BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010432
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/329 (35%), Positives = 184/329 (55%), Gaps = 43/329 (13%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
+L++F+ +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRL----------ADGTLVAVKRLKEE 73
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
QG + ++ EV + VH NL++L G+C+ +RLLVY +M GS+ + L R
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD----------------- 176
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
+++ A + DFGLAK D HV V GT G+ APEY+ TG + ++DV+
Sbjct: 177 --------EEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVF 227
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHN--LVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
+GV+LLE++TG+R+ D R + + L++W + L E ++ L+D L+G++ +
Sbjct: 228 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEV 286
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALK 437
++ Q+A C P RP MSEVV L+
Sbjct: 287 EQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 183/329 (55%), Gaps = 43/329 (13%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
+L++F+ +L++A+ NF +++LG GGFG V+KG + G VAVK L +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAVKRLKEE 65
Query: 175 GLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR---S 230
QG + ++ EV + VH NL++L G+C+ +RLLVY +M GS+ + L R
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
PL W R +IALG+A+GLA+LH+ + +I+RD K +NILLD
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD----------------- 168
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
+++ A + DFGLAK D HV V G G+ APEY+ TG + ++DV+
Sbjct: 169 --------EEFEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVF 219
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHN--LVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
+GV+LLE++TG+R+ D R + + L++W + L E ++ L+D L+G++ +
Sbjct: 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEV 278
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVEALK 437
++ Q+A C P RP MSEVV L+
Sbjct: 279 EQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 42/318 (13%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
E+ L H +LV LIG+C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+I +GAA+GL +LH R +I+RD K+ NILLD +
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLD-------------------------E 174
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
++ K++DFG++K G E D+TH+ V GT GY PEY + G LT +SDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
L R ++ ++ P NL EWA + +++DP L + +K A CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 420 SRDPKARPLMSEVVEALK 437
+ + RP M +V+ L+
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 169/318 (53%), Gaps = 42/318 (13%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
DL+ AT NF + L+G G FG V+KG + + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD----------GAKVALKRRTPESSQGIEEF 82
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 239
E+ L H +LV LIG+C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+I +GAA+GL +LH R +I+RD K+ NILLD +
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLD-------------------------E 174
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
++ K++DFG++K G E +TH+ V GT GY PEY + G LT +SDVYSFGVVL E+
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
L R ++ ++ P NL EWA + +++DP L + +K A CL
Sbjct: 235 LCARSAIVQSLPREMVNLAEWAVES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 420 SRDPKARPLMSEVVEALK 437
+ + RP M +V+ L+
Sbjct: 294 ALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 170/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 167
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
+ + AK+SDFGLA+ + +T + +R++GT Y APE + G +T
Sbjct: 168 -------------EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITP 213
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
+SD+YSFGVVLLE++TG ++D++R L++ E + ID ++ S
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 270
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
+ +A+ CL RP + +V + L+ +
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 169/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 69
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 70 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 122
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD
Sbjct: 123 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 167
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
+ + AK+SDFGLA+ + +T + R++GT Y APE + G +T
Sbjct: 168 -------------EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITP 213
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
+SD+YSFGVVLLE++TG ++D++R L++ E + ID ++ S
Sbjct: 214 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 270
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
+ +A+ CL RP + +V + L+ +
Sbjct: 271 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 168/334 (50%), Gaps = 47/334 (14%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ +GEGGFG V+KG++ A K + +
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 63
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ + H NLV+L+G+ + D LVY +MP GSL + L
Sbjct: 64 TEELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS 116
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
+ PL W +R KIA GAA G+ FLHE I+RD K++NILLD
Sbjct: 117 CLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 161
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
+ + AK+SDFGLA+ + + + R++GT Y APE + G +T
Sbjct: 162 -------------EAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITP 207
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI 405
+SD+YSFGVVLLE++TG ++D++R L++ E + ID ++ S
Sbjct: 208 KSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS- 264
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
+ +A+ CL RP + +V + L+ +
Sbjct: 265 TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 139/265 (52%), Gaps = 44/265 (16%)
Query: 114 SRLRKFTFNDLKLATRNF--RPESL----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+R F+F +LK T NF RP S+ GEGGFG V+KG++ A K + +
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 168 VKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL- 226
+ L +++ E+ H NLV+L+G+ + D LVY + P GSL + L
Sbjct: 61 TEELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLS 113
Query: 227 -FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
+ PL W R KIA GAA G+ FLHE I+RD K++NILLD
Sbjct: 114 CLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLD------------ 158
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
+ + AK+SDFGLA+ + + +R++GT Y APE + G +T
Sbjct: 159 -------------EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITP 204
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNR 370
+SD+YSFGVVLLE++TG ++D++R
Sbjct: 205 KSDIYSFGVVLLEIITGLPAVDEHR 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 40/234 (17%)
Query: 134 ESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL----AEVNF 188
E ++G GGFG V++ WI G VAVK HD + + + E
Sbjct: 12 EEIIGIGGFGKVYRAFWI------------GDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L H N++ L G C+++ LV EF G L L + +P I + A+ A+G
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARG 117
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
+ +LH+EA P+I+RD K+SNIL+ + EN G N +L K++DF
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILI-LQKVEN----------GDLSNKIL------KITDF 160
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GLA++ K + G Y + APE + + SDV+S+GV+L E+LTG
Sbjct: 161 GLAREWHRTTKMSAA----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+++ L A G+ ++ + P+++RD ++ NI L ++ EN C
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
AK++DFGL++ H + ++G + + APE + T ++D YSF ++L
Sbjct: 168 ----AKVADFGLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
+LTG D+ G+ + R G R PRL +
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
C S DPK RP S +V+ L L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+++ L A G+ ++ + P+++RD ++ NI L ++ EN C
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
AK++DFG ++ H + ++G + + APE + T ++D YSF ++L
Sbjct: 168 ----AKVADFGTSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
+LTG D+ G+ + R G R PRL +
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
C S DPK RP S +V+ L L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 60/323 (18%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL-------NHDGLQG 178
LA E +G+GGFG V KG + ++ + VA+K+L + ++
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKS---------VVAIKSLILGDSEGETEMIEK 66
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 238
+E+ EV + +L H N+VKL Y + + +V EF+P G L + L ++ P+ WS++
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+++ L A G+ ++ + P+++RD ++ NI L ++ EN C
Sbjct: 125 LRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLD-ENA---PVC------------ 167
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH--LTSRSDVYSFGVVL 356
AK++DF L++ H + ++G + + APE + T ++D YSF ++L
Sbjct: 168 ----AKVADFSLSQQS-----VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
+LTG D+ G+ + R G R PRL +
Sbjct: 219 YTILTGEGPFDEYS-YGKIKFINMIREE-GLRPTIPEDCPPRLRNVIEL----------- 265
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
C S DPK RP S +V+ L L
Sbjct: 266 -CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 65/315 (20%)
Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
+ E ++G G FG V K W ++ VA+K + + + K ++ E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 54
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALG 244
L + H N+VKL G C+ + LV E+ GSL N + + PLP+ + M L
Sbjct: 55 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
++G+A+LH + +I+RD K N+LL A G + K
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVA---------GGTVL---------------K 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG A D +TH+ T G+ + APE + + + DV+S+G++L E++T R+
Sbjct: 148 ICDFGTACD----IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
D+ G + WA H G R + + +E L C S+DP
Sbjct: 203 PFDEI--GGPAFRIMWAV-HNGTRPPLIKNLPKPIES------------LMTRCWSKDPS 247
Query: 425 ARPLMSEVVEALKPL 439
RP M E+V+ + L
Sbjct: 248 QRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 65/315 (20%)
Query: 129 RNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVN 187
+ E ++G G FG V K W ++ VA+K + + + K ++ E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 53
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALG 244
L + H N+VKL G C+ + LV E+ GSL N + + PLP+ + M L
Sbjct: 54 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
++G+A+LH + +I+RD K N+LL A G + K
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVA---------GGTVL---------------K 146
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG A D +TH+ T G+ + APE + + + DV+S+G++L E++T R+
Sbjct: 147 ICDFGTACD----IQTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
D+ G + WA H G R + + +E L C S+DP
Sbjct: 202 PFDEI--GGPAFRIMWAV-HNGTRPPLIKNLPKPIES------------LMTRCWSKDPS 246
Query: 425 ARPLMSEVVEALKPL 439
RP M E+V+ + L
Sbjct: 247 QRPSMEEIVKIMTHL 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ VI+RD N L+ ++ K+SDFG+ +
Sbjct: 123 S---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 154
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 155 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 212
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 213 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 436 LKPL 439
L +
Sbjct: 258 LAAI 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
VI+RD N L+ ++ K+SDFG+ +
Sbjct: 123 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 154
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 155 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 212
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 213 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 257
Query: 436 LKPL 439
L +
Sbjct: 258 LAEI 261
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
VI+RD N L+ ++ K+SDFG+ +
Sbjct: 121 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 152
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 153 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 210
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 211 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255
Query: 436 LKPL 439
L +
Sbjct: 256 LAEI 259
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
VI+RD N L+ ++ K+SDFG+ +
Sbjct: 126 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 157
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 158 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 215
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 216 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260
Query: 436 LKPL 439
L +
Sbjct: 261 LAEI 264
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G +++ E + L H
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV+EFM G L ++L + + + L +G+A+L E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
VI+RD N L+ ++ K+SDFG+ +
Sbjct: 143 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 174
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 175 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 232
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 233 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWKERPEDRPAFSRLLRQ 277
Query: 436 LKPL 439
L +
Sbjct: 278 LAEI 281
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 58/304 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V G W+ ++ VA+KT+ +G ++++ E + L H
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L G C+E LV EFM G L ++L + + + L +G+A+L E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
VI+RD N L+ ++ K+SDFG+ +
Sbjct: 124 C---VIHRDLAARNCLVG-------------------------ENQVIKVSDFGMTRFVL 155
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
+ D+ ST +A+PE +S+SDV+SFGV++ E+ + + +NR N E
Sbjct: 156 D-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE- 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEA 435
+VE + +RL PRL + Q+ HC P+ RP S ++
Sbjct: 214 -VVE-------DISTGFRLYKPRL-------ASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258
Query: 436 LKPL 439
L +
Sbjct: 259 LAEI 262
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 104/230 (45%), Gaps = 41/230 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D H+ W E++ L L H
Sbjct: 39 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 196 NLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
+++K G C ED LV E++P GSL ++L R S+ L + + A +G+A+L
Sbjct: 94 HIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYL 150
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H + I+RD N+LLD D K+ DFGLAK
Sbjct: 151 HAQH---YIHRDLAARNVLLD-------------------------NDRLVKIGDFGLAK 182
Query: 313 DGPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
PEG + + V + APE + SDV+SFGV L E+LT
Sbjct: 183 AVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
+++K G C + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+R+ N+LLD D K+ DFGLAK
Sbjct: 135 SQH---YIHRNLAARNVLLD-------------------------NDRLVKIGDFGLAKA 166
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
PEG + + V + APE + SDV+SFGV L E+LT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 96 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
A + ++RD N +LD + + K++DFGLA+D
Sbjct: 209 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 241
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 146
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 147 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 178
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 179 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 42 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 153
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 154 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 185
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 186 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 105/229 (45%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
+++K G C + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+R+ N+LLD D K+ DFGLAK
Sbjct: 135 AQH---YIHRNLAARNVLLD-------------------------NDRLVKIGDFGLAKA 166
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
PEG + + V + APE + SDV+SFGV L E+LT
Sbjct: 167 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 150 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 181
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 182 RDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 38 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ F
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKF 149
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 150 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 181
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E D H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 182 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 103/241 (42%), Gaps = 49/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E +P K + VAVK L L K++ E L +L H +
Sbjct: 23 LGEGAFGKVFLA--ECYNLSPTK--DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP----------------LPWSIRMK 240
+VK G C + D ++V+E+M G L N R P L S +
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
IA A G+ +L A + ++RD T N L+ A N+L
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGA--------------------NLL--- 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFG+++D D V M + PE +M T+ SDV+SFGV+L E+
Sbjct: 172 --VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 361 T 361
T
Sbjct: 230 T 230
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 101/238 (42%), Gaps = 46/238 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E P + + VAVKTL K++ E L +L H +
Sbjct: 21 LGEGAFGKVFLA--ECYNLCPEQ--DKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------------LPWSIRMKIAL 243
+VK G C+E D ++V+E+M G L N R P L S + IA
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
A G+ +L A + ++RD T N L+ N+L
Sbjct: 136 QIAAGMVYL---ASQHFVHRDLATRNCLVG--------------------ENLL-----V 167
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFG+++D D V M + PE +M T+ SDV+S GVVL E+ T
Sbjct: 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 135/322 (41%), Gaps = 59/322 (18%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 180
+D+ + + + +G G FG V + E +G+ VAVK L +
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 181 -EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSI 237
E+L EV + L H N+V +G + +V E++ RGSL L + L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
R+ +A AKG+ +LH P+++RD K+ N+L+D
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVD------------------------ 173
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
+ Y K+ DFGL++ + S GT + APE + +SDVYSFGV+L
Sbjct: 174 -KKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAH 417
E+ T ++ P V A +R R ++P++ A +
Sbjct: 231 ELATLQQPWGNLNPAQ----VVAAVGFKCKRLEIPRNLNPQV------------AAIIEG 274
Query: 418 CLSRDPKARPLMSEVVEALKPL 439
C + +P RP + +++ L+PL
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPL 296
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ EF+P GSL +L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
A + ++RD N +LD + + K++DFGLA+D
Sbjct: 149 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 181
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 182 MYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
+ N + R+ + LG+G FG V E P++ TG VAVK L H +
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
+++ E+ L L H N+VK G C +R L+ E++P GSL ++L + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
++ KG+ +L + I+RD T NIL V EN K G
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNIL---VENENRVKIG------------- 174
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVV 355
DFGL K P+ DK + G + APE + + SDV+SFGVV
Sbjct: 175 ---------DFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 356 LLEMLT 361
L E+ T
Sbjct: 225 LYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 130 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 163
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 164 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 107/246 (43%), Gaps = 38/246 (15%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
+ N + R+ + LG+G FG V E P++ TG VAVK L H +
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSI 237
+++ E+ L L H N+VK G C +R L+ E++P GSL ++L + +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 133
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
++ KG+ +L + I+RD T NIL V EN K G
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNIL---VENENRVKIG------------- 174
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVV 355
DFGL K P+ DK + G + APE + + SDV+SFGVV
Sbjct: 175 ---------DFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVV 224
Query: 356 LLEMLT 361
L E+ T
Sbjct: 225 LYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 138 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 171
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 172 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 136 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 169
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 170 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 129 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 162
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 163 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 137 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 170
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 171 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 135 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 168
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 169 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 162 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 195
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 196 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LGEG FG V E P TG VAVK+L + H + E+ L +L H
Sbjct: 29 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
R ++RD N+L+++ ++ K+ DFGL K
Sbjct: 143 --GSRQYVHRDLAARNVLVES-------------------------EHQVKIGDFGLTK- 174
Query: 314 GPEGDK---THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E DK T R + YA PE +M SDV+SFGV L E+LT
Sbjct: 175 AIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 131 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 164
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 165 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 104/231 (45%), Gaps = 41/231 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LGEG FG V E P TG VAVK+L + H + E+ L +L H
Sbjct: 17 LGEGHFGKV-----ELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 196 NLVKLIGYCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
R ++RD N+L+++ ++ K+ DFGL K
Sbjct: 131 --GSRQYVHRDLAARNVLVES-------------------------EHQVKIGDFGLTK- 162
Query: 314 GPEGDK---THVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E DK T R + YA PE +M SDV+SFGV L E+LT
Sbjct: 163 AIETDKEXXTVKDDRDSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+R+ T NIL V EN K G DFGL K
Sbjct: 132 -GTKRYIHRNLATRNIL---VENENRVKIG----------------------DFGLTKVL 165
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + + G + APE + + SDV+SFGVVL E+ T
Sbjct: 166 PQ-DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 61/323 (18%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK- 180
+D+ + + + +G G FG V + E +G+ VAVK L +
Sbjct: 30 DDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGS---------DVAVKILMEQDFHAERV 78
Query: 181 -EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSI 237
E+L EV + L H N+V +G + +V E++ RGSL L + L
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
R+ +A AKG+ +LH P+++R+ K+ N+L+D
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVD------------------------ 173
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
+ Y K+ DFGL++ T +S++ GT + APE + +SDVYSFGV+L
Sbjct: 174 -KKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
E+ T ++ P V A +R R ++P++ A +
Sbjct: 230 WELATLQQPWGNLNPAQ----VVAAVGFKCKRLEIPRNLNPQV------------AAIIE 273
Query: 417 HCLSRDPKARPLMSEVVEALKPL 439
C + +P RP + +++ L+PL
Sbjct: 274 GCWTNEPWKRPSFATIMDLLRPL 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V E P++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 197 LVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ I+RD T NIL V EN K G DFGL K
Sbjct: 134 -GTKRYIHRDLATRNIL---VENENRVKIG----------------------DFGLTKVL 167
Query: 315 PEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
P+ DK + G + APE + + SDV+SFGVVL E+ T
Sbjct: 168 PQ-DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 36 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 147
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 148 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 179
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 180 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 29 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
A + ++RD N +LD + + K++DFGLA+D
Sbjct: 142 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 174
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 175 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 32 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 143
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 144 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 175
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 148
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 149 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 180
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 181 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 37 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
A + ++RD N +LD + + K++DFGLA+D
Sbjct: 150 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 182
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 183 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 35 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 146
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 147 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 178
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 179 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 56 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 167
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 168 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 199
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 200 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 55 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
A + ++RD N +LD + + K++DFGLA+D
Sbjct: 168 --ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLARD 200
Query: 314 --GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 201 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVH 194
++G G FGCV+ G + +N G + AVK+LN G ++L E + D H
Sbjct: 34 VIGRGHFGCVYHGTLLDND------GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 195 LNLVKLIGYCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAKGLAF 251
N++ L+G C+ + L+V +M G L N F R+ +++ I G AKG+ +
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKY 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
L A + ++RD N +LD + + K++DFGLA
Sbjct: 146 L---ASKKFVHRDLAARNCMLD-------------------------EKFTVKVADFGLA 177
Query: 312 KD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+D E H T + A E + T T++SDV+SFGV+L E++T
Sbjct: 178 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L G Q W E+ L L H
Sbjct: 17 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++VK G C + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+R N+LLD D K+ DFGLAK
Sbjct: 130 AQH---YIHRALAARNVLLD-------------------------NDRLVKIGDFGLAKA 161
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
