Query 010428
Match_columns 511
No_of_seqs 302 out of 1632
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 00:24:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010428.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010428hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 6E-111 1E-115 865.0 35.7 488 6-497 9-498 (571)
2 COG1621 SacC Beta-fructosidase 100.0 1.1E-87 2.5E-92 710.4 39.3 414 39-491 22-460 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 4.4E-80 9.5E-85 661.1 40.0 307 40-381 8-335 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 2.1E-79 4.5E-84 654.3 43.5 382 50-487 1-397 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 8.6E-78 1.9E-82 614.8 25.6 300 50-369 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 1.1E-68 2.3E-73 543.9 33.9 286 56-372 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 1.1E-56 2.3E-61 452.2 29.9 267 59-363 1-279 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 3.5E-39 7.6E-44 321.8 27.6 242 60-335 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 6.2E-37 1.3E-41 305.9 27.9 270 59-357 1-286 (286)
10 cd08997 GH68 Glycosyl hydrolas 100.0 4.8E-26 1E-30 234.4 30.4 271 60-361 9-344 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 3.3E-23 7.1E-28 209.9 19.8 191 49-248 4-282 (291)
12 cd09004 GH43_bXyl Glycosyl hyd 99.8 7.5E-20 1.6E-24 184.0 20.3 191 55-283 5-197 (275)
13 cd08993 GH43_DUF377 Glycosyl h 99.8 7.2E-20 1.6E-24 183.6 19.0 146 60-227 2-155 (268)
14 cd08984 GH43_5 Glycosyl hydrol 99.8 3.5E-19 7.6E-24 181.2 21.0 162 58-248 79-246 (294)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.8 1E-17 2.2E-22 169.0 21.7 186 56-274 6-200 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.7 1.5E-16 3.2E-21 160.1 20.8 195 60-283 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.7 1.4E-15 3E-20 151.1 20.3 190 60-283 2-201 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.7 6.8E-15 1.5E-19 149.2 21.9 180 60-274 2-204 (294)
19 cd08992 GH43_like_1 Glycosyl h 99.6 1.5E-14 3.2E-19 149.4 18.9 178 46-231 24-247 (349)
20 cd08998 GH43_ABN_1 Glycosyl hy 99.6 4E-14 8.6E-19 143.4 20.1 179 58-273 1-192 (288)
21 cd08984 GH43_5 Glycosyl hydrol 99.6 1.1E-13 2.5E-18 140.8 19.9 169 58-248 11-193 (294)
22 cd08985 GH43_6 Glycosyl hydrol 99.5 1.4E-12 3E-17 131.0 21.1 189 60-284 5-203 (265)
23 cd09000 GH43_XYL_1 Glycosyl hy 99.5 3.8E-12 8.2E-17 129.1 19.5 178 56-273 6-196 (288)
24 cd09003 GH43_AXH_1 Glycosyl hy 99.4 8.7E-12 1.9E-16 128.1 20.5 187 56-273 7-215 (311)
25 PF04616 Glyco_hydro_43: Glyco 99.4 1.6E-11 3.5E-16 123.4 19.1 183 56-274 8-200 (286)
26 PF04041 DUF377: Domain of unk 99.4 1.9E-12 4E-17 133.0 12.3 163 60-241 34-201 (312)
27 cd08983 GH43_4 Glycosyl hydrol 99.4 4.9E-11 1.1E-15 120.6 22.2 184 55-272 15-206 (276)
28 cd08988 GH43_ABN Glycosyl hydr 99.3 6.9E-11 1.5E-15 119.5 20.2 180 59-273 1-193 (279)
29 cd08981 GH43_2 Glycosyl hydrol 99.3 8.6E-11 1.9E-15 119.7 20.6 151 56-220 4-161 (291)
30 cd08979 GH_J Glycosyl hydrolas 99.3 3.3E-11 7.2E-16 120.1 15.9 137 56-205 64-209 (276)
31 cd08992 GH43_like_1 Glycosyl h 99.3 2E-10 4.4E-15 118.9 19.3 169 59-248 113-310 (349)
32 cd08989 GH43_XYL Glycosyl hydr 99.3 4.3E-10 9.2E-15 113.2 19.5 174 56-274 6-190 (269)
33 cd09001 GH43_XYL_2 Glycosyl hy 99.2 1E-09 2.3E-14 110.4 18.5 169 56-273 9-191 (269)
34 cd08986 GH43_7 Glycosyl hydrol 99.2 1.2E-09 2.7E-14 109.9 18.1 177 57-273 1-202 (269)
35 cd08980 GH43_1 Glycosyl hydrol 99.1 4.7E-09 1E-13 106.4 18.5 188 60-284 2-205 (288)
36 cd09002 GH43_XYL_3 Glycosyl hy 99.1 4.4E-09 9.5E-14 106.6 17.9 121 57-204 14-134 (280)
37 cd08993 GH43_DUF377 Glycosyl h 99.0 3E-09 6.4E-14 106.8 14.1 100 121-229 3-104 (268)
38 COG2152 Predicted glycosylase 98.9 2.2E-08 4.7E-13 100.2 15.6 153 59-231 32-193 (314)
39 cd08982 GH43_3 Glycosyl hydrol 98.9 6.3E-08 1.4E-12 98.9 19.0 171 58-284 3-191 (295)
40 cd08987 GH62 Glycosyl hydrolas 98.9 9.9E-08 2.1E-12 95.7 18.3 191 51-283 14-217 (303)
41 PF02435 Glyco_hydro_68: Levan 98.9 5.1E-08 1.1E-12 102.5 15.7 192 60-271 64-317 (428)
42 cd08994 GH43_like_2 Glycosyl h 98.7 1.2E-07 2.5E-12 96.3 12.4 108 59-171 81-198 (291)
43 cd08995 GH32_Aec43_like Glycos 98.7 7.2E-07 1.6E-11 89.9 16.4 133 58-206 62-201 (280)
44 cd08999 GH43_ABN_2 Glycosyl hy 98.6 1.8E-06 3.8E-11 87.2 17.4 155 58-228 62-227 (287)
45 cd08991 GH43_bXyl_2 Glycosyl h 98.6 6.1E-06 1.3E-10 83.7 20.7 157 56-226 53-227 (294)
46 cd08990 GH43_AXH_like Glycosyl 98.6 4.9E-06 1.1E-10 83.7 19.6 154 55-229 61-219 (274)
47 cd08978 GH_F Glycosyl hydrolas 98.6 2.3E-06 5E-11 84.9 16.8 156 55-226 56-215 (271)
48 PF04041 DUF377: Domain of unk 98.4 1E-06 2.3E-11 90.7 10.4 105 115-229 29-135 (312)
49 cd08772 GH43_62_32_68 Glycosyl 98.4 8.2E-06 1.8E-10 81.3 16.2 157 56-226 58-224 (286)
50 cd08986 GH43_7 Glycosyl hydrol 98.4 2.9E-06 6.3E-11 85.5 12.7 121 184-329 2-147 (269)
51 cd08983 GH43_4 Glycosyl hydrol 98.4 1.7E-06 3.7E-11 87.6 10.0 90 166-273 4-99 (276)
52 cd08989 GH43_XYL Glycosyl hydr 98.3 9.4E-06 2E-10 81.7 13.4 78 168-273 1-87 (269)
53 cd09002 GH43_XYL_3 Glycosyl hy 98.3 1.4E-05 2.9E-10 81.1 14.1 78 167-273 7-84 (280)
54 cd08998 GH43_ABN_1 Glycosyl hy 98.2 4.1E-05 8.8E-10 77.7 16.6 154 55-224 55-217 (288)
55 cd08996 GH32_B_Fructosidase Gl 98.2 1.5E-05 3.3E-10 81.0 13.0 133 60-206 65-202 (298)
56 cd08981 GH43_2 Glycosyl hydrol 98.2 2.2E-05 4.8E-10 80.0 14.0 77 182-273 4-87 (291)
57 cd09004 GH43_bXyl Glycosyl hyd 98.0 0.00038 8.2E-09 70.0 17.9 141 58-227 66-212 (275)
58 cd08985 GH43_6 Glycosyl hydrol 98.0 0.00077 1.7E-08 67.8 19.2 148 55-228 62-214 (265)
59 PF04616 Glyco_hydro_43: Glyco 97.9 0.00011 2.4E-09 73.8 11.9 149 61-226 70-222 (286)
60 TIGR01322 scrB_fam sucrose-6-p 97.9 0.00018 3.8E-09 77.8 13.4 134 60-205 88-225 (445)
61 cd08997 GH68 Glycosyl hydrolas 97.8 0.00035 7.5E-09 72.9 14.7 148 67-225 80-284 (349)
62 COG3507 XynB Beta-xylosidase [ 97.8 0.00032 7E-09 75.8 13.6 141 90-248 56-215 (549)
63 COG2152 Predicted glycosylase 97.7 0.00032 7E-09 70.7 11.8 114 106-230 13-139 (314)
64 smart00640 Glyco_32 Glycosyl h 97.7 0.00028 6.1E-09 76.1 11.4 131 64-205 74-215 (437)
65 cd08988 GH43_ABN Glycosyl hydr 97.6 0.002 4.4E-08 65.2 16.5 150 57-224 56-218 (279)
66 cd09003 GH43_AXH_1 Glycosyl hy 97.6 0.0039 8.5E-08 64.2 18.8 146 59-228 79-246 (311)
67 cd09001 GH43_XYL_2 Glycosyl hy 97.6 0.002 4.4E-08 64.8 15.5 134 58-225 76-212 (269)
68 cd08980 GH43_1 Glycosyl hydrol 97.4 0.0036 7.9E-08 63.4 14.8 146 54-205 109-260 (288)
69 PF03664 Glyco_hydro_62: Glyco 97.4 0.012 2.6E-07 57.8 17.1 185 51-274 16-208 (271)
70 cd09000 GH43_XYL_1 Glycosyl hy 97.2 0.012 2.7E-07 59.5 16.1 146 55-226 65-219 (288)
71 cd00260 Sialidase Sialidases o 97.0 0.022 4.8E-07 59.1 16.0 165 43-226 58-238 (351)
72 PF13088 BNR_2: BNR repeat-lik 97.0 0.0052 1.1E-07 61.3 10.8 148 58-226 48-199 (275)
73 cd08982 GH43_3 Glycosyl hydrol 96.6 0.03 6.5E-07 57.3 13.2 80 117-204 159-239 (295)
74 cd08987 GH62 Glycosyl hydrolas 96.4 0.1 2.2E-06 53.1 15.1 144 58-226 78-230 (303)
75 PF00251 Glyco_hydro_32N: Glyc 96.0 0.14 3E-06 52.6 13.8 114 124-248 15-138 (308)
76 PF13088 BNR_2: BNR repeat-lik 95.9 0.22 4.8E-06 49.5 14.4 161 69-248 1-168 (275)
77 cd00260 Sialidase Sialidases o 95.0 5 0.00011 41.5 21.5 171 64-248 21-207 (351)
78 PF13859 BNR_3: BNR repeat-lik 93.6 0.39 8.4E-06 49.6 9.4 148 60-230 62-216 (310)
79 PF08244 Glyco_hydro_32C: Glyc 92.1 0.08 1.7E-06 43.6 1.6 37 443-486 8-44 (86)
80 COG3507 XynB Beta-xylosidase [ 88.1 8.6 0.00019 42.4 13.3 149 53-221 86-243 (549)
81 PTZ00334 trans-sialidase; Prov 88.0 8.4 0.00018 44.5 13.7 152 58-230 179-353 (780)
82 PF13810 DUF4185: Domain of un 86.4 44 0.00095 34.7 17.9 152 60-225 96-271 (316)
83 COG3940 Predicted beta-xylosid 81.2 9.6 0.00021 37.1 8.7 102 64-172 137-247 (324)
84 COG1621 SacC Beta-fructosidase 77.0 54 0.0012 36.1 14.0 97 127-233 50-154 (486)
85 PF02435 Glyco_hydro_68: Levan 71.8 64 0.0014 34.9 12.7 128 68-206 143-320 (428)
86 COG3940 Predicted beta-xylosid 63.7 1.5E+02 0.0034 29.1 13.7 160 53-230 65-245 (324)
87 PF13810 DUF4185: Domain of un 60.1 42 0.0009 34.8 8.5 96 126-227 102-210 (316)
88 KOG0228 Beta-fructofuranosidas 37.8 1.1E+02 0.0024 33.8 7.4 91 127-227 68-167 (571)
89 PF03664 Glyco_hydro_62: Glyco 23.9 7.6E+02 0.016 24.9 14.4 70 60-139 78-153 (271)
90 PF08244 Glyco_hydro_32C: Glyc 22.5 3.7E+02 0.0079 21.5 6.7 35 444-479 50-84 (86)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-111 Score=865.00 Aligned_cols=488 Identities=60% Similarity=1.041 Sum_probs=452.8
Q ss_pred HHHHHHHHHHHhhceeeecccccccccccccCC-CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCC
Q 010428 6 LSLFLFFALFLGHGVVELQASHHVYRNLQTSQS-TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVW 84 (511)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~ 84 (511)
++|+|+..+++.+.|..+.+.+.+++.|+...+ ...+.++||.|||||++|||||| +|++|.|||||||||+++.|
T Consensus 9 ~~l~l~~~~~~~~~vk~~da~~~~~~~l~~~s~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavw 85 (571)
T KOG0228|consen 9 VLLLLLVTLNLTNYVKGLDAFHQNYAGLQSESPSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVW 85 (571)
T ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhhhhcccCccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCcee
Confidence 467777788889988888999999888866433 46788999999999999999999 89999999999999999999
Q ss_pred CCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeee
Q 010428 85 GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVK 164 (511)
Q Consensus 85 g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K 164 (511)
|+++||||+|+|||||+.+|+||.|++++|.+|||||||+++++|+++++|||.+.+.+|+|.+|++.|.+||+|++|.|
T Consensus 86 g~ivWGHavSkDLinW~~lp~Ai~Ps~~~ding~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k 165 (571)
T KOG0228|consen 86 GNIVWGHAVSKDLINWEALPPAIAPSEWFDINGCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSK 165 (571)
T ss_pred eeeEeeeecchhhccccccCcccCCCCccccCccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeec
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred cCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCce
Q 010428 165 SPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDF 244 (511)
Q Consensus 165 ~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdl 244 (511)
.++||++.++.-.+++...||||+++|.+++|+|+|++|+.++.+|.+.+|+|+|+++|+..+.|++....+||||||||
T Consensus 166 ~~gnp~~~p~~V~~in~s~FRDPttaW~~~dgkWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdf 245 (571)
T KOG0228|consen 166 DGGNPFMKPDKVLGINSSQFRDPTTAWFGQDGKWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDF 245 (571)
T ss_pred CCCceeeccccccCCChhhccCCceeeecCCCcEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCc
Confidence 99999997552246778899999999999999999999999888899999999999999999899999889999999999
Q ss_pred EEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCCCccceeeecCCCC
Q 010428 245 FPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTFFDGAKN 324 (511)
Q Consensus 245 f~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf~d~~~g 324 (511)
|++...|++|++.+..+...|||++.|+.+++.++|+||+||+++.+|+|+..+.+.....+.|||.|||+|||.|..++
T Consensus 246 fpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~ 325 (571)
T KOG0228|consen 246 FPVSITGTDGLDWSLFGSINKHVLKASLGGTSNDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKG 325 (571)
T ss_pred EEecccCCCCceEEEeccccccccccccCCceeEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCC
Confidence 99999999999988877777999999999889999999999999999999998877766789999999999999999999
Q ss_pred cEEEEEeccCCCCCCCCCCCCCccccccceEEEEec-CCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccce
Q 010428 325 RRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDK-SGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQ 403 (511)
Q Consensus 325 rril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~-~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (511)
|||+|||++|+++..++..+||+|+|||||+++|++ .|++|.|+|++|++.||...+...+..+++|...++.++++.|
T Consensus 326 rrIlwgWa~es~~~~dd~~kgw~g~qtipRki~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q 405 (571)
T KOG0228|consen 326 RRILWGWASESDYTNDDPTKGWRGLQTIPRKIWLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQ 405 (571)
T ss_pred cEEEEEecccCcccccchhcccccccccceEEEeeccCCCcccccchheeecccccccCccccccCCceeEEeccccccc
Confidence 999999999999999999999999999999999998 7889999999999999999998888888999999999999999
Q ss_pred eeeEEEEEEcccccccccCCCccCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCC
Q 010428 404 ADVEISFDVSDFKKAEKLDPGWTNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQS 483 (511)
Q Consensus 404 ~die~~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~ 483 (511)
+|+|+.|++.++++++.+++.+++++.+|..++..++++.||||+.++|+.+++|+|+++|+++|.. .++.++||+|++
T Consensus 406 ~dvev~f~~~~Leka~~~~~~~t~~~~~c~~~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~-~~~~v~~csd~~ 484 (571)
T KOG0228|consen 406 ADVEVTFEVEDLEKAIVIEPSWTDPQFLCLTGGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAK-KKYVVLMCSDQS 484 (571)
T ss_pred ccceEEEEecccccccccCccccccceeeecCCcccccCCCcceEEEEeecCcccceeeeEEEeecC-CcceeEEeccCC
Confidence 9999999999999999898888889999998889999999999999999999999999999999987 488999999999
Q ss_pred CccCccccCccCCC
Q 010428 484 RSLQFFSFNISSIS 497 (511)
Q Consensus 484 ~Ss~~~~~~~~~~~ 497 (511)
|||+.-+.-+.+..
T Consensus 485 ~sSl~~d~~k~~~~ 498 (571)
T KOG0228|consen 485 RSSLAEDNYKPSIG 498 (571)
T ss_pred Ccccccccccccee
Confidence 99998776554443
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-87 Score=710.35 Aligned_cols=414 Identities=30% Similarity=0.548 Sum_probs=317.6
Q ss_pred CCCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCe
Q 010428 39 TSPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGC 118 (511)
Q Consensus 39 ~~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~ 118 (511)
....++|||.|||+||.||||||||++|++|+|||||||+|+++.||+||||||+|+|||||+++|+||.|++++|.+||
T Consensus 22 ~~~~~~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ 101 (486)
T COG1621 22 SVAKSPYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGC 101 (486)
T ss_pred hccCCCCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCc
Confidence 45568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeEEEcCCCceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCC
Q 010428 119 WSGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGP 194 (511)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~ 194 (511)
||||||++ +|...+||||+.. .+.+.||+|+|+|+ .+|+|+.+|||+..| +++ +.+||||||+|. +
T Consensus 102 ySGSAV~~-~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p--~~~-t~hFRDPKv~w~-~ 171 (486)
T COG1621 102 YSGSAVVD-DGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQP--EGY-TPHFRDPKVVWD-E 171 (486)
T ss_pred eeeeEEEe-CCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCC--Ccc-cccCCCCccccc-C
Confidence 99999985 8999999999754 37789999999995 578997789999888 666 789999998898 7
Q ss_pred CCeEEEEEeeec-CCccEEEEEEcCCCCCcEEccccccc-CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 195 DKRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 195 ~g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~-~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
+|+|||++||+. +..|+|+||+|+||++|++.+++... ...++||||||||+|+ +...+ .+|++.++.
T Consensus 172 ~~~~~~mlgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~--~~~~~--------~~~pqg~~~ 241 (486)
T COG1621 172 GGKWWMMLGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELD--GEDVL--------LFWPQGLSI 241 (486)
T ss_pred CCcEEEEEEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEec--CcCce--------EEcceeeec
Confidence 899999999987 56899999999999999999876555 3345699999999999 42222 366666664
Q ss_pred CC-----CceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC--CCCCCC
Q 010428 273 DD-----TKHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV--NDDVKK 344 (511)
Q Consensus 273 ~~-----~~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~--~~~~~~ 344 (511)
++ .....|++|+||++ +|.+... .+.+||+|+ |||||||.++ +||||++|||++|+.. .++...
T Consensus 242 ~~~~~~n~~~~~Y~vG~~dg~--~f~~~~~-----~~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~ 313 (486)
T COG1621 242 NGGEYDNIYQSGYFVGDFDGK--EFKLDDG-----QFRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDE 313 (486)
T ss_pred CCCcCCCcceeEEEEEeeccc--eeEecCC-----CceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCcccc
Confidence 43 35689999999986 5655542 367999999 9999999985 8999999999999986 566678
Q ss_pred CCccccccceEEEEecCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcccccceeeeEEEEEEcccccccc--cC
Q 010428 345 GWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTGVTAAQADVEISFDVSDFKKAEK--LD 422 (511)
Q Consensus 345 gW~g~lslPReL~l~~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~~die~~~~l~~~~~~e~--~~ 422 (511)
||+|||||||||+|. +| +|+|+|++||++||.++....+..+++. ..+....+.+.++++.+... + +.. +.
T Consensus 314 ~w~~~mTlpRel~l~-~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~~--~-~~~~~~~ 386 (486)
T COG1621 314 GWRGAMTLPRELTLE-DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIWT--D-ATSFGLE 386 (486)
T ss_pred CcCccceeeEEEEEc-CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeecc--c-cceEEEE
Confidence 999999999999996 46 6999999999999999766666666554 22333333444433222111 0 100 00
Q ss_pred CCc--------cCccccccccCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCC-CCccCcccc
Q 010428 423 PGW--------TNPQLLCSQKGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQ-SRSLQFFSF 491 (511)
Q Consensus 423 ~~~--------~~~~~~~~~~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~-~~Ss~~~~~ 491 (511)
++. .....++..+..+ ..-...+|-...+ .+.....|..+|+.+. ++.++|++.++ +.|+..+..
T Consensus 387 l~~~~~~~~~~~~~~~l~ldR~~s-~~f~~~~~~~r~~--~~~~~~~v~l~if~D~-ssvEiF~NdGe~v~T~rifp~ 460 (486)
T COG1621 387 LRMGLNLVGYDVENETLTLDRSDS-PLFTVQDGETREC--FIENGAKVHLRIFVDN-SSVEIFINDGEKVFTSRIFPT 460 (486)
T ss_pred eecCcceeccccccceEEEecccc-ccccccCCceeee--ccCCCceEEEEEEEeC-CeEEEEEcCCceEEEEEecCC
Confidence 000 1122344444322 1112233322222 2233333778888887 89999998766 455555443
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=4.4e-80 Score=661.10 Aligned_cols=307 Identities=34% Similarity=0.612 Sum_probs=264.7
Q ss_pred CCCCCCCccccccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeE
Q 010428 40 SPNQPYRTGYHFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCW 119 (511)
Q Consensus 40 ~~~~~~Rp~yHf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~ 119 (511)
..+++|||+|||+|+.||||||||++|++|+||||||++|+++.||+||||||+|+|||||+++|+||.|++.+|+.|||
T Consensus 8 ~~~~~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~ 87 (445)
T TIGR01322 8 ALQSEWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCY 87 (445)
T ss_pred hccCCcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceE
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCCceEEEEeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 120 SGSATILPGEKPAIFYTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 120 SGsav~~~dg~~~l~YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
||||++ .+|+++|||||+.. .+.+.|++|+|+|+ .+|+|.. +|||.++ +.....+||||+| |+ .+
T Consensus 88 sGsav~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~--~~~~~~~fRDP~V-~~-~~ 156 (445)
T TIGR01322 88 SGSAVD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELP--PAGYTAHFRDPKV-WK-HN 156 (445)
T ss_pred ECeEEe-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCC--CCCCcCcCCCCcE-Ee-EC
Confidence 999987 58999999999743 24678999999885 6899974 5999754 3333578999995 65 47
Q ss_pred CeEEEEEeeec-CCccEEEEEEcCCCCCcEEcccccccC----C-CCCceecCceEEeccCCCCCccccCCCCCceeEEE
Q 010428 196 KRWRVIIGSKI-NRKGLAILYRSKDFVHWIKAKHPLHSV----K-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLK 269 (511)
Q Consensus 196 g~w~m~~ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~~----~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~ 269 (511)
|+|||++|++. +..|++++|+|+||++|++.+.+.... . .+.||||||||+|+ | ||||+
T Consensus 157 g~~~M~~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~--~-------------k~vL~ 221 (445)
T TIGR01322 157 GHWYMVIGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLD--G-------------QDVLL 221 (445)
T ss_pred CEEEEEEEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEEC--C-------------cEEEE
Confidence 89999999986 456899999999999999987554332 2 34599999999998 5 88888
Q ss_pred EeeCCC----------ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCC
Q 010428 270 VSLDDT----------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSV 338 (511)
Q Consensus 270 ~S~~~~----------~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~ 338 (511)
+|..+. ..+.|++|+||.++.+|+|++. ..++|+|+ |||+|||.++ +||||+||||++++..
T Consensus 222 ~s~~g~~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~ 294 (445)
T TIGR01322 222 FSPQGLDASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEID 294 (445)
T ss_pred EeccccCcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccC
Confidence 886431 1367999999988889987642 46899998 9999999985 7999999999999876
Q ss_pred CCCCCCCCccccccceEEEEecCCCeEEecchHHHHHhhhcce
Q 010428 339 NDDVKKGWAGIQAIPRKLWLDKSGKHLVQWPVVEIEKLRVNQV 381 (511)
Q Consensus 339 ~~~~~~gW~g~lslPReL~l~~~g~~L~q~Pv~el~~LR~~~~ 381 (511)
.++.+.||+|+|||||+|+|+ +| +|+|+||+||++||.+..
T Consensus 295 ~~~~~~~W~g~lslpR~l~l~-~g-~L~~~Pv~el~~lr~~~~ 335 (445)
T TIGR01322 295 YPTDRDGWAHCMTLPRELTLK-DG-KLVQTPLRELKALRTEEH 335 (445)
T ss_pred CCCccCCcccccccCEEEEEe-CC-eEEEEEhHHHHHHhcCcc
Confidence 666778999999999999997 57 699999999999998654
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=2.1e-79 Score=654.31 Aligned_cols=382 Identities=47% Similarity=0.861 Sum_probs=297.0
Q ss_pred cccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 50 Hf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
||+|+.||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++++||.|+.++|+.|||||||+++ +|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~~-~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVID-PG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEEC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 77
Q ss_pred ceEEEEeccCCC------CcceE-EEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010428 130 KPAIFYTGIDPH------NRQVQ-NLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (511)
Q Consensus 130 ~~~l~YTg~~~~------~~q~q-~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ 202 (511)
+++|||||+... ..+.| +.|.++| +++|+|+++||||.++ +++...+||||+|+|. ++|+|||++
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~--p~~~~~~fRDP~Vf~~-~~~~~~m~~ 151 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPP--PGIGTEHFRDPKVFWY-DGDKWYMVI 151 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCC--CCCCCCCcCCCCccEE-CCCEEEEEE
Confidence 799999997421 12333 4454444 3899999889999765 5556789999998776 447999999
Q ss_pred eeec-CCccEEEEEEcCCCCCcEEccccccc--CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeE
Q 010428 203 GSKI-NRKGLAILYRSKDFVHWIKAKHPLHS--VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (511)
Q Consensus 203 ga~~-~~~G~i~ly~S~Dl~~W~~~~~~l~~--~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~ 279 (511)
|++. ++.|+|++|+|+||++|++.+.++.. ...++||||||||+|+.+| ...||||++|..+.....
