlVpDGs~MI-- 372 (511)
+ +| ++.-| ++.+++.|.+.|+| ++.+ -|.+++.+++.+ ..+-..-+ +-..+||..++
T Consensus 173 ~----~~---sqPPl-~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~----~~~~~~~~g~~~~~~~~~~~G~~l~~y 239 (535)
T 2jg0_A 173 L----SR---SQPPF-FALMVELLAQHEGD-AALKQYLPQMQKEYAYWM----DGVENLQAGQQEKRVVKLQDGTLLNRY 239 (535)
T ss_dssp T----TC---CCSCC-HHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHT----TTCTTCCTTEEETTEEECTTSCEEECC
T ss_pred C----CC---CCccH-HHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHH----hCCcccCccccccceeecCCCCcceee
Confidence 2 33 34445 77788888888887 5544 455555555433 22211000 11112331110
Q ss_pred ------------------------------------------c---ccccccC----------cchhhHHHHHHHHHHHH
Q 010424 373 ------------------------------------------D---RRMGIHG----------HPLEIQSLFYSALRCSR 397 (511)
Q Consensus 373 ------------------------------------------D---RrMgV~G----------~PLEIQaLFY~ALRca~ 397 (511)
| |.+...| .|.|+||++|.|++...
T Consensus 240 ~~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la 319 (535)
T 2jg0_A 240 WDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILA 319 (535)
T ss_dssp CCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHH
Confidence 0 1111112 67999999999999999
Q ss_pred HHhccccCchhHHHHHHHHHHHHHHhhhhccccc
Q 010424 398 EMLIVNDGTKNLVAAINNRLSALSFHVREYYWVD 431 (511)
Q Consensus 398 eLL~~~~~~~~~~~~i~~RL~aLs~hir~yYWlD 431 (511)
+|.+.-.+ .+......++-..++.-|.+++|-+
T Consensus 320 ~lA~~lG~-~~~a~~~~~~A~~lk~ai~~~fWde 352 (535)
T 2jg0_A 320 RASKAAGD-NAMANQYETLANARQKGIEKYLWND 352 (535)
T ss_dssp HHHHHHTC-HHHHHHHHHHHHHHHHHHHHHSEET
T ss_pred HHHHHhCC-hHHHHHHHHHHHHHHHHHHHhCcCC
Confidence 99876433 3344555555555667777777754
No 11
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=96.66 E-value=0.0094 Score=61.84 Aligned_cols=221 Identities=14% Similarity=0.103 Sum_probs=151.9
Q ss_pred hhhcCCcccEEEeecCCCCCCCCCCCceeeccCh--HHHHHHHhcCChHHHHHHHHHHhhccccceecccc----CCCC-
Q 010424 201 VVNYCGNPVGTVAANNPADKQPLNYDQVFIRDFV--PSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCY----SPGQ- 273 (511)
Q Consensus 201 lV~y~g~PVGTvAA~D~~~~~~LNYdqVFiRDfV--PsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~----~~g~- 273 (511)
-|.+++.+--+|..-|=. --|+||-+ .....-|++.+++| ++-+..++..|..--.+|-| +++.