PEG + + V + APE + SDV+SFGV L E+LT
Sbjct: 162 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG FG V + P GTG VAVK L G Q W E+ L L H
Sbjct: 16 LGEGHFGKVSLYCYD-----PTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 196 NLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++VK G C + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+R N+LLD D K+ DFGLAK
Sbjct: 129 AQH---YIHRALAARNVLLD-------------------------NDRLVKIGDFGLAKA 160
Query: 314 GPEGDKTH-VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
PEG + + V + APE + SDV+SFGV L E+LT
Sbjct: 161 VPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 105/228 (46%), Gaps = 19/228 (8%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P + + + + E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------GMEXSYDINRVPE 151
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD 313
E + ++D + L R Y CI+ L N+L + N K++DFGLA+D
Sbjct: 152 EQ---MTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 207 INNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 191
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 192 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 249
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 250 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 137
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 138 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 195
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 196 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 133 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL 190
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 191 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 18 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 132 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 163
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 164 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 220
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 221 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLLELMRMCWQ 263
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 264 YNPKMRPSFLEIISSIK 280
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 135 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 192
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 193 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 136 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 167
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 168 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 224
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 225 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 269
Query: 423 PKARPLMSEVVEALK 437
PK RP E+V LK
Sbjct: 270 PKMRPTFLEIVNLLK 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 172
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 229
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 230 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 273 YNPKMRPSFLEIISSIK 289
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ E+ +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N +++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
PK RP E+V LK
Sbjct: 273 PKMRPTFLEIVNLLK 287
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 93
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 94 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA +
Sbjct: 153 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATEKSR 184
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 243
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 292
Query: 434 EALKPL 439
+++ L
Sbjct: 293 ASIELL 298
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 69/349 (19%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
FTF D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREI------FVAIK 67
Query: 170 TLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
TL + + ++L+E + +G H N++ L G + +++ EFM GSL++ L +
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ + G A G+ +L A+ ++RD NIL+++
Sbjct: 128 NDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNS-------------- 170
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTS 345
N++ K+SDFGL++ + T +G + APE + TS
Sbjct: 171 ------NLV-----CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS 219
Query: 346 RSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFS 404
SDV+S+G+V+ E+++ G R N +E + YRL P
Sbjct: 220 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------QDYRLPPP------- 262
Query: 405 IKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL---PN-LKDMASSS 449
+ QL C +D RP ++V L + PN LK MA S
Sbjct: 263 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLS 311
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA +
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATEKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
+++ L
Sbjct: 265 ASIELL 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 130/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 36 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 85
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 86 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 144
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA +
Sbjct: 145 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATEKSR 176
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 177 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 235
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 236 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 284
Query: 434 EALKPL 439
+++ L
Sbjct: 285 ASIELL 290
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 70/335 (20%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQ 177
F ++ ++A LG+G FG V++G G +P T VA+KT+N ++
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMR 61
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------ 231
E+L E + + + ++V+L+G + L++ E M RG L+++L RSL
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMEN 119
Query: 232 -----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
P S +++A A G+A+L+ ++RD N
Sbjct: 120 NPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNC---------------- 160
Query: 287 IYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR 346
M+ +D+ K+ DFG+ +D E D + + + +PE + G T+
Sbjct: 161 ---------MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY 211
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSI 405
SDV+SFGVVL E+ T L E +P+ G + R + +EG
Sbjct: 212 SDVWSFGVVLWEIAT---------------LAE--QPYQGLSNEQVLRFV---MEGGLLD 251
Query: 406 K---GAQKAAQLAAHCLSRDPKARPLMSEVVEALK 437
K +L C +PK RP E++ ++K
Sbjct: 252 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
+LG G FG V+KG W+ E T + VA+K LN G + + E++ E + +
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +LV+L+G C+ +L V + MP G L ++ + + + + AKG+ +L
Sbjct: 76 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 134
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
E R +++RD N+L V++ N+ K++DFGLA+
Sbjct: 135 E---RRLVHRDLAARNVL---VKSPNH----------------------VKITDFGLARL 166
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+K + + + A E + T +SDV+S+GV + E++T
Sbjct: 167 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 37/228 (16%)
Query: 136 LLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLV 193
+LG G FG V+KG W+ E T + VA+K LN G + + E++ E + +
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +LV+L+G C+ +L V + MP G L ++ + + + + AKG+ +L
Sbjct: 99 HPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE 157
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
E R +++RD N+L V++ N+ K++DFGLA+
Sbjct: 158 E---RRLVHRDLAARNVL---VKSPNH----------------------VKITDFGLARL 189
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+K + + + A E + T +SDV+S+GV + E++T
Sbjct: 190 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ + +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 81 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ +I+RD K++NI L +D K+ DFGLA +
Sbjct: 140 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATEKS 171
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
+H ++ G+ + APE + + + +SDVY+FG+VL E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 165
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 222
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 223 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 265
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 266 YNPKMRPSFLEIISSIK 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 178
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 235
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 236 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 279 YNPKMRPSFLEIISSIK 295
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 46/238 (19%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK--EWLAEVNFLGDLV 193
+LGEG FG V +G +++ + GT L VAVKT+ D + E+L+E + D
Sbjct: 41 ILGEGEFGSVMEGNLKQ------EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 194 HLNLVKLIGYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIAL 243
H N+++L+G CIE + +++ FM G L +L L +P +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
A G+ +L + R ++RD N ML D
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNC-------------------------MLRDDMTV 186
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
++DFGL+K GD + A E + TS+SDV++FGV + E+ T
Sbjct: 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 138/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 55 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N C M+ +D+ K
Sbjct: 169 IADGMAYLNANK---FVHRDLAARN----------------C---------MVAEDFTVK 200
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 257
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 258 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 300
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 301 YNPKMRPSFLEIISSIK 317
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 33 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 147 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 178
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 235
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 236 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 278
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 279 YNPKMRPSFLEIISSIK 295
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G + G +P T VA+KT+N ++ E+L E + + +
Sbjct: 26 LGQGSFGMVYEGVAK--GVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 229 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 272 YNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 141 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 172
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 229
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 230 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 272
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 273 YNPKMRPSFLEIISSIK 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 138 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 169
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 226
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 227 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 271
Query: 423 PKARPLMSEVVEALK 437
PK RP E+V LK
Sbjct: 272 PKMRPTFLEIVNLLK 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 137 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 168
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 225
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 226 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 268
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 269 YNPKMRPSFLEIISSIK 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N M+ +D+ K
Sbjct: 140 IADGMAYLNANK---FVHRDLAARNC-------------------------MVAEDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 229 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLFELMRMCWQ 271
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 272 YNPKMRPSFLEIISSIK 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 32 IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 81 NILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ +I+RD K++NI L +D K+ DFGLA +
Sbjct: 140 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATEKS 171
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
+H ++ G+ + APE + + + +SDVY+FG+VL E++TG+
Sbjct: 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 128/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
PK RP E+V LK
Sbjct: 273 PKMRPTFLEIVNLLK 287
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 130 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 220
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 269
Query: 434 EALKPL 439
+++ L
Sbjct: 270 ASIELL 275
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 25/231 (10%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP +TVAVK L D + + ++E+ + + H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF--- 251
N++ L+G C +D ++ + +G+L +L R P G+ +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP---------------GMEYSYD 145
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGL 310
++ E + ++D + L R Y CI+ L N+L + N K++DFGL
Sbjct: 146 INRVPEEQMTFKDLVSCTYQL--ARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
A+D D +T + APE + T +SDV+SFGV++ E+ T
Sbjct: 204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 21 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 71 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 129
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 130 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 220
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 221 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 269
Query: 434 EALKPL 439
+++ L
Sbjct: 270 ASIELL 275
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 18 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 68 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 126
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 127 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 158
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 159 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 217
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 218 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 266
Query: 434 EALKPL 439
+++ L
Sbjct: 267 ASIELL 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 93
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 94 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 152
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 153 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATVKSR 184
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 243
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 244 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 292
Query: 434 EALKPL 439
+++ L
Sbjct: 293 ASIELL 298
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 43 IGSGSFGTVYKG--KWHGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 92
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 93 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 151
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 152 ---IIHRDLKSNNIFL-------------------------HEDLTVKIGDFGLATVKSR 183
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 242
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 243 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 291
Query: 434 EALKPL 439
+++ L
Sbjct: 292 ASIELL 297
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY + Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
+++ L
Sbjct: 265 ASIELL 270
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 110/259 (42%), Gaps = 57/259 (22%)
Query: 129 RNFRPESL-----LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
R FRP L LG+G FG K E TG + +K L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFGQAIKVTHRE---------TGEVMVMKELIRFDEETQRTFL 55
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
EV + L H N++K IG +D + + E++ G+L + PWS R+ A
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
A G+A+LH +I+RD + N L+ ++ N
Sbjct: 116 DIASGMAYLHSMN---IIHRDLNSHNCLVR-------------------------ENKNV 147
Query: 304 KLSDFGLA------KDGPEG-------DKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
++DFGLA K PEG D+ T V+G + APE + + DV+
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVF 206
Query: 351 SFGVVLLEMLTGRRSMDKN 369
SFG+VL E++ GR + D +
Sbjct: 207 SFGIVLCEII-GRVNADPD 224
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G G FG V+KG W +G VK L V T LQ K EV L H+
Sbjct: 20 IGSGSFGTVYKGKW---HGDVAVKM---LNVTAPTPQQ--LQAFKN---EVGVLRKTRHV 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N++ +GY + Q +V ++ SL +HL + IA A+G+ +LH +
Sbjct: 69 NILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ +I+RD K++NI L +D K+ DFGLA
Sbjct: 128 S---IIHRDLKSNNIFL-------------------------HEDNTVKIGDFGLATVKS 159
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVVLLEMLTGR 363
+H ++ G+ + APE + + + +SDVY+FG+VL E++TG+
Sbjct: 160 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V+KG + +G VK L V T LQ K EV L H+N
Sbjct: 16 IGSGSFGTVYKG--KWHGDVAVK---MLNVTAPTPQQ--LQAFKN---EVGVLRKTRHVN 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
++ +GY Q +V ++ SL +HL + IA A+G+ +LH ++
Sbjct: 66 ILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+RD K++NI L +D K+ DFGLA
Sbjct: 125 ---IIHRDLKSNNIFLH-------------------------EDLTVKIGDFGLATVKSR 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
+H ++ G+ + APE + + +SDVY+FG+VL E++TG+ N N
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNR 215
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + R +L R P+ +L A CL + RPL +++
Sbjct: 216 DQIIFMVGRGYLSPDLSKVRSNCPK-----------AMKRLMAECLKKKRDERPLFPQIL 264
Query: 434 EALKPL 439
+++ L
Sbjct: 265 ASIELL 270
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+A A G+ +L A ++RD T N L+ Q
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFG+++D D V R M + PE ++ T+ SDV+SFGVVL E+
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 361 T 361
T
Sbjct: 232 T 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+A A G+ +L A ++RD T N L+ Q
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 165
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFG+++D D V R M + PE ++ T+ SDV+SFGVVL E+
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 361 T 361
T
Sbjct: 226 T 226
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 10 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 64
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 65 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 124
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
KG+ +L R ++RD NIL+++ + + K++
Sbjct: 125 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 156
Query: 307 DFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 157 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 97/241 (40%), Gaps = 50/241 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG FG VF E + P + + VAVK L +++ E L L H +
Sbjct: 49 LGEGAFGKVFLA--ECHNLLPEQ--DKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 240
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+A A G+ +L A ++RD T N L+ Q
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVG-------------------------QG 194
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFG+++D D V R M + PE ++ T+ SDV+SFGVVL E+
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 361 T 361
T
Sbjct: 255 T 255
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 11 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 65
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 66 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 125
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
KG+ +L R ++RD NIL+++ + + K++
Sbjct: 126 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 157
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYG--YAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 158 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 103/237 (43%), Gaps = 38/237 (16%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 23 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 77
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y LV E++P G L + L R L S + +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
KG+ +L R ++RD NIL+++ + + K++
Sbjct: 138 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 169
Query: 307 DFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
DFGLAK P DK + R G + APE + + +SDV+SFGVVL E+ T
Sbjct: 170 DFGLAKLLPL-DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 135/317 (42%), Gaps = 70/317 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G G +P T VA+KT+N ++ E+L E + + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPET--RVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L++ E M RG L+++L RSL P S +++A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ ++RD N + +D+ K
Sbjct: 134 IADGMAYLNANK---FVHRDLAARNCXVA-------------------------EDFTVK 165
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + +PE + G T+ SDV+SFGVVL E+ T
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--- 222
Query: 365 SMDKNRPNGEHNLVEWARPHLG-ERRRFYRLIDPRLEGHFSIK---GAQKAAQLAAHCLS 420
L E +P+ G + R + +EG K +L C
Sbjct: 223 ------------LAE--QPYQGLSNEQVLRFV---MEGGLLDKPDNCPDMLLELMRMCWQ 265
Query: 421 RDPKARPLMSEVVEALK 437
+PK RP E++ ++K
Sbjct: 266 YNPKMRPSFLEIISSIK 282
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 56/311 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
AE ++RD NIL+++ N++ K+SDFGL++
Sbjct: 135 ---AEMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 166
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
E T +G + APE + TS SD +S+G+V+ E+++ G R
Sbjct: 167 FLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 226
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
N +E + YRL P QL C +D ARP
Sbjct: 227 MSNQDVINAIE----------QDYRLPPPP-------DCPTSLHQLMLDCWQKDRNARPR 269
Query: 429 MSEVVEALKPL 439
+VV AL +
Sbjct: 270 FPQVVSALDKM 280
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + AKG+AFL A + I+RD NILL R
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 206
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
K+ DFGLA+D V + APE + T SDV+S+G+
Sbjct: 207 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
L E+ + S P + +FY++I EG + A++
Sbjct: 260 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 301
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
C DP RP ++V+ ++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYCYN 123
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 184 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
GD + APE + + +SDV++FGV+L E+ T G P+
Sbjct: 161 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ L+E + YR+ P EG +K +L C +P RP +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
A + +
Sbjct: 263 AFETM 267
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + AKG+AFL A + I+RD NILL R
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 201
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
K+ DFGLA+D V + APE + T SDV+S+G+
Sbjct: 202 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 254
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
L E+ + S P + +FY++I EG + A++
Sbjct: 255 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 296
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
C DP RP ++V+ ++
Sbjct: 297 DIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL F
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEFSFN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 64/295 (21%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG G FG V+ G W NG VA+KTL G + +L E + L H
Sbjct: 17 LGNGQFGEVWMGTW---NGNT--------KVAIKTLK-PGTMSPESFLEEAQIMKKLKHD 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAAKGLAFL 252
LV+L + ++ +V E+M +GSL + L R+L LP + M A A G+A++
Sbjct: 65 KLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM--AAQVAAGMAYI 121
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
I+RD +++NIL+ G C K++DFGLA+
Sbjct: 122 ER---MNYIHRDLRSANILV--------GNGLIC-----------------KIADFGLAR 153
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
+ + T + APE + G T +SDV+SFG++L E++T R N
Sbjct: 154 LIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 212
Query: 373 GEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
R L + R YR+ P+ + S+ +L HC +DP+ RP
Sbjct: 213 ---------REVLEQVERGYRMPCPQ-DCPISLH------ELMIHCWKKDPEERP 251
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 121/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + AKG+AFL A + I+RD NILL R
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 183
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
K+ DFGLA+D V + APE + T SDV+S+G+
Sbjct: 184 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 236
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
L E+ + S P + +FY++I EG + A++
Sbjct: 237 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 278
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
C DP RP ++V+ ++
Sbjct: 279 DIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 123/325 (37%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + AKG+AFL A + I+RD NILL +G+
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL------THGRI------------ 199
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
K+ DFGLA+D V + APE + T SDV+S+G+
Sbjct: 200 -------TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 252
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
L E+ + S P + +FY++I EG + A++
Sbjct: 253 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 294
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
C DP RP ++V+ ++
Sbjct: 295 DIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 102/236 (43%), Gaps = 36/236 (15%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R+ + S LG+G FG V E P+ TG VAVK L H G +++ E+
Sbjct: 7 RHLKYISQLGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQI 61
Query: 189 LGDLVHLNLVKL--IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L L +VK + Y + LV E++P G L + L R L S + +
Sbjct: 62 LKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 121
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
KG+ +L R ++RD NIL+++ + + K++
Sbjct: 122 KGMEYL---GSRRCVHRDLAARNILVES-------------------------EAHVKIA 153
Query: 307 DFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
DFGLAK P + D V + APE + + +SDV+SFGVVL E+ T
Sbjct: 154 DFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + L H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 305 PNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 123/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + L H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 183 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 291 PNFAIILERIE 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 56/311 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V +G ++ AP K + VA+KTL + + E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRLK----APGKKES--CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G +++ EFM G+L++ L + + G A G+ +L
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
AE ++RD NIL+++ N++ K+SDFGL++
Sbjct: 133 ---AEMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 164
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
E T +G + APE + TS SD +S+G+V+ E+++ G R
Sbjct: 165 FLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
N +E + YRL P QL C +D ARP
Sbjct: 225 MSNQDVINAIE----------QDYRLPPPP-------DCPTSLHQLMLDCWQKDRNARPR 267
Query: 429 MSEVVEALKPL 439
+VV AL +
Sbjct: 268 FPQVVSALDKM 278