T Consensus 152 g~~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~ 221 (437)
T smart00640 152 GASDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNY 221 (437)
T ss_pred EEEecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccE
Confidence 9876 45799999999999999998765543 2234799999999998443 235999999998767789
Q ss_pred EEEEEEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCC-CCCCCCCccccccceEEE
Q 010428 280 YTVGTYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVN-DDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 280 Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~-~~~~~gW~g~lslPReL~ 357 (511)
|++|.++++ .+|+|+.... .....++|+|+ |||||||.++..+|||+||||++++... .....||+|+|||||||+
T Consensus 222 y~~G~~~g~-~~f~~~~~~~-~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~ 299 (437)
T smart00640 222 YFVGYFDGS-DQFTPDDPED-VGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELT 299 (437)
T ss_pred EEEEEEcCc-eeEeECCccc-cCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEE
Confidence 999999863 5798876431 12345899998 9999999986456999999999997422 222389999999999999
Q ss_pred Ee-cCCCeEEecchHHHHHhhhcceeccceEecCCcEEEEcc--cccceeeeEEEEEEcccccccccCCCccCccccccc
Q 010428 358 LD-KSGKHLVQWPVVEIEKLRVNQVQVPSKLLKGGSVIEVTG--VTAAQADVEISFDVSDFKKAEKLDPGWTNPQLLCSQ 434 (511)
Q Consensus 358 l~-~~g~~L~q~Pv~el~~LR~~~~~~~~~~~~~~~~~~~~~--~~~~~~die~~~~l~~~~~~e~~~~~~~~~~~~~~~ 434 (511)
|+ ++| +|+|+||+||++||... ......+..+....+.. ..+.+++|+++|+...
T Consensus 300 l~~~~g-~L~~~Pv~el~~lr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~-------------------- 357 (437)
T smart00640 300 LDKTGG-KLLQWPVEELESLRNVK-ELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDS-------------------- 357 (437)
T ss_pred EEecCC-EEEEeecHHHHhhhCcc-cccceeecCCceeeeecccCCccEEEEEEEEEeCC--------------------
Confidence 96 556 69999999999999542 23333343332222221 2344455555544310
Q ss_pred cCCcccCCcccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCccC
Q 010428 435 KGASVKGALGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSLQ 487 (511)
Q Consensus 435 ~~~~~~~~~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss~ 487 (511)
....+||+.+.++++.+|.|.|.|+..... +++||++|..
T Consensus 358 ------~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~-------l~vdR~~~~~ 397 (437)
T smart00640 358 ------GGAGPFGLLVLASEDLSEQTAVYFDVSKGT-------LCLDRRSSGT 397 (437)
T ss_pred ------CcceeEEEEEEeCCCCCceEEEEEEcCCeE-------EEEecCCCCC
Confidence 001369999999999999999999865321 5668866653
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=8.6e-78 Score=614.81 Aligned_cols=300 Identities=42% Similarity=0.834 Sum_probs=247.8
Q ss_pred cccCCCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 50 HFQPPKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 50 Hf~p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
||+|+.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++++||.|++.+|+.|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999986 66
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecC-CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSP-KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR 208 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~-~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~ 208 (511)
+++|||||+.....|.|++|+|.|.+ ++|+|++ +||||..+. ++ ...+||||+|+|. ++++|+|++|++...
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p-~~-~~~~~RDP~v~~~-~~~~~~m~~g~~~~~ 152 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPP-PG-DTTDFRDPKVFWR-EDGRWYMLLGAGRDG 152 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSS-TT-SCTSEEEEEEEEE-CTTEEEEEEEEEETT
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecc-cC-CCCccccCeEEEe-cCCEEEEEEeccccC
Confidence 89999999977568999999996643 8999998 499997530 33 6789999998798 569999999999888
Q ss_pred ccEEEEEEcCCCCCcEEcccccccCC-CCCceecCceEEeccCCCCCccccCCCCCceeEEEEee----CCCceeEEEEE
Q 010428 209 KGLAILYRSKDFVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL----DDTKHEYYTVG 283 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~----~~~~~~~Y~iG 283 (511)
.|+|++|+|+||++|++.+.+..... .++||||||||+|+..+. + ....+|||++|. .....+.|+||
T Consensus 153 ~g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-~------~~~~~~vl~~s~~g~~~~~~~~~Y~vG 225 (308)
T PF00251_consen 153 RGCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-G------TGKWVWVLIFSPQGIEDNGHGTYYMVG 225 (308)
T ss_dssp EEEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-S------SEEEEEEEEEEEESTTTTTTEEEEEEE
T ss_pred cceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-c------cceEEEEEEecccccccccccceEEeE
Confidence 89999999999999999876554433 467999999999994410 0 112367899998 34578999999
Q ss_pred EEeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCC-CCCCCccccccceEEEEecC
Q 010428 284 TYSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDD-VKKGWAGIQAIPRKLWLDKS 361 (511)
Q Consensus 284 ~~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~-~~~gW~g~lslPReL~l~~~ 361 (511)
++|..+.+|+++. ....++|+|+ |||+|||.++.++|||+||||++++..... .+.||+|+|||||||+|+++
T Consensus 226 ~~d~~~~~f~~~~-----~~~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~~ 300 (308)
T PF00251_consen 226 DFDFDGGTFTPDD-----SSFQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKDE 300 (308)
T ss_dssp EEETTTTEEEESS-----TTSEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEETT
T ss_pred EecCCCCeeeeec-----cccceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEEC
Confidence 9987788998762 1268999999 999999999755599999999999875322 26899999999999999864
Q ss_pred CCeEEecc
Q 010428 362 GKHLVQWP 369 (511)
Q Consensus 362 g~~L~q~P 369 (511)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 55799998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=1.1e-68 Score=543.87 Aligned_cols=286 Identities=40% Similarity=0.726 Sum_probs=245.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
||||||||++|++|+||||||++|.++.||+++||||+|+|||||+++++||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988899999999999986449999999
Q ss_pred eccCC---CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccE
Q 010428 136 TGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGL 211 (511)
Q Consensus 136 Tg~~~---~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~ 211 (511)
||+.. ...+.|++|+|+|. +++|+|...+|++.++ .....+||||+|++. +|+|||++|++. +..|+
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~~---~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~ 151 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPPP---DGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGR 151 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcCC---CCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcE
Confidence 99864 46789999999853 3899999889988632 335678999997554 599999999986 35789
Q ss_pred EEEEEcCCCCCcEEccccc-ccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCC------ceeEEEEEE
Q 010428 212 AILYRSKDFVHWIKAKHPL-HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT------KHEYYTVGT 284 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~l-~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~------~~~~Y~iG~ 284 (511)
|.+|+|+||++|++.+.+. .......|||||+||++++. .||||++|.... ..+.|++|+
T Consensus 152 i~ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~~-------------~k~vL~~s~~~~~~~~~~~~~~y~~G~ 218 (298)
T cd08996 152 ILLYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDVE-------------GKWVLIFSPQGLEPEGNGSGTGYLVGD 218 (298)
T ss_pred EEEEECCCCCCCEEcceecccCCCccceEeCCcEEEECCC-------------CeEEEEECCCCCCCCCCccceEEEEEE
Confidence 9999999999999876542 23344679999999999842 299999997643 457999999
Q ss_pred EeCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCCC
Q 010428 285 YSTAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (511)
Q Consensus 285 ~d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (511)
+++. .|+++. ....++|+|+ |||+|+|.++ ++|||+||||++++...+..+.||+|+|||||||+|++++
T Consensus 219 ~~~~--~~~~~~-----~~~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~~~- 289 (298)
T cd08996 219 FDGT--TFTFDH-----TEFGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKDGG- 289 (298)
T ss_pred EECC--CCeEec-----CCceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEccCC-
Confidence 9975 555431 1257899998 9999999986 8999999999999887777889999999999999999765
Q ss_pred eEEecchHH
Q 010428 364 HLVQWPVVE 372 (511)
Q Consensus 364 ~L~q~Pv~e 372 (511)
+|.|+||+|
T Consensus 290 ~l~~~P~~e 298 (298)
T cd08996 290 RLYQRPVRE 298 (298)
T ss_pred EEEEEeCCC
Confidence 799999976
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=1.1e-56 Score=452.25 Aligned_cols=267 Identities=28% Similarity=0.480 Sum_probs=222.4
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCC--CCcEEEEEEeCCCCcceecCCCCCC-CCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVW--GNIVWAHSTSKDLINWIPHDPAIYP-SQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~--g~~~WgHa~S~DLvhW~~~~~aL~P-~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
.|| .++|++|+||||||++|.+..| ++++||||+|+||+||+++++||.| +..+|..|||||||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 488 7999999999999999999888 8999999999999999999999988 4567889999999987 489999999
Q ss_pred eccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CC
Q 010428 136 TGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NR 208 (511)
Q Consensus 136 Tg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~~ 208 (511)
||+.. ...+.|++|+|+|+ ++|+|.+.+||+.++ +++...+||||+|+|.+++|+|||++|++. +.
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~--~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~ 151 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADG--EGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNR 151 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCc--cccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCC
Confidence 99764 25678999999874 799998888998744 555667899999766544799999999875 35
Q ss_pred ccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CceeEEEEEEEeC
Q 010428 209 KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTYST 287 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~-~~~~~Y~iG~~d~ 287 (511)
.|+|.+|+|+||++|++.+ ++.......|||||++|+++ | +|||++|.+. .....|++|+-.
T Consensus 152 ~g~i~~~~S~Dl~~W~~~~-~~~~~~~~~~~E~P~l~~~~--g-------------~~~L~~s~~~~~~~~~Y~~~~~~- 214 (280)
T cd08995 152 RGCIALFTSKDLKNWEYEE-PFYAPGLYFMPECPDLFKMG--D-------------WWYLVYSEFSENRKTHYRVSKSP- 214 (280)
T ss_pred CeEEEEEEeCCcCcceecC-ceecCCCcceeecceEEEEC--C-------------EEEEEEEeccCCCcEEEEEeCCC-
Confidence 6899999999999999875 45444445699999999998 5 9999999763 346789999622
Q ss_pred CCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecCCC
Q 010428 288 AKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKSGK 363 (511)
Q Consensus 288 ~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~g~ 363 (511)
.+.|.... ...+| |+ |||||||.++ |||||||||++++...++.+.||+|+|| ||+|.+.+||.
T Consensus 215 -~g~~~~~~-------~~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~~g~ 279 (280)
T cd08995 215 -FGPWRAPD-------DDTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNEDGT 279 (280)
T ss_pred -CCCeEcCC-------cCccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECCCCc
Confidence 34564322 23589 88 9999999985 9999999999999877888899999998 67788887774
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=3.5e-39 Score=321.81 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=192.1
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCcceecCCCC--CCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHDPAI--YPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g-~~~WgHa~S~DLvhW~~~~~aL--~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
||+.+. |+||||||++|.+..++ ..+||||+|+||+||++.+.+| .|...+|..+||+|+++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565443 89999999999987654 4568999999999999999887 56678889999999999864499999999
Q ss_pred ccCC--CCcceEEEEEecCCCCcccceeeecCCCcee-----cCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CC
Q 010428 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLM-----APDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NR 208 (511)
Q Consensus 137 g~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi-----~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~ 208 (511)
+... ...+.|++|+|+|+ ++|+|.+.+|++ ..+ ......++|||+|++.+.+|+|+|++++.. +.
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~--~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~ 157 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNP--GPWDDHAWRDPAVVRDEEGGGWRMYYGARDADE 157 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCC--CCcccccccccEEEEECCCCEEEEEEEeEccCC
Confidence 9863 46788999999885 799998777753 122 233456899999765533399999999875 34
Q ss_pred ccEEEEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC-CceeEEEEEEE
Q 010428 209 KGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD-TKHEYYTVGTY 285 (511)
Q Consensus 209 ~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~-~~~~~Y~iG~~ 285 (511)
.++|.+|+|+|+++|++.+.. ........+||||++|+++ | +|+|+++... .....|.+|..
T Consensus 158 ~~~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~--g-------------~~~l~~~~~~~~~~~~y~vg~~ 222 (276)
T cd08979 158 RGAIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKID--G-------------RWYLLYSGRNEDAKTGYRVGTA 222 (276)
T ss_pred CcEEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEEC--C-------------EEEEEEEecCccCCccEEEEec
Confidence 688999999999999987653 1222345699999999997 5 9999998764 45678999987
Q ss_pred eCCCCeeecCCCCcCCCCccccccCC-CccceeeecCCCCcEEEEEeccCC
Q 010428 286 STAKDRYVPDEGSVESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNES 335 (511)
Q Consensus 286 d~~~~~F~p~~~~~d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~ 335 (511)
+.. .|.|.. ...+|.|. |||+|++.+.+++||+++|||+++
T Consensus 223 ~~~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 223 LFG--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred ccC--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 653 455542 35799999 999999987557999999999986
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=6.2e-37 Score=305.86 Aligned_cols=270 Identities=29% Similarity=0.447 Sum_probs=205.9
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|||| +++++|+||||||++|.+ +.++|+|++|+||+||++++.+|. |...++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999875 678999999999999999998884 67777889999999998644999999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccEE
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLA 212 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~i 212 (511)
||+... ...+.+++|+|+|.. ..|++...+||+.... .......+|||+|+ .+++|+|||++++.. ...+.|
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~-~~~~~~~~~Dp~v~-~d~dG~~y~~~~~~~~~~~~~i 150 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNP-PAADVSNFRDPFVF-EDDDGKWYLVFGSGDHHNFGGI 150 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCC-CccccccccCCeEE-EcCCCCEEEEEccccCCCCCeE
Confidence 999753 356789999998864 3466655556664220 22344679999964 546699999999865 245779
Q ss_pred EEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC------CceeEEEEEE
Q 010428 213 ILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD------TKHEYYTVGT 284 (511)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~------~~~~~Y~iG~ 284 (511)
.+++|+|+.+|+..+.. .......+++|||++|+++ | +|+|++|... .....|++++
T Consensus 151 ~~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~--g-------------~~yL~~s~~~~~~~~~~y~~~~~~~~ 215 (286)
T cd08772 151 FLYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKN--G-------------KYYLFYSINGTGRVDSTYSIGYARSE 215 (286)
T ss_pred EEEEcCCCCCcccccceeeEeeccCCCceeccEEEEEC--C-------------EEEEEEEcCCCcCCCCCcceEEEEcc
Confidence 99999999999876543 1223346699999999997 6 8999998654 3456788886
Q ss_pred EeCCCCeeecCCCCc-CCCCccccccCC-CccceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEE
Q 010428 285 YSTAKDRYVPDEGSV-ESDSGLRFDYGK-YYASKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLW 357 (511)
Q Consensus 285 ~d~~~~~F~p~~~~~-d~~~~~~lD~G~-fYA~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~ 357 (511)
.+ .+.|++..... ........|.+. +||++.|.++ +||+++++|+.+++.... ...+|+++|+|||+++
T Consensus 216 ~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~ 286 (286)
T cd08772 216 SD--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLLW 286 (286)
T ss_pred CC--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCccccccccccC
Confidence 43 35665543210 000123466777 9999999986 799999999999875333 5579999999999874
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.95 E-value=4.8e-26 Score=234.42 Aligned_cols=271 Identities=20% Similarity=0.257 Sum_probs=172.1
Q ss_pred CCcceEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~-~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|..|-+. ++|..-+|+...|.. +.|+.+||||++|+||+||++.+ +|.|++.+|..|||||||++..+|+++||
T Consensus 9 d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~lf 87 (349)
T cd08997 9 DRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQLF 87 (349)
T ss_pred CCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEEE
Confidence 5556333 677755999988765 46889999999999999999955 57788899999999999998667999999
Q ss_pred EeccCC----CCcceEEEEEecCCCCcccceeeecC--CCceecCCC------------CCcCCCCCCCCCEEEEeCCCC
Q 010428 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSP--KNPLMAPDA------------MNQINTSSFRDPTTAWLGPDK 196 (511)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~--~nPVi~~p~------------~~~~~~~~fRDP~vvw~~~~g 196 (511)
|||+.+ .+...|++|.+.+.. +..|.+.. ..+++.++. .+.....+||||+|+..+++|
T Consensus 88 YTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G 164 (349)
T cd08997 88 YTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETG 164 (349)
T ss_pred EeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCC
Confidence 999853 356788888776531 12333211 234443221 011235689999964432379
Q ss_pred eEEEEEeeecC-C---------------------------ccEEEEE--EcCCCCCcEEcccccccCC-CCCceecCceE
Q 010428 197 RWRVIIGSKIN-R---------------------------KGLAILY--RSKDFVHWIKAKHPLHSVK-GTGMWECPDFF 245 (511)
Q Consensus 197 ~w~m~~ga~~~-~---------------------------~G~i~ly--~S~Dl~~W~~~~~~l~~~~-~~g~wECPdlf 245 (511)
+|||+++++.. . .|+|.++ +|+|+.+|++.+ ||.... -...||||++|
T Consensus 165 ~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~-PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 165 KTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLP-PLLEANGVNDELERPHVV 243 (349)
T ss_pred cEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcC-ccccCCCcCCceEcceEE
Confidence 99999998762 2 2556555 678999999876 554433 24579999999
Q ss_pred EeccCCCCCccccCCCCCceeEEEEeeCCC---------ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccC--CCcc
Q 010428 246 PVSTYGLNGLDTSDMGPNTKHVLKVSLDDT---------KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYG--KYYA 314 (511)
Q Consensus 246 ~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~---------~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G--~fYA 314 (511)
+++ | ||+|+.|.... ...++++++ .-.+.|.|-+.. .+.+=.- .-|.
T Consensus 244 ~~~--g-------------k~yL~~s~~~~~~~~~~~~~~~~~g~vsd--sl~GP~~~~n~s-----glvl~~p~~~~~~ 301 (349)
T cd08997 244 FHN--G-------------KYYLFTISHRSTFAPGLSGPDGLYGFVSD--SLRGPYKPLNGS-----GLVLGNPTDAPFQ 301 (349)
T ss_pred EEC--C-------------EEEEEEeCCcCccccccCCCCcEEEEEeC--CCCCCCccCCCC-----cceeCCCCCCccc
Confidence 998 6 99999884322 123444553 122456554311 1111100 2333
Q ss_pred ceeeecCCCCcEEEEEeccCCCCCCCCCCCCCccccccceEEEEecC
Q 010428 315 SKTFFDGAKNRRVLWGWVNESSSVNDDVKKGWAGIQAIPRKLWLDKS 361 (511)
Q Consensus 315 ~qtf~d~~~grril~gW~~~~~~~~~~~~~gW~g~lslPReL~l~~~ 361 (511)
+++.+--++ -++...|.+..... ......|.++-.-.|.|+.+
T Consensus 302 ~ys~~~~p~--~lv~Sfid~~~~~~--~~~~~~gT~aPt~~l~~~gd 344 (349)
T cd08997 302 TYSWYVMPN--GLVTSFIDNVGFAD--GGSRFGGTLAPTLKLNLKGD 344 (349)
T ss_pred cceEEEECC--CEEEEEecccCCcc--cccccCCeeCCeEEEEEcCC
Confidence 444433222 36666777665321 12456666655555666543
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.91 E-value=3.3e-23 Score=209.91 Aligned_cols=191 Identities=21% Similarity=0.317 Sum_probs=142.9
Q ss_pred ccccCCCCCccCCcceEEE-CCEEEEEeeeCCCCCC---C-CCcEEEEEEeCCCC-cceecCCCCCCC--CCccCCCeEe
Q 010428 49 YHFQPPKNWINDPNGVMIY-KGIYHLFYQYNPKGAV---W-GNIVWAHSTSKDLI-NWIPHDPAIYPS--QQSDINGCWS 120 (511)
Q Consensus 49 yHf~p~~gw~NDPnG~~~~-~G~YHLFYQ~~P~~~~---~-g~~~WgHa~S~DLv-hW~~~~~aL~P~--~~~D~~g~~S 120 (511)
.+|..+..++.+|. +++. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ ..||+.++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 46788889999995 6665 5899999999987643 2 23569999999987 899999999887 4689999999
Q ss_pred eeEEEcCCCceEEEEeccCC-------CCcceEEEEEecCCCCcccceeeecCCCceecCC------------------C
Q 010428 121 GSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPD------------------A 175 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p------------------~ 175 (511)
++++.. +|+++|+||+... ...+.+++|+|++.. .+|++. .+|||.+. +
T Consensus 83 P~vi~~-~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~----g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKRF-DGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLD----GPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEEE-CCEEEEEEEcccCCcccccCCCCceEEEEEeCCCC----CCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 999874 7999999999753 235678888887642 367775 45665320 0
Q ss_pred C---------------------------C-c-------------CCCCCCCCCEEEEeCCCCeEEEEEeeecC----Ccc
Q 010428 176 M---------------------------N-Q-------------INTSSFRDPTTAWLGPDKRWRVIIGSKIN----RKG 210 (511)
Q Consensus 176 ~---------------------------~-~-------------~~~~~fRDP~vvw~~~~g~w~m~~ga~~~----~~G 210 (511)
. . + .....+|||+ ||+ ++|+|||+++++.+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 0 0 0 0123579999 577 56999999998753 468
Q ss_pred EEEEEEcCCCCCcEEccccccc-----CC----CCCceecCceE-Eec
Q 010428 211 LAILYRSKDFVHWIKAKHPLHS-----VK----GTGMWECPDFF-PVS 248 (511)
Q Consensus 211 ~i~ly~S~Dl~~W~~~~~~l~~-----~~----~~g~wECPdlf-~l~ 248 (511)
++.+|+|+|+++|++.+.++.. .+ ...|||||++| ..+
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~ 282 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDED 282 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCC
Confidence 8999999999999998655321 11 35799999999 777
No 12
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.84 E-value=7.5e-20 Score=183.97 Aligned_cols=191 Identities=18% Similarity=0.263 Sum_probs=139.1
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCC-CCccCCCeEeeeEEEcCCCceEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPS-QQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~-~~~D~~g~~SGsav~~~dg~~~l 133 (511)
.||++||+ +++++|+||||++..+.+. ....|.+++|+||+||+.++.+|.+. ..++..++|+++++. .+|+++|
T Consensus 5 ~g~~~DP~-i~~~~g~yY~~~t~~~~~~--~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPE-IRIFGGTYYIYPTSDGAGG--EQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCC-eEEECCEEEEEEeccCCCC--CeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 46899996 5789999999998765322 25689999999999999999998764 456678999999987 4899999
Q ss_pred EEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
+||+. +.+++|+|++.. -.|++..++|++... . .....+||.+ |.+++|+|||++++. +.+.
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~----~~~~ 142 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKF--T--FGAQPIDPDV-FIDDDGQAYLYWGGW----GHCN 142 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCC--c--CCCCccCCCe-EECCCCCEEEEEcCc----CCEE
Confidence 99986 457899998764 357775567887543 1 2346899995 555789999999864 2233
Q ss_pred EE-EcCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 214 LY-RSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 214 ly-~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
++ -|+|+.+|+.....+ ......+.|||.+|+.+ | +++|++|........|.+|
T Consensus 143 i~~l~~d~~~~~~~~~~~-~~~~~~~~EgP~i~k~~--G-------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 143 VAKLNEDMISFDGERDGS-EITPKNYFEGPFMFKRN--G-------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred EEEECCCcccccCcceee-eccCCCceecceEEEEC--C-------------EEEEEEECCCCCCCCceEE
Confidence 33 478998886432221 11234589999999997 6 8888888754322334444
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.84 E-value=7.2e-20 Score=183.59 Aligned_cols=146 Identities=18% Similarity=0.227 Sum_probs=115.2
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC-CCCCC--CCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYP--SQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~-~aL~P--~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
|| |+++++|+||||||.++.. +.++||||+|+|++||++.+ +.|.| +..++..+|++++++. .+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~~-~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIVK-IDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEEE-ECCEEEEEEE
Confidence 78 8999999999999987643 57899999999999999975 34666 5678889999999986 4999999999
Q ss_pred ccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeC-CCCeEEEEEeeec---CCccE
Q 010428 137 GIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLG-PDKRWRVIIGSKI---NRKGL 211 (511)
Q Consensus 137 g~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~-~~g~w~m~~ga~~---~~~G~ 211 (511)
+... ...+.+++|.|+|. ++|+|.. . ++. + ..||+. +|.+ .+|+|+|++.... +..+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~--------~~~d~~-~~p~~~~g~y~m~~r~~~~~~~~~~~ 139 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P--------NNRDGI-LFPEKINGKYVMLHRPFEYGGTSPPD 139 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C--------CCCCEE-EeeEEECCEEEEEEccccCCCCCCCc
Confidence 9763 35678999999885 8999973 2 221 2 137887 4542 4899999996442 24678
Q ss_pred EEEEEcCCCCCcEEcc
Q 010428 212 AILYRSKDFVHWIKAK 227 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~ 227 (511)
|.+++|+|+.+|+..+
T Consensus 140 I~lA~S~Dl~~W~~~~ 155 (268)
T cd08993 140 MWLSFSPDLVHWGNHR 155 (268)
T ss_pred EEEEECCCcCccCCCe
Confidence 9999999999998764
No 14
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.83 E-value=3.5e-19 Score=181.16 Aligned_cols=162 Identities=21% Similarity=0.298 Sum_probs=124.3
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCC--CCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGA--VWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~--~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
+.+| -+++++|+||||||++|..+ .++.++|+||+|+||++|++.+++.. +..++.+++++.+.+|+++|+|
T Consensus 79 ~WAP-~v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~~-----~~~~~iD~~vf~~~dg~~yl~y 152 (294)
T cd08984 79 FWAP-EVVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVDL-----DSDRVIDACVFKLPDGRWRMWY 152 (294)
T ss_pred eeCc-eEEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCcccc-----CCCCcEEeEEEEeCCCEEEEEE
Confidence 4578 47899999999999998753 34678999999999999999887632 2357899999887679999999
Q ss_pred eccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEE
Q 010428 136 TGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (511)
Q Consensus 136 Tg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly 215 (511)
|+.. ..+.+++|.|+|. .+|++. .+++... ..++|+| |+ .+|+|||+++. ..| +.+|
T Consensus 153 ~~~~--~~~~~~~a~s~D~-----~~w~~~--~~~i~~~--------~~EgP~v-~k-~~g~yym~~~~---~~g-~~~~ 209 (294)
T cd08984 153 KDER--RGSTTYAADSEDL-----YHWTVE--GPVLGDR--------PHEGPNV-FR-WKGYYWMIIDE---WKG-LGVY 209 (294)
T ss_pred ECCC--CCeEEEEEECCCC-----CEEEeC--CccccCC--------CCCCCCe-eE-ECCEEEEEEcC---Cce-EEEE
Confidence 9863 3346689998874 789985 3565422 2479995 55 57899999854 234 6799
Q ss_pred EcCCCCCcEEcccccccCC----CCCceecCceEEec
Q 010428 216 RSKDFVHWIKAKHPLHSVK----GTGMWECPDFFPVS 248 (511)
Q Consensus 216 ~S~Dl~~W~~~~~~l~~~~----~~g~wECPdlf~l~ 248 (511)
+|+|+.+|++.+.++.... ...+++||++++.+
T Consensus 210 ~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 210 RSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred ECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 9999999999887665321 23478999999886
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.79 E-value=1e-17 Score=169.03 Aligned_cols=186 Identities=20% Similarity=0.203 Sum_probs=132.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-ccCCCeEeeeEEEcCCCceEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-SDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.+-|| .+++++|+|+||+..... .+|++++|+||+||+..+.+|.+... .+..++|.++++. .+|+++|+
T Consensus 6 ~~~~DP-~i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~~-~~g~y~~~ 77 (287)
T cd08999 6 GDFPDP-SVIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVSY-VNGKYVLY 77 (287)
T ss_pred CCCCCC-eEEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEEE-ECCEEEEE
Confidence 456799 577889999999986532 57999999999999999988877654 4556789888876 48999999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCcc---
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG--- 210 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G--- 210 (511)
|++... ...+.+++|+|++.. -.|++....++..+. .....+||.| +.+++|+|||++++.....|
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~~~~~~~~~-----~~~~~~Dp~v-~~d~dG~~Yl~~~~~~~~~~~~~ 147 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHGKPPLCCPE-----GEGGAIDPSF-FTDTDGKRYLVWKSDGNSIGKPT 147 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCCcceEecCC-----CCCCccCCCe-EECCCCCEEEEEeccCCCCCCCc
Confidence 999765 245667889887753 368876433333222 1245799995 55468999999987542212
Q ss_pred EEEEEE-cCCCCCcEEcccccccC---CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 211 LAILYR-SKDFVHWIKAKHPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~~~l~~~---~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.+.+.+ |.|+.+|......+... ....++|||.+|+.+ | +|+|++|...