T Consensus 40 tv~~~~~~~tFviTGDI~--------AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF~~~~~ 110 (426)
T 3qry_B 40 TVEILEDGSTFVLTGDIP--------AMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMTLVLKDPYANSFNIEEN 110 (426)
T ss_dssp SEEECTTSCEEECSSSSS--------EEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHHHHHHCTTCSEEESSSC
T ss_pred eeEecCCCCEEEEeCCCc--------chhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccCCCCCC
Confidence 477888887788887742 36999966 44456678899997 88888999888766555543 3321
Q ss_pred CcccccEEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccccchhHHHHHHHHHHhhh
Q 010424 274 GLMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCL 353 (511)
Q Consensus 274 GvmPASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p~vQrGIrlIL~LcL 353 (511)
|.- .+ . .+..+. .....+.-| -+||-=..+-|.+.|-+.|||.++-.. +..+|++.||+..-
T Consensus 111 ~~~-~~-~--~d~t~~----~~~v~E~Ky---------ElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~ 172 (426)
T 3qry_B 111 WKG-HH-E--TDHTDL----NGWIWERKY---------EVDSLCYPLQLAYLLWKETGETSQFDE-IFVAATKEILHLWT 172 (426)
T ss_dssp CCS-ST-T--TEESCC----CTTEEECCC---------CHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHH
T ss_pred CCC-cc-C--CCCCCC----CCeeEeecc---------HHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHHHHHHHHHH
Confidence 110 00 0 000000 012333444 389999999999999999999999764 99999999999887
Q ss_pred cC-CCCCCceeeecCC------------------ccccc---c---cccccCcchhhHHHHHHHHHHHHHHhcc--ccCc
Q 010424 354 TD-GFDMFPSLLVTDG------------------SCMID---R---RMGIHGHPLEIQSLFYSALRCSREMLIV--NDGT 406 (511)
Q Consensus 354 ~~-~Fd~fPtLlVpDG------------------s~MID---R---rMgV~G~PLEIQaLFY~ALRca~eLL~~--~~~~ 406 (511)
.+ +.+..|=-+.=+. .-||= | -.-+|||-+--.+++-.+|+.+.+|+.. -.+.
T Consensus 173 ~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d 252 (426)
T 3qry_B 173 VEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADS 252 (426)
T ss_dssp HTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTH
T ss_pred HHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCc
Confidence 74 3432222222100 11110 0 1348999999999999999999999972 2344
Q ss_pred hhHHHHHHHHHHHHHHhhhhcccccccchhhhhccCccccch
Q 010424 407 KNLVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSA 448 (511)
Q Consensus 407 ~~~~~~i~~RL~aLs~hir~yYWlD~~~ln~IyRykTEEYs~ 448 (511)
++++++..+.-..++.=|.+|-.++..+-..||.|-...||.
T Consensus 253 ~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~Gs 294 (426)
T 3qry_B 253 QSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLGN 294 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC
Confidence 566666666666677778999999988888999999999997
No 12
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=96.28 E-value=0.012 Score=61.67 Aligned_cols=215 Identities=18% Similarity=0.214 Sum_probs=145.8
Q ss_pred CcccEEEeecCCCCCCCCCCCceeeccChHHHHHH--HhcCChHHHHHHHHHHhhccccceeccc----cCCCC--Cccc
Q 010424 206 GNPVGTVAANNPADKQPLNYDQVFIRDFVPSALAF--LLNGEGDIVKNFLLHTLQLQSWEKTVDC----YSPGQ--GLMP 277 (511)
Q Consensus 206 g~PVGTvAA~D~~~~~~LNYdqVFiRDfVPsaLaf--Ll~Ge~EIVrnFL~~tL~LQs~ek~lD~----~~~g~--GvmP 277 (511)
|.|--+|..-|=. --|+||-+-=..-+ |++.+++| +.-+..++..|..--.+|- |+++. |
T Consensus 74 ~~~~tFviTGDI~--------AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYaNAF~~~~~sg--- 141 (463)
T 3p2c_A 74 GKPDTFVYTGDIH--------AMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYANAFNDGAIPD--- 141 (463)
T ss_dssp SCEEEEECCBSSC--------SEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEECSSCCTT---
T ss_pred CCCCEEEEeCCCc--------chhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccccccCCCCCCC---