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 29 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 78 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 136 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 169 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 228 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 134 --RNYIHRDLRAANILVSDT-------------------------LSCKIADFGLARLIE 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 167 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 226 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 261
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYCYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 39/232 (16%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
+ ++G G FG V+KG ++ + P VA+KTL + + ++L E +G
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVP-----VAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+++L G + +++ E+M G+L+ L + + + G A G+ +L
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
A ++RD NIL+++ N++ K+SDFGL++
Sbjct: 164 ---ANMNYVHRDLAARNILVNS--------------------NLV-----CKVSDFGLSR 195
Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D PE T ++ + APE + TS SDV+SFG+V+ E++T
Sbjct: 196 VLEDDPEATYTTSGGKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 127
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 188 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 30 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 79 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 137 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 170 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 229 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 161 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP---------------GLEYSYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
GD + APE + + +SDV++FGV+L E+ T G P+
Sbjct: 161 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ L+E + YR+ P EG +K +L C +P RP +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
A + +
Sbjct: 263 AFETM 267
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 131
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 192 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 130
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 191 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 138
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGLA+ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++RD N M+ D+ K
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
PK RP E+V LK
Sbjct: 273 PKMRPTFLEIVNLLK 287
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 31 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 80 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 138 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 170
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 171 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 230 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 23 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 72 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 130 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 163 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 222 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 257
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 161 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 22 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 71 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 129 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 162 DNEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 221 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 256
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRDL------------------------ 153
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D +V + + APE + T + SD + FGV L EM T
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++R+ N M+ D+ K
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNC-------------------------MVAHDFTVK 170
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 171 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 227
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 228 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 272
Query: 423 PKARPLMSEVVEALK 437
P RP E+V LK
Sbjct: 273 PNMRPTFLEIVNLLK 287
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 127/315 (40%), Gaps = 66/315 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
LG+G FG V++G N +K VAVKT+N L+ E+L E + +
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALG 244
++V+L+G + L+V E M G L+++L RSL P +++A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A G+A+L+ + ++R+ N M+ D+ K
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNC-------------------------MVAHDFTVK 171
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
+ DFG+ +D E D + + + APE + G T+ SD++SFGVVL E+ +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--- 228
Query: 365 SMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI--KGAQKAAQLAAHCLSRD 422
L E L + ++D G+ ++ L C +
Sbjct: 229 ------------LAEQPYQGLSNEQVLKFVMDG---GYLDQPDNCPERVTDLMRMCWQFN 273
Query: 423 PKARPLMSEVVEALK 437
P RP E+V LK
Sbjct: 274 PNMRPTFLEIVNLLK 288
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 181
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 182 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 290 PNFAIILERIE 300
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 26 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 75 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 133 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 165
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 166 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 225 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 260
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 305 PNFAIILERIE 315
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 134 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 167 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 226 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 261
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 67
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 126
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 127 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 173
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 174 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 222 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 282 PNFAIILERIE 292
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 16 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 65 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 123 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 155
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 156 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 215 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 250
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 75
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 134
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 135 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 181
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 182 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 230 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 290 PNFAIILERIE 300
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D +V + + APE + T + SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 159
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D +V + + APE + T + SD + FGV L EM T
Sbjct: 160 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 92
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 151
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 198
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 199 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 247 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 306
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 307 PNFAIILERIE 317
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 62
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 63 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 121
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 122 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 153
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D +V + + APE + T + SD + FGV L EM T
Sbjct: 154 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 183 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 291 PNFAIILERIE 301
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 47 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 102
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 161
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 208
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 209 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 257 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 316
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 317 PNFAIILERIE 327
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 127 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
GD + APE + + +SDV++FGV+L E+ T G P+
Sbjct: 161 -GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ L+E + YR+ P EG +K +L C +P RP +E+ +
Sbjct: 220 YELLE----------KDYRMERP--EG-----CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
Query: 435 ALKPL 439
A + +
Sbjct: 263 AFETM 267
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 106/240 (44%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D +V + + APE + T + SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 82
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 141
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 188
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 189 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 237 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 296
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 297 PNFAIILERIE 307
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVYSEQ 90
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 149
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 150 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL---TCPGPGRV------- 196
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 197 ------------AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 245 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 305 PNFAIILERIE 315
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 161 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGFVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 76
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 135
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 182
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 183 ------------AKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 231 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 291 PNFAIILERIE 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 92
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 93 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 152
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 153 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 184
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 185 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 243 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 286
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 287 KDRNNRPKFEQIVSILDKL 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 116
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 175
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 222
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 223 ------------AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 271 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 330
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 331 PNFAIILERIE 341
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 99/229 (43%), Gaps = 21/229 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDL-VH 194
LGEG FG V E G KP VAVK L D + + ++E+ + + H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N++ L+G C +D ++ E+ +G+L +L R P GL + +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP---------------GLEYSYN 179
Query: 255 EAERPVIYRDFKT-SNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAK 312
+ P K + R Y CI+ L N+L + N K++DFGLA+
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D D +T + APE + T +SDV+SFGV+L E+ T
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 136/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 157
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 216 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 259
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 260 KDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 82
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 83 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 142
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L + ++RD NIL+++ N++
Sbjct: 143 GIASGMKYLSDMG---YVHRDLAARNILINS--------------------NLV-----C 174
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 175 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 233 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 276
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 277 KDRNNRPKFEQIVSILDKL 295
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 122/311 (39%), Gaps = 60/311 (19%)
Query: 120 TFNDLKLATR-NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQ 177
+ +DLK R N LG G FG V++G + P + L VAVKTL Q
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDP----SPLQVAVKTLPEVCSEQ 93
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LP 234
++L E + H N+V+ IG ++ R ++ E M G L++ L R + P P
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQP 152
Query: 235 WSIRM----KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
S+ M +A A G +L E I+RD N LL G+
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTC---PGPGRV------- 199
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
AK+ DFG+A+D M + PE M G TS++D +
Sbjct: 200 ------------AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
Query: 351 SFGVVLLEMLT---------------------GRRSMDKNRPNGEHNLVEWARPHLGERR 389
SFGV+L E+ + GR KN P + ++ H E R
Sbjct: 248 SFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 307
Query: 390 RFYRLIDPRLE 400
+ +I R+E
Sbjct: 308 PNFAIILERIE 318
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 50
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 51 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 108
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 109 -AAQIASGMAYVERMN---YVHRDLRAANILVG-------------------------EN 139
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 140 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 198
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 199 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 242
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 243 KDPEERP 249
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 52
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 53 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 111 -AAQIASGMAYVERMN---YVHRDLRAANILVG-------------------------EN 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 142 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 200
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 201 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 244
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 245 KDPEERP 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E+M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL + D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 68
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 69 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 127
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 128 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 159
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D V + + APE + T + SD + FGV L EM T
Sbjct: 160 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 46/254 (18%)
Query: 110 LKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAV 168
+KV +R+ K T R +LG G FG V KG WI E + + V +
Sbjct: 3 MKVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCI 47
Query: 169 KTL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLF 227
K + + G Q + + +G L H ++V+L+G C +L V +++P GSL +H+
Sbjct: 48 KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVR 106
Query: 228 RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCI 287
+ L + + + AKG+ +L E +++R+ N+LL +
Sbjct: 107 QHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS------------- 150
Query: 288 YYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS 347
+++DFG+A P DK + + + A E + G T +S
Sbjct: 151 ------------PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198
Query: 348 DVYSFGVVLLEMLT 361
DV+S+GV + E++T
Sbjct: 199 DVWSYGVTVWELMT 212
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 120/325 (36%), Gaps = 76/325 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE----VNFLGDL 192
LG G FG V +E +K +TVAVK L +E L +++LG+
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 236
H+N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 237 -IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + AKG+AFL A + I+RD NILL R
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRI------------------ 206
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
K+ DFGLA+ V + APE + T SDV+S+G+
Sbjct: 207 -------TKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF 259
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQL- 414
L E+ + S P + +FY++I EG + A++
Sbjct: 260 LWELFSLGSS---------------PYPGMPVDSKFYKMIK---EGFRMLSPEHAPAEMY 301
Query: 415 --AAHCLSRDPKARPLMSEVVEALK 437
C DP RP ++V+ ++
Sbjct: 302 DIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 105/240 (43%), Gaps = 39/240 (16%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL---QGHKEW 182
+ ++ R LG+G FG V +G AP G ++VAVK L D L + ++
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRG----EWDAP--SGKTVSVAVKCLKPDVLSQPEAMDDF 58
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ EVN + L H NL++L G + + +V E P GSL + L + + A
Sbjct: 59 IREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYA 117
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ A+G+ +L E++R I+RD N+LL A R
Sbjct: 118 VQVAEGMGYL--ESKR-FIHRDLAARNLLL-ATRD------------------------L 149
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFGL + P+ D V + + APE + T + SD + FGV L EM T
Sbjct: 150 VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 49/256 (19%)
Query: 119 FTFNDLKLATRNF---------RPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVK 169
FTF D A R F + E ++G G FG V G ++ G + VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIK 63
Query: 170 TLNHDGL-QGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
TL + +++L+E + +G H N++ L G + +++ E+M GSL+ L +
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ + G G+ +L ++ ++RD NIL+++
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNS-------------- 166
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
N++ K+SDFG+++ D PE T ++ + APE + TS
Sbjct: 167 ------NLV-----CKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTS 213
Query: 346 RSDVYSFGVVLLEMLT 361
SDV+S+G+V+ E+++
Sbjct: 214 ASDVWSYGIVMWEVMS 229
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + + H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKIRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 46/253 (18%)
Query: 111 KVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVK 169
KV +R+ K T R +LG G FG V KG WI E + + V +K
Sbjct: 22 KVLARIFKET---------ELRKLKVLGSGVFGTVHKGVWIPEGESIKI------PVCIK 66
Query: 170 TL-NHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
+ + G Q + + +G L H ++V+L+G C +L V +++P GSL +H+ +
Sbjct: 67 VIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQ 125
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
L + + + AKG+ +L E +++R+ N+LL +
Sbjct: 126 HRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKS-------------- 168
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
+++DFG+A P DK + + + A E + G T +SD
Sbjct: 169 -----------PSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSD 217
Query: 349 VYSFGVVLLEMLT 361
V+S+GV + E++T
Sbjct: 218 VWSYGVTVWELMT 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLAAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 123/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 17 LGAGQFGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 66 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+R+ + +NIL+ + K++DFGLA+
Sbjct: 124 --RNYIHRNLRAANILVS-------------------------DTLSCKIADFGLARLIE 156
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 157 DNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 216 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 251
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGAVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +G L + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 130 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 164 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 212
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 213 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
Query: 435 ALKPL 439
A + +
Sbjct: 266 AFETM 270
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 137/327 (41%), Gaps = 73/327 (22%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
+++ L+TR +G G FG V+KG + +G VK + V + Q +
Sbjct: 36 SEVMLSTR-------IGSGSFGTVYKG--KWHGDVAVK-----ILKVVDPTPEQFQAFRN 81
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
EV L H+N++ +GY +D+ +V ++ SL HL + + I
Sbjct: 82 ---EVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI 137
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
A A+G+ +LH + +I+RD K++NI L + GL
Sbjct: 138 ARQTAQGMDYLHA---KNIIHRDMKSNNIFL---------------HEGL---------- 169
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH---LTSRSDVYSFGVVLLE 358
K+ DFGLA + + G+ + APE + + +SDVYS+G+VL E
Sbjct: 170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE 229
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI-----DPRLEGHFSIKGAQKAAQ 413
++TG E H+ R + ++ P L + K KA +
Sbjct: 230 LMTG----------------ELPYSHINNRDQIIFMVGRGYASPDLSKLY--KNCPKAMK 271
Query: 414 -LAAHCLSRDPKARPLMSEVVEALKPL 439
L A C+ + + RPL +++ +++ L
Sbjct: 272 RLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 56/240 (23%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLA 226
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 227 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 285
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+ A+G+AF+ + R I+RD + +NIL+ A
Sbjct: 286 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLV------------------------ 316
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLA+ G + + APE + G T +SDV+SFG++L+E++T
Sbjct: 317 -CKIADFGLARVGAKF-----------PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 168 -GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
A + +
Sbjct: 270 AFETM 274
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 40/241 (16%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L + E ++G G FG V G ++ G V VA+KTL + + ++L
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDV------AVAIKTLKVGYTEKQRRDFL 92
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+V L G ++V EFM G+L+ L + + +
Sbjct: 93 CEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR 152
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L A+ ++RD NIL+++ N++
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNS--------------------NLV-----C 184
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + APE + TS SDV+S+G+V+ E++
Sbjct: 185 KVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
Query: 361 T 361
+
Sbjct: 243 S 243
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSK--KEISVAIKTLKVGYTEKQRRDFL 94
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 95 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 154
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 155 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 186
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 187 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 245 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 288
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 289 KDRNNRPKFEQIVSILDKL 307
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 122/294 (41%), Gaps = 62/294 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G G V+ G+ NG VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQAGEVWMGYY--NGHT--------KVAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L + + ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
R I+RD + +NIL+ + K++DFGLA+
Sbjct: 128 --RNYIHRDLRAANILVS-------------------------DTLSCKIADFGLARLIE 160
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE- 374
+ + T + APE + G T +SDV+SFG++L E++T R N E
Sbjct: 161 DAEXT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
Query: 375 -HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
NL R YR++ P ++ QL C P+ RP
Sbjct: 220 IQNL-----------ERGYRMVRPD-------NCPEELYQLMRLCWKERPEDRP 255
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 61
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +G L + L + L LP + M
Sbjct: 62 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM- 119
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 120 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 150
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 151 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 209
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 210 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 253
Query: 421 RDPKARP 427
+DP+ RP
Sbjct: 254 KDPEERP 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
A + +
Sbjct: 270 AFETM 274
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 58/312 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 46 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A+G+AFL A + I+RD N+LL + AK+
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGHVAKI 193
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFGLA+D V + APE + T +SDV+S+G++L E+ S
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----S 249
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
+ N P + +FY+L+ + + + C + +P
Sbjct: 250 LGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 298
Query: 426 RPLMSEVVEALK 437
RP ++ L+
Sbjct: 299 RPTFQQICSFLQ 310
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 58/312 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALGA 245
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A+G+AFL A + I+RD N+LL + AK+
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGHVAKI 201
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFGLA+D V + APE + T +SDV+S+G++L E+ S
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----S 257
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
+ N P + +FY+L+ + + + C + +P
Sbjct: 258 LGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH 306
Query: 426 RPLMSEVVEALK 437
RP ++ L+
Sbjct: 307 RPTFQQICSFLQ 318
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 135/319 (42%), Gaps = 56/319 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L N + ++G G FG V G ++ P K ++VA+KTL + + ++L
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLK----LPSKKE--ISVAIKTLKVGYTEKQRRDFL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + +G H N+++L G + ++V E M GSL++ L + + +
Sbjct: 66 GEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G A G+ +L ++ ++RD NIL+++ N++
Sbjct: 126 GIASGMKYL---SDMGYVHRDLAARNILINS--------------------NLV-----C 157
Query: 304 KLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+SDFGL++ D PE T ++ + +PE + TS SDV+S+G+VL E++