T Consensus 148 ~i~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~--g-------------~yyl~~S~~~ 200 (287)
T cd08999 148 PIYLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRG--G-------------YYYLFYSAGG 200 (287)
T ss_pred eEEEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEEC--C-------------EEEEEEEcCC
Confidence 244443 78998886432222111 134589999999997 6 8999998753
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.74 E-value=1.5e-16 Score=160.10 Aligned_cols=195 Identities=15% Similarity=0.211 Sum_probs=139.6
Q ss_pred CCcceEEECCEEEEEeeeCCCCCC---CCCcEEEEEEeCCCCcceecCCCCCCCC--CccCCCeEeeeEEEcCCCceEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAV---WGNIVWAHSTSKDLINWIPHDPAIYPSQ--QSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~---~g~~~WgHa~S~DLvhW~~~~~aL~P~~--~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
|| .+++++|+||||.......+. .....|..++|+||+||+..+.+|.+.. .++..++|.++++. .+|+++|+
T Consensus 2 DP-~~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~~-~~g~yy~y 79 (274)
T cd08990 2 DP-AAHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVVE-KNGKYYLY 79 (274)
T ss_pred CC-CcEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEEE-ECCEEEEE
Confidence 89 577899999999987755432 3345699999999999999999887543 36778999999886 58999999
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~l 214 (511)
|++......+.+++|+|++.. -.|++....|++... . ......||.+ |.+++|++||++++. .+....
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~--~--~~~~~iDp~v-f~d~dG~~yl~~~~~---~~~~~~ 147 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTP--S--GGWYSIDPAV-FIDDDGQAYLYWGGG---LGLRVA 147 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccC--C--CCCCccCCcE-EECCCCCEEEEECCc---CCEEEE
Confidence 999754445678899998753 358876555555322 1 2345789995 555689999999864 233334
Q ss_pred EEcCCCCCcEEccccccc-----CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 215 YRSKDFVHWIKAKHPLHS-----VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~-----~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
-.|+|+.+|+.....+.. ....+..|+|.+|+.+ | +++|++|........|.+.
T Consensus 148 ~l~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 148 KLKPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRN--G-------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred EeCccccccCCCcEEEEeccccCCCCCCcccceeEEEEC--C-------------EEEEEEECCCCcEEEEEEc
Confidence 458899999743322321 1234578999999997 6 8999999765445555544
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.69 E-value=1.4e-15 Score=151.14 Aligned_cols=190 Identities=22% Similarity=0.265 Sum_probs=130.8
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeEEEcCCCceEEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSATILPGEKPAIFY 135 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsav~~~dg~~~l~Y 135 (511)
|| .+++++|+|+||+..... ....++.++|+||++|+..+.+|. +....+..++|.++++.. +|+++|+|
T Consensus 2 DP-~v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~~-~g~yyl~y 75 (271)
T cd08978 2 DP-YILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIYY-EGKYYLYY 75 (271)
T ss_pred CC-cEEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEEE-CCEEEEEE
Confidence 89 578899999999997643 234689999999999999998875 444556688999999874 79999999
Q ss_pred eccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--CccEE
Q 010428 136 TGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGLA 212 (511)
Q Consensus 136 Tg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--~~G~i 212 (511)
++... ...+.+++|+|+|. ..|.+... ...+ . ......+||.+ |.+++|++||++++... +.+.|
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~--~-~~~~~~iDp~v-f~d~dg~~yl~~~~~~~~~~~~~i 143 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPP--T-SNNGNSIDPTV-FKDDDGKYYLYYGSGDPGAGFGGI 143 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcC--c-cCCCCccCcce-EEcCCCCEEEEEecccCCCCCCcE
Confidence 99753 24567889998876 34444321 1111 1 12245789996 45467999999987642 24568
Q ss_pred EEEEcCCCCCcEEccccc---ccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 213 ILYRSKDFVHWIKAKHPL---HSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 213 ~ly~S~Dl~~W~~~~~~l---~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
.++++++...|.. +.+. .......+.|+|.+|+.+ | +|+|++|........|.++
T Consensus 144 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 144 YISELTDDLTKPT-GPPVLSASSGNNNAVTEGPTIFKKN--G-------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEEEECccccccc-CCceeeeeeccCCCceEccEEEEEC--C-------------EEEEEEEeCCCCCCCceEE
Confidence 8888876555432 2221 111234589999999997 6 8899888754322345554
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.67 E-value=6.8e-15 Score=149.24 Aligned_cols=180 Identities=18% Similarity=0.188 Sum_probs=126.0
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC-CccCCCeEeeeEEEcCCCceEEEEecc
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPAIFYTGI 138 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~-~~D~~g~~SGsav~~~dg~~~l~YTg~ 138 (511)
|| .+++++|+|+||+..... ...+..++|+||+||+.++.++.+.. .++..++|.++++. .+|+++|+|++.
T Consensus 2 DP-~v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DP-FVLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CC-eEEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 89 578899999999886543 23588999999999999998887654 36778999999887 489999999997
Q ss_pred CCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC---ccEEEE
Q 010428 139 DPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR---KGLAIL 214 (511)
Q Consensus 139 ~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~---~G~i~l 214 (511)
... ..+.+++|+|+|.. -.|++... +.+.. + ...+||.++ .+++|+|||+++..... .+....
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~-~~~~~----~---~~~iD~~vf-~d~dG~~yl~~~~~~~~~~~~~i~~~ 141 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKK-PPIDF----E---PKSIDAHPF-IDDDGKPYLYYSRNNYGNRVSDIYGT 141 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCC-CcccC----C---CcccCCceE-ECCCCCEEEEEEecCCCCcccceEEE
Confidence 543 55788999998753 34776432 22221 1 246799954 44679999999865422 233344
Q ss_pred EEcCCCCCcEEcc----cccccC--------------CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 215 YRSKDFVHWIKAK----HPLHSV--------------KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 215 y~S~Dl~~W~~~~----~~l~~~--------------~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
--|.|+.+|.... .++..+ ....+.|+|.+++.+ | +|+|++|...
T Consensus 142 ~l~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~--g-------------~yyl~ys~~~ 204 (294)
T cd08991 142 ELVDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHN--G-------------RYYLTYSANH 204 (294)
T ss_pred EEccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEEC--C-------------EEEEEEECCC
Confidence 4588887775211 111110 123489999999997 6 8889888643
No 19
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.62 E-value=1.5e-14 Score=149.44 Aligned_cols=178 Identities=18% Similarity=0.269 Sum_probs=127.4
Q ss_pred CccccccCCCCC-ccCCcceEEECCEEEEEeeeCCC-----------CC--CCCCcEEEEEEeCCCCcceecCCCCCCC-
Q 010428 46 RTGYHFQPPKNW-INDPNGVMIYKGIYHLFYQYNPK-----------GA--VWGNIVWAHSTSKDLINWIPHDPAIYPS- 110 (511)
Q Consensus 46 Rp~yHf~p~~gw-~NDPnG~~~~~G~YHLFYQ~~P~-----------~~--~~g~~~WgHa~S~DLvhW~~~~~aL~P~- 110 (511)
.|..=+.+..+. ..||..+++.+|+|||||++... .+ .|....++||+|+||+||++.+++|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 445545555553 45998899999999999996532 11 2456789999999999999999888754
Q ss_pred -CCccCCCeEeeeEEEcCCCceEEEEeccCCC----CcceEEEEEecCCCCcccceeeecCCCceecCCCC---------
Q 010428 111 -QQSDINGCWSGSATILPGEKPAIFYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM--------- 176 (511)
Q Consensus 111 -~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~--------- 176 (511)
..||..++|.++++. .+|+++|+|++.... ..+.+++|+|++.. -.|++. .+||+.+...
T Consensus 104 ~g~Wd~~~vwaP~Vi~-~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVLE-HEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEEE-ECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 358999999999875 599999999975421 23578999998763 249885 6899854310
Q ss_pred -------CcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--------CccEEEEEEcCCCC-CcEEcc-cccc
Q 010428 177 -------NQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--------RKGLAILYRSKDFV-HWIKAK-HPLH 231 (511)
Q Consensus 177 -------~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--------~~G~i~ly~S~Dl~-~W~~~~-~~l~ 231 (511)
..++...+.||.|+ + .+|+|||++.+... ..-++.|+.|++.. -|+... .|+.
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~-~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r~~~nPi~ 247 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLF-P-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVKSPYNPIT 247 (349)
T ss_pred eeEeccCCCcccCceECCEEE-E-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEeCCCCccc
Confidence 11445567899964 4 48999999966431 12358899999876 687643 3554
No 20
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.61 E-value=4e-14 Score=143.44 Aligned_cols=179 Identities=21% Similarity=0.234 Sum_probs=122.9
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCc
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEK 130 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-------~D~~g~~SGsav~~~dg~ 130 (511)
+.|| .+++++|+|+||+... ++++++|+||+||++.+.+|.+... .+..++|.++++. .+|+
T Consensus 1 ~~DP-~v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDP-SIIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCC-eEEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 4699 5889999999999864 6899999999999999988865432 3457899999876 4999
Q ss_pred eEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 131 PAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 131 ~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
++|+|++.... ....+++|+|++.. ...|++. +||+... .+......+||.+ |.+++|++||++++...
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~~---~gpw~~~--~~v~~~~--~~~~~~~~iDp~v-f~d~dG~~Yl~~~~~~~-- 139 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTLP---DGPWTDH--GIVIESG--PGRDDPNAIDPNV-FYDEDGKLWLSFGSFWG-- 139 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCCC---CCCCEEc--ceeeecC--CCCCCcccccCCE-EEcCCCCEEEEeeeccC--
Confidence 99999987543 45667899998750 1468874 5888543 2212345789996 45468999999986431
Q ss_pred cEEEEEE-cCC---CCCcEEcccccccCC-CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 210 GLAILYR-SKD---FVHWIKAKHPLHSVK-GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 210 G~i~ly~-S~D---l~~W~~~~~~l~~~~-~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| +.+.+ +.| ...|......+...+ ..+..|-|.+|+.+ | +++|++|..
T Consensus 140 ~-i~~~~l~~~~~~~~~~~~~~~~i~~~~~~~~~~Egp~~~k~~--g-------------~YYl~~S~~ 192 (288)
T cd08998 140 G-IFLVELDPKTGKPLYPGGYGYNIAGRPRGHGAIEAPYIIYRG--G-------------YYYLFVSYG 192 (288)
T ss_pred C-EEEEEeCcccCCccCCCCcceEEeccCCCCCceeeeEEEEeC--C-------------EEEEEEEcc
Confidence 2 33333 222 123321111111111 23468999999997 6 888888854
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.58 E-value=1.1e-13 Score=140.78 Aligned_cols=169 Identities=20% Similarity=0.271 Sum_probs=118.5
Q ss_pred ccCCcceEEE--CCEEEEEeeeC----CCC-CCCC-CcEEEEEEeCC-CCcceecCCCCCCCCCccCCCeEeeeEEEcCC
Q 010428 58 INDPNGVMIY--KGIYHLFYQYN----PKG-AVWG-NIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPG 128 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~----P~~-~~~g-~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~d 128 (511)
.-|| .+++. +|+|||||... |.. ..|. ...+|+|+|+| |+||++++.++.++..++...+|.+.++. .+
T Consensus 11 ~~DP-~i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADP-TIIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCC-EEEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 7899 57786 88999999521 111 1233 35799999999 99999998777664455667799999986 48
Q ss_pred CceEEEEeccCC-----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010428 129 EKPAIFYTGIDP-----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (511)
Q Consensus 129 g~~~l~YTg~~~-----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~g 203 (511)
|+++|||+.... ......++|+|+| +.+|++.+ ++.... ....||.| ++..+|+|+|++.
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~~-------~~~iD~~v-f~~~dg~~yl~y~ 153 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLDS-------DRVIDACV-FKLPDGRWRMWYK 153 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccCC-------CCcEEeEE-EEeCCCEEEEEEE
Confidence 999999997532 1345678888887 37898753 332111 23579985 4446799999996
Q ss_pred eecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 204 SKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 204 a~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.... ...+.+..|+|+.+|+..+..+ . ...-|.|.+|+.+
T Consensus 154 ~~~~-~~~~~~a~s~D~~~w~~~~~~i-~---~~~~EgP~v~k~~ 193 (294)
T cd08984 154 DERR-GSTTYAADSEDLYHWTVEGPVL-G---DRPHEGPNVFRWK 193 (294)
T ss_pred CCCC-CeEEEEEECCCCCEEEeCCccc-c---CCCCCCCCeeEEC
Confidence 5322 2245778899999999754332 2 1234999999987
No 22
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.51 E-value=1.4e-12 Score=130.98 Aligned_cols=189 Identities=16% Similarity=0.105 Sum_probs=130.2
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC----CccCCCeEeeeEEEcC-CCceEEE
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ----QSDINGCWSGSATILP-GEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~----~~D~~g~~SGsav~~~-dg~~~l~ 134 (511)
|| ++++++|+|++|-.....+.. ....|-..+|+||+||+.++.+|.+.. .+...++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 56 688999999999887643211 134588899999999999999998764 3445678999998643 6899999
Q ss_pred EeccCC-CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 135 YTGIDP-HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 135 YTg~~~-~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
|++.+. .....+++|+|++..+ .|+... .+. + . ....|||.+ |.++||++||++++..+ ..+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~G----pf~~~~-~~~---~--~---~~~~~Dp~v-f~DdDG~~Yl~~~~~~~--~~i~ 146 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPTG----PYTYLG-SFR---P--L---GYQSRDFGL-FVDDDGTAYLLYSDRDN--SDLY 146 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCCC----CCEECC-ccC---C--C---CCCccCCce-EEcCCCCEEEEEecCCC--CceE
Confidence 998653 2446789999987643 355432 221 1 1 134799996 45578999999997532 2355
Q ss_pred EEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC---CceeEEEEEE
Q 010428 214 LYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD---TKHEYYTVGT 284 (511)
Q Consensus 214 ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~---~~~~~Y~iG~ 284 (511)
+++ ++|+..+.. .+.. .......|||.+|+.+ | +|+|+.|... .....|++.+
T Consensus 147 i~~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~--g-------------~YYL~~S~~t~~~~~~~~y~~s~ 203 (265)
T cd08985 147 IYRLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRN--G-------------KYYLLTSGLTGWNPNDARYATAT 203 (265)
T ss_pred EEEeCCCcccccc--eEEE-ccCCCccccceEEEEC--C-------------EEEEEEccCCCccCCceEEEEec
Confidence 665 568777752 2221 1224579999999998 6 8999988642 2345676664
No 23
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.46 E-value=3.8e-12 Score=129.06 Aligned_cols=178 Identities=18% Similarity=0.167 Sum_probs=118.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC--c----cCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ--S----DINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~--~----D~~g~~SGsav~~~dg 129 (511)
+.+-||. +++++|+|+||...... ...+..++|+||+||+.++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4677995 88899999998532211 135889999999999999988854321 1 346799999986 499
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-- 207 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-- 207 (511)
++||+|++........+++|++++..+ .|+. |++.. ...+||.++ .+++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~g----pw~~----~~~~~--------~~~iDp~vf-~d~dG~~Y~~~~~~~~~~ 141 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPAG----PWSD----PVWLD--------SGGIDPSLF-FDDDGKVYLVGNGWDERR 141 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCCC----CCcC----CEecC--------CCccCCcee-EcCCCCEEEEecccCCcc
Confidence 999999987543344677888877643 3542 33211 146899964 4478999999886432
Q ss_pred ---CccEEEEEEcCCCCCcEEcccc--cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 208 ---RKGLAILYRSKDFVHWIKAKHP--LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 208 ---~~G~i~ly~S~Dl~~W~~~~~~--l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+.+.|.+.+. |...|+..+.+ +.........|+|.+|+.+ | +++|++|..
T Consensus 142 ~~~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~--g-------------~YYl~ys~~ 196 (288)
T cd09000 142 GYNGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRD--G-------------WYYLLIAEG 196 (288)
T ss_pred ccCCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEEC--C-------------EEEEEEecC
Confidence 1234555553 23344433332 2222223578999999987 6 888888754
No 24
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.44 E-value=8.7e-12 Score=128.11 Aligned_cols=187 Identities=13% Similarity=0.254 Sum_probs=125.2
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCC---------CCCCcEEEEEEeCCCCcceecCCCCCCC--CCccCCCeEeeeEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGA---------VWGNIVWAHSTSKDLINWIPHDPAIYPS--QQSDINGCWSGSAT 124 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~---------~~g~~~WgHa~S~DLvhW~~~~~aL~P~--~~~D~~g~~SGsav 124 (511)
.+..||. ++.++|+|+||....-... .+....+-..+|+||+||+.++.+|.|. ..|. .++|.++++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w~-~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKWA-GNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCcc-cccCCCceE
Confidence 4668995 6789999999998754321 1223467889999999999999988742 3443 478999987
Q ss_pred EcCC----CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCC-CCCCEEEEeCCCCeEE
Q 010428 125 ILPG----EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSS-FRDPTTAWLGPDKRWR 199 (511)
Q Consensus 125 ~~~d----g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~-fRDP~vvw~~~~g~w~ 199 (511)
. .+ |++||+|+.. ...+++|+|++..+ .|+...+.|++.... ++..... -.||.+ |.++||++|
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~G----P~~~~~g~~l~~~~~-~~~~~~~~~iDp~~-f~DdDG~~Y 153 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPVG----PWTDPLGKPLITGST-PGCAGVVWLFDPAV-FVDDDGQGY 153 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCCC----CcccCCCCeeecCCC-CCccCCccccCCCe-EECCCCCEE
Confidence 6 46 9999999854 23578999887643 588754567774310 1211112 369995 455799999
Q ss_pred EEEeeecC-----CccEEEEEE-cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 200 VIIGSKIN-----RKGLAILYR-SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 200 m~~ga~~~-----~~G~i~ly~-S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
|++++... ..+.+.+.+ ++|+..-. +++..- .....+|.|.+++.+ | +++|.+|..
T Consensus 154 l~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~i-~~~~~~Egp~~~K~~--G-------------~YYL~ys~~ 215 (311)
T cd09003 154 LYFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVTI-DAPYFFEASGLHKIN--G-------------TYYYSYCTN 215 (311)
T ss_pred EEECCccCCCccccCCCEEEEEeCCCceecc--CCceEc-cCCCceEeeeEEEEC--C-------------EEEEEEeCC
Confidence 99986421 123456665 55765432 222111 112579999999997 6 888988854
No 25
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.40 E-value=1.6e-11 Score=123.40 Aligned_cols=183 Identities=20% Similarity=0.245 Sum_probs=126.4
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCcc--CCCe-EeeeEEEcCCCceE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSD--INGC-WSGSATILPGEKPA 132 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D--~~g~-~SGsav~~~dg~~~ 132 (511)
+..-|| -+++++|.|+||+...+.. ..+..++|+||+||+..+.+|.+....+ ..+. |.+.++. .+|+++
T Consensus 8 ~~~~DP-~i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yy 80 (286)
T PF04616_consen 8 GDYADP-SIVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHY-INGKYY 80 (286)
T ss_dssp SSECSE-EEEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEEE-ETTEEE
T ss_pred CCCCCC-EEEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEEE-cCCeEE
Confidence 566799 5888999999999876543 3588999999999999997776654333 2333 9999876 599999
Q ss_pred EEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC--cc
Q 010428 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR--KG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~--~G 210 (511)
|+|+.........+++|++++.. -.|+... .+.+. .....||.++ .+++|++||+.+..... .+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~--------~~~~iD~~vf-~d~dG~~Yl~~~~~~~~~~~~ 146 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP--------GGNSIDPSVF-VDDDGKYYLYYGSWDNGDPGG 146 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE--------SSSSSSEEEE-EETTSEEEEEEEESTTTSSEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec--------cccccCceEE-EecCCCcEEeCcccCCCccce
Confidence 99993322345668899998764 3577642 12211 1235799965 44679999999986532 34
Q ss_pred EEEEEE-cCCCCCcEEcc-cccccC---CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 211 LAILYR-SKDFVHWIKAK-HPLHSV---KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 211 ~i~ly~-S~Dl~~W~~~~-~~l~~~---~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.|.+.+ +.|...+.... ..+... ......|+|.+|+.+ | +++|++|...
T Consensus 147 ~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~--g-------------~yYl~~s~~~ 200 (286)
T PF04616_consen 147 GIYIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHG--G-------------KYYLFYSAGG 200 (286)
T ss_dssp EEEEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEET--T-------------EEEEEEEESG
T ss_pred eEEeecccCccccccCcccccccccccccCCccccceEEEEcC--C-------------CEEEEEeccC
Confidence 566666 56776665433 122221 235689999999997 6 8889988643
No 26
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.40 E-value=1.9e-12 Score=133.00 Aligned_cols=163 Identities=20% Similarity=0.339 Sum_probs=113.5
Q ss_pred CCcceEEECCE--EEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC-CCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGI--YHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD-PAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~--YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~-~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.| |++.++|. |||.|...-. ..+..+.|.|.|+|.+||+..+ ++|.|+..++..||....++.. +|+++|+||
T Consensus 34 Np-gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~i-~d~yymtYt 109 (312)
T PF04041_consen 34 NP-GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTKI-DDTYYMTYT 109 (312)
T ss_dssp EE-EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEEE-TTEEEEEEE
T ss_pred cC-cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEEE-CCEEEEEEE
Confidence 46 77767766 8999876532 2233589999999999999874 7899999999999999999875 889999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCC-CcCCCCCCCCCEEEEeC-CCCeEEEEEeeecCCccEEEE
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAM-NQINTSSFRDPTTAWLG-PDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~-~~~~~~~fRDP~vvw~~-~~g~w~m~~ga~~~~~G~i~l 214 (511)
+.+. ....+++|+|+|. .+|+|.. +++..... .......-+|-. +|.+ .+|+|+|+.+ .+.|.+
T Consensus 110 a~~~-~~~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~-lfp~ki~Gky~m~~r-----~~~i~l 175 (312)
T PF04041_consen 110 AYSG-KGPRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGA-LFPEKINGKYAMLHR-----DPSIWL 175 (312)
T ss_dssp EEES-SSEEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCE-EEESEETTEEEEEEE-----SSSBEE
T ss_pred EecC-CCcccceEEccch-----HhhEEec--cccCcccccccccccccCceE-EEEEEECCEEEEEEC-----CCCEEE
Confidence 9874 4467899999984 8999974 33322100 011111225654 4443 3899999998 356899
Q ss_pred EEcCCCCCcEEcccccccCCCCCceec
Q 010428 215 YRSKDFVHWIKAKHPLHSVKGTGMWEC 241 (511)
Q Consensus 215 y~S~Dl~~W~~~~~~l~~~~~~g~wEC 241 (511)
..|+|+++|+....++.. ...++||+
T Consensus 176 a~S~Dl~~W~~~~~~~~~-~~~~~~d~ 201 (312)
T PF04041_consen 176 AYSPDLIHWGNHREPLLS-PRPGWWDS 201 (312)
T ss_dssp EEESSSSSEEEEBETSB---STTSSCS
T ss_pred EecCCccccccccccccc-CCCCcChh
Confidence 999999999876554443 23456777
No 27
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.39 E-value=4.9e-11 Score=120.58 Aligned_cols=184 Identities=15% Similarity=0.114 Sum_probs=121.7
Q ss_pred CCCccCCcceEEE--CCEEEEEeeeCCCCCCC-CCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcC-CCc
Q 010428 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVW-GNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILP-GEK 130 (511)
Q Consensus 55 ~gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~-g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~-dg~ 130 (511)
.+-+.||. +++. +|+||||+.-.-....+ +...+.+++|+||+||+..+.++.... ...++|.+.++.++ +|+
T Consensus 15 ~~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~ 91 (276)
T cd08983 15 TKGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQ 91 (276)
T ss_pred CCCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCe
Confidence 35577994 6676 89999999865322212 356799999999999999887642211 23678999998754 689
Q ss_pred eEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 131 PAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 131 ~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
++|+|+..... ....+.+.++.. .| +.+|++. .|++.+. ....|+.+ ++ .+|+|||++....
T Consensus 92 y~~~~s~~~~~~~~~~~~~~i~~~tt-~D--f~tft~p--~~~~~~~-------~~~ID~~v-~~-~~g~~Yl~~k~~~- 156 (276)
T cd08983 92 YVVYWSSRLYDNTGGFYNYRLYATTT-SD--FVTFTEP--KVWIDLG-------ANVIDTTV-VK-VGGTYYRFYKNEG- 156 (276)
T ss_pred EEEEEecccCCCCCCCccEEEEEEec-Cc--ccccCCC--eEeecCC-------CCeEeeEE-EE-eCCEEEEEEecCC-
Confidence 99999986542 122333333321 11 3688752 4666422 24689985 45 3599999997543
Q ss_pred CccEEEEEEcCCCC-CcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEee
Q 010428 208 RKGLAILYRSKDFV-HWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSL 272 (511)
Q Consensus 208 ~~G~i~ly~S~Dl~-~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~ 272 (511)
...|.+.+|++|. .|+...... .......|-|.+|+.+..| +|+|+++.