Confidence 4566777777732 36999954333333 47888887 8888899988887555543 44432 2
Q ss_pred ccEEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccccchhHHHHHHHHHHhhhcC-C
Q 010424 278 ASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLTD-G 356 (511)
Q Consensus 278 ASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p~vQrGIrlIL~LcL~~-~ 356 (511)
.++ ..+ .....+--+ =|=--+||-=..+-|.+.|-|.|||.++-. .+..+|++.||+..-.+ +
T Consensus 142 ~~~--------~~d---~t~~~p~v~----ErKyElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~~~~~q~ 205 (463)
T 3p2c_A 142 GHW--------MSD---LTDMKPELH----ERKWEIDSLCYPLRLAYHYWKTTGDASIFN-EEWIQAITNVLKTFKEQQR 205 (463)
T ss_dssp CTT--------TTS---BSCCCTTEE----ECCCCHHHHHHHHHHHHHHHHHHCCCTTCS-HHHHHHHHHHHHHHHHTTC
T ss_pred Ccc--------cCC---CCCCCCcEE----EEecHhhhhhHHHHHHHHHHHhhCChhhhc-HHHHHHHHHHHHHHHHHhc
Confidence 011 001 001122111 122348999999999999999999999984 59999999999987754 4
Q ss_pred CC-CCceeeecC------------------Cccccc---c---cccccCcchhhHHHHHHHHHHHHHHhccccCchhHHH
Q 010424 357 FD-MFPSLLVTD------------------GSCMID---R---RMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVA 411 (511)
Q Consensus 357 Fd-~fPtLlVpD------------------Gs~MID---R---rMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~ 411 (511)
.+ ..|=-+.=+ ..-||= | -.-+|||-+--.+++..+|+.+.+|+..-.+.+++.+
T Consensus 206 ~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~ 285 (463)
T 3p2c_A 206 KDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSK 285 (463)
T ss_dssp SSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred cCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 44 122111100 011220 0 2348999999999999999999999986545566777
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhhhccCccccch
Q 010424 412 AINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSA 448 (511)
Q Consensus 412 ~i~~RL~aLs~hir~yYWlD~~~ln~IyRykTEEYs~ 448 (511)
...+.-..++.=|.+|-+++..+-..||.|-...||.
T Consensus 286 ~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~Gs 322 (463)
T 3p2c_A 286 ECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGFGN 322 (463)
T ss_dssp HHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecCCC
Confidence 7777666778888999999987778899999999997
No 13
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=95.97 E-value=0.012 Score=61.10 Aligned_cols=218 Identities=15% Similarity=0.133 Sum_probs=147.3
Q ss_pred hhcCCcccEEEeecCCCCCCCCCCCceeeccCh--HHHHHHHhcCChHHHHHHHHHHhhccccceecccc----CCCC-C
Q 010424 202 VNYCGNPVGTVAANNPADKQPLNYDQVFIRDFV--PSALAFLLNGEGDIVKNFLLHTLQLQSWEKTVDCY----SPGQ-G 274 (511)
Q Consensus 202 V~y~g~PVGTvAA~D~~~~~~LNYdqVFiRDfV--PsaLafLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~----~~g~-G 274 (511)
|.+ +.|--+|..-|=. --|+||-+ .....-|++.+++|. .-+..++..|..--.+|-| +++. |
T Consensus 44 v~~-~~~~tFviTGDI~--------AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~~i~~dPYaNAF~~~~~~ 113 (427)
T 3qt9_A 44 VEV-SEGDAFVITGDIP--------AMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVKCIFIDPYANAFNKEPNG 113 (427)
T ss_dssp EEE-ETTEEEECCBSSC--------SEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHHHHHHCTTCSEECSSSCC
T ss_pred eEe-CCCCEEEEeCCCc--------chhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHHHhccCcccccCCCCCCC
Confidence 555 7777788887742 36999955 333445678888865 6677888888765555443 3321 1
Q ss_pred cccccEEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccccchhHHHHHHHHHHhhhc
Q 010424 275 LMPASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLT 354 (511)
Q Consensus 275 vmPASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p~vQrGIrlIL~LcL~ 354 (511)
+++. . +...-.....+.-| -+||-=..+-|.+.|-+.|||.++-. .+..+|++.||+..-.