Sbjct: 158 KVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ RP E + + + YRL P + QL C
Sbjct: 216 SY-----GERPYWEMS----NQDVIKAVDEGYRLPPP-------MDCPAALYQLMLDCWQ 259
Query: 421 RDPKARPLMSEVVEALKPL 439
+D RP ++V L L
Sbjct: 260 KDRNNRPKFEQIVSILDKL 278
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 132
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 133 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
A + +
Sbjct: 270 AFETM 274
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
A + +
Sbjct: 270 AFETM 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 129 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKH----------TKVAVKTMK-PGSMSVEAFLA 232
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 233 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 291
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+ A+G+AF+ + R I+RD + +NIL+ A
Sbjct: 292 QI--AEGMAFIEQ---RNYIHRDLRAANILVSASLV------------------------ 322
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLA+ + + T + APE + G T +SDV+SFG++L+E++T
Sbjct: 323 -CKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 127
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 128 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 131
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 132 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 167 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 215
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 216 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
Query: 435 ALKPL 439
A + +
Sbjct: 269 AFETM 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 142 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 175
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 176 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 224
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 225 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
Query: 435 ALKPL 439
A + +
Sbjct: 278 AFETM 282
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 165 -GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
A + +
Sbjct: 267 AFETM 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 46/240 (19%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
++ + + E LG G FG V+ ++ VAVKT+ G + +LA
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLA 59
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKI 241
E N + L H LVKL + + ++ EFM +GSL + L PLP I
Sbjct: 60 EANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+ A+G+AF+ + R I+RD + +NIL+ A
Sbjct: 119 QI--AEGMAFIEQ---RNYIHRDLRAANILVSA-------------------------SL 148
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLA+ + + T + APE + G T +SDV+SFG++L+E++T
Sbjct: 149 VCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 130 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 164 -GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 212
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 213 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
Query: 435 ALKPL 439
A + +
Sbjct: 266 AFETM 270
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 60/251 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHL 195
+GEG FG VF+ G P +P T VAVK L + ++ E + + +
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFT--MVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL------------------------ 231
N+VKL+G C L++E+M G L F RS+
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNE--FLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 232 -PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
PL + ++ IA A G+A+L +ER ++RD T N L+
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVG----------------- 208
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
NM+ K++DFGL+++ D + PE + T+ SDV+
Sbjct: 209 ---ENMV-----VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 260
Query: 351 SFGVVLLEMLT 361
++GVVL E+ +
Sbjct: 261 AYGVVLWEIFS 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 134 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 167
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 168 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 216
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 217 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
Query: 435 ALKPL 439
A + +
Sbjct: 270 AFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 165 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
A + +
Sbjct: 267 AFETM 271
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 51
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 52 QEAQVMKKLRHEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 109
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 110 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 140
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 141 LVCKVADFGLARLIEDNEXT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 200 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 243
Query: 421 RDPKARP 427
++P+ RP
Sbjct: 244 KEPEERP 250
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 228 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+R+ N L+ +++ K++DFGL++
Sbjct: 336 -KKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 369
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 370 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 418
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 419 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
Query: 435 ALKPL 439
A + +
Sbjct: 472 AFETM 476
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 127/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L+G C + ++ EFM G+L ++L + + + L A ++ E
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ---EVNAVVLLYMATQISSAMEYL 127
Query: 257 ERP-VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
E+ I+RD N L+ +++ K++DFGL++
Sbjct: 128 EKKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 163 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 211
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 212 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
Query: 435 ALKPL 439
A + +
Sbjct: 265 AFETM 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 131 -KKNFIHRDLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 165 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 213
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 214 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
Query: 435 ALKPL 439
A + +
Sbjct: 267 AFETM 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 62/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
A+G+AFL A + I+RD N+LL +
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGH 201
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
AK+ DFGLA+D V + APE + T +SDV+S+G++L E+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF- 260
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
S+ N P + +FY+L+ + + + C +
Sbjct: 261 ---SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 422 DPKARPLMSEVVEALK 437
+P RP ++ L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 122/322 (37%), Gaps = 75/322 (23%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEV 186
NFR E +G G F V++ +G + VA+K + L K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDG---------VPVALKKVQIFDLMDAKARADCIKEI 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE---NHLFRRSLPLPWSIRMKIAL 243
+ L L H N++K IED++ +V E G L H ++ +P K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
L +H R V++RD K +N+ + A G G G FF++
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGL----GRFFSS-------- 188
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
KT + ++GT Y +PE + +SD++S G +L EM
Sbjct: 189 ---------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM---- 229
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGHFSIKGAQKAAQLA 415
P G++ Y L P H+S ++ QL
Sbjct: 230 --------------AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS----EELRQLV 271
Query: 416 AHCLSRDPKARPLMSEVVEALK 437
C++ DP+ RP ++ V + K
Sbjct: 272 NMCINPDPEKRPDVTYVYDVAK 293
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A G+A++ ++RD + +NIL+ G+ C K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
+DFGLA+ + + T + APE + G T +SDV+SFG++L E+ T R
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
N R L + R YR+ P + + L C ++P+
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
RP
Sbjct: 425 RP 426
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A G+A++ ++RD + +NIL+ G+ C K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
+DFGLA+ + + T + APE + G T +SDV+SFG++L E+ T R
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
N R L + R YR+ P + + L C ++P+
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
RP
Sbjct: 425 RP 426
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 62/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG---------- 244
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 245 ---AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
A+G+AFL A + I+RD N+LL +
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------NGH 201
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
AK+ DFGLA+D V + APE + T +SDV+S+G++L E+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF- 260
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
S+ N P + +FY+L+ + + + C +
Sbjct: 261 ---SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 422 DPKARPLMSEVVEALK 437
+P RP ++ L+
Sbjct: 307 EPTHRPTFQQICSFLQ 322
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 129/307 (42%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 310
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 311 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 368
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ G+ C
Sbjct: 369 -AAQIASGMAYVERMN---YVHRDLRAANILV--------GENLVC-------------- 402
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 403 ---KVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 459 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 502
Query: 421 RDPKARP 427
++P+ RP
Sbjct: 503 KEPEERP 509
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 60/312 (19%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
H N+++L G ++V E+M GSL+ F R+ ++I + + G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+L + ++RD N+L+D+ N++ K+SDFGL
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDS--------------------NLV-----CKVSDFGL 197
Query: 311 AK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
++ D P+ T ++ + APE + +S SDV+SFGVV+ E+L
Sbjct: 198 SRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
N N R + YRL P + QL C +D RP
Sbjct: 256 WNMTN---------RDVISSVEEGYRLPAP-------MGCPHALHQLMLDCWHKDRAQRP 299
Query: 428 LMSEVVEALKPL 439
S++V L L
Sbjct: 300 RFSQIVSVLDAL 311
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ L +LH + +I+RD K NIL D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
+ KL+DFG++ + S +GT + APE VM R +DV+S G+
Sbjct: 172 GDIKLADFGVSAKNTRTIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
L+EM
Sbjct: 230 LIEM 233
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 54
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 55 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM- 112
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A A G+A++ ++RD + +NIL+ ++
Sbjct: 113 -AAQIASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 143
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 144 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 202
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 203 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 246
Query: 421 RDPKARP 427
++P+ RP
Sbjct: 247 KEPEERP 253
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 126/302 (41%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGNMSPEAFLQEAQV 233
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 234 MKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 290
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A G+A++ ++RD + +NIL+ G+ C K+
Sbjct: 291 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 322
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
+DFGL + + + T + APE + G T +SDV+SFG++L E+ T R
Sbjct: 323 ADFGLGRLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 381
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
N R L + R YR+ P + + L C +DP+
Sbjct: 382 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKDPEE 425
Query: 426 RP 427
RP
Sbjct: 426 RP 427
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 100/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ L +LH + +I+RD K NIL D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
+ KL+DFG++ + S +GT + APE VM R +DV+S G+
Sbjct: 172 GDIKLADFGVSAKNTRXIQRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
L+EM
Sbjct: 230 LIEM 233
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 134/322 (41%), Gaps = 60/322 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V G ++ G + VA+KTL + + ++L+E + +G
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREI------FVAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + +++ EFM GSL++ L + + + G A G+ +L
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
A+ ++R NIL+++ N++ K+SDFGL++
Sbjct: 126 ---ADMNYVHRALAARNILVNS--------------------NLV-----CKVSDFGLSR 157
Query: 313 DGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK 368
+ T +G + APE + TS SDV+S+G+V+ E+++ G R
Sbjct: 158 FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 217
Query: 369 NRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPL 428
N +E + YRL P + QL C +D RP
Sbjct: 218 MTNQDVINAIE----------QDYRLPPP-------MDCPSALHQLMLDCWQKDRNHRPK 260
Query: 429 MSEVVEALKPL---PN-LKDMA 446
++V L + PN LK MA
Sbjct: 261 FGQIVNTLDKMIRNPNSLKAMA 282
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 60/312 (19%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G G V G + G V VA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVP------VAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLA 250
H N+++L G ++V E+M GSL+ F R+ ++I + + G G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+L + ++RD N+L+D+ N++ K+SDFGL
Sbjct: 166 YLSDLG---YVHRDLAARNVLVDS--------------------NLV-----CKVSDFGL 197
Query: 311 AK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
++ D P+ T ++ + APE + +S SDV+SFGVV+ E+L
Sbjct: 198 SRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
N N R + YRL P + QL C +D RP
Sbjct: 256 WNMTN---------RDVISSVEEGYRLPAP-------MGCPHALHQLMLDCWHKDRAQRP 299
Query: 428 LMSEVVEALKPL 439
S++V L L
Sbjct: 300 RFSQIVSVLDAL 311
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 225 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+R+ N L+ +++ K++DFGL++
Sbjct: 333 -KKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 366
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 367 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 415
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 416 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
Query: 435 ALKPL 439
A + +
Sbjct: 469 AFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V++G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 267 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+R+ N L+ +++ K++DFGL++
Sbjct: 375 -KKNFIHRNLAARNCLVG-------------------------ENHLVKVADFGLSRLMT 408
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
GD + APE + + +SDV++FGV+L E+ T S
Sbjct: 409 -GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS---------- 457
Query: 376 NLVEWARPHLG-ERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P+ G + + Y L++ +K +L C +P RP +E+ +
Sbjct: 458 -------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
Query: 435 ALKPL 439
A + +
Sbjct: 511 AFETM 515
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 129/310 (41%), Gaps = 56/310 (18%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDL 192
E ++G G FG V G ++ G L VA+KTL + + ++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRE------LPVAIKTLKVGYTEKQRRDFLGEASIMGQF 80
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++ L G + ++V E+M GSL+ L + + + G + G+ +L
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
++ ++RD NIL+++ N++ K+SDFGL++
Sbjct: 141 ---SDMGYVHRDLAARNILINS--------------------NLV-----CKVSDFGLSR 172
Query: 313 ---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKN 369
D PE T ++ + APE + TS SDV+S+G+V+ E+++
Sbjct: 173 VLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSY-----GE 225
Query: 370 RPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLM 429
RP E + + YRL P + QL C ++ +RP
Sbjct: 226 RPYWEMT----NQDVIKAVEEGYRLPSP-------MDCPAALYQLMLDCWQKERNSRPKF 274
Query: 430 SEVVEALKPL 439
E+V L L
Sbjct: 275 DEIVNMLDKL 284
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 127/302 (42%), Gaps = 64/302 (21%)
Query: 130 NFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
+ R E LG+G FG V+ G W NGT VA+KTL G + +L E
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFLQEAQV 232
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALGA 245
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 233 MKKLRHEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 289
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
A G+A++ ++RD + +NIL+ G+ C K+
Sbjct: 290 ASGMAYVER---MNYVHRDLRAANILV--------GENLVC-----------------KV 321
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
+DFGLA+ + + T + APE + G T +SDV+SFG++L E+ T R
Sbjct: 322 ADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV 380
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
N R L + R YR+ P + + L C ++P+
Sbjct: 381 PYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWRKEPEE 424
Query: 426 RP 427
RP
Sbjct: 425 RP 426
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 59 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ A G+A++ ++RD + +NIL+ ++
Sbjct: 118 AQI--ASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 147
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 148 LVCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 207 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 250
Query: 421 RDPKARP 427
++P+ RP
Sbjct: 251 KEPEERP 257
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 41/236 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA--EVN 187
+F +LG+G FG VF +P +G A+K L L+ E +
Sbjct: 29 HFELLKVLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 188 FLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L D+ H +VKL Y + + +L L+ +F+ G L L + + ++ +A A
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELA 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
GL LH +IYRD K NILLD ++ + KL+
Sbjct: 141 LGLDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIKLT 172
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+K+ + +K S GT Y APE V + +D +S+GV++ EMLTG
Sbjct: 173 DFGLSKEAIDHEKKAYS--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
++ + R E LG+G FG V+ G W NGT VA+KTL G + +L
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTW---NGTT--------RVAIKTLK-PGTMSPEAFL 58
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMK 240
E + L H LV+L + ++ +V E+M +GSL + L + L LP + M
Sbjct: 59 QEAQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMS 117
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ A G+A++ ++RD + +NIL+ ++
Sbjct: 118 AQI--ASGMAYVER---MNYVHRDLRAANILVG-------------------------EN 147
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K++DFGLA+ + + T + APE + G T +SDV+SFG++L E+
Sbjct: 148 LVCKVADFGLARLIEDNEWT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 206
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
T R N R L + R YR+ P + + L C
Sbjct: 207 TKGRVPYPGMVN---------REVLDQVERGYRMPCPP-------ECPESLHDLMCQCWR 250
Query: 421 RDPKARP 427
++P+ RP
Sbjct: 251 KEPEERP 257
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 51/244 (20%)
Query: 127 ATRNFRPES---LLGE-GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
TR+ PE ++GE G FG V+K +E T + A K ++ + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELEDY 54
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E++ L H N+VKL+ ++ ++ EF G+++ + PL S +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 114
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
L +LH + +I+RD K NIL D +
Sbjct: 115 KQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------DGD 146
Query: 303 AKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
KL+DFG++ + +T + R +GT + APE VM R +DV+S G+
Sbjct: 147 IKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 203
Query: 356 LLEM 359
L+EM
Sbjct: 204 LIEM 207
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 50/244 (20%)
Query: 127 ATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
TR+ PE LG+G FG V+K +E T + A K ++ + +
Sbjct: 29 VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKE---------TSVLAAAKVIDTKSEEELE 79
Query: 181 EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+++ E++ L H N+VKL+ ++ ++ EF G+++ + PL S
Sbjct: 80 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV 139
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ L +LH + +I+RD K NIL D
Sbjct: 140 VCKQTLDALNYLH---DNKIIHRDLKAGNILFTL-------------------------D 171
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSR-----SDVYSFGVV 355
+ KL+DFG++ +GT + APE VM R +DV+S G+
Sbjct: 172 GDIKLADFGVSAKNTR--XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 356 LLEM 359
L+EM
Sbjct: 230 LIEM 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 120/318 (37%), Gaps = 64/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 239
N+V L+G C L++ E+ G L N L R+ P L +S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+ A+G+AFL A + I+RD N+LL
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLT-------------------------N 201
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
+ AK+ DFGLA+D V + APE + T +SDV+S+G++L E+
Sbjct: 202 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
S+ N P + +FY+L+ + + + C
Sbjct: 262 F----SLGLN-----------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 306
Query: 420 SRDPKARPLMSEVVEALK 437
+ +P RP ++ L+
Sbjct: 307 ALEPTHRPTFQQICSFLQ 324
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 123/306 (40%), Gaps = 62/306 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VAVK + +G E+ E + L H
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LVK G C ++ +V E++ G L N+L L S +++ +G+AFL
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
I+RD N L+D +D K+SDFG+ +
Sbjct: 125 ---FIHRDLAARNCLVD-------------------------RDLCVKVSDFGMTRYVL- 155
Query: 317 GDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
D +VS+ +GT ++APE +S+SDV++FG+++ E+ + + N
Sbjct: 156 -DDQYVSS--VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS 212
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
E L + + R YR P L + Q+ C P+ RP +++
Sbjct: 213 EVVL------KVSQGHRLYR---PHL-------ASDTIYQIMYSCWHELPEKRPTFQQLL 256
Query: 434 EALKPL 439
+++PL
Sbjct: 257 SSIEPL 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 19 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
++RD NIL+ + KL DFGL++
Sbjct: 132 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 163
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
+ D S + + +PE + T+ SDV+ F V + E+L S K
Sbjct: 164 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 218
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N + +G + RL P L L C DP RP +E+V
Sbjct: 219 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 266
Query: 435 ALKPLPNL-KDMA 446
+L + + KD+A
Sbjct: 267 SLSDVYQMEKDIA 279
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 31 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
++RD NIL+ + KL DFGL++
Sbjct: 144 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 175
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
+ D S + + +PE + T+ SDV+ F V + E+L S K
Sbjct: 176 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 230
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N + +G + RL P L L C DP RP +E+V
Sbjct: 231 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 278
Query: 435 ALKPLPNL-KDMA 446
+L + + KD+A
Sbjct: 279 SLSDVYQMEKDIA 291
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVH 194
+LGEG FG V++G + G + VAVKT D +KE +++E + +L H
Sbjct: 15 ILGEGFFGEVYEGVYTNHK------GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
++RD NIL+ + KL DFGL++
Sbjct: 128 IN---CVHRDIAVRNILVASPEC-------------------------VKLGDFGLSRYI 159
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE 374
+ D S + + +PE + T+ SDV+ F V + E+L S K
Sbjct: 160 EDEDYYKASVTRLPI-KWMSPESINFRRFTTASDVWMFAVCMWEIL----SFGKQPFFWL 214
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N + +G + RL P L L C DP RP +E+V
Sbjct: 215 EN-----KDVIGVLEKGDRLPKPDL-------CPPVLYTLMTRCWDYDPSDRPRFTELVC 262
Query: 435 ALKPLPNL-KDMA 446
+L + + KD+A
Sbjct: 263 SLSDVYQMEKDIA 275
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
L + + +G+G FG V G G VAVK + +D + +LAE
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAE 236
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L R L +K +L
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 296
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ + +L ++RD N+L+ +D A
Sbjct: 297 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 328
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
K+SDFGL K+ ST+ G + APE + +++SDV+SFG++L E+
Sbjct: 329 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 48/236 (20%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
L + + +G+G FG V G N VAVK + +D + +LAE
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L R L +K +L
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 115
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ + +L ++RD N+L+ +D A
Sbjct: 116 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 147
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
K+SDFGL K E T + ++ + APE + +++SDV+SFG++L E+
Sbjct: 148 KVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 173
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 174 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 234 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 278
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 279 WHGEPSQRPTFSELVEHL 296
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
L + + +G+G FG V G N VAVK + +D + +LAE
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGN-----------KVAVKCIKNDATA--QAFLAE 64
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L R L +K +L
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ + +L ++RD N+L+ +D A
Sbjct: 125 DVCEAMEYLE---GNNFVHRDLAARNVLVS-------------------------EDNVA 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
K+SDFGL K+ ST+ G + APE + +++SDV+SFG++L E+
Sbjct: 157 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
L + + +G+G FG V G G VAVK + +D + +LAE
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAE 49
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIAL 243
+ + L H NLV+L+G +E+ L +V E+M +GSL ++L R L +K +L
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL 109
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ + +L ++RD N+L+ +D A
Sbjct: 110 DVCEAMEYLEGNN---FVHRDLAARNVLVS-------------------------EDNVA 141
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
K+SDFGL K+ ST+ G + APE + +++SDV+SFG++L E+
Sbjct: 142 KVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 121/316 (38%), Gaps = 63/316 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIR------------MK 240
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ AKG+ FL A R I+RD NILL
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV----------------------- 186
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFGLA+D + + APE + T +SDV+SFGV+L E+
Sbjct: 187 --VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
+ S P + + R G R R P + Q C
Sbjct: 245 SLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWH 289