T Consensus 157 -~~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~~-------------~y~L~~d~ 206 (276)
T cd08983 157 -SKDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNGG-------------GWYLYGDN 206 (276)
T ss_pred -CCcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCCC-------------EEEEEEEE
Confidence 2457888999987 787654321 1223478999999998322 78887754
No 28
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=99.35 E-value=6.9e-11 Score=119.52 Aligned_cols=180 Identities=19% Similarity=0.218 Sum_probs=117.3
Q ss_pred cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc-------cCCCeEeeeEEEcCCCce
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS-------DINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~-------D~~g~~SGsav~~~dg~~ 131 (511)
.|| .++.++|+|+||.... .+..++|+||+||+..+.+|.+...+ ...++|.+.++. .+|++
T Consensus 1 ~DP-~vi~~~~~YY~~~T~~---------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G~y 69 (279)
T cd08988 1 HDP-VIIKEGDTWYVFGTGP---------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIYQ-HNGKF 69 (279)
T ss_pred CCC-EEEEECCEEEEEEecC---------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEEE-ECCEE
Confidence 389 5788999999997642 37789999999999999888643322 235799999876 58999
Q ss_pred EEEEeccCC-CCcceEEEEEecCCCCccc-ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 132 AIFYTGIDP-HNRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 132 ~l~YTg~~~-~~~q~q~lA~s~d~~d~~l-~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
+|+|++... .....+++|+|++..+|+- ..|++ ..+++... .. ....-.||.+++ ++||++||+.|+.. .
T Consensus 70 ylyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~--~~-~~~~~iDp~~f~-DdDG~~Yl~~g~~~--~ 141 (279)
T cd08988 70 YLYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSD--AS-DNYNAIDPAIIF-DQHGQPWLSFGSFW--G 141 (279)
T ss_pred EEEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecC--CC-CCCCccCCceEE-cCCCCEEEEecccC--C
Confidence 999998643 2346788999988765531 12443 24666432 11 112347998654 47899999998632 2
Q ss_pred cEEEEEE-cCCCCCcEEccc--ccccC-CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 210 GLAILYR-SKDFVHWIKAKH--PLHSV-KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~--~l~~~-~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| |.+.+ +.|...-...+. .+... ......|-|-+++.+ | +++|..|..
T Consensus 142 g-i~~~eL~~d~~~~~~~~~~~~i~~~~~~~~~~Egp~i~k~~--g-------------~YYl~~S~g 193 (279)
T cd08988 142 G-IKLFELDKDTMKPAEPGELHSIAGRERSSAAIEAPFILYRG--D-------------YYYLFVSFG 193 (279)
T ss_pred C-EEEEEECcccCCccCCCcceEEeccCCCCCceEeeEEEEcC--C-------------eEEEEEEcC
Confidence 2 44444 555443210111 11111 123468999999987 6 888888764
No 29
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.34 E-value=8.6e-11 Score=119.67 Aligned_cols=151 Identities=20% Similarity=0.225 Sum_probs=100.0
Q ss_pred CCccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCC-CccCCCeEeeeEEEcCCCceE
Q 010428 56 NWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQ-QSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 56 gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~-~~D~~g~~SGsav~~~dg~~~ 132 (511)
.++-||. ++++ +|+||||..............+...+|+||+||+..+.++.+.. .+...++|.+.++. .+|++|
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~-~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHE-YKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeee-eCCEEE
Confidence 4578995 7777 99999999865332111123589999999999999998886543 34456799999875 599999
Q ss_pred EEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--CCc
Q 010428 133 IFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NRK 209 (511)
Q Consensus 133 l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--~~~ 209 (511)
|+|+..... ....+++|++++..+ .|+.....|+.... ....||.+ |.++||++||+++..- ...
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~G----P~~~~~~~~~~~~~-------~~~iDp~~-f~DdDG~~Yl~~~~~~~~~~~ 149 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPEG----PFVPHSDGPVTPED-------WMCLDGTL-YVDEDGKPWMVFCHEWVQVYD 149 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCCC----CCEeCCCCccCCCC-------CceEcCce-EEcCCCCEEEEEEecccccCC
Confidence 999876432 223567888877643 47654333443211 13579985 5557899999987421 112
Q ss_pred cEEEEEE-cCCC
Q 010428 210 GLAILYR-SKDF 220 (511)
Q Consensus 210 G~i~ly~-S~Dl 220 (511)
|.|.+.+ +.|.
T Consensus 150 ~~i~~~eL~~d~ 161 (291)
T cd08981 150 GTIEAVRLSPDL 161 (291)
T ss_pred CCEEEEEeCCCc
Confidence 3354444 4554
No 30
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.32 E-value=3.3e-11 Score=120.12 Aligned_cols=137 Identities=21% Similarity=0.297 Sum_probs=98.5
Q ss_pred CCccCCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC-------CCCCccCCCeEeeeEEEcC
Q 010428 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY-------PSQQSDINGCWSGSATILP 127 (511)
Q Consensus 56 gw~NDPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~-------P~~~~D~~g~~SGsav~~~ 127 (511)
+.+.||. +++.+ |+|||||+..... ......+++|+|+|+++|+..+..+. +...++...+.++.++..+
T Consensus 64 ~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~ 141 (276)
T cd08979 64 GGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDE 141 (276)
T ss_pred CCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCcceeeeecCCCCCcccccccccEEEEEC
Confidence 4567895 66777 9999999977532 23457899999999999999876542 2233445667889988754
Q ss_pred C-CceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 128 G-EKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 128 d-g~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+ |+++|+|++........+.+|.|+|. .+|++....+.+. .+.....+++|.+ ++ .+|+|+|++++.
T Consensus 142 ~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~~~~----~~~~~~~~e~P~~-~~-~~g~~~l~~~~~ 209 (276)
T cd08979 142 EGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPPGPR----TGYDDGQLEVPQV-VK-IDGRWYLLYSGR 209 (276)
T ss_pred CCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCCCCC----CcccCCcCccceE-EE-ECCEEEEEEEec
Confidence 3 89999999875445567889999884 7999864332121 2223456889995 55 469999999876
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.28 E-value=2e-10 Score=118.89 Aligned_cols=169 Identities=19% Similarity=0.226 Sum_probs=114.6
Q ss_pred cCCcceEEECCEEEEEeeeCCCC-CCCCCcEEEEEEeCCCC-cceecC-CCCCCCC------------------CccCCC
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKG-AVWGNIVWAHSTSKDLI-NWIPHD-PAIYPSQ------------------QSDING 117 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~-~~~g~~~WgHa~S~DLv-hW~~~~-~aL~P~~------------------~~D~~g 117 (511)
..| .+++++|+|||||+..-.. ..-...+.|.|+|+|.. .|+++. ++|.|.. .||..+
T Consensus 113 waP-~Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~Pil~p~~dg~w~~d~~~~~~~~~~g~wD~~~ 191 (349)
T cd08992 113 FTP-EVLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEPILSPSNDGIWKGDEDNRFLVKKKGSFDSHK 191 (349)
T ss_pred ECc-EEEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCcEecCCcCCceeeccCceeEeccCCCcccCc
Confidence 457 4778999999999954211 11123578888888876 699774 5566642 367778
Q ss_pred eEeeeEEEcCCCceEEEEeccCC-------CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEE
Q 010428 118 CWSGSATILPGEKPAIFYTGIDP-------HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTA 190 (511)
Q Consensus 118 ~~SGsav~~~dg~~~l~YTg~~~-------~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vv 190 (511)
+...+++. .+|+++|||+|+.. ...+.+++|+|++..+| |+|.+.|||+... + ..+ |
T Consensus 192 v~~P~v~~-~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GP----f~r~~~nPi~~~~--------~--~~~-~ 255 (349)
T cd08992 192 VHDPCLFP-FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGP----YVKSPYNPITNSG--------H--ETC-V 255 (349)
T ss_pred eECCEEEE-ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCC----CEeCCCCcccCCC--------C--ceE-E
Confidence 88888765 59999999999753 23567999999987654 8898889998533 1 125 7
Q ss_pred EeCCCCeE-EEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 191 WLGPDKRW-RVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 191 w~~~~g~w-~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
|+. .+.+ .|+..- ..+.|. +..|+|.++|+....+-..+...|..+|||-+.-.
T Consensus 256 ~~~-~~~~~~~~~~d-~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (349)
T cd08992 256 WQY-KGGIAAMLTTD-GPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRRPDADEDP 310 (349)
T ss_pred Eec-CCceEEEEecc-CCCCce--EEeCCCCccEEEeeeccCCCccccCccCcccccCC
Confidence 984 4556 555433 233454 67899999999765432223345667777776654
No 32
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=99.25 E-value=4.3e-10 Score=113.21 Aligned_cols=174 Identities=17% Similarity=0.185 Sum_probs=113.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCc------cCCCeEeeeEEEcCCC
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQS------DINGCWSGSATILPGE 129 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~------D~~g~~SGsav~~~dg 129 (511)
+..-|| .+++++|+|+||+..... ...+...+|+||+||+..+.++...... ...++|.+.++. .+|
T Consensus 6 ~~~~DP-~ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~G 78 (269)
T cd08989 6 GDNPDP-SIIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLSY-YDG 78 (269)
T ss_pred CCCCCC-cEEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEEE-ECC
Confidence 556799 578899999999864321 1135678999999999998877543211 235799999876 599
Q ss_pred ceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCc
Q 010428 130 KPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRK 209 (511)
Q Consensus 130 ~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~ 209 (511)
+++|+|+.........+++|++++..+| |+. |+... ..-.||.+ |.++||+.||+.+..
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~Gp----w~~----~~~~~--------~~~IDp~~-f~D~dG~~Yl~~~~~---- 137 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDITGP----WSR----PIFLN--------YGGFDPSL-FHDDDGKKYLINMGW---- 137 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCCCC----CcC----CEECC--------CCcccCce-EEcCCCCEEEEecCC----
Confidence 9999999864434456889998776433 542 43321 13479985 455799999998753
Q ss_pred cEEEEEE-cCCCCCcEEcccc----cccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 210 GLAILYR-SKDFVHWIKAKHP----LHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 210 G~i~ly~-S~Dl~~W~~~~~~----l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
+.|.+.+ +.|...= .+.+ +.........|-|-+++.+ | +++|++|...
T Consensus 138 ~~i~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~Egp~~~k~~--G-------------~YYl~~S~~~ 190 (269)
T cd08989 138 SGIRLQEYSPAEKKL--IGKPLNKVIIKGTDDGLTEGPHLYKIN--G-------------KYYLTTAEGG 190 (269)
T ss_pred CcEEEEEEChhhCCC--CCCceeEEEecCCCCCccccceEEEEC--C-------------EEEEEEeeCC
Confidence 2244544 3332210 1111 1111123478999999987 6 8888888654
No 33
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.19 E-value=1e-09 Score=110.40 Aligned_cols=169 Identities=15% Similarity=0.087 Sum_probs=112.0
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCC-----------ccCCCeEeeeEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQ-----------SDINGCWSGSAT 124 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~-----------~D~~g~~SGsav 124 (511)
++.-|| .+++++|+|+||....-. ...+...+|+||+||+..+.++..... .-..++|.+.++
T Consensus 9 ~~~~DP-~v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDP-DVIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCC-eEEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 556799 578899999999864311 123667899999999999877643211 112579999987
Q ss_pred EcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 125 ILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 125 ~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
.. +|+++|+|+... ..+.+|++++..+ .|+.. +++ ....||.++ .+++|+.||+.+.
T Consensus 83 ~~-~gkyy~yys~~~----~~~~v~~a~~p~G----pw~~~--~~~-----------~~~iDp~~f-~D~dG~~Yl~~~~ 139 (269)
T cd09001 83 YH-NGTFYVFFCTNT----GGTYIYTADDPEG----PWTKT--ALD-----------GGYHDPSLL-FDDDGTAYLVYGG 139 (269)
T ss_pred EE-CCEEEEEEEecC----CCeEEEEcCCCCC----CCcCC--CcC-----------CCcccCceE-EcCCCCEEEEeCC
Confidence 64 999999999862 3578888876532 35432 111 135799954 4578999999975
Q ss_pred ecCCccEEEEEE-cCCCCCcEEcccccccCC--CCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 205 KINRKGLAILYR-SKDFVHWIKAKHPLHSVK--GTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 205 ~~~~~G~i~ly~-S~Dl~~W~~~~~~l~~~~--~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
. .+.+.+ +.|+....-....+.... .....|-|.+++-+ | +++|++|..
T Consensus 140 ~-----~i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~--G-------------~YYl~~S~~ 191 (269)
T cd09001 140 G-----TIRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKIN--G-------------YYYIFNIAW 191 (269)
T ss_pred C-----cEEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEEC--C-------------EEEEEEecC
Confidence 3 345555 677766521111122221 13578999999876 6 888888865
No 34
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.17 E-value=1.2e-09 Score=109.91 Aligned_cols=177 Identities=18% Similarity=0.115 Sum_probs=111.7
Q ss_pred CccCCcceEEE-CCEEEEEeeeCCCCCC-----CCCcEEEEEEeCCCCcceecCCCCCCCCC------------ccCCCe
Q 010428 57 WINDPNGVMIY-KGIYHLFYQYNPKGAV-----WGNIVWAHSTSKDLINWIPHDPAIYPSQQ------------SDINGC 118 (511)
Q Consensus 57 w~NDPnG~~~~-~G~YHLFYQ~~P~~~~-----~g~~~WgHa~S~DLvhW~~~~~aL~P~~~------------~D~~g~ 118 (511)
||-||. ++.. +|+|+|+......+.. ......-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688995 5555 6799999885432210 01235678999999999999887754321 234679
Q ss_pred EeeeEEEcCCCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe
Q 010428 119 WSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR 197 (511)
Q Consensus 119 ~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~ 197 (511)
|.+.+.. .+|+++|+|+..... ....+++|++++..+ .|+....+ .+ . ..-.||.+ +.++||+
T Consensus 80 WAP~v~~-~~g~yyl~~s~~~~~~~~~~i~va~a~~p~G----p~~~~~~~----~~---~---~~~iD~~~-f~D~DG~ 143 (269)
T cd08986 80 WAPELHY-IKGRWYLVACMNNPGYGGSSILLSTSGKIEG----PYKHITGN----KP---L---FPGIDPSL-FEDDDGK 143 (269)
T ss_pred CCceEEE-ECCEEEEEEEccCCCCCceEEEEEeCCCCCC----CcEeccCC----CC---C---CCccCCce-EEcCCCC
Confidence 9999876 489999999976432 334567787766543 36653221 01 0 12469985 5557899
Q ss_pred EEEEEeeecCCccEEEEEEcCCCCCcEEcccc--cccC----CCCCceecCceEEeccCCCCCccccCCCCCceeEEEEe
Q 010428 198 WRVIIGSKINRKGLAILYRSKDFVHWIKAKHP--LHSV----KGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS 271 (511)
Q Consensus 198 w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~--l~~~----~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S 271 (511)
+||+.+... + .--+.|+.... +.+ +... ......|-|-+++.+ | +++|++|
T Consensus 144 ~Yl~~~~~~-----i-~~l~~d~~~~~--~~~~~~~~~~~~~~~~~~~EgP~i~k~~--G-------------~YYL~yS 200 (269)
T cd08986 144 VYLVWHNTL-----I-ARLKDDLSGLA--GDPVRIDPSPTFYKDEIGHEGAFVFKYG--G-------------KYYLFGT 200 (269)
T ss_pred EEEEeeCCc-----e-EeccCcccccc--CCcEEEecccccccCCccccccEEEEEC--C-------------EEEEEEe
Confidence 999987531 1 11255655432 221 1111 012357999999986 5 8899988
Q ss_pred eC
Q 010428 272 LD 273 (511)
Q Consensus 272 ~~ 273 (511)
..
T Consensus 201 ~~ 202 (269)
T cd08986 201 AW 202 (269)
T ss_pred ec
Confidence 64
No 35
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.10 E-value=4.7e-09 Score=106.43 Aligned_cols=188 Identities=14% Similarity=0.127 Sum_probs=119.3
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCC--CCCC-CccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAI--YPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL--~P~~-~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
|| -++.++++|+||+.-.. .....++|+||+||+.....+ .+.. .....++|.+.++. .+|+++|+|+
T Consensus 2 DP-~v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~~-~~g~yylyys 72 (288)
T cd08980 2 DP-WVIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELHY-IDGKWYIYFA 72 (288)
T ss_pred CC-eEEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEEE-ECCEEEEEEE
Confidence 89 47788999999987431 357889999999999875432 2222 13446899999876 5899999999
Q ss_pred ccCC--CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC---CccE
Q 010428 137 GIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN---RKGL 211 (511)
Q Consensus 137 g~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~---~~G~ 211 (511)
.... ...+.+++|.+++..++ +-.|+.. .+++... . ..-.||.+ +. ++|++||+++.... ....
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~--~----~~~iDp~~-~~-ddG~~Yl~~~~~~~~~~~~~~ 141 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT--D----RWAIDGTV-FE-HNGQLYFVWSGWEGRTNGNQN 141 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC--C----CeeeeeEE-EE-ECCEEEEEEEccCCCCCCCcc
Confidence 8653 24456778887652122 3568864 3444221 1 12369985 55 35999999876432 2234
Q ss_pred EEEEEcCCCCCcEEcccc--cccCCC------CCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeEEEEE
Q 010428 212 AILYRSKDFVHWIKAKHP--LHSVKG------TGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEYYTVG 283 (511)
Q Consensus 212 i~ly~S~Dl~~W~~~~~~--l~~~~~------~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~Y~iG 283 (511)
|.+.+.++...+. +++ +..+.. ....|-|.+++.+ | +++|.+|........|.+|
T Consensus 142 i~~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~--G-------------~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 142 LYIAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRN--G-------------KVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEEEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEEC--C-------------EEEEEEECCCCCCCCCEEE
Confidence 6666655543443 322 222111 1457999999997 6 8889888754434456665
Q ss_pred E
Q 010428 284 T 284 (511)
Q Consensus 284 ~ 284 (511)
-
T Consensus 205 ~ 205 (288)
T cd08980 205 L 205 (288)
T ss_pred E
Confidence 4
No 36
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=99.09 E-value=4.4e-09 Score=106.56 Aligned_cols=121 Identities=17% Similarity=0.205 Sum_probs=85.4
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
..-|| .+++.+|+|+|+..-.. ....+.-.+|+||+||+..+.++.+. ..++|.+.++. .+|+++|+|+
T Consensus 14 ~~~DP-~i~~~~~~yY~~~t~~~-----~~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~~-~~gkyy~yys 82 (280)
T cd09002 14 DYPDP-SILRDGEDYYMTHSSFK-----YTPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLCK-YDGRYYIYFP 82 (280)
T ss_pred CCCCC-EEEEECCEEEEEEcchh-----cCCCEEEEECCCcCCceEccccccCC----CCCEEcCeeEE-ECCEEEEEEE
Confidence 34599 58889999999765211 11247788999999999998877542 35799999875 6999999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
.........+.+|++++..+ .|++ |+.... ....||.+++ +++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~G----pw~~----~~~~~~-------~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPEG----PWSK----PIDLKI-------GGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCCC----CCcC----CEecCC-------CCccCCceEE-cCCCCEEEEECC
Confidence 87644456778898876543 3653 221111 1236999655 478999999864
No 37
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.04 E-value=3e-09 Score=106.80 Aligned_cols=100 Identities=13% Similarity=0.181 Sum_probs=75.6
Q ss_pred eeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 121 GSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 121 Gsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
..++. .+|+++|+|++...+....+++|+|+|+ ++|++.+ +|+|.++....++...++||.|+ + .+|+|||
T Consensus 3 P~v~~-~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~-~-~~g~y~m 73 (268)
T cd08993 3 PAVVY-DNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIV-K-IDDTYYI 73 (268)
T ss_pred CeEEE-ECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEE-E-ECCEEEE
Confidence 45655 5999999999876556678999999985 7999975 45553321134556778999965 4 5889999
Q ss_pred EEeeec--CCccEEEEEEcCCCCCcEEcccc
Q 010428 201 IIGSKI--NRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 201 ~~ga~~--~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
++++.. ....++.+++|+|+.+|++.+.+
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34567999999999999987643
No 38
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.94 E-value=2.2e-08 Score=100.21 Aligned_cols=153 Identities=20% Similarity=0.282 Sum_probs=112.4
Q ss_pred cCCcceEEECCEEEEEeeeCC--CCCCCCCcEEEEEEeCCCCc-ceecC-CCCCC-CCCccCCCeEeeeEEEcCCCceEE
Q 010428 59 NDPNGVMIYKGIYHLFYQYNP--KGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYP-SQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P--~~~~~g~~~WgHa~S~DLvh-W~~~~-~aL~P-~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
-.| ++++.++++||+|+--- +...-...|.+-|.|+|+++ |+-.+ +.+.| ..++|.-||..+.++.. +++++|
T Consensus 32 FNp-av~~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt~I-~~~y~m 109 (314)
T COG2152 32 FNP-AVVLVGGELLLLYRVVEGYYEDHSSISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVTKI-GGRYYM 109 (314)
T ss_pred ecc-eeEEECCEEEEEEEEeccccccCccceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEEEE-CCEEEE
Confidence 356 78999999999999711 01112456899999999999 99764 78899 66788899999999875 899999
Q ss_pred EEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEe-CCCCeEEEEEeeecC---Cc
Q 010428 134 FYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL-GPDKRWRVIIGSKIN---RK 209 (511)
Q Consensus 134 ~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~-~~~g~w~m~~ga~~~---~~ 209 (511)
.|||.+ +..+..++|+++|- .+|+|.+ +++.+ +.||-. ++. .-+|+|.|+---... ..
T Consensus 110 tYTa~s-~~g~~~~la~t~~f-----~n~~rig--~i~~p---------dn~~~~-lfP~~~ngk~~~lhr~~~~~~~~~ 171 (314)
T COG2152 110 TYTAYS-DKGPRLALAVTKDF-----LNWERIG--AIFPP---------DNKDAA-LFPKKINGKYALLHRPVLGEYGMK 171 (314)
T ss_pred EEEecC-CCCcccchhhhhhh-----hhhhhcc--cccCC---------CCCCce-EeeEEecCcEEEEEeecccccCcc
Confidence 999985 45677899998884 7899862 44432 245543 232 136899988653321 25
Q ss_pred cEEEEEEcCCCCCcEEcccccc
Q 010428 210 GLAILYRSKDFVHWIKAKHPLH 231 (511)
Q Consensus 210 G~i~ly~S~Dl~~W~~~~~~l~ 231 (511)
+-|++..|.|+.+|.....++.
T Consensus 172 ~niwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 172 GNIWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred CceEEEEcCCccCCCccceeec
Confidence 6799999999999987655443
No 39
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.93 E-value=6.3e-08 Score=98.94 Aligned_cols=171 Identities=18% Similarity=0.173 Sum_probs=103.8
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEec
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg 137 (511)
..||. +++++|+|+||-.... +..+|+||++|+..+.++. ..++|.+++.. .+|++|++|+.
T Consensus 3 ~~DP~-i~~~~g~YY~~~T~~~----------~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~~-~~g~~Y~~~~~ 64 (295)
T cd08982 3 AADPV-VILFKGEYYLFASMSG----------GYWHSSDLIDWDFIPTNSL------PDEGYAPAVFV-YDGTLYYTAST 64 (295)
T ss_pred CCCCe-EEEECCEEEEEEeCCC----------CeEECCCcCCceECCcccC------CCCcCcCEEEE-ECCEEEEEEeC
Confidence 36994 7789999999866421 2578999999999987763 46799999876 58887766653
Q ss_pred cCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEE-
Q 010428 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYR- 216 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~- 216 (511)
. .+.+|+|++..++ -|+.. +. . . .....||.+ |.++||++||+.|.... .+ |.+.+
T Consensus 65 ~------~~~v~~s~~p~gp---~w~~~----~~--~--~---~~~~IDp~v-f~DdDGk~Yl~~g~~~~-~~-i~~~eL 121 (295)
T cd08982 65 Y------NSRIYKTADPLSG---PWEEV----DK--S--F---PPGLADPAL-FIDDDGRLYLYYGCSNN-YP-LRGVEV 121 (295)
T ss_pred C------CceEEEeCCCCCC---Ccccc----cc--c--c---CCCccCCce-EECCCCCEEEEEecCCC-CC-eEEEEE
Confidence 2 2357888765322 25432 10 1 0 123579985 45578999999975321 11 22221
Q ss_pred -----------------cCCCCCcEEcccccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCceeE
Q 010428 217 -----------------SKDFVHWIKAKHPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKHEY 279 (511)
Q Consensus 217 -----------------S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~~~ 279 (511)
+..-..|+..+.-.......+..|-|-+++.+ | +++|..|........
T Consensus 122 ~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~~EGP~i~k~~--G-------------~YYL~yS~~~~~~~~ 186 (295)
T cd08982 122 DPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPWMEGAWMTKHN--G-------------KYYLQYAAPGTEFNT 186 (295)
T ss_pred CcccCCccCcceEEEeCCCCCcCeEecCcccccccCCccccccEEEEEC--C-------------EEEEEEeCCCcccCc
Confidence 22233455432211111123467899999876 5 888988875433344
Q ss_pred EEEEE
Q 010428 280 YTVGT 284 (511)
Q Consensus 280 Y~iG~ 284 (511)
|.+|-
T Consensus 187 Y~v~~ 191 (295)
T cd08982 187 YADGV 191 (295)
T ss_pred EeEEE
Confidence 55543
No 40
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.89 E-value=9.9e-08 Score=95.68 Aligned_cols=191 Identities=18% Similarity=0.315 Sum_probs=122.8
Q ss_pred ccCCCCC---ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCC----CCCCccCCCeEeeeE
Q 010428 51 FQPPKNW---INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIY----PSQQSDINGCWSGSA 123 (511)
Q Consensus 51 f~p~~gw---~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~----P~~~~D~~g~~SGsa 123 (511)
.+|+.|| +.|| -+++++|+||+|-...-. . .|+-+-+. |+||+.++-|+. +.. ...+.|.+.+
T Consensus 14 ~~pk~~~~~~lkDP-tiv~~nGkYyvYgT~~~~-~-----~~~s~~~S-f~~Ws~~g~A~q~~l~~~~--~~~~fwAPqV 83 (303)
T cd08987 14 ISPKSDWIVAIKDP-TVVYYNGRYHVYATTADA-G-----NYGSMYFN-FTDWSQAASATQYYLQNGN--MTGYRVAPQV 83 (303)
T ss_pred ccCCCCCeeeecCC-eEEEECCEEEEEEccCCC-C-----Cceeeeec-ccCHhHhccchhhcccCCC--CCcccccCEE
Confidence 4677899 6899 467899999999876431 2 24333333 999999887652 221 2346788887
Q ss_pred EE-cCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEE
Q 010428 124 TI-LPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVII 202 (511)
Q Consensus 124 v~-~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ 202 (511)
+. .+++++||+|+.. ..++|+++|..+|. .|... .|++... ........-|+.| .. ++++.||+.