T Consensus 114 ---~~~~----~--d~t~~~~~v~ErKy---------ElDSL~~~l~La~~y~~~Tgd~~~f~-~~w~~a~~~il~~~~~ 174 (427)
T 3qt9_A 114 ---QKWD----N--DITKDSPWVWERKY---------EIDSLCYPVRLIHKYWKESGDETFFN-YDIKKAFNMIIDLWRV 174 (427)
T ss_dssp ---CCSS----C--CBSCCCTTEEECCC---------CTHHHHHHHHHHHHHHHHHCCCTTCC-HHHHHHHHHHHHHHHH
T ss_pred ---cCcC----C--CCCCCCCceEeecc---------HHhhhHHHHHHHHHHHHhhCChhhhh-HHHHHHHHHHHHHHHH
Confidence 0110 0 00000012333344 38999999999999999999999986 5999999999998777
Q ss_pred CC-C-CCCceeeecCC------------------ccccc---c---cccccCcchhhHHHHHHHHHHHHHHhccccCchh
Q 010424 355 DG-F-DMFPSLLVTDG------------------SCMID---R---RMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKN 408 (511)
Q Consensus 355 ~~-F-d~fPtLlVpDG------------------s~MID---R---rMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~ 408 (511)
+. . ...|=-+.=+. .-||= | -.-+|||-+.-.+++-.||+.+.+|+..-.+.++
T Consensus 175 ~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~ 254 (427)
T 3qt9_A 175 EQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEE 254 (427)
T ss_dssp GGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHH
T ss_pred HhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 54 2 11111111000 11110 1 1338999999999999999999999986545566
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccchhhhhccCccccch
Q 010424 409 LVAAINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSA 448 (511)
Q Consensus 409 ~~~~i~~RL~aLs~hir~yYWlD~~~ln~IyRykTEEYs~ 448 (511)
+.++..+.-..++.=|.+|-.++..+-..||.|-...||.
T Consensus 255 La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~Gs 294 (427)
T 3qt9_A 255 LKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGN 294 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCCC
Confidence 7777666666778888999999988888999999999997
No 14
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=95.87 E-value=0.022 Score=60.06 Aligned_cols=223 Identities=18% Similarity=0.186 Sum_probs=143.0
Q ss_pred hhcCCcccEEEeecCCCCCCCCCCCceeeccChHHHHH--HHhcCChHHHHHHHHHHhhccccceeccccCCCCCccccc
Q 010424 202 VNYCGNPVGTVAANNPADKQPLNYDQVFIRDFVPSALA--FLLNGEGDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPAS 279 (511)
Q Consensus 202 V~y~g~PVGTvAA~D~~~~~~LNYdqVFiRDfVPsaLa--fLl~Ge~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmPAS 279 (511)
|.+.+.|-=+|..-|=. --|+||-+-=..- .|++.+++| ++-+..++..|..--.+|-|--.- .-|+.
T Consensus 88 v~~~~~~~tfViTGDI~--------AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~i~~dPYaNAF-~~~~~ 157 (489)
T 2p0v_A 88 VHFDGKEDTFVYTGDIH--------AMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKCINIDPYANAF-NMNSE 157 (489)
T ss_dssp EEECSSSCEEECCBSSS--------SEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTCSEE-CSSSC
T ss_pred eeeCCCCCEEEEeCCcc--------chhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCcccccc-CCCCC
Confidence 45577777777766632 3588995433222 346778887 888888888887766665443210 00111
Q ss_pred EEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccccchhHHHHHHHHHHhhhc-CCCC
Q 010424 280 FKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIRLILNLCLT-DGFD 358 (511)
Q Consensus 280 FKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~~~p~vQrGIrlIL~LcL~-~~Fd 358 (511)
-.. +.. + ...+.|--.|+-- =+||-=--|-|++.|-+.|||.++... ...++|+.||+.... ++.+
T Consensus 158 ~~~-~~~----d---~t~~~P~v~E~Ky----ElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~~ 224 (489)
T 2p0v_A 158 GGE-WMS----D---LTDMKPELHERKW----EIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRKD 224 (489)
T ss_dssp CCG-GGG----S---SSCCCTTEEECCC----CHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCSS
T ss_pred CCC-CCC----C---CCCCCcccccccc----hhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhccc
Confidence 110 000 0 0112222111111 389988889999999999999999865 899999999999877 3333
Q ss_pred C------C------------------c---eeeecCCcccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHH
Q 010424 359 M------F------------------P---SLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVA 411 (511)
Q Consensus 359 ~------f------------------P---tLlVpDGs~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~ 411 (511)
. | | |=|+--|=-==|.- -++||=+.-.+..|.+|+.+.+|++.-.+.+++++
T Consensus 225 ~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa-~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~ 303 (489)
T 2p0v_A 225 DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDA-TTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAK 303 (489)
T ss_dssp CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCB-CSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHH
T ss_pred CCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcc-hhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 2 1 1 11110000000111 46999999999999999999999986554556666
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhhhccCccccch
Q 010424 412 AINNRLSALSFHVREYYWVDMKKINEIYRYKTEEYSA 448 (511)
Q Consensus 412 ~i~~RL~aLs~hir~yYWlD~~~ln~IyRykTEEYs~ 448 (511)
+..+.-..++.=|.+|-|++-.+...||.|-...||.