Query: 421 RDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 290 GEPSQRPTFSELVEHL 305
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 121/317 (38%), Gaps = 64/317 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMKI----------- 241
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 242 --ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+ AKG+ FL A R I+RD NILL
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV---------------------- 186
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
K+ DFGLA+D + + APE + T +SDV+SFGV+L E+
Sbjct: 187 ---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
+ S P + + R G R R P + Q C
Sbjct: 244 FSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCW 288
Query: 420 SRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 289 HGEPSQRPTFSELVEHL 305
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAE 185
++ F+ LG G + V+KG + TG+ VA+K + D +G + E
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKG---------LNKTTGVYVALKEVKLDSEEGTPSTAIRE 53
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIA-- 242
++ + +L H N+V+L +++ LV+EFM L+ ++ R++ P + + +
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 243 --LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GLAF HE +++RD K N+L++ G FG +G+ N
Sbjct: 113 FQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF---- 165
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEM 359
S+ V+ T Y AP+ +M S S D++S G +L EM
Sbjct: 166 ----------------------SSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEM 202
Query: 360 LTGR 363
+TG+
Sbjct: 203 ITGK 206
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 182
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 243 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 287
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 288 WHGEPSQRPTFSELVEHL 305
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 121/314 (38%), Gaps = 61/314 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
LN+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
AKG+ FL A R I+RD NILL
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV------------------------- 182
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
K+ DFGLA+D + + APE + T +SDV+SFGV+L E+ +
Sbjct: 183 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
S P + + R G R R P + Q C +
Sbjct: 243 GAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGE 287
Query: 423 PKARPLMSEVVEAL 436
P RP SE+VE L
Sbjct: 288 PSQRPTFSELVEHL 301
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
+R ++ + + + T+N FR +LG+GGFG V + G K
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
K+ L +VN V + Y E D LV M G L+ H++
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
P + + A GL LH E ++YRD K NILLD ++G
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLD-----DHG--------- 323
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
+ ++SD GLA PEG + RV GT GY APE V T D +
Sbjct: 324 -----------HIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWW 369
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
+ G +L EM+ G+ + + + VE RL+ E +S + + +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVE-------------RLVKEVPE-EYSERFSPQ 415
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L +DP R
Sbjct: 416 ARSLCSQLLCKDPAER 431
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 123/318 (38%), Gaps = 65/318 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 195 LNLVKLIGYCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 238
LN+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
+ + AKG+ FL A R I+RD NILL
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLS------------------------- 219
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+ K+ DFGLA+D + + APE + T +SDV+SFGV+L E
Sbjct: 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
+ + S P + + R G R R P + Q C
Sbjct: 280 IFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTMLDC 324
Query: 419 LSRDPKARPLMSEVVEAL 436
+P RP SE+VE L
Sbjct: 325 WHGEPSQRPTFSELVEHL 342
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 114 SRLRKFTFNDLKLATRN-FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
+R ++ + + + T+N FR +LG+GGFG V + G K
Sbjct: 168 NRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG 227
Query: 173 HDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIE-DDQRLLVYEFMPRGSLENHLFRRSL 231
K+ L +VN V + Y E D LV M G L+ H++
Sbjct: 228 EAMALNEKQILEKVNS-------RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 232 P-LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
P + + A GL LH E ++YRD K NILLD ++G
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLD-----DHG--------- 323
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
+ ++SD GLA PEG + RV GT GY APE V T D +
Sbjct: 324 -----------HIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTFSPDWW 369
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
+ G +L EM+ G+ + + + VE RL+ E +S + + +
Sbjct: 370 ALGCLLYEMIAGQSPFQQRKKKIKREEVE-------------RLVKEVPE-EYSERFSPQ 415
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L +DP R
Sbjct: 416 ARSLCSQLLCKDPAER 431
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 121/314 (38%), Gaps = 61/314 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 242
LN+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
AKG+ FL A R I+RD NILL
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNV------------------------- 182
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
K+ DFGLA+D + + APE + T +SDV+SFGV+L E+ +
Sbjct: 183 VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
S P + + R G R R P + Q C +
Sbjct: 243 GAS---PYPGVKIDEEFXRRLKEGTRMRAPDYTTPEM------------YQTMLDCWHGE 287
Query: 423 PKARPLMSEVVEAL 436
P RP SE+VE L
Sbjct: 288 PSQRPTFSELVEHL 301
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 58/305 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G +G V+ G V LTVAVKTL D ++ +E+L E + ++ H N
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEE 255
LV+L+G C + +V E+MP G+L ++L + + + + +A + + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++ I+RD N L+ +++ K++DFGL++
Sbjct: 148 -KKNFIHRDLAARNCLVG-------------------------ENHVVKVADFGLSRLMT 181
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDKNRPNGE 374
GD + APE + + +SDV++FGV+L E+ T G +
Sbjct: 182 -GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 240
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
++L+E + YR+ P EG K +L C P RP +E +
Sbjct: 241 YDLLE----------KGYRMEQP--EG-----CPPKVYELMRACWKWSPADRPSFAETHQ 283
Query: 435 ALKPL 439
A + +
Sbjct: 284 AFETM 288
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 122/304 (40%), Gaps = 29/304 (9%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL-VH 194
LG G FG V +E K L VAVK L KE L +E+ + L H
Sbjct: 39 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V L+G C L++ E+ G L N L R++ + + +L + L +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAM-----LGPSLAPGQDPEGLDK 149
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD-YNAKLSDFGLAKD 313
E RP+ RD + + + CI+ + N+L + + AK+ DFGLA+D
Sbjct: 150 EDGRPLELRDL--LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
V + APE + T +SDV+S+G++L E+ S+ N
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF----SLGLN---- 259
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
P + +FY+L+ + + + C + +P RP ++
Sbjct: 260 -------PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQIC 312
Query: 434 EALK 437
L+
Sbjct: 313 SFLQ 316
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
LN+V L+G C + L+V EF G+L +L FR+ ++
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 150
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
P+ R+ K L+ + EE +Y+DF T L+ +
Sbjct: 151 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 210
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
+ CI+ L N+L + N K+ DFGLA+D + + APE
Sbjct: 211 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
+ T +SDV+SFGV+L E+ + S P + + R G R R
Sbjct: 271 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 327
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
P + Q C +P RP SE+VE L
Sbjct: 328 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 40/235 (17%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 189
+ E ++G G FG V G ++ G + VA+KTL + +++L+E + +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
G H N++ L G + +++ E+M GSL+ L + + + G G+
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
+L ++ ++RD NIL+++ N++ K+SDFG
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFG 161
Query: 310 LAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+++ D PE T ++ + APE + TS SDV+S+G+V+ E+++
Sbjct: 162 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 117/320 (36%), Gaps = 69/320 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLVY------------------EFMPRGSLENHLFRRSLPLPWS 236
LN+V L+G C + L+V EF+P L++ L L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
I + AKG+ FL A R I+RD NILL
Sbjct: 153 I--CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNV------------------- 188
Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVL 356
K+ DFGLA+D + + APE + T +SDV+SFGV+L
Sbjct: 189 ------VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 242
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
E+ + S P + + R G R R P + Q
Sbjct: 243 WEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEM------------YQTML 287
Query: 417 HCLSRDPKARPLMSEVVEAL 436
C +P RP SE+VE L
Sbjct: 288 DCWHGEPSQRPTFSELVEHL 307
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
LN+V L+G C + L+V EF G+L +L FR+ ++
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 152
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
P+ R+ K L+ + EE +Y+DF T L+ +
Sbjct: 153 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 212
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
+ CI+ L N+L + N K+ DFGLA+D + + APE
Sbjct: 213 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
+ T +SDV+SFGV+L E+ + S P + + R G R R
Sbjct: 273 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 329
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
P + Q C +P RP SE+VE L
Sbjct: 330 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 30 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 85
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
LN+V L+G C + L+V EF G+L +L FR+ ++
Sbjct: 86 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 145
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
P+ R+ K L+ + EE +Y+DF T L+ +
Sbjct: 146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 205
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
+ CI+ L N+L + N K+ DFGLA+D + + APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
+ T +SDV+SFGV+L E+ + S P + + R G R R
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 322
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
P + Q C +P RP SE+VE L
Sbjct: 323 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 40/235 (17%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-QGHKEWLAEVNFL 189
+ E ++G G FG V G ++ G + VA+KTL + +++L+E + +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
G H N++ L G + +++ E+M GSL+ L + + + G G+
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 250 AFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG 309
+L ++ ++RD NIL+++ N++ K+SDFG
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNS--------------------NLV-----CKVSDFG 155
Query: 310 LAK---DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+++ D PE T ++ + APE + TS SDV+S+G+V+ E+++
Sbjct: 156 MSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 135/344 (39%), Gaps = 60/344 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V ++ + K T TVAVK L +K + E+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL-FRRSLPL----------PWSIRMKIA 242
LN+V L+G C + L+V E+ G+L N+L +R L P +M+
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPG 150
Query: 243 LGAAK----------------------GLAFLHEEAERPVIYRDFKTSNILL----DAVR 276
L K L+ + EE + Y++ T L+ R
Sbjct: 151 LEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVAR 210
Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 335
+ CI+ L N+L + N K+ DFGLA+D + + AP
Sbjct: 211 GMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAP 270
Query: 336 EYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI 395
E + +++SDV+S+GV+L E+ + S P + + +R G R R
Sbjct: 271 ESIFDKIYSTKSDVWSYGVLLWEIFSLGGS---PYPGVQMDEDFCSRLREGMRMRAPEYS 327
Query: 396 DPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPL 439
P + Q+ C RDPK RP +E+VE L L
Sbjct: 328 TPEI------------YQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 48/266 (18%)
Query: 105 KLEE-ELKVASRLRKFTFNDLK-----LATRNFRPESLLGEGGFGCVFKGWIEENGTAPV 158
KLEE EL R R F K L +F S LG G G VFK
Sbjct: 3 KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSH 54
Query: 159 KPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFM 217
KP +GL +A K ++ + + + + E+ L + +V G D + + E M
Sbjct: 55 KP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRA 277
GSL + + +++ +P I K+++ KGL +L E+ + +++RD K SNIL+++ R
Sbjct: 114 DGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RG 169
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
E KL DFG++ + ++ +GT Y +PE
Sbjct: 170 E------------------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPER 201
Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTGR 363
+ H + +SD++S G+ L+EM GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
R
Sbjct: 200 R 200
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 157
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 160
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 161 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 90
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 91 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 150 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 181
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 182 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 75
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 76 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 135 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 166
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 167 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 71
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 72 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 131 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 162
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 163 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
R
Sbjct: 200 R 200
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 131/340 (38%), Gaps = 59/340 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-HKEWLAEVNFLGDL-VH 194
LG G FG V IE + K T TVAVK L H+ ++E+ L + H
Sbjct: 28 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 83
Query: 195 LNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHL----------------FRR------SL 231
LN+V L+G C + L+V EF G+L +L FR+ ++
Sbjct: 84 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI 143
Query: 232 PLPWSIRMKI----------ALGAAKGLAFLHEEAERPVIYRDFKTSNILL----DAVRA 277
P+ R+ K L+ + EE +Y+DF T L+ +
Sbjct: 144 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKG 203
Query: 278 ENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 336
+ CI+ L N+L + N K+ DFGLA+D + + APE
Sbjct: 204 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
Query: 337 YVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLID 396
+ T +SDV+SFGV+L E+ + S P + + R G R R
Sbjct: 264 TIFDRVYTIQSDVWSFGVLLWEIFSLGAS---PYPGVKIDEEFCRRLKEGTRMRAPDYTT 320
Query: 397 PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
P + Q C +P RP SE+VE L
Sbjct: 321 PEM------------YQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 113/253 (44%), Gaps = 45/253 (17%)
Query: 115 RLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
RL F K L +F S LG G G VFK KP +GL +A K +
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLI 101
Query: 172 NHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
+ + + + + E+ L + +V G D + + E M GSL + + +++
Sbjct: 102 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKA 160
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
+P I K+++ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 161 GRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------ 205
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
KL DFG++ + ++ +GT Y +PE + H + +SD++
Sbjct: 206 ------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 351 SFGVVLLEMLTGR 363
S G+ L+EM GR
Sbjct: 250 SMGLSLVEMAVGR 262
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 42/240 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWL 183
+L +F S LG G G VFK KP +GL +A K ++ + + + +
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQII 55
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E+ L + +V G D + + E M GSL + + +++ +P I K+++
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSI 114
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------I 147
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
KL DFG++ G D+ ++ +GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 148 KLCDFGVS--GQLIDE--MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
R
Sbjct: 200 R 200
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 66
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 67 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 126 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 157
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 158 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 101/228 (44%), Gaps = 45/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
LV+L ++ ++ E+M +GSL + L + LP I + A+G+A++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+RD + +N+L+ + K++DFGLA+
Sbjct: 128 R---KNYIHRDLRAANVLVS-------------------------ESLMCKIADFGLARV 159
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+ + T + APE + G T +SDV+SFG++L E++T
Sbjct: 160 IEDNEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
R
Sbjct: 200 R 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EW 182
++L +F S LG G G VFK KP +GL +A K ++ + + +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQI 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ E+ L + +V G D + + E M GSL + + +++ +P I K++
Sbjct: 52 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVS 110
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 111 IAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------------------------ 143
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM G
Sbjct: 144 IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Query: 363 R 363
R
Sbjct: 200 R 200
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 40/227 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
+G G FG VF G + + T VAVK+ K ++L E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V+LIG C + +V E + G L FL E
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDF--------------------------LTFLRTE 206
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDG 314
R R ++ DA Y + CI+ L N L + N K+SDFG++++
Sbjct: 207 GAR---LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+G + APE + G +S SDV+SFG++L E +
Sbjct: 264 ADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 45/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V+ G+ N T VAVKTL G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYN-NST---------KVAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 68
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFLH 253
LV+L +++ ++ EFM +GSL + L + LP I + A+G+A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ I+RD + +N+L+ + K++DFGLA+
Sbjct: 127 ---RKNYIHRDLRAANVLVS-------------------------ESLMCKIADFGLARV 158
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+ + T + APE + G T +S+V+SFG++L E++T
Sbjct: 159 IEDNEYT-AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 68
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 69 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 128 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 159
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 160 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 45/258 (17%)
Query: 110 LKVASRLRKFTFNDLK---LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
L+ RL F K L +F S LG G G VFK KP +GL +
Sbjct: 3 LQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP-SGLVM 53
Query: 167 AVKTLNHDGLQGHK-EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH 225
A K ++ + + + + E+ L + +V G D + + E M GSL +
Sbjct: 54 ARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQ 112
Query: 226 LFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGF 285
+ +++ +P I K+++ KGL +L E+ + +++RD K SNIL+++ R E
Sbjct: 113 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNS-RGE------- 162
Query: 286 CIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS 345
KL DFG++ + ++ +GT Y +PE + H +
Sbjct: 163 -----------------IKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSV 201
Query: 346 RSDVYSFGVVLLEMLTGR 363
+SD++S G+ L+EM GR
Sbjct: 202 QSDIWSMGLSLVEMAVGR 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 59
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 60 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 119 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 150
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 151 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 140/387 (36%), Gaps = 82/387 (21%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+KL +F +LG+G FG VF ++ T A+K L D + +
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 61
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E + V H L + + V E++ G L H+ + S
Sbjct: 62 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 120
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
A GL FLH + ++YRD K NILLD
Sbjct: 121 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD------------------------ 153
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
+D + K++DFG+ K+ GD + GT Y APE ++ D +SFGV+L
Sbjct: 154 -KDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 210
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ-LAA 416
EML G+ +G+ E F+ + R++ F + +K A+ L
Sbjct: 211 EMLIGQSPF-----HGQ-----------DEEELFHSI---RMDNPFYPRWLEKEAKDLLV 251
Query: 417 HCLSRDPKAR----------PLMSEV----VEALKPLPNLKDMASSSYYFQTMQAERIGS 462
R+P+ R PL E+ +E + P + S + E +
Sbjct: 252 KLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNE 311
Query: 463 SPNTRNGIRAQGGSLSRNGQRSLSIPN 489
P RA S+ +N R+ N
Sbjct: 312 KPRLXFADRALINSMDQNMFRNFXFMN 338
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 40/227 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
+G G FG VF G + + T VAVK+ K ++L E L H
Sbjct: 122 IGRGNFGEVFSGRLRADNT---------LVAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V+LIG C + +V E + G L FL E
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDF--------------------------LTFLRTE 206
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKDG 314
R R ++ DA Y + CI+ L N L + N K+SDFG++++
Sbjct: 207 GAR---LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE 263
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+G + APE + G +S SDV+SFG++L E +
Sbjct: 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 56/272 (20%)
Query: 109 ELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAV 168
E+ + ++ ++ ++ L+ F E LGE FG V+KG + G AP + VA+
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAI 61
Query: 169 KTLNHDGLQG--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL 226
KTL D +G +E+ E L H N+V L+G +D +++ + G L L
Sbjct: 62 KTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 227 FRRS-----------------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
RS L P + + + A G+ +L + V+++D T N
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRN 175
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
+L ++ N K+SD GL ++ D + +
Sbjct: 176 VL-------------------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
+ APE +M G + SD++S+GVVL E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
F +LG+G FG VF +++ + + + V +K + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
VN H +VKL Y + + +L L+ +F+ G L L + + ++ +A
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A L LH +IYRD K NILLD ++ + K
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 166
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
L+DFGL+K+ + +K S GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 44/240 (18%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGT--APVKPGTGLTVAVKTLNHDGLQGHKEW 182
K + ++F+ LG G FG V NG A + V +K + H
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
E L + H ++++ G + Q ++ +++ G L + L R+S P + A
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYA 112
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
L +LH + +IYRD K NILLD ++ +
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLD-------------------------KNGH 144
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
K++DFG AK P+ V+ + GT Y APE V T D +SFG+++ EML G
Sbjct: 145 IKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
R+L + + A ++G+ +L AE +++RD NIL+ R
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K+SDFGL++D E D ++ + A E + T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
R+L + + A ++G+ +L AE +++RD NIL+ R
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K+SDFGL++D E D ++ + A E + T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
F +LG+G FG VF +++ + + + V +K + + ++ L E
Sbjct: 25 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 82
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
VN H +VKL Y + + +L L+ +F+ G L L + + ++ +A
Sbjct: 83 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A L LH +IYRD K NILLD ++ + K
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 166
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
L+DFGL+K+ + +K S GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 167 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 41/227 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LGEG +G V+K +E TG VA+K + + +E + E++ + +
Sbjct: 37 LGEGSYGSVYKAIHKE---------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPH 85
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VK G ++ +V E+ GS+ + + R+ L I KGL +LH
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ I+RD K NILL+ + +AKL+DFG+A G
Sbjct: 146 K---IHRDIKAGNILLNT-------------------------EGHAKLADFGVA--GQL 175
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
D V+GT + APE + +D++S G+ +EM G+
Sbjct: 176 TDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 45/238 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV----AVKTLNHDGLQGHKEWLAE 185
F +LG+G FG VF +++ + + + V +K + + ++ L E
Sbjct: 26 QFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE 83
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
VN H +VKL Y + + +L L+ +F+ G L L + + ++ +A
Sbjct: 84 VN------HPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 135
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A L LH +IYRD K NILLD ++ + K
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLD-------------------------EEGHIK 167
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
L+DFGL+K+ + +K S GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 168 LTDFGLSKESIDHEKKAYS--FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 41/240 (17%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWL 183
L R +LG G FG V+KG WI P + VA+K L + + +KE L
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWI------PDGENVKIPVAIKVLRENTSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + +L+G C+ +L V + MP G L +H+ L + +
Sbjct: 68 DEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCM 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+++L + +++RD N+L V++ N+