T Consensus 84 fyf~pk~kwYL~Yq~~------~~~yaTs~dp~~P~--~ws~~--qpl~~~~--~~~~~~~~ID~~v-I~-Dd~~~YLff 149 (303)
T cd08987 84 FYFAPQNKWYLIYQWW------PAAYSTNSDISNPN--GWSAP--QPLFSGT--PNGSPGGWIDFWV-IC-DDTNCYLFF 149 (303)
T ss_pred eeeccCCEEEEEEecC------ceEEEeCCCCCCCC--ccCCC--cccccCc--ccCCCCCccceeE-Ee-CCCCEEEEE
Confidence 62 3689999999952 25689999988874 68753 5776432 1112344689996 34 688899888
Q ss_pred eeecCCccEEEEEEcC-CCCCcEEc-ccc--ccc-CCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCCCce
Q 010428 203 GSKINRKGLAILYRSK-DFVHWIKA-KHP--LHS-VKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDTKH 277 (511)
Q Consensus 203 ga~~~~~G~i~ly~S~-Dl~~W~~~-~~~--l~~-~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~~~ 277 (511)
.. ..| .+|+|+ .+.+.... +.. +.. ......+|-|.+++++ | ..++.|+++..+...
T Consensus 150 ~~---dnG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~--G-----------~~~YlmiveA~g~~~ 211 (303)
T cd08987 150 SD---DNG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVK--G-----------QNQYLLIVEAIGSDG 211 (303)
T ss_pred ec---CCC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEEC--C-----------CeEEEEEEEecCCCC
Confidence 64 234 467752 22222110 111 111 1224589999999998 5 138999999876534
Q ss_pred eEEEEE
Q 010428 278 EYYTVG 283 (511)
Q Consensus 278 ~~Y~iG 283 (511)
.-|+++
T Consensus 212 ~rYfrs 217 (303)
T cd08987 212 GRYFRS 217 (303)
T ss_pred CCeEEE
Confidence 457777
No 41
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.86 E-value=5.1e-08 Score=102.45 Aligned_cols=192 Identities=20% Similarity=0.235 Sum_probs=119.1
Q ss_pred CCcceEE-ECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCCC----cceecCCCCCCCCCc-cCCCeEeeeEEEcC-C
Q 010428 60 DPNGVMI-YKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQS-DINGCWSGSATILP-G 128 (511)
Q Consensus 60 DPnG~~~-~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DLv----hW~~~~~aL~P~~~~-D~~g~~SGsav~~~-d 128 (511)
|+.|-+. ++|.--+|-.-.|.. ..|+..|+++.-|++.. +|+..+.++...... ...--|||||++.. |
T Consensus 64 d~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~d 143 (428)
T PF02435_consen 64 DADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNNDD 143 (428)
T ss_dssp -TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTTT
T ss_pred cccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCCC
Confidence 3555433 688777777776653 35678999999999999 999998877555431 12346999999987 8
Q ss_pred CceEEEEeccCC--CC--cceE-----EEEEecCCCCcccceeeecCCCceecCCCCCcC------CCCCCCCCEEEEeC
Q 010428 129 EKPAIFYTGIDP--HN--RQVQ-----NLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQI------NTSSFRDPTTAWLG 193 (511)
Q Consensus 129 g~~~l~YTg~~~--~~--~q~q-----~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~------~~~~fRDP~vvw~~ 193 (511)
|++.||||.... .. .|.. +++.+.+. +.-+..|++. ..++.++. ..| ....||||++ |.+
T Consensus 144 g~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe~DG-~~Yqt~~Q~~~~afRDP~~-f~D 218 (428)
T PF02435_consen 144 GSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFEGDG-KHYQTYEQNPGYAFRDPHV-FED 218 (428)
T ss_dssp SEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES--S-SSB--HHHHHH---EEEEE-EEE
T ss_pred CeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeeccch-hhhhChhhcCCccccCCee-EEC
Confidence 999999999643 12 2221 22333332 2223456554 35554331 111 1247999995 554
Q ss_pred -CCCeEEEEEeeec---C------------------------------CccEEEEEEcC--CCCCcEEcccccccCCCCC
Q 010428 194 -PDKRWRVIIGSKI---N------------------------------RKGLAILYRSK--DFVHWIKAKHPLHSVKGTG 237 (511)
Q Consensus 194 -~~g~w~m~~ga~~---~------------------------------~~G~i~ly~S~--Dl~~W~~~~~~l~~~~~~g 237 (511)
++|+-||++-+.. + ..|+|.+.+.+ ++..|+...+++.+..-..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 6899999986543 0 14678888764 4568998864444444456
Q ss_pred ceecCceEEeccCCCCCccccCCCCCceeEEEEe
Q 010428 238 MWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVS 271 (511)
Q Consensus 238 ~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S 271 (511)
..|-|+++.++ | ||+|+.+
T Consensus 299 e~ERP~iv~~~--g-------------kyYLFt~ 317 (428)
T PF02435_consen 299 ELERPHIVFMN--G-------------KYYLFTI 317 (428)
T ss_dssp -EEEEEEEEET--T-------------EEEEEEE
T ss_pred cccCCcEEEEC--C-------------EEEEEEE
Confidence 89999999998 6 8888765
No 42
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.71 E-value=1.2e-07 Score=96.25 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=82.0
Q ss_pred cCCcceEEECCEEEEEeeeCCCC----CCCCCcEEEEEEeCCC-Ccceec-CCCCCCCC-CccCCCeEeeeEEEcCCCce
Q 010428 59 NDPNGVMIYKGIYHLFYQYNPKG----AVWGNIVWAHSTSKDL-INWIPH-DPAIYPSQ-QSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 59 NDPnG~~~~~G~YHLFYQ~~P~~----~~~g~~~WgHa~S~DL-vhW~~~-~~aL~P~~-~~D~~g~~SGsav~~~dg~~ 131 (511)
-+| .+++++|+|||||...... ...+...+|.|+|+|+ -+|+++ .++|.|.. .||..+++.++++..++|++
T Consensus 81 ~~P-~vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~ 159 (291)
T cd08994 81 HNP-TIKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSY 159 (291)
T ss_pred cCC-eEEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCE
Confidence 468 4678899999999986531 1223568999999994 699994 56777754 36778899999987558999
Q ss_pred EEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCcee
Q 010428 132 AIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLM 171 (511)
Q Consensus 132 ~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi 171 (511)
+|+|+|.... ..+.|++|+|+|.. .+|+|...+||+
T Consensus 160 ~m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 160 LLVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 9999998642 45789999998853 469998666665
No 43
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.66 E-value=7.2e-07 Score=89.94 Aligned_cols=133 Identities=20% Similarity=0.207 Sum_probs=87.5
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecC--CCCCCCCCccCCCeEeeeEEEcC-CCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHD--PAIYPSQQSDINGCWSGSATILP-GEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~--~aL~P~~~~D~~g~~SGsav~~~-dg~~~l~ 134 (511)
+-.| .+++.+|+|||||..+... .......++|+|+|+++|++.+ +.+.+...++...+-.+.++.++ +|+++|+
T Consensus 62 ~~sg-s~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~ 139 (280)
T cd08995 62 IGTG-SVIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWML 139 (280)
T ss_pred ceEe-EEEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEE
Confidence 4456 3667899999999976432 1234579999999999999875 33432333443334456776643 5899999
Q ss_pred EeccCC----CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 135 YTGIDP----HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 135 YTg~~~----~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
|.+... .......++.|+| |++|+.. .+++.+. .+ ..+.-|. +++ .+|+|+|+++.+.
T Consensus 140 ~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~--~~---~~~E~P~-l~~-~~g~~~L~~s~~~ 201 (280)
T cd08995 140 LATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPG--LY---FMPECPD-LFK-MGDWWYLVYSEFS 201 (280)
T ss_pred EEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCC--Cc---ceeecce-EEE-ECCEEEEEEEecc
Confidence 987542 2334566777776 4799875 4665432 11 2367787 455 5799999998753
No 44
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.61 E-value=1.8e-06 Score=87.15 Aligned_cols=155 Identities=16% Similarity=0.154 Sum_probs=98.2
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCC-C-CCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAI-Y-PSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL-~-P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+..| -+++++|+|||||..+-.+ .....+|+|+|+|.. .|++.+..+ . +.. ..++..+++++++||++||+
T Consensus 62 ~waP-~v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~~---~~~~~Dp~v~~d~dG~~Yl~ 135 (287)
T cd08999 62 FWAP-DVSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPEG---EGGAIDPSFFTDTDGKRYLV 135 (287)
T ss_pred ccCc-eEEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCCC---CCCccCCCeEECCCCCEEEE
Confidence 4567 4788999999999976543 235679999999965 899875332 2 221 23456788887668999999
Q ss_pred EeccCCC--CcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec--CC-
Q 010428 135 YTGIDPH--NRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--NR- 208 (511)
Q Consensus 135 YTg~~~~--~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--~~- 208 (511)
|.+.... ..+.+.++ ++.|+ .+|+... ..++.+. ..+....+.-|.+ ++ .+|+|||++++.. ..
T Consensus 136 ~~~~~~~~~~~~~i~~~~ls~d~-----~~~~~~~-~~i~~~~--~~~~~~~~EgP~i-~k-~~g~yyl~~S~~~~~~~~ 205 (287)
T cd08999 136 WKSDGNSIGKPTPIYLQELSADG-----LTLTGEP-VRLLRND--EDWEGPLVEAPYL-VK-RGGYYYLFYSAGGCCSGA 205 (287)
T ss_pred EeccCCCCCCCceEEEEEeCCCC-----ccccCCc-Eeeeccc--ccccCCceEeeEE-EE-ECCEEEEEEEcCCccCCC
Confidence 9764321 12224444 44443 5665431 2333322 2223344678984 56 5899999998753 11
Q ss_pred -ccEEEEEEcCCCC-CcEEccc
Q 010428 209 -KGLAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 209 -~G~i~ly~S~Dl~-~W~~~~~ 228 (511)
.=.+.+++|+++. .|+....
T Consensus 206 ~~y~i~~~~s~~~~Gpw~~~~~ 227 (287)
T cd08999 206 STYAVGVARSKSLLGPYVKAPG 227 (287)
T ss_pred CCEEEEEEEeCCCcCCcCCCCC
Confidence 2257789999987 8886543
No 45
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.59 E-value=6.1e-06 Score=83.75 Aligned_cols=157 Identities=13% Similarity=0.124 Sum_probs=94.6
Q ss_pred CCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 56 NWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 56 gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.+..| -+++.+|+|||||...... ......++|+|+|.. .|+..+..+.+.. ..+..++++.++||+++|+
T Consensus 53 ~~~waP-~v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~----~~~iD~~vf~d~dG~~yl~ 125 (294)
T cd08991 53 RGFWAP-EVYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE----PKSIDAHPFIDDDGKPYLY 125 (294)
T ss_pred CcEEcc-EEEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC----CcccCCceEECCCCCEEEE
Confidence 345678 4889999999999976433 235688999999987 7887654433322 2345788888777999999
Q ss_pred EeccCCCC--cceEEEEEecCCCCcccceeeecCCC---ceecC-------C-CC-CcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 135 YTGIDPHN--RQVQNLAVPKNLSDPYLREWVKSPKN---PLMAP-------D-AM-NQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 135 YTg~~~~~--~q~q~lA~s~d~~d~~l~~w~K~~~n---PVi~~-------p-~~-~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
|+...... ......+.+.|. .+|...... |+..+ + .. ...+..-..-|.+ ++ .+|+|||
T Consensus 126 ~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~-~k-~~g~yyl 198 (294)
T cd08991 126 YSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTV-LK-HNGRYYL 198 (294)
T ss_pred EEecCCCCcccceEEEEEccce-----eeeccceeeccccccccccccccccccccccccCceeeCcEE-EE-ECCEEEE
Confidence 98754321 234444566553 445421111 22111 0 00 0011123457774 55 5789999
Q ss_pred EEeeec-CCc-cEEEEEEcCCC-CCcEEc
Q 010428 201 IIGSKI-NRK-GLAILYRSKDF-VHWIKA 226 (511)
Q Consensus 201 ~~ga~~-~~~-G~i~ly~S~Dl-~~W~~~ 226 (511)
++.+.. ... =.+.+++|+++ -.|+..
T Consensus 199 ~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 199 TYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred EEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 987643 111 14677888874 689874
No 46
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.58 E-value=4.9e-06 Score=83.73 Aligned_cols=154 Identities=10% Similarity=0.019 Sum_probs=96.4
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCC-CCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~a-L~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+.-|. +++++|+|||||..... .+....|+|+|+|.. .|++.... +.+ ...+...+..++++++.||+++
T Consensus 61 ~~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~y 135 (274)
T cd08990 61 KGQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAY 135 (274)
T ss_pred cCCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEE
Confidence 34566784 78899999999997643 345679999999976 79987543 322 2222344567888887789999
Q ss_pred EEEeccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCC-CCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCcc
Q 010428 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDA-MNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~-~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G 210 (511)
|+|.+. +...+| .+.| +.+|+.. ..+|..++ .......-+.-|. +++ .+|+|||++++.. ..
T Consensus 136 l~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~-i~k-~~G~YYl~yS~~~--~~ 199 (274)
T cd08990 136 LYWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPW-VHK-RNGTYYLSYSTGD--PE 199 (274)
T ss_pred EEECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCccccee-EEE-ECCEEEEEEECCC--Cc
Confidence 999864 233444 3333 3567542 12332110 0011112245787 456 6899999998753 45
Q ss_pred EEEEEEcCCCC-CcEEcccc
Q 010428 211 LAILYRSKDFV-HWIKAKHP 229 (511)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~~ 229 (511)
.+.+.+|+++. .|+..+.+
T Consensus 200 ~~~~a~s~~p~GP~~~~g~~ 219 (274)
T cd08990 200 EIAYATSDSPLGPFTYRGVI 219 (274)
T ss_pred EEEEEEcCCCCCCcccCcEE
Confidence 67777888875 57654433
No 47
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.57 E-value=2.3e-06 Score=84.90 Aligned_cols=156 Identities=14% Similarity=0.114 Sum_probs=98.0
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
.+-+.+|. +++++|+|||||.....+ ......+.|+|+|+.+|....... +.. ....++..++++.+++|+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~-~~~-~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIR-PPT-SNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccC-cCc-cCCCCccCcceEEcCCCCEEEE
Confidence 45678894 889999999999987642 234579999999999987653211 111 1234577899988766999999
Q ss_pred EeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC--CccE
Q 010428 135 YTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--RKGL 211 (511)
Q Consensus 135 YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--~~G~ 211 (511)
|.+.... ....+.++.+++. ..|.. ..+++... .......+..|.+ ++ .+|+|||++.+... ..-.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~--~~~~~~~~EgP~~-~k-~~g~yyl~ys~~~~~~~~y~ 199 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSAS--SGNNNAVTEGPTI-FK-KNGYYYLTYSANGTGDYGYN 199 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeee--eccCCCceEccEE-EE-ECCEEEEEEEeCCCCCCCce
Confidence 9876421 2234556655543 12222 23332111 1111234678984 56 57999999877542 2346
Q ss_pred EEEEEcCCCC-CcEEc
Q 010428 212 AILYRSKDFV-HWIKA 226 (511)
Q Consensus 212 i~ly~S~Dl~-~W~~~ 226 (511)
+.+++|++.. -|+..
T Consensus 200 ~~~~~s~~~~Gp~~~~ 215 (271)
T cd08978 200 IGYATSDSIDGPYVKK 215 (271)
T ss_pred EEEEECCCCCCCcCcC
Confidence 7788898874 46543
No 48
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.43 E-value=1e-06 Score=90.66 Aligned_cols=105 Identities=18% Similarity=0.279 Sum_probs=78.5
Q ss_pred CCCeEeeeEEEcCCCc-eEEEEeccCCCCcc-eEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEe
Q 010428 115 INGCWSGSATILPGEK-PAIFYTGIDPHNRQ-VQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWL 192 (511)
Q Consensus 115 ~~g~~SGsav~~~dg~-~~l~YTg~~~~~~q-~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~ 192 (511)
...+|.+.|++..++. ++|+|.+....... .+++|.|.|+ ++|++. .+||+.+. ..++.....||.|+..
T Consensus 29 ~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~--~~~e~~GvEDPRVt~i 100 (312)
T PF04041_consen 29 PNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPD--TDYEEWGVEDPRVTKI 100 (312)
T ss_dssp SSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE---SSTTHTEEEEEEEEEE
T ss_pred cceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccC--CCCcccCccceeEEEE
Confidence 4679999998653442 89999887654444 8999999997 789886 57999765 4455567899997754
Q ss_pred CCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccc
Q 010428 193 GPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHP 229 (511)
Q Consensus 193 ~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~ 229 (511)
+++|||.+.+......++.+.+|+|+.+|++.+..
T Consensus 101 --~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~ 135 (312)
T PF04041_consen 101 --DDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKI 135 (312)
T ss_dssp --TTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECT
T ss_pred --CCEEEEEEEEecCCCcccceEEccchHhhEEeccc
Confidence 67999999887655567889999999999998743
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.42 E-value=8.2e-06 Score=81.28 Aligned_cols=157 Identities=13% Similarity=0.110 Sum_probs=100.2
Q ss_pred CCccCCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeCCCCc-ceecC-CCCCCC--CCccCCCeEeeeEEEcCCCc
Q 010428 56 NWINDPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN-WIPHD-PAIYPS--QQSDINGCWSGSATILPGEK 130 (511)
Q Consensus 56 gw~NDPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvh-W~~~~-~aL~P~--~~~D~~g~~SGsav~~~dg~ 130 (511)
+-+..|. +++.+ |+|+|||..... ..+....+.|+|+|+.. |++.. ..+.+. ...+...+..++++.+++|+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 4466784 67777 999999998643 22456899999999975 56442 112222 12233456788888876699
Q ss_pred eEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC---
Q 010428 131 PAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN--- 207 (511)
Q Consensus 131 ~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~--- 207 (511)
++|+|.+........+.+|.|+|. .+|++....+++... .....+.-|.+ ++ .+|+|||++++...
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~----~~~~~~E~P~~-~~-~~g~~yL~~s~~~~~~~ 203 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEG----EGGKQIEGPGL-LK-KNGKYYLFYSINGTGRV 203 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeec----cCCCceeccEE-EE-ECCEEEEEEEcCCCcCC
Confidence 999998764333456788988874 678765322223221 12245678985 55 57999999987541
Q ss_pred -CccEEEEEEcCC-CCCcEEc
Q 010428 208 -RKGLAILYRSKD-FVHWIKA 226 (511)
Q Consensus 208 -~~G~i~ly~S~D-l~~W~~~ 226 (511)
..-.+.+++|++ +-.|+..
T Consensus 204 ~~~y~~~~~~~~~~~g~~~~~ 224 (286)
T cd08772 204 DSTYSIGYARSESDTGPYVPK 224 (286)
T ss_pred CCCcceEEEEccCCCCCcccC
Confidence 123566777765 3456543
No 50
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.40 E-value=2.9e-06 Score=85.45 Aligned_cols=121 Identities=18% Similarity=0.185 Sum_probs=72.3
Q ss_pred CCCCEEEEeCCCCeEEEEEeeecC---------CccEEEEEEcCCCCCcEEcccccccCC--------------CCCcee
Q 010428 184 FRDPTTAWLGPDKRWRVIIGSKIN---------RKGLAILYRSKDFVHWIKAKHPLHSVK--------------GTGMWE 240 (511)
Q Consensus 184 fRDP~vvw~~~~g~w~m~~ga~~~---------~~G~i~ly~S~Dl~~W~~~~~~l~~~~--------------~~g~wE 240 (511)
+|||+|+ +..+|.|||+..+... ..+.|.+|+|+||++|+..+..+.... ..+..+
T Consensus 2 ~rDP~v~-~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVT-LGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEE-ecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 7999965 4457888888765431 124588999999999998775443221 123445
Q ss_pred cCceEEeccCCCCCccccCCCCCceeEEEEeeCCC--ceeEEEEEEEeCCCCeeecCCCCcCCCCccccccCCCccceee
Q 010428 241 CPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDDT--KHEYYTVGTYSTAKDRYVPDEGSVESDSGLRFDYGKYYASKTF 318 (511)
Q Consensus 241 CPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~~--~~~~Y~iG~~d~~~~~F~p~~~~~d~~~~~~lD~G~fYA~qtf 318 (511)
+|+++.++ | +|+|.+|.... ......+..-+...+.|+..... ..+ ..-.-+..|
T Consensus 81 AP~v~~~~--g-------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~------~~~--~~~iD~~~f 137 (269)
T cd08986 81 APELHYIK--G-------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN------KPL--FPGIDPSLF 137 (269)
T ss_pred CceEEEEC--C-------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC------CCC--CCccCCceE
Confidence 99999997 6 88988886431 12223333333333455432110 000 012346778
Q ss_pred ecCCCCcEEEE
Q 010428 319 FDGAKNRRVLW 329 (511)
Q Consensus 319 ~d~~~grril~ 329 (511)
.|+ +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 875 7877765
No 51
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.37 E-value=1.7e-06 Score=87.59 Aligned_cols=90 Identities=20% Similarity=0.318 Sum_probs=63.3
Q ss_pred CCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-----CCccEEEEEEcCCCCCcEEcccccccCC-CCCce
Q 010428 166 PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-----NRKGLAILYRSKDFVHWIKAKHPLHSVK-GTGMW 239 (511)
Q Consensus 166 ~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-----~~~G~i~ly~S~Dl~~W~~~~~~l~~~~-~~g~w 239 (511)
.++|||.+. . ....+|||+|++..++|+|||+..... .....|.+++|+||++|+..+..+.... ...+|
T Consensus 4 ~~~pvl~~~--~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W 79 (276)
T cd08983 4 NGNPVLTST--A--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW 79 (276)
T ss_pred CCceEEeCC--c--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe
Confidence 368999754 2 347799999766435889999876542 1223588999999999998764432222 23467
Q ss_pred ecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 240 ECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 240 ECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
+|++|.....| +|++.+|..
T Consensus 80 -APev~~d~~~g-------------~y~~~~s~~ 99 (276)
T cd08983 80 -APEAFWDAERG-------------QYVVYWSSR 99 (276)
T ss_pred -CccceEcCCCC-------------eEEEEEecc
Confidence 99999886434 888888764
No 52
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.29 E-value=9.4e-06 Score=81.75 Aligned_cols=78 Identities=23% Similarity=0.367 Sum_probs=56.1
Q ss_pred CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccC---------CCCCc
Q 010428 168 NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSV---------KGTGM 238 (511)
Q Consensus 168 nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~---------~~~g~ 238 (511)
||||.. ++.||.|+ + .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++
T Consensus 1 NPvi~~---------~~~DP~ii-~-~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~ 68 (269)
T cd08989 1 NPILKG---------DNPDPSII-R-AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGI 68 (269)
T ss_pred CCcCCC---------CCCCCcEE-E-ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcE
Confidence 688742 36899965 4 47899999865432233 7899999999999987554321 12357
Q ss_pred eecCceEEeccCCCCCccccCCCCCceeEEEEeeC
Q 010428 239 WECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 239 wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
| +|+++.++ | ||+|.++..
T Consensus 69 W-AP~v~~~~--G-------------~yy~yy~~~ 87 (269)
T cd08989 69 W-APCLSYYD--G-------------KFWLIYTAV 87 (269)
T ss_pred E-cceEEEEC--C-------------EEEEEEecc
Confidence 7 99999997 6 888888764
No 53
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.28 E-value=1.4e-05 Score=81.14 Aligned_cols=78 Identities=19% Similarity=0.388 Sum_probs=56.5
Q ss_pred CCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEE
Q 010428 167 KNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFP 246 (511)
Q Consensus 167 ~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~ 246 (511)
.||||.. .+.||.|+ + .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+. ....++| +|+++.
T Consensus 7 ~nPv~~~---------~~~DP~i~-~-~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~-~~~~~~W-AP~i~~ 72 (280)
T cd09002 7 RNPILAG---------DYPDPSIL-R-DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALP-EYEGDVW-APDLCK 72 (280)
T ss_pred eCCccCC---------CCCCCEEE-E-ECCEEEEEEcchh-cCCCEEEEECCCcCCceEcccccc-CCCCCEE-cCeeEE
Confidence 4899852 26799965 4 4789999765432 223488999999999998765443 2335689 899999
Q ss_pred eccCCCCCccccCCCCCceeEEEEeeC
Q 010428 247 VSTYGLNGLDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 247 l~~~g~~g~~~s~~~~~~k~vL~~S~~ 273 (511)
.+ | ||+|.++..
T Consensus 73 ~~--g-------------kyy~yys~~ 84 (280)
T cd09002 73 YD--G-------------RYYIYFPAI 84 (280)
T ss_pred EC--C-------------EEEEEEEee
Confidence 87 6 888888764
No 54
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.24 E-value=4.1e-05 Score=77.65 Aligned_cols=154 Identities=14% Similarity=0.091 Sum_probs=93.1
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCC--CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDL--INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DL--vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
.+-+..| -+++.+|+|||||..+..+. +....++|+|+|+ -.|+..++++.+....+...+..+++++++||++|
T Consensus 55 ~~~~wAP-~v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Y 131 (288)
T cd08998 55 SGNLWAP-DVIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLW 131 (288)
T ss_pred CCCccCC-eEEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEE
Confidence 4456678 47789999999999765332 3457899999998 79999876665543222335667888887789999
Q ss_pred EEEeccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-C---
Q 010428 133 IFYTGIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N--- 207 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~--- 207 (511)
|+|.+... .+.++ .+.|.+.+ ..+... ...++..+ . .......|+ +++ .+|+|||++++.. .
T Consensus 132 l~~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~--~--~~~~~Egp~-~~k-~~g~YYl~~S~~~~~~~~ 198 (288)
T cd08998 132 LSFGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRP--R--GHGAIEAPY-IIY-RGGYYYLFVSYGGCCAGE 198 (288)
T ss_pred EEeeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccC--C--CCCceeeeE-EEE-eCCEEEEEEEcchhcCCC
Confidence 99975321 22333 32332211 222110 01122221 1 112356898 456 5899999987532 1
Q ss_pred Ccc-EEEEEEcCCCC-CcE
Q 010428 208 RKG-LAILYRSKDFV-HWI 224 (511)
Q Consensus 208 ~~G-~i~ly~S~Dl~-~W~ 224 (511)
..+ ++.+++|+++. -|+
T Consensus 199 ~~~y~v~~~~s~~~~GP~~ 217 (288)
T cd08998 199 DSTYNIRVGRSKSITGPYV 217 (288)
T ss_pred CCceEEEEEEcCCCCCCcC
Confidence 122 57899998864 455
No 55
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.22 E-value=1.5e-05 Score=80.98 Aligned_cols=133 Identities=14% Similarity=0.075 Sum_probs=87.5
Q ss_pred CCcceEEEC-CEEEEEeeeCCCCCCCCCcEEEEEEeC-CCCcceecCCC-CCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYK-GIYHLFYQYNPKGAVWGNIVWAHSTSK-DLINWIPHDPA-IYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~-G~YHLFYQ~~P~~~~~g~~~WgHa~S~-DLvhW~~~~~a-L~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.++ ++..+ |+|+|||..+......+....++|+|+ |+++|++.+.. +.+....+..+.-.+.++.. +|+++|+|+
T Consensus 65 sGs-av~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~~~~~~~~~~~~~RDP~V~~~-~g~~~m~~g 142 (298)
T cd08996 65 SGS-AVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNPVIPPPDGYTTHFRDPKVFWH-DGKWYMVLG 142 (298)
T ss_pred eCe-EEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCceEcCCCCCCCcccCCeEEeE-CCEEEEEEE
Confidence 443 34456 999999997653212245678999999 89999987532 22111223345567888764 699999999
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC--CeEEEEEeeec
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD--KRWRVIIGSKI 206 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~--g~w~m~~ga~~ 206 (511)
+..........++.|+|. ++|+.. .+++... ......+.-|.+ ++ -+ ++|+|+++...