T Consensus 304 ~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~G~ 340 (489)
T 2p0v_A 304 ECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGFGN 340 (489)
T ss_dssp HHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSSC
T ss_pred HHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCCCC
Confidence 6666555667777889999877777899999999986
No 15
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=95.57 E-value=0.065 Score=55.51 Aligned_cols=187 Identities=17% Similarity=0.129 Sum_probs=108.3
Q ss_pred CCcccEEE-eecCCCCCCCCCCCceeeccChHHHHHHHhcCC--------hHHHHHHHHHHhhccccceeccccCCCCCc
Q 010424 205 CGNPVGTV-AANNPADKQPLNYDQVFIRDFVPSALAFLLNGE--------GDIVKNFLLHTLQLQSWEKTVDCYSPGQGL 275 (511)
Q Consensus 205 ~g~PVGTv-AA~D~~~~~~LNYdqVFiRDfVPsaLafLl~Ge--------~EIVrnFL~~tL~LQs~ek~lD~~~~g~Gv 275 (511)
.+.|-|.| ||.+.+ . -+|.=||+||.+-++.+++..|. .+.++.|+.-...||.... +.|-
T Consensus 45 ~~~~~GaiIASptts-n--pDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~ 114 (492)
T 2fba_A 45 NNGVPGTVIASPSTS-N--PDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGS 114 (492)
T ss_dssp TTSCTTCBCSCSCBS-S--SBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBC
T ss_pred CCCCCCeEEEeCCCC-C--CCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCC
Confidence 34555655 555543 1 26999999999999999999998 9999999997555554322 2344
Q ss_pred cc---------ccEEEeeecCCCCCCCceeeeccCcCCcccccccccCCccHHHHHHHHHhhcccccccc----------
Q 010424 276 MP---------ASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ---------- 336 (511)
Q Consensus 276 mP---------ASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDSgLWWiILLraY~k~TGD~sl~---------- 336 (511)
++ .-|- +++. .... +=||+ =-|.-=.-++++..|.+...+....
T Consensus 115 ~~~~~~~glgep~y~-----vdG~------~~~~-----~w~~~-Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~ 177 (492)
T 2fba_A 115 FDDENHKGLGEPKFN-----TDGS------AYTG-----AWGRP-QNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDI 177 (492)
T ss_dssp TTSGGGGGGGCCEEC-----TTSC------BCCS-----CCSCC-BTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTC
T ss_pred cCcccccccCceeec-----cCCC------cCCc-----ccCCc-cccchhHHHHHHHHHHHHhhccccchhhhhhhccc
Confidence 44 2342 2221 1112 22332 2466557777777776554433321
Q ss_pred ---cchhH-HHHHHHHHHhhhcCCCCCCceeeecCCcccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHH
Q 010424 337 ---ERVDV-QTGIRLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAA 412 (511)
Q Consensus 337 ---~~p~v-QrGIrlIL~LcL~~~Fd~fPtLlVpDGs~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~ 412 (511)
...++ ...|+-.++.+..---+ ||-. .+=-+.|+-...-+.-+.||.++.+|.+.... ....+.