Sbjct: 127 QIAKGMSYLEDVR---LVHRDLAARNVL---VKSPNH----------------------V 158
Query: 304 KLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLA+ D E + +V + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGLARLLDIDETEYHADGGKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 105/253 (41%), Gaps = 64/253 (25%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTG--LTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
LGEG FG V K TA G TVAVK L + ++ L+E N L +
Sbjct: 31 LGEGEFGKVVKA------TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVN 84
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLE-------------------------NHLFR 228
H +++KL G C +D LL+ E+ GSL +H
Sbjct: 85 HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
R+L + + A ++G+ +L AE +++RD NIL+ R
Sbjct: 145 RALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGR------------ 187
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K+SDFGL++D E D ++ + A E + T++SD
Sbjct: 188 -------------KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD 234
Query: 349 VYSFGVVLLEMLT 361
V+SFGV+L E++T
Sbjct: 235 VWSFGVLLWEIVT 247
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 140/387 (36%), Gaps = 82/387 (21%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+KL +F +LG+G FG VF ++ T A+K L D + +
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKK---------TNQFFAIKALKKDVVLMDDD-- 60
Query: 184 AEVNFLGDLV------HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E + V H L + + V E++ G L H+ + S
Sbjct: 61 VECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSR 119
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
A GL FLH + ++YRD K NILLD
Sbjct: 120 ATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLD------------------------ 152
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
+D + K++DFG+ K+ GD + GT Y APE ++ D +SFGV+L
Sbjct: 153 -KDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLY 209
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ-LAA 416
EML G+ +G+ E F+ + R++ F + +K A+ L
Sbjct: 210 EMLIGQSPF-----HGQ-----------DEEELFHSI---RMDNPFYPRWLEKEAKDLLV 250
Query: 417 HCLSRDPKAR----------PLMSEV----VEALKPLPNLKDMASSSYYFQTMQAERIGS 462
R+P+ R PL E+ +E + P + S + E +
Sbjct: 251 KLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNE 310
Query: 463 SPNTRNGIRAQGGSLSRNGQRSLSIPN 489
P RA S+ +N R+ N
Sbjct: 311 KPRLSFADRALINSMDQNMFRNFXFMN 337
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LG GGFG V + WI ++ TG VA+K + ++E W E+ + L H
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
N+V + +D LL E+ G L +L F L + +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
L +LHE +I+RD K NI+L G Q K+ D
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQP------GP----------------QRLIHKIID 167
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
G AK E D+ + T +GT Y APE + T D +SFG + E +TG R
Sbjct: 168 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 94/237 (39%), Gaps = 46/237 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
LG GGFG V + WI ++ TG VA+K + ++E W E+ + L H
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 196 NLVKL------IGYCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALGAAK 247
N+V + +D LL E+ G L +L F L + +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
L +LHE +I+RD K NI+L G Q K+ D
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQP------GP----------------QRLIHKIID 168
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRR 364
G AK E D+ + T +GT Y APE + T D +SFG + E +TG R
Sbjct: 169 LGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 117/318 (36%), Gaps = 75/318 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTA--PVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDL 192
+LG G FG V N TA K G + VAVK L +E L +E+ + L
Sbjct: 52 VLGSGAFGKVM------NATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 193 -VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP------------------- 232
H N+V L+G C L++E+ G L N+L +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 233 ---LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
L + + A AKG+ FL + ++RD N+L+ +GK
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLV------THGKV------ 210
Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
K+ DFGLA+D V + APE + G T +SDV
Sbjct: 211 -------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 257
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ 409
+S+G++L E+ S+ N P + FY+LI + +
Sbjct: 258 WSYGILLWEIF----SLGVN-----------PYPGIPVDANFYKLIQNGFKMDQPFYATE 302
Query: 410 KAAQLAAHCLSRDPKARP 427
+ + C + D + RP
Sbjct: 303 EIYIIMQSCWAFDSRKRP 320
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 62
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 63 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
A+G+ +L + R +++RD N+L+ + +
Sbjct: 122 QIAEGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 153
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 154 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 138
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ I+RD K +N+LL +G+ KL+DFG+A G
Sbjct: 139 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
D +GT + APE + S++D++S G+ +E+ G + P
Sbjct: 169 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
L+ P P LEG++S + + CL+++P RP E+++
Sbjct: 229 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ I+RD K +N+LL +G+ KL+DFG+A G
Sbjct: 124 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 153
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
D +GT + APE + S++D++S G+ +E+ G + P
Sbjct: 154 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
L+ P P LEG++S + + CL+++P RP E+++
Sbjct: 214 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 164 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 129 RNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKE 181
++ PE L +G+G FG VFKG +N T V VA+K ++ + ++
Sbjct: 21 QSMDPEELFTKLEKIGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIED 71
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
E+ L + K G ++D + ++ E++ GS + L PL + I
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
KGL +LH E + I+RD K +N+LL +G+
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLS-----EHGE------------------- 162
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
KL+DFG+A G D +GT + APE + S++D++S G+ +E+
Sbjct: 163 -VKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR 219
Query: 362 GRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
G + P L+ P P LEG++S + + CL++
Sbjct: 220 GEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNK 262
Query: 422 DPKARPLMSEVVE 434
+P RP E+++
Sbjct: 263 EPSFRPTAKELLK 275
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 67
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 68 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 127 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 158
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 159 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 150
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++D + ++ E++ GS + L PL + I KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ I+RD K +N+LL +G+ KL+DFG+A G
Sbjct: 124 KK---IHRDIKAANVLLS-----EHGE--------------------VKLADFGVA--GQ 153
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
D +GT + APE + S++D++S G+ +E+ G + P
Sbjct: 154 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 213
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
L+ P P LEG++S + + CL+++P RP E+++
Sbjct: 214 FLIPKNNP-------------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 42/242 (17%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL---NHDGLQGHKE 181
K+ ++ LG GG V ++ E+ +K VA+K + + + K
Sbjct: 7 KIINERYKIVDKLGGGGMSTV---YLAEDTILNIK------VAIKAIFIPPREKEETLKR 57
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
+ EV+ L H N+V +I EDD LV E++ +L ++ PL +
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINF 116
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
G+ H+ +++RD K NIL+D+ N L
Sbjct: 117 TNQILDGIKHAHD---MRIVHRDIKPQNILIDS-------------------NKTL---- 150
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K+ DFG+AK E T + V+GT Y +PE +D+YS G+VL EML
Sbjct: 151 --KIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV 207
Query: 362 GR 363
G
Sbjct: 208 GE 209
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 8 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 56
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 148 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 69
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L++ + MP G L +++ + + +
Sbjct: 70 DEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 129 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 160
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 161 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+
Sbjct: 143 -IKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
T R
Sbjct: 200 TRR 202
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +L G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 65
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 125 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 156
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 157 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+K L + +KE L
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEIL 72
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 73 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 132 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 163
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFG AK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 164 KITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 11 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 59
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 150
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 151 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 37/238 (15%)
Query: 126 LATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWL 183
L F+ +LG G FG V+KG WI E + VA+ L + +KE L
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIMELREATSPKANKEIL 99
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + + ++ +L+G C+ +L+ + MP G L +++ + + +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
AKG+ +L + R +++RD N+L+ + +
Sbjct: 159 QIAKGMNYLED---RRLVHRDLAARNVLVKTPQ-------------------------HV 190
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
K++DFGLAK +K + + + A E ++ T +SDV+S+GV + E++T
Sbjct: 191 KITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
+ND+K + ++GEG FG V K I+ K G + A+K + +
Sbjct: 19 LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 64
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
H+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 123
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
IA A L+ LH A D R +Y I+ L
Sbjct: 124 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRNLAA 167
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
N+L ++Y AK++DFGL++ G + +V + MG + A E + T+ SDV+
Sbjct: 168 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 222
Query: 351 SFGVVLLEMLT 361
S+GV+L E+++
Sbjct: 223 SYGVLLWEIVS 233
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
T R
Sbjct: 199 TRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
T R
Sbjct: 201 TRR 203
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V+K +E TG A K + + ++++ E+ L H
Sbjct: 27 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS-- 135
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ +I+RD K N+L+ + + +L+DFG++ +
Sbjct: 136 -KRIIHRDLKAGNVLMTL-------------------------EGDIRLADFGVSAKNLK 169
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEM 359
+ S +GT + APE VM + ++D++S G+ L+EM
Sbjct: 170 TLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
T R
Sbjct: 199 TRR 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
+ND+K + ++GEG FG V K I+ K G + A+K + +
Sbjct: 22 LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 67
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
H+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 126
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
IA A L+ LH A D R +Y I+ L
Sbjct: 127 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRDLAA 170
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
N+L ++Y AK++DFGL++ G + +V + MG + A E + T+ SDV+
Sbjct: 171 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 225
Query: 351 SFGVVLLEMLT 361
S+GV+L E+++
Sbjct: 226 SYGVLLWEIVS 236
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
T R
Sbjct: 201 TRR 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 44/251 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQ 177
+ND+K + ++GEG FG V K I+ K G + A+K + +
Sbjct: 12 LDWNDIKF-------QDVIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKD 57
Query: 178 GHKEWLAEVNFLGDLVHL-NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
H+++ E+ L L H N++ L+G C L E+ P G+L + L R+S L
Sbjct: 58 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETD 116
Query: 237 IRMKIALGAAKGLA---FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
IA A L+ LH A D R +Y I+ L
Sbjct: 117 PAFAIANSTASTLSSQQLLHFAA----------------DVARGMDYLSQKQFIHRDLAA 160
Query: 294 NNMLF-QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEYVMTGHLTSRSDVY 350
N+L ++Y AK++DFGL++ G + +V + MG + A E + T+ SDV+
Sbjct: 161 RNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVW 215
Query: 351 SFGVVLLEMLT 361
S+GV+L E+++
Sbjct: 216 SYGVLLWEIVS 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 56/260 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG-- 178
++ L+ F E LGE FG V+KG + G AP + VA+KTL D +G
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHL--FGPAPGEQTQA--VAIKTLK-DKAEGPL 55
Query: 179 HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS-------- 230
+E+ E L H N+V L+G +D +++ + G L L RS
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 231 ---------LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
L P + + + A G+ +L + V+++D T N+L
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAA--GMEYL---SSHHVVHKDLATRNVL---------- 160
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 341
++ N K+SD GL ++ D + + + APE +M G
Sbjct: 161 ---------------VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG 205
Query: 342 HLTSRSDVYSFGVVLLEMLT 361
+ SD++S+GVVL E+ +
Sbjct: 206 KFSIDSDIWSYGVVLWEVFS 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 108/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L++ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
T R
Sbjct: 199 TRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
T R
Sbjct: 199 TRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
T R
Sbjct: 201 TRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 49
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 108
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 109 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 141
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 142 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
Query: 361 TGR 363
T R
Sbjct: 199 TRR 201
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 117/308 (37%), Gaps = 60/308 (19%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL--QGHKEWLA-EV 186
+F+ +LLG+G F V++ TGL VA+K ++ + G + + EV
Sbjct: 12 DFKVGNLLGKGSFAGVYRAE---------SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEV 62
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAA 246
L H ++++L Y + + LV E G + +L R P +
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
G+ +LH +++RD SN+LL ++ N K++
Sbjct: 123 TGMLYLHSHG---ILHRDLTLSNLLLT-------------------------RNMNIKIA 154
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
DFGLA + H + + GT Y +PE SDV+S G + +L GR
Sbjct: 155 DFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
D + N V A D + SI+ QL L R+P R
Sbjct: 213 DTDTVKNTLNKVVLA--------------DYEMPSFLSIEAKDLIHQL----LRRNPADR 254
Query: 427 PLMSEVVE 434
+S V++
Sbjct: 255 LSLSSVLD 262
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 53
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 112
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 113 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 145
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 146 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
Query: 361 TGR 363
T R
Sbjct: 203 TRR 205
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P +T + GT Y PE + + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 51
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 110
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 111 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 143
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 144 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
Query: 361 TGR 363
T R
Sbjct: 201 TRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
T R
Sbjct: 200 TRR 202
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 4 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 52
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GL+F H V++RD K N+L++ A K
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 144 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 143 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
T R
Sbjct: 200 TRR 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 96/228 (42%), Gaps = 44/228 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G FG V+K +E TG A K + + ++++ E+ L H
Sbjct: 19 LGDGAFGKVYKAKNKE---------TGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS-- 127
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ +I+RD K N+L+ + + +L+DFG++ +
Sbjct: 128 -KRIIHRDLKAGNVLMTL-------------------------EGDIRLADFGVSAKNLK 161
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTS-----RSDVYSFGVVLLEM 359
+ S +GT + APE VM + ++D++S G+ L+EM
Sbjct: 162 TLQKRDS--FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 5 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 53
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 144
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 145 LADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 50
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+EF+ L+ + +L +P +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSY 109
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 110 LFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGA------------------------ 142
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 143 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
Query: 361 TGR 363
T R
Sbjct: 200 TRR 202
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LG G FG V +G + VA+K L + +E + E + L +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E
Sbjct: 71 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ ++RD N+LL + AK+SDFGL+K
Sbjct: 129 --KNFVHRDLAARNVLL-------------------------VNRHYAKISDFGLSK-AL 160
Query: 316 EGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D ++ + R G + + APE + +SRSDV+S+GV + E L+
Sbjct: 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 116/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 54
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 114 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 144
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T + GT Y APE + D + GVV+ EM+
Sbjct: 145 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 202
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
GR N +H L E L E RF R + P +A L A L
Sbjct: 203 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 243
Query: 420 SRDPKAR 426
+DPK R
Sbjct: 244 KKDPKQR 250
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
+R A GL +H R V+YRD K +NILLD +G
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
+ ++SD GLA D + K H S +GT+GY APE + G S +D +S
Sbjct: 330 --------HVRISDLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
G +L ++L G +++ +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 230
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 231 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 289
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
+R A GL +H R V+YRD K +NILLD +G
Sbjct: 290 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 328
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
+ ++SD GLA D + K H S +GT+GY APE + G S +D +S
Sbjct: 329 --------HVRISDLGLACDFSK-KKPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 376
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
G +L ++L G +++ +H +
Sbjct: 377 GCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+A H+ +++RD K N+LLD + N K
Sbjct: 124 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 153
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
++DFGL+ +G+ S G+ YAAPE V++G L + DV+S GV+L ML
Sbjct: 154 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
R D KN NG + L ++ P
Sbjct: 210 RLPFDDESIPVLFKNISNGVYTLPKFLSP 238
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 62 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+I+RD K NILL GL KL DFG A
Sbjct: 172 SHN---MIHRDVKAGNILLSEP--------------GL-----------VKLGDFGSASI 203
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
+ +GT + APE ++ G + DV+S G+ +E+
Sbjct: 204 MAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
+R A GL +H R V+YRD K +NILLD +G
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
+ ++SD GLA D + K H S +GT+GY APE + G S +D +S
Sbjct: 330 --------HVRISDLGLACDFSKK-KPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
G +L ++L G +++ +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
++ L +F ++G GGFG V+ K TG A+K L+ ++ +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ-- 231
Query: 183 LAEVNFLGDLVHLNLVK--------LIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPL 233
E L + + L+LV + Y +L + + M G L HL + +
Sbjct: 232 -GETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS 290
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
+R A GL +H R V+YRD K +NILLD +G
Sbjct: 291 EADMRF-YAAEIILGLEHMHN---RFVVYRDLKPANILLD-----EHG------------ 329
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
+ ++SD GLA D + K H S +GT+GY APE + G S +D +S
Sbjct: 330 --------HVRISDLGLACDFSKK-KPHAS---VGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNL 377
G +L ++L G +++ +H +
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 53
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+A H+ +++RD K N+LLD + N K
Sbjct: 114 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 143
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
++DFGL+ +G+ S G+ YAAPE V++G L + DV+S GV+L ML
Sbjct: 144 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
R D KN NG + L ++ P
Sbjct: 200 RLPFDDESIPVLFKNISNGVYTLPKFLSP 228
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+R +IYRD K N+LLD D N ++SD GLA +
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
G + GT G+ APE ++ D ++ GV L EM+ R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 113/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T + GT Y APE + D + GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L A L
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
+DPK R
Sbjct: 242 KDPKQR 247
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+R +IYRD K N+LLD D N ++SD GLA +
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
G + GT G+ APE ++ D ++ GV L EM+ R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 361 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 414
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 415 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 471
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 472 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 503
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 504 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 561
Query: 356 LLEMLT 361
+ E +
Sbjct: 562 MWEAFS 567
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+R +IYRD K N+LLD D N ++SD GLA +
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
G + GT G+ APE ++ D ++ GV L EM+ R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
NF+ +GEG +G V+K + G L + + ++ E++ L
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 56
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKG 248
+L H N+VKL+ +++ LV+EF+ L+ + +L +P + +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
LAF H V++RD K N+L++ A KL+DF
Sbjct: 116 LAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IKLADF 147
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
GLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 148 GLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
NF+ +GEG +G V+K + G L + + ++ E++ L
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLL 55
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALGAAKG 248
+L H N+VKL+ +++ LV+EF+ L+ + +L +P + +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
LAF H V++RD K N+L++ A KL+DF
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IKLADF 146
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
GLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 147 GLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 128/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ ++ + +
Sbjct: 14 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
L + S I A L++ H + VI+RD K N+LL G
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 170
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
G K++DFG + P +T + GT Y PE +
Sbjct: 171 G-----------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 209
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
+ D++S GV+ E L G+ + N + Y+ I R+E F
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 251
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 40/239 (16%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
+L +F S LG G G V K +G + L + N + +
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--------QIIR 63
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+ L + +V G D + + E M GSL + + + + +P I K+++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGKVSIA 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLA+L E+ + +++RD K SNIL+++ R E K
Sbjct: 123 VLRGLAYLREKHQ--IMHRDVKPSNILVNS-RGE------------------------IK 155
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
L DFG++ + ++ +GT Y APE + H + +SD++S G+ L+E+ GR
Sbjct: 156 LCDFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 62
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+A H+ +++RD K N+LLD + N K
Sbjct: 123 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 152
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
++DFGL+ +G+ S G+ YAAPE V++G L + DV+S GV+L ML
Sbjct: 153 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
R D KN NG + L ++ P
Sbjct: 209 RLPFDDESIPVLFKNISNGVYTLPKFLSP 237
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 86/229 (37%), Gaps = 35/229 (15%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG GGFG VF ++ G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 196 NLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
+ + Y E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+R +IYRD K N+LLD D N ++SD GLA +
Sbjct: 305 LHQRNIIYRDLKPENVLLD-------------------------DDGNVRISDLGLAVEL 339
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
G + GT G+ APE ++ D ++ GV L EM+ R
Sbjct: 340 KAGQTK--TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 113/308 (36%), Gaps = 63/308 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
D K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEV 54
Query: 183 ---LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 AHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
A L +LH R V+YRD K N++LD
Sbjct: 114 FYGA-EIVSALEYLHS---RDVVYRDIKLENLMLD------------------------- 144