T Consensus 143 ~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~---~~~~~~~EcP~l-~~-l~~~~k~vL~~s~~~ 202 (298)
T cd08996 143 AGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSL---GDFGYMWECPDL-FP-LDVEGKWVLIFSPQG 202 (298)
T ss_pred EEecCCCcEEEEEECCCC-----CCCEEc--ceecccC---CCccceEeCCcE-EE-ECCCCeEEEEECCCC
Confidence 875444556788888874 899975 3443211 112235778884 55 46 99999998764
No 56
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.21 E-value=2.2e-05 Score=80.03 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=55.1
Q ss_pred CCCCCCEEEEeCCCCeEEEEEeeecCC----ccEEEEEEcCCCCCcEEcccccccCC---CCCceecCceEEeccCCCCC
Q 010428 182 SSFRDPTTAWLGPDKRWRVIIGSKINR----KGLAILYRSKDFVHWIKAKHPLHSVK---GTGMWECPDFFPVSTYGLNG 254 (511)
Q Consensus 182 ~~fRDP~vvw~~~~g~w~m~~ga~~~~----~G~i~ly~S~Dl~~W~~~~~~l~~~~---~~g~wECPdlf~l~~~g~~g 254 (511)
..+|||+|++..++|.|||+..+.... ...+.+|+|+||++|+..+..+.... ......+|++...+ |
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~--G--- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYK--G--- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeC--C---
Confidence 358999987654589999988765311 12378999999999998775443221 12356789999887 6
Q ss_pred ccccCCCCCceeEEEEeeC
Q 010428 255 LDTSDMGPNTKHVLKVSLD 273 (511)
Q Consensus 255 ~~~s~~~~~~k~vL~~S~~ 273 (511)
+|+|.++..
T Consensus 79 ----------~yyly~s~~ 87 (291)
T cd08981 79 ----------RYYMFATFH 87 (291)
T ss_pred ----------EEEEEEEec
Confidence 888887764
No 57
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.00 E-value=0.00038 Score=70.02 Aligned_cols=141 Identities=8% Similarity=0.039 Sum_probs=86.0
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-ccee-cC-CCCCCCCCccCCCeEeeeEEEcCCCceEEE
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIP-HD-PAIYPSQQSDINGCWSGSATILPGEKPAIF 134 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~-~~-~aL~P~~~~D~~g~~SGsav~~~dg~~~l~ 134 (511)
+.-| -+++++|+|+|||..+ ...++|+|+|.. .|++ .+ +.+.+.. .......++++.++||+++|+
T Consensus 66 ~wAP-~v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~--~~~~~iDp~vf~d~dG~~yl~ 134 (275)
T cd09004 66 AWAP-SVIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT--FGAQPIDPDVFIDDDGQAYLY 134 (275)
T ss_pred cCCC-eEEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc--CCCCccCCCeEECCCCCEEEE
Confidence 4457 4788999999999865 358999999975 7887 33 3333321 123456688887778999999
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-C-CccEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-N-RKGLA 212 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~-~~G~i 212 (511)
|.+.. .......+.|. .+|+.. ..++... . ..-+.-|. +++ .+|+|||++++.. . ..-++
T Consensus 135 ~~~~~----~~~i~~l~~d~-----~~~~~~--~~~~~~~--~---~~~~EgP~-i~k-~~G~yyl~ys~~~~~~~~Y~~ 196 (275)
T cd09004 135 WGGWG----HCNVAKLNEDM-----ISFDGE--RDGSEIT--P---KNYFEGPF-MFK-RNGIYYLMWSEGGWTDPDYHV 196 (275)
T ss_pred EcCcC----CEEEEEECCCc-----ccccCc--ceeeecc--C---CCceecce-EEE-ECCEEEEEEECCCCCCCCceE
Confidence 97531 11122344442 456432 1121111 1 11356887 466 6899999988753 1 12256
Q ss_pred EEEEcCCCC-CcEEcc
Q 010428 213 ILYRSKDFV-HWIKAK 227 (511)
Q Consensus 213 ~ly~S~Dl~-~W~~~~ 227 (511)
.+++|++.. -|+...
T Consensus 197 ~ya~s~~~~GP~~~~~ 212 (275)
T cd09004 197 AYAMADSPLGPFERPG 212 (275)
T ss_pred EEEEcCCCCCCcccCC
Confidence 778888874 477654
No 58
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.95 E-value=0.00077 Score=67.78 Aligned_cols=148 Identities=9% Similarity=0.058 Sum_probs=90.8
Q ss_pred CCCccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCce
Q 010428 55 KNWINDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKP 131 (511)
Q Consensus 55 ~gw~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~ 131 (511)
.+.+.-| -++|. +|+|||||..... ..+....|+|+|++-. .|+.++..+ |. ......+++++++||+.
T Consensus 62 ~~~~waP-~v~y~~~~g~Y~m~~~~~~~--~~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~ 133 (265)
T cd08985 62 GRIIERP-KVIYNAKTGKYVMWMHIDSS--DYSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTA 133 (265)
T ss_pred CcEEECC-eEEEeCCCCEEEEEEEeCCC--CCcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCE
Confidence 3345566 36664 6999999998752 2346689999999875 688776433 21 13346688888888999
Q ss_pred EEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC-Ccc
Q 010428 132 AIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN-RKG 210 (511)
Q Consensus 132 ~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-~~G 210 (511)
||+|..... ....++.-++. +..+ .+.+..... ......|. +++ .+|.|||+.+.... ...
T Consensus 134 Yl~~~~~~~---~~i~i~~L~~d----~~~~---~~~~~~~~~------~~~~EaP~-i~K-~~g~YYL~~S~~t~~~~~ 195 (265)
T cd08985 134 YLLYSDRDN---SDLYIYRLTDD----YLSV---TGEVTTVFV------GAGREAPA-IFK-RNGKYYLLTSGLTGWNPN 195 (265)
T ss_pred EEEEecCCC---CceEEEEeCCC----cccc---cceEEEccC------CCccccce-EEE-ECCEEEEEEccCCCccCC
Confidence 999986531 23444433221 1222 233332111 12457898 577 68999999876531 122
Q ss_pred EEEEEEcCCCC-CcEEccc
Q 010428 211 LAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 211 ~i~ly~S~Dl~-~W~~~~~ 228 (511)
.+.+++|+++. .|+..+.
T Consensus 196 ~~~y~~s~s~~GP~~~~~~ 214 (265)
T cd08985 196 DARYATATSILGPWTDLGN 214 (265)
T ss_pred ceEEEEecCCCCCccccCc
Confidence 46778888875 6776543
No 59
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.89 E-value=0.00011 Score=73.75 Aligned_cols=149 Identities=12% Similarity=0.086 Sum_probs=89.6
Q ss_pred CcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccC
Q 010428 61 PNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGID 139 (511)
Q Consensus 61 PnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~ 139 (511)
| -+++.+|+|||||..... -.....+.|+|++.. .|+.......+ ...+..+++++++||+.||+|.+..
T Consensus 70 P-~i~~~~g~yy~y~~~~~~---~~~~~~~va~a~~~~Gp~~~~~~~~~~-----~~~~iD~~vf~d~dG~~Yl~~~~~~ 140 (286)
T PF04616_consen 70 P-EIHYINGKYYMYYSDSGG---DAGSGIGVATADSPDGPWTDPGKIPIP-----GGNSIDPSVFVDDDGKYYLYYGSWD 140 (286)
T ss_dssp E-EEEEETTEEEEEEEEEST---STTEEEEEEEESSTTS-EEEEEEEEEE-----SSSSSSEEEEEETTSEEEEEEEEST
T ss_pred C-eEEEcCCeEEEEEEccCC---CCCcceeEEEeCCcccccccccceeec-----cccccCceEEEecCCCcEEeCcccC
Confidence 5 367889999999992211 123458899999986 89987544332 2345668888877799999999865
Q ss_pred CC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-CCccEEEEEEc
Q 010428 140 PH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI-NRKGLAILYRS 217 (511)
Q Consensus 140 ~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~-~~~G~i~ly~S 217 (511)
.. ..+.+.+|...+.. .++.......+.... ......-..-|+ +++ .+|+|||++++.. ...=++.+++|
T Consensus 141 ~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~--~~~~~~~~Egp~-~~k-~~g~yYl~~s~~~~~~~y~v~~~~s 212 (286)
T PF04616_consen 141 NGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGD--EGWDGGVVEGPF-VFK-HGGKYYLFYSAGGTGSPYQVGYARS 212 (286)
T ss_dssp TTSSEEEEEEEEEETTT----SSEEEEECEEEEEES--GSSTTTBEEEEE-EEE-ETTEEEEEEEESGSSTTTEEEEEEE
T ss_pred CCccceeEEeecccCcc----ccccCcccccccccc--cccCCccccceE-EEE-cCCCEEEEEeccCCCCCceEEEeec
Confidence 32 23344455433321 334432212222211 112223345787 456 5899999998654 22235778999
Q ss_pred CCCCC-cEEc
Q 010428 218 KDFVH-WIKA 226 (511)
Q Consensus 218 ~Dl~~-W~~~ 226 (511)
+++.. |+..
T Consensus 213 ~~~~gp~~~~ 222 (286)
T PF04616_consen 213 DSPLGPWEWK 222 (286)
T ss_dssp SSTTSGGEET
T ss_pred cCCCCceeec
Confidence 99875 4543
No 60
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.86 E-value=0.00018 Score=77.83 Aligned_cols=134 Identities=10% Similarity=0.066 Sum_probs=82.1
Q ss_pred CCcceEEECCEEEEEeeeCCCCCCCC-CcEEEEEEeCCCCcceecC-CCCCCCC-CccCCCeEeeeEEEcCCCceEEEEe
Q 010428 60 DPNGVMIYKGIYHLFYQYNPKGAVWG-NIVWAHSTSKDLINWIPHD-PAIYPSQ-QSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~~~~~g-~~~WgHa~S~DLvhW~~~~-~aL~P~~-~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
.++ ++..+|++||||..+.....+. ...-++|+|+|+.+|++.+ ++|.+.. .+. .+.-.+.++. .+|+++|++.
T Consensus 88 sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~~~~~~~~-~~fRDP~V~~-~~g~~~M~~g 164 (445)
T TIGR01322 88 SGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIELPPAGYT-AHFRDPKVWK-HNGHWYMVIG 164 (445)
T ss_pred ECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEeCCCCCCc-CcCCCCcEEe-ECCEEEEEEE
Confidence 453 4468999999999875332222 2335689999999999986 4565432 221 2233566654 5899999998
Q ss_pred ccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCC-cCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 137 GIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN-QINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 137 g~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~-~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+..........+..|+| |++|+.. .++..+...+ +.....+.-|- +++ -+++|+|+++..
T Consensus 165 ~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~ECPd-lf~-l~~k~vL~~s~~ 225 (445)
T TIGR01322 165 AQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWECPD-LFS-LDGQDVLLFSPQ 225 (445)
T ss_pred EecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEECCe-EEE-ECCcEEEEEecc
Confidence 75433333446666766 4899975 3554321000 11112467786 455 578999999754
No 61
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.84 E-value=0.00035 Score=72.90 Aligned_cols=148 Identities=15% Similarity=0.152 Sum_probs=91.8
Q ss_pred ECCEEEEEeeeCCCCC---CCCCcEEEEEEeCCCC----cceecCCCCCCCCC-ccC-------------CCeEeeeEEE
Q 010428 67 YKGIYHLFYQYNPKGA---VWGNIVWAHSTSKDLI----NWIPHDPAIYPSQQ-SDI-------------NGCWSGSATI 125 (511)
Q Consensus 67 ~~G~YHLFYQ~~P~~~---~~g~~~WgHa~S~DLv----hW~~~~~aL~P~~~-~D~-------------~g~~SGsav~ 125 (511)
.+|+|||||..+-... ..-....++++|+|+. .|+.+...+.+++. |+. ...=.+.++.
T Consensus 80 ~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~ 159 (349)
T cd08997 80 DDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFE 159 (349)
T ss_pred CCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEe
Confidence 4699999999874311 1124578999999984 55444445556542 221 1122456666
Q ss_pred cC-CCceEEEEeccCCCC---------------------------cceEEEEEecCCCCcccceeeecCCCceecCCCCC
Q 010428 126 LP-GEKPAIFYTGIDPHN---------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (511)
Q Consensus 126 ~~-dg~~~l~YTg~~~~~---------------------------~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~ 177 (511)
++ +|++||+++++.... .-.+++|++++. .|.+|+-. .|++.+.
T Consensus 160 d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~--- 231 (349)
T cd08997 160 DPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKND---DLTEWKLL--PPLLEAN--- 231 (349)
T ss_pred cCCCCcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCC---CCCCcEEc--CccccCC---
Confidence 54 588999999875421 124567776642 25789875 5887643
Q ss_pred cCCCCCCCCCEEEEeCCCCeEEEEEeeecC-------CccEEEEEEcCCCC-CcEE
Q 010428 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKIN-------RKGLAILYRSKDFV-HWIK 225 (511)
Q Consensus 178 ~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~-------~~G~i~ly~S~Dl~-~W~~ 225 (511)
.. ...+..|.+ ++ .+|+|||+..++.. +...+..|.|+++. .|+.
T Consensus 232 ~v-~d~~E~P~v-~~-~~gk~yL~~s~~~~~~~~~~~~~~~~~g~vsdsl~GP~~~ 284 (349)
T cd08997 232 GV-NDELERPHV-VF-HNGKYYLFTISHRSTFAPGLSGPDGLYGFVSDSLRGPYKP 284 (349)
T ss_pred Cc-CCceEcceE-EE-ECCEEEEEEeCCcCccccccCCCCcEEEEEeCCCCCCCcc
Confidence 21 234789985 55 58999999875532 11246677888875 4654
No 62
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.00032 Score=75.81 Aligned_cols=141 Identities=22% Similarity=0.326 Sum_probs=80.4
Q ss_pred EEEEeCCCCcceecCCCCCCCCC-------ccCCCeEeeeEEEcCCCceEEEEeccCCCC---cceEEEEEecCCCCccc
Q 010428 90 AHSTSKDLINWIPHDPAIYPSQQ-------SDINGCWSGSATILPGEKPAIFYTGIDPHN---RQVQNLAVPKNLSDPYL 159 (511)
Q Consensus 90 gHa~S~DLvhW~~~~~aL~P~~~-------~D~~g~~SGsav~~~dg~~~l~YTg~~~~~---~q~q~lA~s~d~~d~~l 159 (511)
.-+.|+||+||+.....|.+... -+..|||.+++. .+||+++|+||...... ....+..++....+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 34679999999999776666532 245789999987 68999999998765421 11112222222111
Q ss_pred ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCC------ccEEEEEEcC---CCCCcEEccccc
Q 010428 160 REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINR------KGLAILYRSK---DFVHWIKAKHPL 230 (511)
Q Consensus 160 ~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~------~G~i~ly~S~---Dl~~W~~~~~~l 230 (511)
-.|.. |+..+- ..--||.++ .+++|+-||+.++...+ .|.++-+.++ -+..+.+ + .+
T Consensus 132 G~WsD----pi~l~~-------~~~iDPslf-~D~dGr~wlv~~~w~~~~~~~~~~~i~l~~~~~~~~~l~g~~~-~-~~ 197 (549)
T COG3507 132 GPWSD----PIKLNG-------SNAIDPSLF-FDKDGRKWLVNGSWDGGIFMHSFAGIILQEYDKTTQKLVGQGY-K-II 197 (549)
T ss_pred CCccc----ceecCC-------cCccCCcee-ecCCCCEEEEecccCCCcccccccceeeeeccccccccCCccc-e-eE
Confidence 23542 333221 123599954 55889999999876532 1232222221 1223321 1 12
Q ss_pred ccCCCCCceecCceEEec
Q 010428 231 HSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 231 ~~~~~~g~wECPdlf~l~ 248 (511)
.........|-|-+++.+
T Consensus 198 ~~G~~~~~~EGPhl~k~~ 215 (549)
T COG3507 198 FDGGNGGLTEGPHLYKKT 215 (549)
T ss_pred eccCCCccccCceeeccC
Confidence 222334578999888887
No 63
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00032 Score=70.72 Aligned_cols=114 Identities=15% Similarity=0.249 Sum_probs=83.3
Q ss_pred CCCCCC--CccCC----CeEeeeEEEcCCCceEEEEecc-----CCCCcceEEEEEecCCCCcccce-eeecCCCceecC
Q 010428 106 AIYPSQ--QSDIN----GCWSGSATILPGEKPAIFYTGI-----DPHNRQVQNLAVPKNLSDPYLRE-WVKSPKNPLMAP 173 (511)
Q Consensus 106 aL~P~~--~~D~~----g~~SGsav~~~dg~~~l~YTg~-----~~~~~q~q~lA~s~d~~d~~l~~-w~K~~~nPVi~~ 173 (511)
.|.|.. .+++. .+|.++++.. +++++|+|... +........+|.|+|+ .+ |++.+ +|++-+
T Consensus 13 Ii~~~~~~~~~~~~~~~~vFNpav~~~-~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P 85 (314)
T COG2152 13 IITRSDYIPPHARFIVVSVFNPAVVLV-GGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWP 85 (314)
T ss_pred ceeeccccCCCCceeEEEEecceeEEE-CCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEec
Confidence 455543 34555 7899998874 89999999872 2235567889999987 45 99874 788865
Q ss_pred -CCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEcCCCCCcEEccccc
Q 010428 174 -DAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRSKDFVHWIKAKHPL 230 (511)
Q Consensus 174 -p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl~~W~~~~~~l 230 (511)
. ..++.....||.|.. -+|+|+|.+.+..+...+..+.-++|+.+|++.+...
T Consensus 86 ~~--~~~e~~G~EDPRvt~--I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~ 139 (314)
T COG2152 86 AN--YPYEIYGIEDPRVTK--IGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIF 139 (314)
T ss_pred CC--CchhhhcccCceEEE--ECCEEEEEEEecCCCCcccchhhhhhhhhhhhccccc
Confidence 3 234556778999654 4799999999875444467788999999999887543
No 64
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.67 E-value=0.00028 Score=76.10 Aligned_cols=131 Identities=12% Similarity=0.127 Sum_probs=79.9
Q ss_pred eEEECCEEEEEeeeCC-CCC--CCCCc-EEEEEEeCCCCcceec--CCCCCCCCCccCCCeEeeeEEEcCCCceEEEEec
Q 010428 64 VMIYKGIYHLFYQYNP-KGA--VWGNI-VWAHSTSKDLINWIPH--DPAIYPSQQSDINGCWSGSATILPGEKPAIFYTG 137 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P-~~~--~~g~~-~WgHa~S~DLvhW~~~--~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg 137 (511)
++..+|+|||||.-+- ... ..+.. .-.+|+|+|+++|+.. .++|.+...+.....-.+.++..++|+++|++.+
T Consensus 74 av~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~ 153 (437)
T smart00640 74 AVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGA 153 (437)
T ss_pred EEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECCCCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEE
Confidence 4557888999999763 211 12222 2367889999999997 3666553322222333456655434689999987
Q ss_pred cCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC-----eEEEEEeee
Q 010428 138 IDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK-----RWRVIIGSK 205 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g-----~w~m~~ga~ 205 (511)
...+..-.+.++.|+| |++|+.. .++.... .+.....|.-|- +++ -++ +|+|+++..
T Consensus 154 ~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~--~~~~g~~wECPd-lf~-l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 154 SDEDKTGIALLYRSTD-----LKNWTLL--GELLHSG--VGDTGGMWECPD-LFP-LPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred EecCCCeEEEEEECCC-----cccCeEC--CcccccC--CCCccceEECCc-EEE-eCCCCCceeEEEEECcC
Confidence 6544445577788876 4899875 3555321 011113467786 343 344 899998875
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.65 E-value=0.002 Score=65.18 Aligned_cols=150 Identities=10% Similarity=0.169 Sum_probs=85.5
Q ss_pred CccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-c-----ceecCCCCCCCCCccCCCeEeeeEEEcCCCc
Q 010428 57 WINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-N-----WIPHDPAIYPSQQSDINGCWSGSATILPGEK 130 (511)
Q Consensus 57 w~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-h-----W~~~~~aL~P~~~~D~~g~~SGsav~~~dg~ 130 (511)
-+.-| -+++++|+|||||.....+. ....+|.|+|++.. - |+..++.+.+... +......+++++++||+
T Consensus 56 ~~WAP-~v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~ 131 (279)
T cd08988 56 HLWAP-DIYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQ 131 (279)
T ss_pred CEecc-eEEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCC
Confidence 35567 47889999999998775432 24578999999864 3 5443333333322 12345678888888899
Q ss_pred eEEEEeccCCCCcceEEEEEecCCCCcccceeeec-CCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec---
Q 010428 131 PAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKS-PKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI--- 206 (511)
Q Consensus 131 ~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~-~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~--- 206 (511)
+||+|..... ....+-++.|... .... ....++..+ . +.....-|+ +++ .+|+|||+.++..
T Consensus 132 ~Yl~~g~~~~---gi~~~eL~~d~~~-----~~~~~~~~~i~~~~--~--~~~~~Egp~-i~k-~~g~YYl~~S~g~~~~ 197 (279)
T cd08988 132 PWLSFGSFWG---GIKLFELDKDTMK-----PAEPGELHSIAGRE--R--SSAAIEAPF-ILY-RGDYYYLFVSFGLCCR 197 (279)
T ss_pred EEEEecccCC---CEEEEEECcccCC-----ccCCCcceEEeccC--C--CCCceEeeE-EEE-cCCeEEEEEEcCcccC
Confidence 9999964321 1222233333211 1000 001122221 1 112346787 566 5899999886542
Q ss_pred --CCccEEEEEEcCCCC-CcE
Q 010428 207 --NRKGLAILYRSKDFV-HWI 224 (511)
Q Consensus 207 --~~~G~i~ly~S~Dl~-~W~ 224 (511)
+..-++.+++|+++. -|+
T Consensus 198 ~~~~~y~v~~arS~~~~GPy~ 218 (279)
T cd08988 198 GGDSTYKIAVGRSKNITGPYL 218 (279)
T ss_pred CCCCCeEEEEEEeCCCCCCCC
Confidence 112357889999874 344
No 66
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=97.64 E-value=0.0039 Score=64.22 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=84.8
Q ss_pred cCCcceEEEC----CEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceec-CCCC-CCCC-Ccc-CCCeEeeeEEEcCCC
Q 010428 59 NDPNGVMIYK----GIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPH-DPAI-YPSQ-QSD-INGCWSGSATILPGE 129 (511)
Q Consensus 59 NDPnG~~~~~----G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~-~~aL-~P~~-~~D-~~g~~SGsav~~~dg 129 (511)
.-| -+++++ |+|+|||... ....|.|+|++.. .|+++ +..| .+.. ..+ ...+..+++++++||
T Consensus 79 WAP-~v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~DdDG 150 (311)
T cd09003 79 WAP-SIAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLITGSTPGCAGVVWLFDPAVFVDDDG 150 (311)
T ss_pred CCC-ceEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeeecCCCCCccCCccccCCCeEECCCC
Confidence 346 467888 9999999632 2358999999965 89975 3222 2211 111 112457888888899
Q ss_pred ceEEEEeccCC----CCcceEEEEEec-CCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEee
Q 010428 130 KPAIFYTGIDP----HNRQVQNLAVPK-NLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGS 204 (511)
Q Consensus 130 ~~~l~YTg~~~----~~~q~q~lA~s~-d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga 204 (511)
+.||+|.+... ...+...+|.-+ |. .+. .+.++.... + ..+.-|. +++ .+|+|||++++
T Consensus 151 ~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D~-----~~~---~g~~~~i~~--~----~~~Egp~-~~K-~~G~YYL~ys~ 214 (311)
T cd09003 151 QGYLYFGGGVPGGRWANPNTARVIKLGDDM-----ISV---DGSAVTIDA--P----YFFEASG-LHK-INGTYYYSYCT 214 (311)
T ss_pred CEEEEECCccCCCccccCCCEEEEEeCCCc-----eec---cCCceEccC--C----CceEeee-EEE-ECCEEEEEEeC
Confidence 99999975321 112234444333 32 222 223332211 1 2356787 466 68999998875
Q ss_pred ec-------CCccEEEEEEcCCCC-CcEEccc
Q 010428 205 KI-------NRKGLAILYRSKDFV-HWIKAKH 228 (511)
Q Consensus 205 ~~-------~~~G~i~ly~S~Dl~-~W~~~~~ 228 (511)
.- ....++.+++|++.. -|+..+.
T Consensus 215 ~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~ 246 (311)
T cd09003 215 NFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGI 246 (311)
T ss_pred CCCccCCCCCCceeEEEEEcCCCCCCcccCCE
Confidence 41 223466777887754 5776443
No 67
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.59 E-value=0.002 Score=64.81 Aligned_cols=134 Identities=12% Similarity=0.054 Sum_probs=80.8
Q ss_pred ccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEe
Q 010428 58 INDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYT 136 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YT 136 (511)
+.-| -+++.+|+|||||-.+. ...+.++|++.. .|++.+... ....+++++++||+.||+|.
T Consensus 76 ~WAP-~v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~ 138 (269)
T cd09001 76 QWAP-SLRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYG 138 (269)
T ss_pred EECC-ceEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeC
Confidence 4567 47889999999998751 135677777754 787765322 23457788878999999986
Q ss_pred ccCCCCcceEEEE-EecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEE
Q 010428 137 GIDPHNRQVQNLA-VPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILY 215 (511)
Q Consensus 137 g~~~~~~q~q~lA-~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly 215 (511)
+. .+.++ ++.|. ..... ....++..+ .. ......-|+ +++ .+|+|||++++.......+.++
T Consensus 139 ~~------~i~~~~l~~d~-----~~~~~-~~~~~~~~~--~~-~~~~~Egp~-i~k-~~G~YYl~~S~~~~~~~~~~~~ 201 (269)
T cd09001 139 GG------TIRLVELSPDL-----TGVGG-KDQVIIDAG--EE-IGLGAEGSH-LYK-INGYYYIFNIAWGGGGRTQTCL 201 (269)
T ss_pred CC------cEEEEEECccc-----CCcCC-CceEEEeCC--Cc-cccccccCe-EEE-ECCEEEEEEecCCCCCceEEEE
Confidence 53 23333 33332 22211 112233333 10 112356787 456 6899999988653223356788
Q ss_pred EcCCCC-CcEE
Q 010428 216 RSKDFV-HWIK 225 (511)
Q Consensus 216 ~S~Dl~-~W~~ 225 (511)
+|+++. -|+.