T Consensus 178 ~~~~~~~~~~~~i~~~l~~v~~~w~~-------pd~d----lWEer~g~~~~T~~~~~~AL~~aa~lA~~~g~-~~~a~~ 245 (492)
T 2fba_A 178 NFSSTEDIYKNIIKPDLEYVIGYWDS-------TGFD----LWEENQGRHFFTSLVQQKALAYAVDIAKSFDD-GDFANT 245 (492)
T ss_dssp SCSSHHHHHHHTHHHHHHHHHHHTTS-------CEEC----TTSCCEECCHHHHHHHHHHHHHHHHHHHHTTC-HHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHhcCC-------CCCC----CcCccCCCChHHHHHHHHHHHHHHHHHHHcCC-chHHHH
Confidence 00222 23444444444332111 2222 23333366677888889999999999876433 344455
Q ss_pred HHHHHHHHHHhhhhc---ccc
Q 010424 413 INNRLSALSFHVREY---YWV 430 (511)
Q Consensus 413 i~~RL~aLs~hir~y---YWl 430 (511)
..+.-..++..|.++ +|-
T Consensus 246 w~~~ad~i~~~I~~~~~~~w~ 266 (492)
T 2fba_A 246 LSSTASTLESYLSGSDGGFVN 266 (492)
T ss_dssp HHHHHHHHHHHHHSTTTCCEE
T ss_pred HHHHHHHHHHHHHHhhhcCCC
Confidence 555555677778777 884
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.14 E-value=0.077 Score=56.23 Aligned_cols=182 Identities=13% Similarity=0.100 Sum_probs=97.4
Q ss_pred CCcccEE-EeecCCCCCCCCCCCceeeccChHHHHHHH----hcCChHHHHHHHHHHh---hccccceeccccCCCCCcc
Q 010424 205 CGNPVGT-VAANNPADKQPLNYDQVFIRDFVPSALAFL----LNGEGDIVKNFLLHTL---QLQSWEKTVDCYSPGQGLM 276 (511)
Q Consensus 205 ~g~PVGT-vAA~D~~~~~~LNYdqVFiRDfVPsaLafL----l~Ge~EIVrnFL~~tL---~LQs~ek~lD~~~~g~Gvm 276 (511)
.|.|-|. |||.+.+ . -+|.=||+||.+-++.+++ ..|..|..+.|+.-+. .||..-. . .|-.
T Consensus 29 ~~~~tGaiIAsptts-~--pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~y~-~------~G~~ 98 (599)
T 2vn4_A 29 FGTSAGAVIASPSTI-D--PDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGLSN-P------SGSL 98 (599)
T ss_dssp TTSCTTCBCSCSCCS-S--SCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHCCB-T------TBCS
T ss_pred CCCCCceEEEECCCC-C--CCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeeeeC-C------CCCc
Confidence 3445555 4555543 2 2799999999999999999 8898887777766665 3554322 2 3333
Q ss_pred cccEEEeeecCCCCCCCceeeeccCcC---CcccccccccCC-----ccHHHHHHHHHhhccccccccc---chhHHHHH
Q 010424 277 PASFKVRTVPLDGGDGTLEEVLDPDFG---ESAIGRVAPVDS-----GLWWIILLRAYGKITGDYALQE---RVDVQTGI 345 (511)
Q Consensus 277 PASFKV~~~p~~~~~~~~eE~L~ADFG---e~AIGRVapVDS-----gLWWiILLraY~k~TGD~sl~~---~p~vQrGI 345 (511)
|.. +.+. |.....| | ..+=||+- -|. .=.++.+.+ | ..+|+..+.. .+-+++.+
T Consensus 99 ~~~-~~l~----------E~~~~ld-G~~~~~~w~~~Q-~D~~glr~~~~~~~~~~-~-~~~g~~~~~~~~~w~~v~~~l 163 (599)
T 2vn4_A 99 ADG-SGLG----------EPKFELT-LKPFTGNWGRPQ-RDGPALRAIALIGYSKW-L-INNNYQSTVSNVIWPIVRNDL 163 (599)
T ss_dssp TTS-GGGG----------CCEECTT-SCBCCSCCSCCC-THHHHHHHHHHHHHHHH-H-HHTTCHHHHHHHTHHHHHHHH