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+D + K++DFGL K+G T GT Y APE + D + GVV+ E
Sbjct: 145 KDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 202
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
M+ GR L+ L E RF R + P +A L A
Sbjct: 203 MMCGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGL 244
Query: 419 LSRDPKAR 426
L +DPK R
Sbjct: 245 LKKDPKQR 252
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 362 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 415
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 416 --DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 472
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 473 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 504
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 505 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 562
Query: 356 LLEMLT 361
+ E +
Sbjct: 563 MWEAFS 568
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 60/269 (22%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL-----QGHKEWLA 184
N++ LGEG FG V + TG VA+K +N L QG E
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--R 57
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
E+++L L H +++KL D+ ++V E+ + + R + + R +
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+A H+ +++RD K N+LLD + N K
Sbjct: 118 SAVEYCHRHK-----IVHRDLKPENLLLD-------------------------EHLNVK 147
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTG 362
++DFGL+ +G+ S G+ YAAPE V++G L + DV+S GV+L ML
Sbjct: 148 IADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 363 RRSMD--------KNRPNGEHNLVEWARP 383
R D KN NG + L ++ P
Sbjct: 204 RLPFDDESIPVLFKNISNGVYTLPKFLSP 232
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 113/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T + GT Y APE + D + GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L A L
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
+DPK R
Sbjct: 242 KDPKQR 247
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 176
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
RD K N+LLD+ + + KL+D+G+ K+G GD T
Sbjct: 177 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 210
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
+ GT Y APE + D ++ GV++ EM+ GR D + N + N +
Sbjct: 211 --STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 268
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
+ + E++ R+ S+ KAA + L++DPK R
Sbjct: 269 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 304
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 130 NFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
RPE +LG+GG+G VF+ + + A + V K + + A
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E N L ++ H +V LI Y + +L L+ E++ G L L R + + + +A
Sbjct: 71 ERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ L LH++ +IYRD K NI+L+ +
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLN-------------------------HQGHV 160
Query: 304 KLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL+DFGL K+ +G TH GT Y APE +M D +S G ++ +MLTG
Sbjct: 161 KLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQLAAHCLS 420
A P GE R+ + ID L+ ++ Q+A L L
Sbjct: 218 ------------------APPFTGENRK--KTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 421 RDPKAR 426
R+ +R
Sbjct: 258 RNAASR 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 129
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
RD K N+LLD+ + + KL+D+G+ K+G GD T
Sbjct: 130 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 163
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
+ GT Y APE + D ++ GV++ EM+ GR D + N + N +
Sbjct: 164 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 221
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
+ + E++ R+ S+ KAA + L++DPK R
Sbjct: 222 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 133
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
RD K N+LLD+ + + KL+D+G+ K+G GD T
Sbjct: 134 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 167
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
+ GT Y APE + D ++ GV++ EM+ GR D + N + N +
Sbjct: 168 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 225
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
+ + E++ R+ S+ KAA + L++DPK R
Sbjct: 226 YLFQVILEKQ-------IRIPRSLSV----KAASVLKSFLNKDPKER 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 50/229 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G G FG V+ N VA+K +++ G Q +++W + EV FL L
Sbjct: 23 IGHGSFGAVYFARDVRNSE---------VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N ++ G + + LV E+ GS + L PL + GA +GLA+LH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+I+RD K NILL GL KL DFG A
Sbjct: 133 SHN---MIHRDVKAGNILLSEP--------------GL-----------VKLGDFGSASI 164
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMT---GHLTSRSDVYSFGVVLLEM 359
+ +GT + APE ++ G + DV+S G+ +E+
Sbjct: 165 MAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T GT Y APE + D + GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
GR N +H L E L E RF R + P +A L A L
Sbjct: 200 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 240
Query: 420 SRDPKAR 426
+DPK R
Sbjct: 241 KKDPKQR 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T GT Y APE + D + GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHN-LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
GR N +H L E L E RF R + P +A L A L
Sbjct: 200 CGRLPF----YNQDHERLFELI---LMEEIRFPRTLSP------------EAKSLLAGLL 240
Query: 420 SRDPKAR 426
+DPK R
Sbjct: 241 KKDPKQR 247
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLVHL 195
LG G FG V +G + VA+K L + +E + E + L +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E
Sbjct: 397 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 454
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ ++R+ N+LL + AK+SDFGL+K
Sbjct: 455 --KNFVHRNLAARNVLL-------------------------VNRHYAKISDFGLSK-AL 486
Query: 316 EGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D ++ + R G + + APE + +SRSDV+S+GV + E L+
Sbjct: 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 116/308 (37%), Gaps = 62/308 (20%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE- 181
D ++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEV 54
Query: 182 --WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIR 238
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 AHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 113
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
A L +LH +E+ V+YRD K N++LD
Sbjct: 114 FYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLD------------------------- 145
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLE 358
+D + K++DFGL K+G + T GT Y APE + D + GVV+ E
Sbjct: 146 KDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 203
Query: 359 MLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHC 418
M+ GR L+ L E RF R + P +A L +
Sbjct: 204 MMCGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGL 245
Query: 419 LSRDPKAR 426
L +DPK R
Sbjct: 246 LKKDPKQR 253
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 47/227 (20%)
Query: 204 CIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIY 262
C + + RL V E++ G L H+ +R LP + + L +LHE R +IY
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLHE---RGIIY 144
Query: 263 RDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE-GDKTH 321
RD K N+LLD+ + + KL+D+G+ K+G GD T
Sbjct: 145 RDLKLDNVLLDS-------------------------EGHIKLTDYGMCKEGLRPGDTT- 178
Query: 322 VSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVE 379
+ GT Y APE + D ++ GV++ EM+ GR D + N + N +
Sbjct: 179 --SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED 236
Query: 380 WARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
+ + E++ R+ S+ KAA + L++DPK R
Sbjct: 237 YLFQVILEKQ-------IRIPRSMSV----KAASVLKSFLNKDPKER 272
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 123/306 (40%), Gaps = 64/306 (20%)
Query: 130 NFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA 184
RPE +LG+GG+G VF+ + + A + V K + + A
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA 70
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E N L ++ H +V LI Y + +L L+ E++ G L L R + + + +A
Sbjct: 71 ERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
+ L LH++ +IYRD K NI+L+ +
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLN-------------------------HQGHV 160
Query: 304 KLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
KL+DFGL K+ +G TH GT Y APE +M D +S G ++ +MLTG
Sbjct: 161 KLTDFGLCKESIHDGTVTHX---FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG--AQKAAQLAAHCLS 420
A P GE R+ + ID L+ ++ Q+A L L
Sbjct: 218 ------------------APPFTGENRK--KTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 421 RDPKAR 426
R+ +R
Sbjct: 258 RNAASR 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 159 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALS 261
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 262 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 293
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 294 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 348 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 392
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 393 ATAAELLK 400
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 127/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ + + +
Sbjct: 5 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLA---------REKQSKFIL 53
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 54 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 113
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
L + S I A L++ H + VI+RD K N+LL G
Sbjct: 114 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 161
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
G K++DFG + P +T + GT Y PE +
Sbjct: 162 G-----------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMH 200
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
+ D++S GV+ E L G+ + N + Y+ I R+E F
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 242
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 243 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 66/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGDL 192
+GEG +G V+K K G VA+K + D G+ + E++ L +L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAF 251
H N+V LI + LV+EFM + L+ L L S ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
H+ +++RD K N+L+++ D KL+DFGLA
Sbjct: 135 CHQHR---ILHRDLKPQNLLINS-------------------------DGALKLADFGLA 166
Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR-----RS 365
+ G T + T Y AP+ +M S S D++S G + EM+TG+ +
Sbjct: 167 R--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 366 MDKNRPN-----GEHNLVEWARPHLGE----RRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
D P G N EW P + E ++R +++ + + Q+ L +
Sbjct: 225 DDDQLPKIFSILGTPNPREW--PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 417 HCLSRDPKAR 426
+ L DP R
Sbjct: 283 NMLCFDPNKR 292
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 108/249 (43%), Gaps = 64/249 (25%)
Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGD--LVHLNL 197
G FGCV+K + + VAVK LQ + W +E + H NL
Sbjct: 26 GRFGCVWKAQLMND-----------FVAVKIFP---LQDKQSWQSEREIFSTPGMKHENL 71
Query: 198 VKLI-----GYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
++ I G +E + L+ F +GSL ++L + + W+ +A ++GL++L
Sbjct: 72 LQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYL 128
Query: 253 HE-------EAERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
HE E +P I +RDFK+ N+LL + D A
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKS-------------------------DLTAV 163
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT------SRSDVYSFGVVLLE 358
L+DFGLA G + +GT Y APE V+ G + R D+Y+ G+VL E
Sbjct: 164 LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWE 222
Query: 359 MLTGRRSMD 367
+++ ++ D
Sbjct: 223 LVSRCKAAD 231
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 123/324 (37%), Gaps = 69/324 (21%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
E E+ +A + T N+ F LLG+G FG V ++E T G
Sbjct: 133 EMEVSLAKPKHRVTMNE-------FEYLKLLGKGTFGKVI--LVKEKAT-------GRYY 176
Query: 167 AVKTLNHDGLQGHKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSL 222
A+K L + + E L E L + H L L Y + RL V E+ G L
Sbjct: 177 AMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL 235
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
HL R + R A L +LH +E+ V+YRD K N++LD
Sbjct: 236 FFHLSRERVFSEDRARFYGA-EIVSALDYLH--SEKNVVYRDLKLENLMLD--------- 283
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
+D + K++DFGL K+G + T + GT Y APE +
Sbjct: 284 ----------------KDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDND 325
Query: 343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGH 402
D + GVV+ EM+ GR L+ L E RF R + P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP----- 374
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+A L + L +DPK R
Sbjct: 375 -------EAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 116/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 197
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 198 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH +E+ V+YRD K N++LD +D
Sbjct: 257 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 288
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G + T + GT Y APE + D + GVV+ EM+
Sbjct: 289 GHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L + L
Sbjct: 347 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 388
Query: 421 RDPKAR 426
+DPK R
Sbjct: 389 KDPKQR 394
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 123/326 (37%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ PRG + L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P + + GT Y PE + + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 130/319 (40%), Gaps = 84/319 (26%)
Query: 134 ESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-DGLQGHKEWLAEVNFLGDL 192
+ ++G+G FG V+ G + ++ A+K+L+ +Q + +L E + L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQ------CAIKSLSRITEMQQVEAFLREGLLMRGL 79
Query: 193 VHLNLVKLIGYCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG--AAK 247
H N++ LIG + + LL Y M G L F RS +++ I+ G A+
Sbjct: 80 NHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FIRSPQRNPTVKDLISFGLQVAR 135
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ +L AE+ ++RD N +LD + + K++D
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLD-------------------------ESFTVKVAD 167
Query: 308 FGLAKDGPEGD----KTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
FGLA+D + + + H R+ + A E + T T++SDV+SFGV+L E+LT
Sbjct: 168 FGLARDILDREYYSVQQHRHARL--PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT-- 223
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQ---------KAAQL 414
+ P YR IDP HF +G + Q+
Sbjct: 224 ----RGAPP-------------------YRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQV 260
Query: 415 AAHCLSRDPKARPLMSEVV 433
C DP RP +V
Sbjct: 261 MQQCWEADPAVRPTFRVLV 279
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 112/306 (36%), Gaps = 63/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
K+ +F LLG+G FG V + E T G A+K L + + E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVI--LVREKAT-------GRYYAMKILRKEVIIAKDEVAH 51
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 52 TVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH R V+YRD K N++LD +D
Sbjct: 111 GA-EIVSALEYLHS---RDVVYRDIKLENLMLD-------------------------KD 141
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G T GT Y APE + D + GVV+ EM+
Sbjct: 142 GHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L A L
Sbjct: 200 CGRLPFYNQDHERLFELI------LMEEIRFPRTLSP------------EAKSLLAGLLK 241
Query: 421 RDPKAR 426
+DPK R
Sbjct: 242 KDPKQR 247
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 66/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAEVNFLGDL 192
+GEG +G V+K K G VA+K + D G+ + E++ L +L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-GAAKGLAF 251
H N+V LI + LV+EFM + L+ L L S ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
H+ +++RD K N+L+++ D KL+DFGLA
Sbjct: 135 CHQHR---ILHRDLKPQNLLINS-------------------------DGALKLADFGLA 166
Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR-----RS 365
+ G T + T Y AP+ +M S S D++S G + EM+TG+ +
Sbjct: 167 R--AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
Query: 366 MDKNRPN-----GEHNLVEWARPHLGE----RRRFYRLIDPRLEGHFSIKGAQKAAQLAA 416
D P G N EW P + E ++R +++ + + Q+ L +
Sbjct: 225 DDDQLPKIFSILGTPNPREW--PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLS 282
Query: 417 HCLSRDPKAR 426
+ L DP R
Sbjct: 283 NMLCFDPNKR 292
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 19 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 72
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 73 D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 161
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 162 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 356 LLEMLT 361
+ E +
Sbjct: 220 MWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 19 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 72
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 73 D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 129
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 130 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 161
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 162 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 219
Query: 356 LLEMLT 361
+ E +
Sbjct: 220 MWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 17 KEVYLDRKLLTLE---DKELGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 70
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 71 D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 127
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 128 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 159
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 160 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 217
Query: 356 LLEMLT 361
+ E +
Sbjct: 218 MWEAFS 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 4 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 47
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 48 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 107
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 108 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 146
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T +S GT Y PE + + D++S G
Sbjct: 147 --------ELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 236
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 237 LISRLLKHNPSQRPMLREVLE 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 83/324 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+F+ L+G GGFG VFK +G T +K + ++ + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIKRVKYNNEKAERE----VKAL 58
Query: 190 GDLVHLNLVKLIG------YCIEDDQR----------LLVYEFMPRGSLENHL-FRRSLP 232
L H+N+V G Y E + + EF +G+LE + RR
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
L + +++ KG+ ++H + +I RD K SNI L + G FG
Sbjct: 119 LDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVT----- 170
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
L DG R GT Y +PE + + D+Y+
Sbjct: 171 ----------------SLKNDGKR-------XRSKGTLRYMSPEQISSQDYGKEVDLYAL 207
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L E+L ++ + A E +F+ D R +G S +K
Sbjct: 208 GLILAELL---------------HVCDTA----FETSKFF--TDLR-DGIISDIFDKKEK 245
Query: 413 QLAAHCLSRDPKARPLMSEVVEAL 436
L LS+ P+ RP SE++ L
Sbjct: 246 TLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 125/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 3 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVL 46
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 47 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 106
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 107 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P +T + GT Y PE + + D
Sbjct: 151 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 194 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 235
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 236 EGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 115/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 54
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 55 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 113
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH +E+ V+YRD K N++LD +D
Sbjct: 114 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 145
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G + T GT Y APE + D + GVV+ EM+
Sbjct: 146 GHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 203
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L + L
Sbjct: 204 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 245
Query: 421 RDPKAR 426
+DPK R
Sbjct: 246 KDPKQR 251
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEWLAE 185
NF+ +GEG +G V+K N TG VA+K + D G+ + E
Sbjct: 3 NFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA--IRE 51
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALG 244
++ L +L H N+VKL+ +++ LV+E + L+ + +L +P +
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+GLAF H V++RD K N+L++ A K
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGA-------------------------IK 142
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L+DFGLA+ G T + T Y APE ++ + ++ D++S G + EM+T R
Sbjct: 143 LADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 123/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 146
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K++DFG + P +T + GT Y PE + + D++
Sbjct: 147 -----------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLW 191
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + + R+E F +
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 233
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP++ EV+E
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P +T + GT Y PE + + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 82 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 184
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 185 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 216
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 217 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 271 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 315
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 316 ATAAELLK 323
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 119/299 (39%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG VFKG +N T V VA+K ++ + ++ E+ L
Sbjct: 31 IGKGSFGEVFKGI--DNRTQQV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ K G ++ + ++ E++ GS + L R+ P + KGL +LH E
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLHSE 139
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ I+RD K +N+LL + + KL+DFG+A G
Sbjct: 140 KK---IHRDIKAANVLLS-------------------------EQGDVKLADFGVA--GQ 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
D +GT + APE + S++D++S G+ +E+ G P
Sbjct: 170 LTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL 229
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
L+ P P L G F+ + + CL++DP RP E+++
Sbjct: 230 FLIPKNNP-------------PTLVGDFT----KSFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 115/306 (37%), Gaps = 62/306 (20%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE--- 181
++ F LLG+G FG V ++E T G A+K L + + E
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVI--LVKEKAT-------GRYYAMKILKKEVIVAKDEVAH 55
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L E L + H L L Y + RL V E+ G L HL R + R
Sbjct: 56 TLTENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 114
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L +LH +E+ V+YRD K N++LD +D
Sbjct: 115 GA-EIVSALDYLH--SEKNVVYRDLKLENLMLD-------------------------KD 146
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ K++DFGL K+G + T GT Y APE + D + GVV+ EM+
Sbjct: 147 GHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
Query: 361 TGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLS 420
GR L+ L E RF R + P +A L + L
Sbjct: 205 CGRLPFYNQDHEKLFELI------LMEEIRFPRTLGP------------EAKSLLSGLLK 246
Query: 421 RDPKAR 426
+DPK R
Sbjct: 247 KDPKQR 252
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 120/299 (40%), Gaps = 59/299 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEVNFLGDLVHL 195
+G+G FG V+KG +N T V VA+K ++ + ++ E+ L
Sbjct: 27 IGKGSFGEVYKGI--DNHTKEV-------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ + G ++ + ++ E++ GS + L + PL + I KGL +LH E
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE 135
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ I+RD K +N+LL + + KL+DFG+A G
Sbjct: 136 RK---IHRDIKAANVLLS-------------------------EQGDVKLADFGVA--GQ 165
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 375
D +GT + APE + ++D++S G+ +E+ G P
Sbjct: 166 LTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL 225
Query: 376 NLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
L+ P P LEG S + + CL++DP+ RP E+++
Sbjct: 226 FLIPKNSP-------------PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 124/324 (38%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ ++ + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 150
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K++DFG + P +T + GT Y PE + + D++
Sbjct: 151 -----------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLW 195
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + + R+E F +
Sbjct: 196 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 237
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP++ EV+E
Sbjct: 238 ARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 96/242 (39%), Gaps = 44/242 (18%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW-- 182
+L NF +LG+G FG V ++E TG AVK L D + +
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE---------TGDLYAVKVLKKDVILQDDDVEC 69
Query: 183 -LAEVNFLGDLVHLNLVKLIGYCIEDDQRLL-VYEFMPRGSLENHLFRRSLPLPWSIRMK 240
+ E L + + + C + RL V EF+ G L H+ ++S +
Sbjct: 70 TMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARF 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
A L FLH++ +IYRD K N+LLD +
Sbjct: 129 YAAEIISALMFLHDKG---IIYRDLKLDNVLLD-------------------------HE 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
+ KL+DFG+ K+G T + GT Y APE + D ++ GV+L EML
Sbjct: 161 GHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 361 TG 362
G
Sbjct: 219 CG 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 41/246 (16%)
Query: 118 KFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
K + D KL T + LG G FG V KG+ + V + + N L+
Sbjct: 9 KEVYLDRKLLTLEDKE---LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK 62
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
E LAE N + L + +V++IG C E + +LV E G L +L + +I
Sbjct: 63 D--ELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI 119
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
+++ + G+ +L E ++RD N+LL +
Sbjct: 120 -IELVHQVSMGMKYLEESN---FVHRDLAARNVLL------------------------V 151
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVV 355
Q Y AK+SDFGL+K D+ + + G + + APE + +S+SDV+SFGV+
Sbjct: 152 TQHY-AKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL 209
Query: 356 LLEMLT 361
+ E +
Sbjct: 210 MWEAFS 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N+L NA K+ DFG+A+ G+ + V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
GT Y +PE + +RSDVYS G VL E+LTG + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++RD N+LL + Q Y AK+SDFGL+K
Sbjct: 132 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 162
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D+ + + G + + APE + +S+SDV+SFGV++ E +
Sbjct: 163 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 13 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 67