T Consensus 202 ~s~~~~GP~~~ 212 (269)
T cd09001 202 RSKSLTGPYES 212 (269)
T ss_pred EeCCCCCCcCC
Confidence 998864 3543
No 68
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.41 E-value=0.0036 Score=63.38 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=81.3
Q ss_pred CCCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCC-CCCCCCCccCC--CeEeeeEEEcCCCc
Q 010428 54 PKNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDP-AIYPSQQSDIN--GCWSGSATILPGEK 130 (511)
Q Consensus 54 ~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~-aL~P~~~~D~~--g~~SGsav~~~dg~ 130 (511)
...+..||+ ++.++|+++|||...-.....+..-|....+ |...+...+. ...|...|+.. ++.-|+.++..+|.
T Consensus 109 ~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~-~~~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G~ 186 (288)
T cd08980 109 TDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMS-NPWTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNGK 186 (288)
T ss_pred CCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECC-CCCccCCcceEecCCCCCceecCceeeECcEEEEECCE
Confidence 356778994 6667899999986432211112223443333 3334542222 23444445543 45667777777999
Q ss_pred eEEEEeccCC-CCcceEEEEEecCCCCccc-ceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCe-EEEEEeee
Q 010428 131 PAIFYTGIDP-HNRQVQNLAVPKNLSDPYL-REWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKR-WRVIIGSK 205 (511)
Q Consensus 131 ~~l~YTg~~~-~~~q~q~lA~s~d~~d~~l-~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~-w~m~~ga~ 205 (511)
+||+|.+... ...-..++|+++...+++- ..|+|. .+||+.......+. .--... ++..++|+ |||++=+.
T Consensus 187 yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~--g~GH~~-iv~~~~G~~~~~~yH~~ 260 (288)
T cd08980 187 VFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVY--GPGHNS-FTKSPDGTEDWIVYHAR 260 (288)
T ss_pred EEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccC--cCCccc-eEECCCCCEEEEEEccc
Confidence 9999998654 3344567788765433311 258886 47988643101111 112333 34556787 88887543
No 69
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=97.39 E-value=0.012 Score=57.75 Aligned_cols=185 Identities=16% Similarity=0.275 Sum_probs=102.5
Q ss_pred ccCCCCCc--cCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceecCCCCCCCCCccCCCeEeeeEEE-cC
Q 010428 51 FQPPKNWI--NDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPHDPAIYPSQQSDINGCWSGSATI-LP 127 (511)
Q Consensus 51 f~p~~gw~--NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~~~aL~P~~~~D~~g~~SGsav~-~~ 127 (511)
.+|+.||. .|| -+++++|+||+|....-.+..||.|..+ -+-+|.+..-|= ..--+. +.-.+.++. .+
T Consensus 16 ~~Pk~g~~slKD~-T~V~ynGk~~VyAtt~d~~~~y~sm~f~-----~Ftdws~~~sA~--q~~m~~-~~vAP~vFYFaP 86 (271)
T PF03664_consen 16 AQPKSGWVSLKDF-TIVPYNGKHHVYATTADTGGGYGSMNFG-----PFTDWSQMASAS--QNYMDQ-SAVAPQVFYFAP 86 (271)
T ss_pred ccCCCCceeccCc-eEEeECCEEEEEEEeccCCCccceEeee-----ccCCHHHhhccc--cccCCc-ccccceEEEecC
Confidence 45777886 599 5889999999999987555555544433 455787765432 111121 122233322 25
Q ss_pred CCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecC
Q 010428 128 GEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKIN 207 (511)
Q Consensus 128 dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~ 207 (511)
.+.+||.|.-... .-...++.|.++| ..|... .|++... ..+ .....-|..||- ++..-||+.+..
T Consensus 87 k~~W~L~yQwg~~----~fsY~Ts~Dptnp--ngWSap--q~lf~g~-i~~-~~~g~iD~~vI~--D~~n~yLFfa~D-- 152 (271)
T PF03664_consen 87 KNIWYLAYQWGPA----AFSYSTSSDPTNP--NGWSAP--QPLFSGS-ISG-SGTGPIDQWVIC--DDTNMYLFFAGD-- 152 (271)
T ss_pred CcEEEEEEecCCC----cceeecCCCCCCC--ccCCCC--ccccccc-ccC-CCCCceeeEEEe--cCCceEEEEcCC--
Confidence 7778888863221 1123456676666 468763 4665321 011 123457988653 344556666542
Q ss_pred CccEEEEEEcCC-CCCcEE-cc---cccccCCCCCceecCceEEeccCCCCCccccCCCCCceeEEEEeeCC
Q 010428 208 RKGLAILYRSKD-FVHWIK-AK---HPLHSVKGTGMWECPDFFPVSTYGLNGLDTSDMGPNTKHVLKVSLDD 274 (511)
Q Consensus 208 ~~G~i~ly~S~D-l~~W~~-~~---~~l~~~~~~g~wECPdlf~l~~~g~~g~~~s~~~~~~k~vL~~S~~~ 274 (511)
.|. ||||.- +.+.-. .+ ..+.+......+|.++++++. |. .++.|++...+
T Consensus 153 -nGk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~--G~-----------~~YLmiVEaiG 208 (271)
T PF03664_consen 153 -NGK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVK--GQ-----------NQYLMIVEAIG 208 (271)
T ss_pred -CCc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEc--CC-----------ceEEEEEEEec
Confidence 353 788743 222210 01 112222234589999999997 41 27777776543
No 70
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.22 E-value=0.012 Score=59.54 Aligned_cols=146 Identities=14% Similarity=0.014 Sum_probs=85.4
Q ss_pred CCCccCCcceEEECCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC-cceecCCCCCCCCCccCCCeEeeeEEEcCCCceEE
Q 010428 55 KNWINDPNGVMIYKGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI-NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAI 133 (511)
Q Consensus 55 ~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv-hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l 133 (511)
.+-+.-| -+++.+|+|||||...... +....+.++|+|.- -|++. .+.+. .+..++++.++||+.||
T Consensus 65 ~~~~WAP-~v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~~--~~~~~------~~iDp~vf~d~dG~~Y~ 132 (288)
T cd09000 65 SGGIWAP-TIRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSDP--VWLDS------GGIDPSLFFDDDGKVYL 132 (288)
T ss_pred CCceEcc-eEEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcCC--EecCC------CccCCceeEcCCCCEEE
Confidence 3445567 4788999999999976532 23456678898873 68742 12221 34568888877899999
Q ss_pred EEeccCCC----CcceEEEEEecCCCCcccceeeecCCCc--eecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeec-
Q 010428 134 FYTGIDPH----NRQVQNLAVPKNLSDPYLREWVKSPKNP--LMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKI- 206 (511)
Q Consensus 134 ~YTg~~~~----~~q~q~lA~s~d~~d~~l~~w~K~~~nP--Vi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~- 206 (511)
+|...... ....+.++..+.. .++- ...| +.... . .....-|. +++ .+|+|||++....
T Consensus 133 ~~~~~~~~~~~~~~~~i~~~~l~~~------~~~~-~~~~~~~~~~~--~---~~~~Egp~-v~k-~~g~YYl~ys~~~~ 198 (288)
T cd09000 133 VGNGWDERRGYNGHGGIWLQEIDLE------TGKL-LGEPKVIWNGT--G---GRWPEGPH-LYK-RDGWYYLLIAEGGT 198 (288)
T ss_pred EecccCCccccCCCCcEEEEEEccc------cCCC-CCCcEEEEeCC--C---CCCcccCe-EEE-ECCEEEEEEecCCC
Confidence 88653221 1233444433221 1221 1222 22111 0 12345787 466 6899999986543
Q ss_pred CCccEEEEEEcCCCC-CcEEc
Q 010428 207 NRKGLAILYRSKDFV-HWIKA 226 (511)
Q Consensus 207 ~~~G~i~ly~S~Dl~-~W~~~ 226 (511)
...-.+.+++|+++. .|+..
T Consensus 199 ~~~~~v~~~~s~~~~Gp~~~~ 219 (288)
T cd09000 199 GYGHSVTVARSRSITGPYEPA 219 (288)
T ss_pred CCCeEEEEEEeCCCCCCCccC
Confidence 222367889999986 67653
No 71
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.01 E-value=0.022 Score=59.06 Aligned_cols=165 Identities=16% Similarity=0.254 Sum_probs=97.9
Q ss_pred CCCCccccccCC---CCCccCCcceEEEC-CEEEEEeeeCCCCC-------CCCCcEEEEEEeCCC-CcceecCCCCCCC
Q 010428 43 QPYRTGYHFQPP---KNWINDPNGVMIYK-GIYHLFYQYNPKGA-------VWGNIVWAHSTSKDL-INWIPHDPAIYPS 110 (511)
Q Consensus 43 ~~~Rp~yHf~p~---~gw~NDPnG~~~~~-G~YHLFYQ~~P~~~-------~~g~~~WgHa~S~DL-vhW~~~~~aL~P~ 110 (511)
..|.+.--+... ...+.||. ++... |+.+|||...+... .+...+..+..|+|. .+|... ..|.+.
T Consensus 58 ~tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~p-~~l~~~ 135 (351)
T cd00260 58 KTWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSSP-RDLTPS 135 (351)
T ss_pred CcccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecCC-ccCCcc
Confidence 355554333332 24567894 66666 99999999887642 223556778888886 899753 333333
Q ss_pred CC-ccCCCeE--eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCC
Q 010428 111 QQ-SDINGCW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDP 187 (511)
Q Consensus 111 ~~-~D~~g~~--SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP 187 (511)
.. .+-...+ .|+.++..+|++++.+.+....+.....+.+|+|.+ ++|+... ++ .. ......|
T Consensus 136 ~~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~-~~-------~~~~~e~ 201 (351)
T cd00260 136 VKGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV-ND-------AGGCSEC 201 (351)
T ss_pred ccCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC-CC-------CCCCcCC
Confidence 21 0111222 234555668998776554433344566777888875 7997632 11 11 0123467
Q ss_pred EEEEeCCCCeEEEEEeeecCCccEEEEEEcCCC-CCcEEc
Q 010428 188 TTAWLGPDKRWRVIIGSKINRKGLAILYRSKDF-VHWIKA 226 (511)
Q Consensus 188 ~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~ 226 (511)
.++-. .+|..+|+..... .+.+.++.|.|. .+|+..
T Consensus 202 ~i~el-~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~ 238 (351)
T cd00260 202 SVVEL-SDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEA 238 (351)
T ss_pred EEEEe-cCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccC
Confidence 75543 5888888766542 466778888775 899854
No 72
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.00 E-value=0.0052 Score=61.25 Aligned_cols=148 Identities=19% Similarity=0.294 Sum_probs=87.8
Q ss_pred ccCCcceEE-ECCEEEEEeeeCCCCCCCCCcEEEEEEeCC-CCcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEE-
Q 010428 58 INDPNGVMI-YKGIYHLFYQYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIF- 134 (511)
Q Consensus 58 ~NDPnG~~~-~~G~YHLFYQ~~P~~~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~- 134 (511)
..||. +++ .+|+.||||........|......+.+|+| ..+|+... .|.+.......+...+.++...+|++++-
T Consensus 48 ~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~~~~~i~~~~G~l~~~~ 125 (275)
T PF13088_consen 48 YGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPGRGPPIQLPDGRLIAPY 125 (275)
T ss_dssp EEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECSEEEEEEECTTEEEEEE
T ss_pred ccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccceeeeeEecCCCEEEEE
Confidence 45784 444 599999999766655555555555599999 89999764 22222111223444555556678887775
Q ss_pred EeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEE
Q 010428 135 YTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAIL 214 (511)
Q Consensus 135 YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~l 214 (511)
|.. ........+.+|+|++ ++|+... ++... ...--|.++.. .+|..+|++... ..+.+.+
T Consensus 126 ~~~--~~~~~~~~~~~S~D~G----~tW~~~~--~~~~~--------~~~~e~~~~~~-~dG~l~~~~R~~--~~~~~~~ 186 (275)
T PF13088_consen 126 YHE--SGGSFSAFVYYSDDGG----KTWSSGS--PIPDG--------QGECEPSIVEL-PDGRLLAVFRTE--GNDDIYI 186 (275)
T ss_dssp EEE--SSCEEEEEEEEESSTT----SSEEEEE--ECECS--------EEEEEEEEEEE-TTSEEEEEEEEC--SSTEEEE
T ss_pred eec--cccCcceEEEEeCCCC----ceeeccc--ccccc--------CCcceeEEEEC-CCCcEEEEEEcc--CCCcEEE
Confidence 433 1233566778899875 8998752 22110 01224443333 688888877653 2236778
Q ss_pred EEcCC-CCCcEEc
Q 010428 215 YRSKD-FVHWIKA 226 (511)
Q Consensus 215 y~S~D-l~~W~~~ 226 (511)
++|.| ..+|+..
T Consensus 187 ~~S~D~G~TWs~~ 199 (275)
T PF13088_consen 187 SRSTDGGRTWSPP 199 (275)
T ss_dssp EEESSTTSS-EEE
T ss_pred EEECCCCCcCCCc
Confidence 88877 7899863
No 73
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=96.64 E-value=0.03 Score=57.31 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=48.7
Q ss_pred CeEeeeEEEcCCCceEEEEeccCCC-CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 117 GCWSGSATILPGEKPAIFYTGIDPH-NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 117 g~~SGsav~~~dg~~~l~YTg~~~~-~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
++.-|..+...+|++||+|++.... ..-.+.+|+|++..+ .|++...|||+..+ .+. ...--...+ ++..+
T Consensus 159 ~~~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p~G----P~~~~~~~pil~~~--~~~-~~g~GH~s~-v~~~~ 230 (295)
T cd08982 159 PWMEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSPLG----PFTYQPHNPFSYKP--GGF-ITGAGHGST-FQDKY 230 (295)
T ss_pred ccccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCCCC----CCCcCCCCccccCC--CCe-EecCCcccE-EECCC
Confidence 3556777777899999999865432 223567889887644 46665578988644 210 011122333 45577
Q ss_pred CeEEEEEee
Q 010428 196 KRWRVIIGS 204 (511)
Q Consensus 196 g~w~m~~ga 204 (511)
|.||++.=+
T Consensus 231 G~~~~~yh~ 239 (295)
T cd08982 231 GNYWHVGTM 239 (295)
T ss_pred CCEEEEEEE
Confidence 888887643
No 74
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=96.45 E-value=0.1 Score=53.05 Aligned_cols=144 Identities=13% Similarity=0.203 Sum_probs=80.1
Q ss_pred ccCCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCC---cceecCCCCCCCCCccCCCeEeeeEEEcCCCceE
Q 010428 58 INDPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLI---NWIPHDPAIYPSQQSDINGCWSGSATILPGEKPA 132 (511)
Q Consensus 58 ~NDPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLv---hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~ 132 (511)
..-|. ++|+ +++|+|+||+.+ ...++|+|.. .|....+.+.........|...-.+ +.+|+++|
T Consensus 78 fwAPq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~Y 146 (303)
T cd08987 78 RVAPQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCY 146 (303)
T ss_pred cccCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEE
Confidence 34674 6655 599999999732 5689999975 5876655443322222234444555 56789999
Q ss_pred EEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCC--eEEEEEeeecCCcc
Q 010428 133 IFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDK--RWRVIIGSKINRKG 210 (511)
Q Consensus 133 l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g--~w~m~~ga~~~~~G 210 (511)
||+.+-+. .+..|-...+ .|-....+++.... .+....-|.-|.| ++ .+| +|+|++-+.....+
T Consensus 147 Lff~~dnG----~iyra~~~~~------nFp~~~~~~~~~~~--~~~~~~lfEa~~V-yk-v~G~~~YlmiveA~g~~~~ 212 (303)
T cd08987 147 LFFSDDNG----KLYRSSTTLG------NFPNGGTETVIIMS--DSNKNNLFEASNV-YK-VKGQNQYLLIVEAIGSDGG 212 (303)
T ss_pred EEEecCCC----eEEEEecchh------hCCCCCCccEEEec--CCCccccceeeEE-EE-ECCCeEEEEEEEecCCCCC
Confidence 99987432 3444433221 12111122332111 0111245778874 55 455 99999987642112
Q ss_pred E-EEEEEcCCCC-CcEEc
Q 010428 211 L-AILYRSKDFV-HWIKA 226 (511)
Q Consensus 211 ~-i~ly~S~Dl~-~W~~~ 226 (511)
+ ..-++|+.|- .|+..
T Consensus 213 rYfrs~Ts~Sl~GpWt~~ 230 (303)
T cd08987 213 RYFRSWTATSLDGPWTPL 230 (303)
T ss_pred CeEEEEEcCCCCCCceec
Confidence 1 1226677764 79875
No 75
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.96 E-value=0.14 Score=52.60 Aligned_cols=114 Identities=18% Similarity=0.183 Sum_probs=68.5
Q ss_pred EEcCCCceEEEEeccCC---CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEE
Q 010428 124 TILPGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRV 200 (511)
Q Consensus 124 v~~~dg~~~l~YTg~~~---~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m 200 (511)
++..+|+|+|||--+.. .+...-+.|+|+| |++|+.. .++|.+. ..++....-...++.. ++.++|
T Consensus 15 ~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~--~~aL~P~--~~~d~~g~~SGs~~~~--~~~~~~ 83 (308)
T PF00251_consen 15 LVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKD-----LVHWEHL--PVALPPD--EEYDADGCFSGSAVVD--DDNLVL 83 (308)
T ss_dssp EEEETTEEEEEEEEETTSSSS-SBEEEEEEESS-----SSSEEEE--EEEE-SS--SGGGTTEEEEEEEEEE--TTCEEE
T ss_pred CeEeCCEEEEEeccCCCCcccceeEEEEEECCC-----CCCceeC--CceEccc--ccCCcCccCcceEEEE--CCEEEE
Confidence 34469999999976543 1345678999998 4899986 3666544 2222222223333333 447888
Q ss_pred EEeeecC-CccEEEEEEc-CCCCCcEEcc--cccccC---CCCCceecCceEEec
Q 010428 201 IIGSKIN-RKGLAILYRS-KDFVHWIKAK--HPLHSV---KGTGMWECPDFFPVS 248 (511)
Q Consensus 201 ~~ga~~~-~~G~i~ly~S-~Dl~~W~~~~--~~l~~~---~~~g~wECPdlf~l~ 248 (511)
++.+... ......++.| +|..+|+... .|+... ....-|.=|.+|-..
T Consensus 84 ~YTg~~~~~~~~q~~A~s~d~~~~w~k~~~~~pvi~~~p~~~~~~~RDP~v~~~~ 138 (308)
T PF00251_consen 84 FYTGNNRDGKQVQCLAYSTDDGITWTKYPQGNPVIPEPPPGDTTDFRDPKVFWRE 138 (308)
T ss_dssp EEEEEETTTEEEEEEEEESSTTSSEEE-TTTCESBESSSTTSCTSEEEEEEEEEC
T ss_pred EEeccCCCCCeEEEEEEECCCCCceEEcCCCCcEEEecccCCCCccccCeEEEec
Confidence 8876653 2344556777 8899999864 455432 123357777776544
No 76
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=95.85 E-value=0.22 Score=49.48 Aligned_cols=161 Identities=15% Similarity=0.076 Sum_probs=85.1
Q ss_pred CEEEEEeeeCCCCCCCCCcEEEEEEe--CCC-CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCCC---C
Q 010428 69 GIYHLFYQYNPKGAVWGNIVWAHSTS--KDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDPH---N 142 (511)
Q Consensus 69 G~YHLFYQ~~P~~~~~g~~~WgHa~S--~DL-vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~~---~ 142 (511)
|+...++.. +...+.....-..| +|. .+|.....+..+. -....+..++++.+++|+++|+|+..... .
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~v~~~~--~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRIVADGP--KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEEEETST--BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEEEeecc--ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 456666665 33344444544555 987 8899865444333 11245677777766799999999544321 1
Q ss_pred cceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEEEEEc-CCCC
Q 010428 143 RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAILYRS-KDFV 221 (511)
Q Consensus 143 ~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ly~S-~Dl~ 221 (511)
.......+|.|++ ++|.+.. .|...+ ........+.+- +-. .+|.+++..-........+.++.| +..+
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~--~~~~~~~~~~~~-i~~-~~G~l~~~~~~~~~~~~~~~~~~S~D~G~ 145 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGW--FGNFSGPGRGPP-IQL-PDGRLIAPYYHESGGSFSAFVYYSDDGGK 145 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHC--CCSCEECSEEEE-EEE-CTTEEEEEEEEESSCEEEEEEEEESSTTS
T ss_pred ceeEEEEEECCCC----CCCCCcc--cccccc--ccceeccceeee-eEe-cCCCEEEEEeeccccCcceEEEEeCCCCc
Confidence 2222338899875 8999753 333221 111111233432 333 588877763222223344555555 5578
Q ss_pred CcEEcccccccCCCCCceecCceEEec
Q 010428 222 HWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 222 ~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.|+.... +. .....--|.++++.
T Consensus 146 tW~~~~~-~~---~~~~~~e~~~~~~~ 168 (275)
T PF13088_consen 146 TWSSGSP-IP---DGQGECEPSIVELP 168 (275)
T ss_dssp SEEEEEE-CE---CSEEEEEEEEEEET
T ss_pred eeecccc-cc---ccCCcceeEEEECC
Confidence 9987543 21 11122236666665
No 77
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.98 E-value=5 Score=41.49 Aligned_cols=171 Identities=13% Similarity=0.096 Sum_probs=91.3
Q ss_pred eEEECCEEEEEeeeCCC-CCCCC-CcEEEEEEeCCC-CcceecCCCCCCCCCccCCCeEeeeEEEcCCCceEEEEeccCC
Q 010428 64 VMIYKGIYHLFYQYNPK-GAVWG-NIVWAHSTSKDL-INWIPHDPAIYPSQQSDINGCWSGSATILPGEKPAIFYTGIDP 140 (511)
Q Consensus 64 ~~~~~G~YHLFYQ~~P~-~~~~g-~~~WgHa~S~DL-vhW~~~~~aL~P~~~~D~~g~~SGsav~~~dg~~~l~YTg~~~ 140 (511)
++..++..-.|+-.... ....+ .+....+.|.|. .+|.... ++..... ....++.++.+.+.+|+++|||.....
T Consensus 21 l~~~~~~lla~~e~r~~~~~D~~~~~~iv~~~S~D~G~tW~~~~-~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~ 98 (351)
T cd00260 21 LVCTPGTLLAFADARYGGCSDRSNAIDIVARRSTDGGKTWSPST-VISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPN 98 (351)
T ss_pred EEEECCEEEEEEEEEEcCCCCCCcccceeEEEeccCCCcccccE-EehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCC
Confidence 33344444444442222 22344 567888889874 8999863 3333322 234577888887544899999977543
Q ss_pred C----------CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCE-EEEeCCCCeEEEEEeeecCC-
Q 010428 141 H----------NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPT-TAWLGPDKRWRVIIGSKINR- 208 (511)
Q Consensus 141 ~----------~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~-vvw~~~~g~w~m~~ga~~~~- 208 (511)
. ....+.+..|+|.+ .+|.+. ..+........+ ..-++-|- .+-. ++|+++|.+-.....
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~S~D~G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~l-~~Grlv~p~~~~~~~~ 170 (351)
T cd00260 99 GEGEDNDYAGPSNAYLVLVYSDDDG----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQM-KDGRLVFPVYGGNAGG 170 (351)
T ss_pred cccccccccCCCceEEEEEEEEcCC----ceecCC--ccCCccccCcce-eEEEecCcCeEEe-cCCcEEEEEEEEcCCC
Confidence 1 23467788898875 799863 222221100011 11123331 1223 478887766544322
Q ss_pred -ccEEEEEEcCCCCCcEEcccccccCCCCCceecCceEEec
Q 010428 209 -KGLAILYRSKDFVHWIKAKHPLHSVKGTGMWECPDFFPVS 248 (511)
Q Consensus 209 -~G~i~ly~S~Dl~~W~~~~~~l~~~~~~g~wECPdlf~l~ 248 (511)
.-...+|..++.++|+.. ..... ..++.| |.++++.
T Consensus 171 ~~~~~~~~S~D~G~tW~~~-~~~~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 171 RVSSAIIYSDDSGKTWKLG-EGVND--AGGCSE-CSVVELS 207 (351)
T ss_pred CEEEEEEEECCCCCCcEEC-CCCCC--CCCCcC-CEEEEec
Confidence 223445555667999863 32211 123445 7788885
No 78
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=93.57 E-value=0.39 Score=49.64 Aligned_cols=148 Identities=16% Similarity=0.210 Sum_probs=70.4
Q ss_pred CCcceEEECCEEEEEe-eeCCCCCCCCCcEEEEEEeCC-CCcceecCCCCCCC-CCccCCCeE--eeeEEEcCCCceEEE
Q 010428 60 DPNGVMIYKGIYHLFY-QYNPKGAVWGNIVWAHSTSKD-LINWIPHDPAIYPS-QQSDINGCW--SGSATILPGEKPAIF 134 (511)
Q Consensus 60 DPnG~~~~~G~YHLFY-Q~~P~~~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~-~~~D~~g~~--SGsav~~~dg~~~l~ 134 (511)
.|-- +..++..+|+- .|+... ....-..-++.|+| .+.|.+....+... +... ... -||.|+.+||++++=
T Consensus 62 rPTt-vvkgn~IymLvG~y~~~~-~~~~~~llLvks~~~g~~W~~~~~l~~~~~~~~~--~figgGGSGV~m~dGTLVFP 137 (310)
T PF13859_consen 62 RPTT-VVKGNKIYMLVGSYSRSA-GADDWGLLLVKSTDGGIKWGDTKSLPSTSFQSWK--QFIGGGGSGVVMEDGTLVFP 137 (310)
T ss_dssp EEEE-EEETTEEEEEEEEESS---SSTTEEEEEEEEESSSSEE---EE-GGGS-EEEE--EEEE-SEE-EE-TTS-EEEE
T ss_pred eeee-eecceeEEEEEEEEeccc-cccccceeeeeccCCcceeeecccCCchhccccc--eeecCCCCceEEcCCCEEEE
Confidence 5643 33455555554 455321 11111223456665 46898653221111 1111 111 156667789998876
Q ss_pred EeccCCCCc-ceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeeecCCccEEE
Q 010428 135 YTGIDPHNR-QVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSKINRKGLAI 213 (511)
Q Consensus 135 YTg~~~~~~-q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~~~~~G~i~ 213 (511)
-.+...... ..-.|.+|+|.+ .+|+-..+ ......+||.|+.. ++|+-.|+.... .|+-.