T ss_pred ccc-cCcC----------ceEEecC-CccccCcCCCee-ccccchhHHHHHHHHHH-H-HHhCCcccccHHHHHHHHHHH
Confidence 322 0000 0001111 1 11234422 233 124455555 5 5678766432 34555555
Q ss_pred HHHHHhhhcCCCCCCceeeecCCcccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhh
Q 010424 346 RLILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVR 425 (511)
Q Consensus 346 rlIL~LcL~~~Fd~fPtLlVpDGs~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir 425 (511)
..+.+.--.++||. +=-+.|+-...-+.-+.||+||.+|.+...... ++-.+.-..+...|
T Consensus 164 ~~v~~~w~~~d~dl---------------WEer~g~~~~T~~~~~~aL~~aa~lA~~~g~~~---~~w~~~ad~i~~~i- 224 (599)
T 2vn4_A 164 NYVAQYWNQTGFDL---------------WEEVNGSSFFTVANQHRALVEGATLAATLGQSG---SAYSSVAPQVLCFL- 224 (599)
T ss_dssp HHHHHHTTSCEECT---------------TSCCEEEEHHHHHHHHHHHHHHHHHHHHHTCCC---HHHHHHHHHHHHHH-
T ss_pred HHHHHhCCCCCCCe---------------eeecCCcchHHHHHHHHHHHHHHHHHHHcCCCH---HHHHHHHHHHHHHH-
Confidence 55444433333332 222345566677888999999999987533321 22222223345556
Q ss_pred hcccc
Q 010424 426 EYYWV 430 (511)
Q Consensus 426 ~yYWl 430 (511)
+++|-
T Consensus 225 ~~~w~ 229 (599)
T 2vn4_A 225 QRFWV 229 (599)
T ss_dssp GGGEE
T ss_pred HhhcC
Confidence 66774
No 17
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=94.54 E-value=0.25 Score=51.24 Aligned_cols=179 Identities=14% Similarity=0.110 Sum_probs=94.7
Q ss_pred CcccEE-EeecCCCCCCCCCCCceeeccChHHHHHHH---hcCC---hHHHHHHHHHHhhccccceeccccCCCCCccc-
Q 010424 206 GNPVGT-VAANNPADKQPLNYDQVFIRDFVPSALAFL---LNGE---GDIVKNFLLHTLQLQSWEKTVDCYSPGQGLMP- 277 (511)
Q Consensus 206 g~PVGT-vAA~D~~~~~~LNYdqVFiRDfVPsaLafL---l~Ge---~EIVrnFL~~tL~LQs~ek~lD~~~~g~GvmP- 277 (511)
|.|-|. |||...+ . -+|.=||+||.+-++.+++ ..|. .+.+.+|+.....||.... ..|-++
T Consensus 31 ~~~tGaiIASptts-n--pDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~ 100 (472)
T 1gai_A 31 GADSGIVVASPSTD-N--PDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSS 100 (472)
T ss_dssp TCCTTCBCSCSCBS-S--SBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTT
T ss_pred CCCCceEEeeCCCC-C--CCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCcccc
Confidence 445554 4555543 1 2699999999999999999 7776 5556666666655663322 233344
Q ss_pred -----ccEEEeeecCCCCCCCceeeeccCcCCcccccccccCC-----ccHHHHHHHHHhhcccccccccchhHHHHHHH
Q 010424 278 -----ASFKVRTVPLDGGDGTLEEVLDPDFGESAIGRVAPVDS-----GLWWIILLRAYGKITGDYALQERVDVQTGIRL 347 (511)
Q Consensus 278 -----ASFKV~~~p~~~~~~~~eE~L~ADFGe~AIGRVapVDS-----gLWWiILLraY~k~TGD~sl~~~p~vQrGIrl 347 (511)
.-|- +++.. ...+.| |+- -|. -=.++.+.+ | ..+|+..+. ..++...|+.