T Consensus 138 v~a~~~~~~~~~SlIiYS~d~g----~~W~lskg-----------~s~~gC~~psv~EW-e~gkLlM~~~c~---~g~rr 198 (310)
T PF13859_consen 138 VQATKKNGDGTVSLIIYSTDDG----KTWKLSKG-----------MSPAGCSDPSVVEW-EDGKLLMMTACD---DGRRR 198 (310)
T ss_dssp EEEEETT---EEEEEEEESSTT----SS-EE-S---------------TT-EEEEEEEE--TTEEEEEEE-T---TS---
T ss_pred EeeeccCccceEEEEEEECCCc----cceEeccc-----------cCCCCcceEEEEec-cCCeeEEEEecc---cceEE
Confidence 666555444 366778998854 68875421 22245789998766 578888776542 35557
Q ss_pred EEEcCCC-CCcEEccccc
Q 010428 214 LYRSKDF-VHWIKAKHPL 230 (511)
Q Consensus 214 ly~S~Dl-~~W~~~~~~l 230 (511)
+|+|.|. ..|+..-..|
T Consensus 199 VYeS~DmG~tWtea~gtl 216 (310)
T PF13859_consen 199 VYESGDMGTTWTEALGTL 216 (310)
T ss_dssp EEEESSTTSS-EE-TTTT
T ss_pred EEEEcccceehhhccCcc
Confidence 9999886 6899744333
No 79
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=92.09 E-value=0.08 Score=43.62 Aligned_cols=37 Identities=30% Similarity=0.284 Sum_probs=30.9
Q ss_pred cccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEecCCCCcc
Q 010428 443 LGPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMCSDQSRSL 486 (511)
Q Consensus 443 ~g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~~d~~~Ss 486 (511)
..+||+.++++++..|.|.|+|+.... .|++||++|+
T Consensus 8 ~~~~g~~l~~s~~~~e~~~i~~d~~~~-------~l~vDR~~s~ 44 (86)
T PF08244_consen 8 ADSFGLRLRASNDGGEETSIGYDPANG-------TLTVDRTNSG 44 (86)
T ss_dssp ECEEEEEEEEETTSSSEEEEEEETTTT-------EEEEEETTSS
T ss_pred CCCeEEEEEECCCccEEEEEEEECCCC-------EEEEeCCCCc
Confidence 357999999999999999999985422 2788999998
No 80
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=88.11 E-value=8.6 Score=42.43 Aligned_cols=149 Identities=12% Similarity=0.082 Sum_probs=76.4
Q ss_pred CCCCCccCCcceEEECCEEEEEeeeCCCCC-CCCCcEEEEEEeCCCC--cceecCCCCCCCCCccCCCeEeeeEEEcCCC
Q 010428 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGA-VWGNIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSATILPGE 129 (511)
Q Consensus 53 p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~-~~g~~~WgHa~S~DLv--hW~~~~~aL~P~~~~D~~g~~SGsav~~~dg 129 (511)
|-.|=+.-|+ +.|+||+|+|+|.--+... .|-+++-- .+|.+-+ .|.+. +..+.. +.+.+|.+.++||
T Consensus 86 ~~S~giWAPd-l~y~dGkfwl~ytdvk~~~g~~k~~~ny-l~t~~s~~G~WsDp--i~l~~~-----~~iDPslf~D~dG 156 (549)
T COG3507 86 PYSGGIWAPD-LSYHDGKFWLYYTDVKRSGGPYKNAGNY-LVTAESIDGPWSDP--IKLNGS-----NAIDPSLFFDKDG 156 (549)
T ss_pred CCCCceeccc-eecCCCcEEEEEecccccCCcccccccE-EEEecCCCCCcccc--eecCCc-----CccCCceeecCCC
Confidence 4455566674 7899999999995433322 22222222 3333332 46542 111211 2567888888999
Q ss_pred ceEEEEeccCCC--CcceEEEEEecCCCCcccceeeecCC--CceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEeee
Q 010428 130 KPAIFYTGIDPH--NRQVQNLAVPKNLSDPYLREWVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIGSK 205 (511)
Q Consensus 130 ~~~l~YTg~~~~--~~q~q~lA~s~d~~d~~l~~w~K~~~--nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~ga~ 205 (511)
+.+|+|-+.+.. ....-.+-.+... .+=.|..+ -.++- .+.+..--.-|. +.+ ++|-|||+++-+
T Consensus 157 r~wlv~~~w~~~~~~~~~~~i~l~~~~-----~~~~~l~g~~~~~~~----~G~~~~~~EGPh-l~k-~~gYYYL~~a~g 225 (549)
T COG3507 157 RKWLVNGSWDGGIFMHSFAGIILQEYD-----KTTQKLVGQGYKIIF----DGGNGGLTEGPH-LYK-KTGYYYLYVAEG 225 (549)
T ss_pred CEEEEecccCCCcccccccceeeeecc-----ccccccCCccceeEe----ccCCCccccCce-eec-cCCEEEEEEEcC
Confidence 999999987642 1111111111110 00011111 11111 111122334675 566 788888887654
Q ss_pred c-CCcc-EEEEEEcCCCC
Q 010428 206 I-NRKG-LAILYRSKDFV 221 (511)
Q Consensus 206 ~-~~~G-~i~ly~S~Dl~ 221 (511)
. ...| .+.++||+.+.
T Consensus 226 G~t~~gh~~~vaRSKsid 243 (549)
T COG3507 226 GLTTYGHAIRVARSKSID 243 (549)
T ss_pred CCCccceeEEEEeccCCC
Confidence 3 3333 57899998864
No 81
>PTZ00334 trans-sialidase; Provisional
Probab=88.05 E-value=8.4 Score=44.53 Aligned_cols=152 Identities=16% Similarity=0.241 Sum_probs=84.3
Q ss_pred ccCCcceEEECCEEEEEeeeC--CC--------CCCCC-CcEEEEEEeC-----CCCcceecCCCCCCCC-C--ccC-CC
Q 010428 58 INDPNGVMIYKGIYHLFYQYN--PK--------GAVWG-NIVWAHSTSK-----DLINWIPHDPAIYPSQ-Q--SDI-NG 117 (511)
Q Consensus 58 ~NDPnG~~~~~G~YHLFYQ~~--P~--------~~~~g-~~~WgHa~S~-----DLvhW~~~~~aL~P~~-~--~D~-~g 117 (511)
.-.|--++.-+..|=|-=-|+ .. ...|+ ....|+++-. .-|+|.+. ..|.... . ... .+
T Consensus 179 v~rPTTvvKGn~VfmLvG~y~~~~~~~~~~~~~~~~~~l~Lv~G~Vt~~~~~~~k~I~W~~~-~~l~~~~~~~~~~~l~~ 257 (780)
T PTZ00334 179 VSRPTTVVNGSDIYMFAGTYSFEVTDKAGNTAAAAKWGLLVAVGNVSNDGSSGKKKIYWKDA-SVIPWTDFEKQHESLTR 257 (780)
T ss_pred ccCCeEEeeCCEEEEEecccccccccccccccccCCCccEEEEEEeecCCCCCcceEECcCc-ccCCcccccccccccee
Confidence 456766665555555552221 11 12344 4567888632 24999773 2331111 1 010 11
Q ss_pred eE--eeeEEEcCCCceEEEEeccCCCCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCC
Q 010428 118 CW--SGSATILPGEKPAIFYTGIDPHNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPD 195 (511)
Q Consensus 118 ~~--SGsav~~~dg~~~l~YTg~~~~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~ 195 (511)
.+ -||.|+.+||++++=-.+.+.++...-.|.+|+|.+ +|+=. .+......+||.|+-. ++
T Consensus 258 ~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS~d~g-----~W~ls-----------~g~s~~gC~~P~I~EW-e~ 320 (780)
T PTZ00334 258 LIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYSSATE-----SGNLS-----------KGMSADGCSDPSVVEW-KE 320 (780)
T ss_pred ecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEecCCC-----CeEEc-----------CCCCCCCCCCCEEEEE-cC
Confidence 11 155666789997765555544455556677888752 47532 1222345799997755 56
Q ss_pred CeEEEEEeeecCCccEEEEEEcCCC-CCcEEccccc
Q 010428 196 KRWRVIIGSKINRKGLAILYRSKDF-VHWIKAKHPL 230 (511)
Q Consensus 196 g~w~m~~ga~~~~~G~i~ly~S~Dl-~~W~~~~~~l 230 (511)
|+-.|+.... .|+=.+|+|.|. ..|+..-..|
T Consensus 321 gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlGTL 353 (780)
T PTZ00334 321 GKLMMMTACD---DGRRRVYESGDKGDSWTEALGTL 353 (780)
T ss_pred CeEEEEEEeC---CCCEEEEEECCCCCChhhCCCcc
Confidence 7877766543 244479999886 6898654333
No 82
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=86.45 E-value=44 Score=34.67 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=84.0
Q ss_pred CCcceEEECCEEEEEeeeCCC-C---CCCCCcEEEEEEeCC-CCcceecCCCCCCCCCccCCCe------EeeeEEEcCC
Q 010428 60 DPNGVMIYKGIYHLFYQYNPK-G---AVWGNIVWAHSTSKD-LINWIPHDPAIYPSQQSDINGC------WSGSATILPG 128 (511)
Q Consensus 60 DPnG~~~~~G~YHLFYQ~~P~-~---~~~g~~~WgHa~S~D-LvhW~~~~~aL~P~~~~D~~g~------~SGsav~~~d 128 (511)
=|.+.|-.+|+-+|.|+..-. + ..|..-.=+.+.|+| ..+|+..+..+.+....- .|+ |.-++....|
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~d 174 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKDD 174 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCCC
Confidence 388889999999999996521 1 123333447899999 689999986666654111 111 2223333345
Q ss_pred CceEEEEeccCCCCcceEEEEEe-cC-CCCcc------cce--eeecCC--CceecCCCCCcCCCCCCCCCEEEEeCCCC
Q 010428 129 EKPAIFYTGIDPHNRQVQNLAVP-KN-LSDPY------LRE--WVKSPK--NPLMAPDAMNQINTSSFRDPTTAWLGPDK 196 (511)
Q Consensus 129 g~~~l~YTg~~~~~~q~q~lA~s-~d-~~d~~------l~~--w~K~~~--nPVi~~p~~~~~~~~~fRDP~vvw~~~~g 196 (511)
|-.|+|=|...+ .....||.- .+ -.|+. ... |.+... .||+..+ +---.|.|.+..|
T Consensus 175 gyVYv~gt~~~R--~g~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~---------vgElSv~~~~~~g 243 (316)
T PF13810_consen 175 GYVYVYGTPFGR--NGGVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGP---------VGELSVRYNEYLG 243 (316)
T ss_pred CEEEEEeCCCCC--CCcEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCC---------ccceEEEEeCCCC
Confidence 655555554432 222333322 11 11100 012 543211 3555332 1223466766689
Q ss_pred eEEEEEeeecCCccEEEEEEcCCCC-CcEE
Q 010428 197 RWRVIIGSKINRKGLAILYRSKDFV-HWIK 225 (511)
Q Consensus 197 ~w~m~~ga~~~~~G~i~ly~S~Dl~-~W~~ 225 (511)
+|+|+.... ..+.|.+.++++.. .|..
T Consensus 244 k~Vl~~~~~--~~~~I~~RtA~~P~GpWs~ 271 (316)
T PF13810_consen 244 KWVLSYFDA--GTGGIVLRTAPSPTGPWSE 271 (316)
T ss_pred EEEEEEecc--cCCcEEEEecCCCCCCCCC
Confidence 999988643 33568888888887 5863
No 83
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=81.18 E-value=9.6 Score=37.15 Aligned_cols=102 Identities=25% Similarity=0.438 Sum_probs=61.6
Q ss_pred eEEECC-EEEEEeeeCCCCCCCCCcEEEEEEeCCCCcceec--CCCC-CCCCCccCCCeE--eeeEEEcCCCceEEEEec
Q 010428 64 VMIYKG-IYHLFYQYNPKGAVWGNIVWAHSTSKDLINWIPH--DPAI-YPSQQSDINGCW--SGSATILPGEKPAIFYTG 137 (511)
Q Consensus 64 ~~~~~G-~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvhW~~~--~~aL-~P~~~~D~~g~~--SGsav~~~dg~~~l~YTg 137 (511)
.++++| .|+++-|-.|.-. |+..+..|.-.+ -|+-. ++.| .|.-+|+..|.| .|.||+.++|++.+-|.+
T Consensus 137 tfeh~gk~yyvwaqkdp~i~--gnsniyiaemen--pwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkifi~ysa 212 (324)
T COG3940 137 TFEHNGKLYYVWAQKDPNIK--GNSNIYIAEMEN--PWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIFITYSA 212 (324)
T ss_pred eeeeCCEEEEEEeccCCCcc--CCcceEEEeccC--CceecCceEEecCCCcccEEEEEEecCCceEEEECCEEEEEEec
Confidence 345655 5788888887644 444454554333 46655 3434 344567777877 488888889999999987
Q ss_pred cCCCCcceEEEEEec---CCCCcccceeeecCCCceec
Q 010428 138 IDPHNRQVQNLAVPK---NLSDPYLREWVKSPKNPLMA 172 (511)
Q Consensus 138 ~~~~~~q~q~lA~s~---d~~d~~l~~w~K~~~nPVi~ 172 (511)
...+..-..++-+.. |.-|| .+|+|.+ .||+.
T Consensus 213 satd~nycmgllwanen~dlldp--aswtksp-tpvf~ 247 (324)
T COG3940 213 SATDVNYCMGLLWANENSDLLDP--ASWTKSP-TPVFK 247 (324)
T ss_pred cccccceeeeeeeecccCCcCCc--hhcccCC-Cccee
Confidence 643322223333332 22233 5899974 78884
No 84
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=76.99 E-value=54 Score=36.12 Aligned_cols=97 Identities=19% Similarity=0.175 Sum_probs=56.6
Q ss_pred CCCceEEEEeccCC---CCcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010428 127 PGEKPAIFYTGIDP---HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (511)
Q Consensus 127 ~dg~~~l~YTg~~~---~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~g 203 (511)
-+|+|+|||-=+.. .+...=+.|+|+| |++|+..+ +++.|. ..++.....--.+|-. .++.+.|+-|
T Consensus 50 ~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~D-----lv~W~~~p--iaL~Pd--~~~d~~g~ySGSAV~~-~~~l~lfytg 119 (486)
T COG1621 50 FDGKYHLFYQYNPFGAAHGPKHWGHAVSKD-----LVHWEHLP--IALAPD--DDYDSHGCYSGSAVVD-DGNLSLFYTG 119 (486)
T ss_pred ECCEEEEEEecCCCCCCCCCceeeeeccCC-----cccceECC--ceecCC--CccccCCceeeeEEEe-CCcEEEEEcc
Confidence 58899999986532 1334446799977 59999752 344443 2233333333333333 4677777777
Q ss_pred eecC---Ccc-EEEEEEcCCCCCcEE-cccccccC
Q 010428 204 SKIN---RKG-LAILYRSKDFVHWIK-AKHPLHSV 233 (511)
Q Consensus 204 a~~~---~~G-~i~ly~S~Dl~~W~~-~~~~l~~~ 233 (511)
...+ .+. .=.+..|+|..+++. .+.++...
T Consensus 120 ~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 120 NVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred ceeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 5441 122 225778888888877 35555443
No 85
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=71.81 E-value=64 Score=34.87 Aligned_cols=128 Identities=12% Similarity=0.146 Sum_probs=79.7
Q ss_pred CCEEEEEeeeCCCC-CCC-----CCcEEEEEEeCC----CCcceecCCCCCCCCCccC-------CCeEeeeEEEc-CCC
Q 010428 68 KGIYHLFYQYNPKG-AVW-----GNIVWAHSTSKD----LINWIPHDPAIYPSQQSDI-------NGCWSGSATIL-PGE 129 (511)
Q Consensus 68 ~G~YHLFYQ~~P~~-~~~-----g~~~WgHa~S~D----LvhW~~~~~aL~P~~~~D~-------~g~~SGsav~~-~dg 129 (511)
+|+..|||...-.+ ..- -...-|++.+.| +-.|+.+.+.+.||+.+-+ ...=.+.++.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999984331 111 124567777777 4568877777888864321 22335777776 589
Q ss_pred ceEEEEeccCCC--------C------------------------cceEEEEEecCCCCcccceeeecCCCceecCCCCC
Q 010428 130 KPAIFYTGIDPH--------N------------------------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMN 177 (511)
Q Consensus 130 ~~~l~YTg~~~~--------~------------------------~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~ 177 (511)
+-||++.|+... . ...++||...+.. +..|+-+ .|+|...
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~--- 294 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN--- 294 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET---
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc---
Confidence 999999986420 0 1246788887642 2568876 4899654
Q ss_pred cCCCCCCCCCEEEEeCCCCeEEEEEeeec
Q 010428 178 QINTSSFRDPTTAWLGPDKRWRVIIGSKI 206 (511)
Q Consensus 178 ~~~~~~fRDP~vvw~~~~g~w~m~~ga~~ 206 (511)
.+ .....=|.||.+ +|+||++..++.
T Consensus 295 ~v-~de~ERP~iv~~--~gkyYLFt~s~~ 320 (428)
T PF02435_consen 295 GV-NDELERPHIVFM--NGKYYLFTISHL 320 (428)
T ss_dssp TT-BS-EEEEEEEEE--TTEEEEEEEEEG
T ss_pred cc-cccccCCcEEEE--CCEEEEEEEecc
Confidence 11 233456777655 899999998875
No 86
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=63.74 E-value=1.5e+02 Score=29.06 Aligned_cols=160 Identities=18% Similarity=0.325 Sum_probs=90.6
Q ss_pred CCCCCccCCcceEEECCEEEEEeeeCCCCCC-CC----CcEEEEEEeCCCC--cceecCCCCCCCCCccCCCeEeeeEE-
Q 010428 53 PPKNWINDPNGVMIYKGIYHLFYQYNPKGAV-WG----NIVWAHSTSKDLI--NWIPHDPAIYPSQQSDINGCWSGSAT- 124 (511)
Q Consensus 53 p~~gw~NDPnG~~~~~G~YHLFYQ~~P~~~~-~g----~~~WgHa~S~DLv--hW~~~~~aL~P~~~~D~~g~~SGsav- 124 (511)
|-.+.+.-| -+-|.+|+|++||-..|.... -| +|.-=...+.|-+ +|.+.+....+ |+ .||=.|+
T Consensus 65 pms~liwap-eih~ingkwyiyfaaa~ta~~k~g~f~hrmfvlene~anpltg~w~ekgqikt~---we---sfsldatt 137 (324)
T COG3940 65 PMSNLIWAP-EIHFINGKWYIYFAAAPTANIKDGTFNHRMFVLENENANPLTGNWVEKGQIKTA---WE---SFSLDATT 137 (324)
T ss_pred chhhccccc-ceeEEcceEEEEEeecCcccccccccceeEEEEecCCCCCCcccceecceeccc---hh---cceeeeee
Confidence 444555667 356789999999998886432 12 2322223344444 68877654433 22 2333333
Q ss_pred EcCCCceEEEEeccCC--CCcceEEEEEecCCCCcccceeeecCCCceec-CCCCCcCCCCCC---CCCEEEEeCCCCeE
Q 010428 125 ILPGEKPAIFYTGIDP--HNRQVQNLAVPKNLSDPYLREWVKSPKNPLMA-PDAMNQINTSSF---RDPTTAWLGPDKRW 198 (511)
Q Consensus 125 ~~~dg~~~l~YTg~~~--~~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~-~p~~~~~~~~~f---RDP~vvw~~~~g~w 198 (511)
..++|+.+.++...+. .+...+.+|...+. |+-. +.||+- .|. -+++...| ..|.|+ + .+|+-
T Consensus 138 feh~gk~yyvwaqkdp~i~gnsniyiaemenp-------wtik-gepvmlskpe-~dwe~~gfwvnegpav~-k-~ngki 206 (324)
T COG3940 138 FEHNGKLYYVWAQKDPNIKGNSNIYIAEMENP-------WTIK-GEPVMLSKPE-LDWEIKGFWVNEGPAVL-K-KNGKI 206 (324)
T ss_pred eeeCCEEEEEEeccCCCccCCcceEEEeccCC-------ceec-CceEEecCCC-cccEEEEEEecCCceEE-E-ECCEE
Confidence 2467887777765443 35567788877653 7753 678883 331 23444444 578764 4 46777
Q ss_pred EEEEeeec-CC---ccEEEEEEcCCCC---CcEEccccc
Q 010428 199 RVIIGSKI-NR---KGLAILYRSKDFV---HWIKAKHPL 230 (511)
Q Consensus 199 ~m~~ga~~-~~---~G~i~ly~S~Dl~---~W~~~~~~l 230 (511)
.+.+++.. +. .|.+..-...||. +|+....|+
T Consensus 207 fi~ysasatd~nycmgllwanen~dlldpaswtksptpv 245 (324)
T COG3940 207 FITYSASATDVNYCMGLLWANENSDLLDPASWTKSPTPV 245 (324)
T ss_pred EEEEeccccccceeeeeeeecccCCcCCchhcccCCCcc
Confidence 66666543 32 3443333455554 788655444
No 87
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=60.14 E-value=42 Score=34.83 Aligned_cols=96 Identities=16% Similarity=0.243 Sum_probs=52.3
Q ss_pred cCCCceEEEEeccCC-CC------cceEEEEEecCCCCcccceeeecCCCceecC-CCCCcCCCCCCCCCEEEEeCCCCe
Q 010428 126 LPGEKPAIFYTGIDP-HN------RQVQNLAVPKNLSDPYLREWVKSPKNPLMAP-DAMNQINTSSFRDPTTAWLGPDKR 197 (511)
Q Consensus 126 ~~dg~~~l~YTg~~~-~~------~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~-p~~~~~~~~~fRDP~vvw~~~~g~ 197 (511)
.-+|+.||.|..+.. .. .....||.|+|.+ .+|++.+. .+-.+ +..++............+. .++.
T Consensus 102 ~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~~-~~~~~~~~~~g~~~~~~~fq~~a~~-~~dg 175 (316)
T PF13810_consen 102 SVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVPG-TIRPNSPFHPGFNQGNWNFQMAAFV-KDDG 175 (316)
T ss_pred EECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCCC-cccccccccCCcccccccccccccc-CCCC
Confidence 348899999988743 11 2357899999975 79998742 22221 1001111000111111122 2455
Q ss_pred EEEEEeeecCCccEEEEEEc-----CCCCCcEEcc
Q 010428 198 WRVIIGSKINRKGLAILYRS-----KDFVHWIKAK 227 (511)
Q Consensus 198 w~m~~ga~~~~~G~i~ly~S-----~Dl~~W~~~~ 227 (511)
|+-++|......|.+.|+|- .|+..|++-.
T Consensus 176 yVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~ 210 (316)
T PF13810_consen 176 YVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWD 210 (316)
T ss_pred EEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccC
Confidence 76677765444567888884 3555676653
No 88
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=37.76 E-value=1.1e+02 Score=33.83 Aligned_cols=91 Identities=23% Similarity=0.306 Sum_probs=52.3
Q ss_pred CCCceEEEEeccCCC---CcceEEEEEecCCCCcccceeeecCCCceecCCCCCcCCCCCCCCCEEEEeCCCCeEEEEEe
Q 010428 127 PGEKPAIFYTGIDPH---NRQVQNLAVPKNLSDPYLREWVKSPKNPLMAPDAMNQINTSSFRDPTTAWLGPDKRWRVIIG 203 (511)
Q Consensus 127 ~dg~~~l~YTg~~~~---~~q~q~lA~s~d~~d~~l~~w~K~~~nPVi~~p~~~~~~~~~fRDP~vvw~~~~g~w~m~~g 203 (511)
.+|.|+|||.=+... +...=+.|+|+| |++|+.++ |-|.|.+..++ ...|---.+ .. .+|.=.|+..
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~Ps~~~di-ng~wSGSat-i~-~~~~~vilyt 137 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAPSEWFDI-NGCWSGSAT-ID-PNNSPVILYT 137 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCCCCcccc-CccccceEE-Ec-cCCCeEEEec
Confidence 589999999865432 335567899988 59999864 55544311111 123333332 22 5666666665
Q ss_pred eecCCccEEEEEE-cCC-----CCCcEEcc
Q 010428 204 SKINRKGLAILYR-SKD-----FVHWIKAK 227 (511)
Q Consensus 204 a~~~~~G~i~ly~-S~D-----l~~W~~~~ 227 (511)
+-.....+|..|. -.| ++.|...+
T Consensus 138 g~d~~~rqVqn~a~p~d~sdp~l~~w~k~~ 167 (571)
T KOG0228|consen 138 GIDPNNRQVQNYAYPKDVSDPQLIAWSKDG 167 (571)
T ss_pred ccCcCceEEEEEeccCCCCchhhheeecCC
Confidence 5544445666665 223 45676543
No 89
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=23.91 E-value=7.6e+02 Score=24.92 Aligned_cols=70 Identities=29% Similarity=0.515 Sum_probs=39.9
Q ss_pred CCcceEEE--CCEEEEEeeeCCCCCCCCCcEEEEEEeCCCCc---ceecCCCCCCCCCcc-CCCeEeeeEEEcCCCceEE
Q 010428 60 DPNGVMIY--KGIYHLFYQYNPKGAVWGNIVWAHSTSKDLIN---WIPHDPAIYPSQQSD-INGCWSGSATILPGEKPAI 133 (511)
Q Consensus 60 DPnG~~~~--~G~YHLFYQ~~P~~~~~g~~~WgHa~S~DLvh---W~~~~~aL~P~~~~D-~~g~~SGsav~~~dg~~~l 133 (511)
-|. ++|+ +..|.|-||+.|. .....+|+|--+ |....+ |..+..-+ ..|...--+ |.++-..||
T Consensus 78 AP~-vFYFaPk~~W~L~yQwg~~-------~fsY~Ts~DptnpngWSapq~-lf~g~i~~~~~g~iD~~v-I~D~~n~yL 147 (271)
T PF03664_consen 78 APQ-VFYFAPKNIWYLAYQWGPA-------AFSYSTSSDPTNPNGWSAPQP-LFSGSISGSGTGPIDQWV-ICDDTNMYL 147 (271)
T ss_pred cce-EEEecCCcEEEEEEecCCC-------cceeecCCCCCCCccCCCCcc-cccccccCCCCCceeeEE-EecCCceEE
Confidence 464 5565 8899999997652 245678888753 765433 33322111 123333333 334556899
Q ss_pred EEeccC
Q 010428 134 FYTGID 139 (511)
Q Consensus 134 ~YTg~~ 139 (511)
|+.+-+
T Consensus 148 Ffa~Dn 153 (271)
T PF03664_consen 148 FFAGDN 153 (271)
T ss_pred EEcCCC
Confidence 998754
No 90
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=22.53 E-value=3.7e+02 Score=21.52 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=21.7
Q ss_pred ccceeEEeecCCCceeeEEEEEEEeCCCCcEEEEEe
Q 010428 444 GPFGLLALASKDLKEYTAVFFRIFKGEDNKFVVLMC 479 (511)
Q Consensus 444 g~~Gl~v~~s~~~~E~t~i~f~~~~~~~~~~~~~~~ 479 (511)
..++-.+...+--.....+.++++.+. +..++|++
T Consensus 50 ~~~~~~~~~~~~~~~~~~l~L~i~vD~-SsvEiFvN 84 (86)
T PF08244_consen 50 EEFGTFVRSAPLDLGDKILKLRIFVDR-SSVEIFVN 84 (86)
T ss_dssp CEEEEEEEEEETTTTESEEEEEEEEET-TEEEEEET
T ss_pred cccCcceEEeeccCCCCcEEEEEEEeC-CEEEEEEC
Confidence 345554444332233455778888887 88898876
Done!