T Consensus 101 ~glgE~~y~-----vdG~~------~~~~w~-----~~Q-~D~~g~ra~~~~~~~~~-l-~~~g~~~~~-~~~~w~~i~~ 160 (472)
T 1gai_A 101 GGLGEPKFN-----VDETA------YTGSWG-----RPQ-RDGPALRATAMIGFGQW-L-LDNGYTSAA-TEIVWPLVRN 160 (472)
T ss_dssp TGGGCCEEC-----TTSCB------CCSCCS-----CCC-THHHHHHHHHHHHHHHH-H-HHTTCHHHH-HHTHHHHHHH
T ss_pred CCCCCceEc-----cCCCc------cCCcCC-----Ccc-ccccchhHHHHHHHHHH-H-HHcCCcccc-chhHHHHHHH
Confidence 4453 23211 112222 211 233 112344554 4 556775432 2223344555
Q ss_pred HHHhhhcCCCCCCceeeecCCcccccccccccCcchhhHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHhhhhc
Q 010424 348 ILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQSLFYSALRCSREMLIVNDGTKNLVAAINNRLSALSFHVREY 427 (511)
Q Consensus 348 IL~LcL~~~Fd~fPtLlVpDGs~MIDRrMgV~G~PLEIQaLFY~ALRca~eLL~~~~~~~~~~~~i~~RL~aLs~hir~y 427 (511)
.|+.+..---+ ||-. .+=-+.|+-...-+.-+.||.++.+|.+..... .++-.+.-..+...| ++
T Consensus 161 ~l~~v~~~w~~-------pd~d----lWEer~g~~~~T~~~~~~AL~~aa~lA~~~g~~---~~~w~~~ad~I~~~i-~~ 225 (472)
T 1gai_A 161 DLSYVAQYWNQ-------TGYD----LWEEVNGSSFFTIAVQHRALVEGSAFATAVGSS---CSWCDSQAPQILCYL-QS 225 (472)
T ss_dssp HHHHHHHHTTS-------CEEC----TTSCCEEEEHHHHHHHHHHHHHHHHHHHHTTCC---CHHHHHHHHHHHHHH-GG
T ss_pred HHHHHHHhcCC-------CCCC----CCcccCCCCHHHHHHHHHHHHHHHHHHHHcCCc---HHHHHHHHHHHHHHH-Hh
Confidence 55444332211 2222 222234666777888999999999998764332 122222233345566 66
Q ss_pred cc
Q 010424 428 YW 429 (511)
Q Consensus 428 YW 429 (511)
+|
T Consensus 226 ~w 227 (472)
T 1gai_A 226 FW 227 (472)
T ss_dssp GB
T ss_pred hc
Confidence 77
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=36.84 E-value=1.2e+02 Score=33.08 Aligned_cols=83 Identities=12% Similarity=-0.004 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhccccccccc---chhHHHHHHHHHHhhhcCC---CCCCceeeecCCccccc--ccccccCcchhhHHHH
Q 010424 318 WWIILLRAYGKITGDYALQE---RVDVQTGIRLILNLCLTDG---FDMFPSLLVTDGSCMID--RRMGIHGHPLEIQSLF 389 (511)
Q Consensus 318 WWiILLraY~k~TGD~sl~~---~p~vQrGIrlIL~LcL~~~---Fd~fPtLlVpDGs~MID--RrMgV~G~PLEIQaLF 389 (511)
|-.-.++-|.+.|||.+|.+ -|=+...-+..++++-.+. +...|+. -||=..-.. .-..+.+ +-+.+++.
T Consensus 452 wla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~-sPE~~~~~~g~~~~~~~n-~tytn~~~ 529 (803)
T 2rdy_A 452 WLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPST-SPEQRFRIGEKGYAVSSA-TTMDLSLI 529 (803)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBC-BTTBCEEETTEEECCBSC-CHHHHHHH
T ss_pred HHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCC-cccccccCCCcccccccC-hHHHHHHH
Confidence 44556788889999999965 4667777777777765432 2222322 233111000 0011222 46777777
Q ss_pred HHHHHHHHHHhcc
Q 010424 390 YSALRCSREMLIV 402 (511)
Q Consensus 390 Y~ALRca~eLL~~ 402 (511)
...|+.|.++.+.
T Consensus 530 ~~~l~~a~~a~~~ 542 (803)
T 2rdy_A 530 AECFDNCIQAAKR 542 (803)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888887776654
Done!