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 125
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++RD N+LL + Q Y AK+SDFGL+K
Sbjct: 126 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 156
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D+ + + G + + APE + +S+SDV+SFGV++ E +
Sbjct: 157 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P +T + GT Y PE + + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 124/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + Y+ I R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 39 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 141
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 142 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 173
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 174 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 228 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 272
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 273 ATAAELLK 280
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 37 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 139
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 140 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 171
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 172 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 226 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 270
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 271 ATAAELLK 278
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 15 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPY 69
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 127
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++RD N+LL + Q Y AK+SDFGL+K
Sbjct: 128 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 158
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D+ + + G + + APE + +S+SDV+SFGV++ E +
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 28 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 130
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 131 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 162
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 163 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 217 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 261
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 262 ATAAELLK 269
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 63/257 (24%)
Query: 140 GGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE--VNFLGDLVHLNL 197
G FGCV+K + VAVK +Q + W E V L + H N+
Sbjct: 35 GRFGCVWKAQLLNE-----------YVAVKIFP---IQDKQSWQNEYEVYSLPGMKHENI 80
Query: 198 VKLIGY----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
++ IG D L+ F +GSL + F ++ + W+ IA A+GLA+LH
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLH 138
Query: 254 EE------AERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
E+ +P I +RD K+ N+LL NN+ A ++
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLK--------------------NNL-----TACIA 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLT------SRSDVYSFGVVLLEML 360
DFGLA G + +GT Y APE V+ G + R D+Y+ G+VL E+
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELA 232
Query: 361 TGRRSMDKNRPNGEHNL 377
+ R + P E+ L
Sbjct: 233 S--RCTAADGPVDEYML 247
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 107/243 (44%), Gaps = 48/243 (19%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD----GLQGHKEW 182
+ NF+ +GEG +G V+K N TG VA+K + D G+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKA---RNKL------TGEVVALKKIRLDTETEGVPSTA-- 52
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKI 241
+ E++ L +L H N+VKL+ +++ LV+E + + L+ + +L +P +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSY 111
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GLAF H V++RD K N+L++ A
Sbjct: 112 LFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGA------------------------ 144
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
KL+DFGLA+ +T+ V T Y APE ++ + ++ D++S G + EM+
Sbjct: 145 -IKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
Query: 361 TGR 363
T R
Sbjct: 202 TRR 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N++ NA K+ DFG+A+ G+ + V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
GT Y +PE + +RSDVYS G VL E+LTG + P+
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 132/334 (39%), Gaps = 66/334 (19%)
Query: 108 EELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVA 167
+ L ++ L++ D+ + + F +LG+G FG V + +++ + G+ + VA
Sbjct: 3 DSLGISDELKE-KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQ------EDGSFVKVA 55
Query: 168 VKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQR------LLVYEFMPR 219
VK L D + +E+L E + + H ++ KL+G + + +++ FM
Sbjct: 56 VKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 220 GSLENHLFRRSL-----PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
G L L + LP ++ + A G+ +L + R I+RD N
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNC---- 168
Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 334
ML +D ++DFGL++ GD + A
Sbjct: 169 ---------------------MLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 335 PEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGE-HNLVEWARPHLGERRRFYR 393
E + T SDV++FGV + E++T ++ N E +N + +G R
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYL------IGGN----R 257
Query: 394 LIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
L P + ++ L C S DPK RP
Sbjct: 258 LKQPP-------ECMEEVYDLMYQCWSADPKQRP 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 127/331 (38%), Gaps = 65/331 (19%)
Query: 107 EEELKVASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTV 166
EEEL AS+ + + A +F LG+G FG V+ ++ + +
Sbjct: 14 EEEL--ASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQ---------SKFIL 62
Query: 167 AVKTLNHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLE 223
A+K L L+ + EV L H N+++L GY + + L+ E+ P G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 224 NHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKF 283
L + S I A L++ H + VI+RD K N+LL G
Sbjct: 123 RELQKLSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSA 170
Query: 284 GFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHL 343
G K++DFG + P + + GT Y PE +
Sbjct: 171 G-----------------ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH 209
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
+ D++S GV+ E L G+ + N + Y+ I R+E F
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTF 251
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 118/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES-- 138
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 139 -KQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 172
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
++T S ++ PE +M +S+SD+++FGV++ E+ + + + N E
Sbjct: 173 DEETS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 229
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
H+ + R YR P L ++K + C RP L+S +
Sbjct: 230 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 275
Query: 433 VEAL 436
++ +
Sbjct: 276 LDVM 279
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + +G VAVK ++ Q + EV + D H N
Sbjct: 32 IGEGSTGIVCIATVRSSGK---------LVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 134
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG- 309
LH + VI+RD K+ +ILL D KLSDFG
Sbjct: 135 VLHAQG---VIHRDIKSDSILLT-------------------------HDGRVKLSDFGF 166
Query: 310 ---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
++K+ P ++GT + APE + D++S G++++EM+ G
Sbjct: 167 CAQVSKEVPR------RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
P ++ R +L R + + P L+G L RDP R
Sbjct: 221 FNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLD------------RLLVRDPAQR 265
Query: 427 PLMSEVVE 434
+E+++
Sbjct: 266 ATAAELLK 273
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 124/324 (38%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 5 SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 48
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 49 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 108
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 109 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 150
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K++DFG + P +T + GT Y PE + + D++
Sbjct: 151 -----------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEXIEGRXHDEKVDLW 195
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + Y+ I R+E F +
Sbjct: 196 SLGVLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEG 237
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP + EV+E
Sbjct: 238 ARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW 182
D+K + + LGEG F V+K + T + + + ++ DG+ ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGI--NRTA 59
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
L E+ L +L H N++ L+ LV++FM LE + SL L S
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYM 118
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
L +GL +LH+ +++RD K +N+LLD N +L
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDE-------------------NGVL----- 151
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEML 360
KL+DFGLAK ++ + V T Y APE + + D+++ G +L E+L
Sbjct: 152 -KLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+GEG G V + TG VAVK ++ Q + EV + D H N
Sbjct: 53 IGEGSTGIV---------CIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALGAAKGLA 250
+V + + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIATVCLSVLRALS 155
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH + VI+RD K+ +ILL + FGFC A++S
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFC----------------AQVS---- 192
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
K+ P+ ++GT + APE + + D++S G++++EM+ G
Sbjct: 193 -KEVPK------RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ A C+ KL DFGL++
Sbjct: 509 SKR-FVHRDIAARNVLVSATD---------CV----------------KLGDFGLSR-YM 541
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 596
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 644
Query: 435 ALKPL 439
L +
Sbjct: 645 QLSTI 649
Score = 28.9 bits (63), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 2 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 45
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 105
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 106 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 144
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 145 --------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 193 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 234
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 235 LISRLLKHNPSQRPMLREVLE 255
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N++ NA K+ DFG+A+ G+ + V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
GT Y +PE + +RSDVYS G VL E+LTG + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V KG+ + V + + N L+ E LAE N + L +
Sbjct: 19 LGSGNFGTVKKGYYQ---MKKVVKTVAVKILKNEANDPALK--DELLAEANVMQQLDNPY 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 131
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++RD N+LL + Q Y AK+SDFGL+K
Sbjct: 132 ---FVHRDLAARNVLL------------------------VTQHY-AKISDFGLSK-ALR 162
Query: 317 GDKTHVSTRVMGTY--GYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
D+ + G + + APE + +S+SDV+SFGV++ E +
Sbjct: 163 ADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N++ NA K+ DFG+A+ G+ + V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
GT Y +PE + +RSDVYS G VL E+LTG + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N++ NA K+ DFG+A+ G+ + V+
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 180
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
GT Y +PE + +RSDVYS G VL E+LTG + P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 121/315 (38%), Gaps = 58/315 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLV 193
L+GEG +G V K ++ TG VA+K + D K + E+ L L
Sbjct: 32 LVGEGSYGMVMKCRNKD---------TGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H NLV L+ C + + LV+EF+ L++ LF L + + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFC 140
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +I+RD K NIL+ Q KL DFG A+
Sbjct: 141 HSHN---IIHRDIKPENILVS-------------------------QSGVVKLCDFGFAR 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM--DKN 369
V + T Y APE ++ ++ DV++ G ++ EM G D +
Sbjct: 173 --TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 370 RPNGEH------NLVEWARPHLGERRRFYRLIDPRLEGHFSI-----KGAQKAAQLAAHC 418
H NL+ + + F + P ++ + K ++ LA C
Sbjct: 231 IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKC 290
Query: 419 LSRDPKARPLMSEVV 433
L DP RP +E++
Sbjct: 291 LHIDPDKRPFCAELL 305
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 126/338 (37%), Gaps = 98/338 (28%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+F+ L+G GGFG VFK +G T ++ + ++ + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGK---------TYVIRRVKYNNEKAERE----VKAL 59
Query: 190 GDLVHLNLVKLIGYCIE---------DDQR---------------------LLVYEFMPR 219
L H+N+V G C + DD + EF +
Sbjct: 60 AKLDHVNIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 220 GSLENHL-FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
G+LE + RR L + +++ KG+ ++H + +I+RD K SNI L +
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQV 175
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
G FG L DG TR GT Y +PE +
Sbjct: 176 KIGDFGLVT---------------------SLKNDGKR-------TRSKGTLRYMSPEQI 207
Query: 339 MTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPR 398
+ D+Y+ G++L E+L ++ + A E +F+ D R
Sbjct: 208 SSQDYGKEVDLYALGLILAELL---------------HVCDTA----FETSKFF--TDLR 246
Query: 399 LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEAL 436
+G S +K L LS+ P+ RP SE++ L
Sbjct: 247 -DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ E+N + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA-REKN--------SKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KKVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P + + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQDTYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 157
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
+ T S ++ PE +M +S+SD+++FGV++ E+ + + + N E
Sbjct: 158 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 214
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
H+ + R YR P L ++K + C RP L+S +
Sbjct: 215 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 260
Query: 433 VEAL 436
++ +
Sbjct: 261 LDVM 264
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 122/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 7 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 50
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 51 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 110
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 111 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 149
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P +T + GT Y PE + + D++S G
Sbjct: 150 --------ELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 198 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 239
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 240 LISRLLKHNPSQRPMLREVLE 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 122 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 156
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
+ T S ++ PE +M +S+SD+++FGV++ E+ + + + N E
Sbjct: 157 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 213
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
H+ + R YR P L ++K + C RP L+S +
Sbjct: 214 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 259
Query: 433 VEAL 436
++ +
Sbjct: 260 LDVM 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 147
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K++DFG + P + + GT Y PE + + D++
Sbjct: 148 -----------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLW 192
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + + R+E F +
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 234
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP++ EV+E
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 120/307 (39%), Gaps = 66/307 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++
Sbjct: 123 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVL- 156
Query: 317 GDKTHVSTRVMGT---YGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNG 373
D + S+R G+ ++ PE +M +S+SD+++FGV++ E+ + + + N
Sbjct: 157 -DDEYTSSR--GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 374 EHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LM 429
E H+ + R YR P L ++K + C RP L+
Sbjct: 214 E------TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILL 257
Query: 430 SEVVEAL 436
S +++ +
Sbjct: 258 SNILDVM 264
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 118 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 152
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK--NRPNG 373
+ T S ++ PE +M +S+SD+++FGV++ E+ + G+ ++ N
Sbjct: 153 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
Query: 374 EHNL--VEWARPHLGERRRF 391
EH + RPHL + +
Sbjct: 212 EHIAQGLRLYRPHLASEKVY 231
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 123/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 2 SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 45
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 46 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 105
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 106 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 147
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K+++FG + P +T + GT Y PE + + D++
Sbjct: 148 -----------ELKIANFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVDLW 192
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + + R+E F +
Sbjct: 193 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 234
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP++ EV+E
Sbjct: 235 ARDLISRLLKHNPSQRPMLREVLE 258
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 45/260 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 138 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 172
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT-GRRSMDK--NRPNG 373
+ T S ++ PE +M +S+SD+++FGV++ E+ + G+ ++ N
Sbjct: 173 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 374 EH--NLVEWARPHLGERRRF 391
EH + RPHL + +
Sbjct: 232 EHIAQGLRLYRPHLASEKVY 251
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 117/304 (38%), Gaps = 60/304 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V G K VA+K + +G E++ E + +L H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV+L G C + ++ E+M G L N+L +++ + + +L
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+ ++RD N L++ K+SDFGL++ +
Sbjct: 129 SKQFLHRDLAARNCLVNDQGV-------------------------VKVSDFGLSRYVLD 163
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 376
+ T S ++ PE +M +S+SD+++FGV++ E+ + + + N E
Sbjct: 164 DEYTS-SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-- 220
Query: 377 LVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP----LMSEV 432
H+ + R YR P L ++K + C RP L+S +
Sbjct: 221 ----TAEHIAQGLRLYR---PHL-------ASEKVYTIMYSCWHEKADERPTFKILLSNI 266
Query: 433 VEAL 436
++ +
Sbjct: 267 LDVM 270
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K+++FG + P +T + GT Y PE + + D
Sbjct: 149 -------------ELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ A C+ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSATD---------CV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
L +
Sbjct: 265 QLSTI 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 32/201 (15%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
+G VAVK ++ Q + EV + D H N+V++ + ++ ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
L + + L + + LA+LH + VI+RD K+ +ILL
Sbjct: 129 LTD--IVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLS 183
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 341
FGFC A++S KD P+ ++GT + APE +
Sbjct: 184 DFGFC----------------AQIS-----KDVPK------RKXLVGTPYWMAPEVISRS 216
Query: 342 HLTSRSDVYSFGVVLLEMLTG 362
+ D++S G++++EM+ G
Sbjct: 217 LYATEVDIWSLGIMVIEMVDG 237
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-KLSDFGLAKD-GPEGDKTHVSTRVM 327
++ DA +A N+ I+ + N++ NA K+ DFG+A+ G+ + V+
Sbjct: 138 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 197
Query: 328 GTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP 371
GT Y +PE + +RSDVYS G VL E+LTG + P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 241
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 144/375 (38%), Gaps = 81/375 (21%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
F+ E + G+G FG V G + TG++VA+K + D ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLGK---------EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 191 DLVHLNLVKLIGYCI---EDDQRLL----VYEFMPRG---SLENHLFRRSLPLPWSIRMK 240
L H N+V+L Y E D+R + V E++P N+ R+ P P I++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ + LH + V +RD K N+L++ D
Sbjct: 134 FLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEA------------------------D 168
Query: 301 YNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLL 357
KL DFG AK E + ++ +R Y APE + H T+ D++S G +
Sbjct: 169 GTLKLCDFGSAKKLSPSEPNVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFA 223
Query: 358 EMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDP----------------RLEG 401
EM+ G + G+ L E R R R ++P +
Sbjct: 224 EMMLGEPIFRGDNSAGQ--LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFS 281
Query: 402 HFSIKGAQKAAQLAAHCLSRDPKAR---------PLMSEVVEALKPLPNLKDMASSSYYF 452
S+K A++A L + L P+ R P E+ + LPN KD+ + F
Sbjct: 282 DHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRF 341
Query: 453 QTMQAERIGSSPNTR 467
+ E + + +
Sbjct: 342 LPNEIEVMSEAQKAK 356
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 70/326 (21%)
Query: 112 VASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL 171
+ S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 MESKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVL 44
Query: 172 NHDGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR 228
L+ + EV L H N+++L GY + + L+ E+ P G++ L +
Sbjct: 45 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 104
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
S I A L++ H + VI+RD K N+LL G G
Sbjct: 105 LSKFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG---- 148
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSD 348
K++DFG + P + + GT Y PE + + D
Sbjct: 149 -------------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVD 191
Query: 349 VYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGA 408
++S GV+ E L G+ + N + + R+E F
Sbjct: 192 LWSLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVT 233
Query: 409 QKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L + L +P RP++ EV+E
Sbjct: 234 EGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 121/322 (37%), Gaps = 71/322 (22%)
Query: 120 TFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH 179
T +DL + R LG G FG V +EE + GL +KT+N D Q
Sbjct: 19 TIDDLFIFKRK------LGSGAFGDVH--LVEERSS-------GLERVIKTINKDRSQVP 63
Query: 180 KEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPW 235
E + AE+ L L H N++K+ + +V E G L + R L
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSE 123
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
++ LA+ H + V+++D K NIL
Sbjct: 124 GYVAELMKQMMNALAYFHSQH---VVHKDLKPENIL------------------------ 156
Query: 296 MLFQDYN----AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
FQD + K+ DFGLA+ + ST GT Y APE V +T + D++S
Sbjct: 157 --FQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPE-VFKRDVTFKCDIWS 210
Query: 352 FGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA 411
GVV+ +LTG + P+ R + P +A
Sbjct: 211 AGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE---CRPLTP------------QA 255
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
L L++DP+ RP ++V+
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVL 277
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 70/324 (21%)
Query: 114 SRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH 173
S+ R++ D ++ RP LG+G FG V+ + + +A+K L
Sbjct: 1 SKKRQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFK 44
Query: 174 DGLQG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS 230
L+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 45 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 104
Query: 231 LPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYG 290
I A L++ H + VI+RD K N+LL G G
Sbjct: 105 KFDEQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG------ 146
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
K++DFG + P + + GT Y PE + + D++
Sbjct: 147 -----------ELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMHDEKVDLW 191
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
S GV+ E L G+ + N + + R+E F +
Sbjct: 192 SLGVLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEG 233
Query: 411 AAQLAAHCLSRDPKARPLMSEVVE 434
A L + L +P RP++ EV+E
Sbjct: 234 ARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 38/227 (16%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG G FG V K EE T GL +A K + G++ +E E++ + L H
Sbjct: 96 ILGGGRFGQVHK--CEETAT-------GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
NL++L + +LV E++ G L + + S L + +G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+ +++ D K NIL C+ K+ DFGLA+
Sbjct: 205 -QMYILHLDLKPENIL--------------CVNRDA---------KQIKIIDFGLARRYK 240
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+K V+ GT + APE V ++ +D++S GV+ +L+G
Sbjct: 241 PREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 116/311 (37%), Gaps = 63/311 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWL 183
A +F LG+G FG V+ ++ +A+K L L+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRK---------FILALKVLFKAQLEKAGVEHQLR 53
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
EV L H N+++L GY + + L+ E+ P G++ L + S I
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT- 112
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
A L++ H + VI+RD K N+LL G G
Sbjct: 113 ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG-----------------EL 144
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
K++DFG + P +T + GT Y PE + + D++S GV+ E L G+
Sbjct: 145 KIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
+ N + + R+E F + A L + L +P
Sbjct: 201 PPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARDLISRLLKHNP 242
Query: 424 KARPLMSEVVE 434
RP++ EV+E
Sbjct: 243 SQRPMLREVLE 253
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 46 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 100 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 156
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 157 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 189
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 190 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 244
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 245 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 292
Query: 435 ALKPL 439
L +
Sbjct: 293 QLSTI 297
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 98/232 (42%), Gaps = 40/232 (17%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRG 220
TG VA+K ++ + L + E+ L +L H ++ +L ++ +V E+ P G
Sbjct: 34 TGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGG 93
Query: 221 SLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENY 280
L +++ + R+ + +A++H + +RD K N+L D Y
Sbjct: 94 ELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFD-----EY 144
Query: 281 GKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 339
K KL DFGL P+G+K + G+ YAAPE +
Sbjct: 145 HKL--------------------KLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQG 183
Query: 340 TGHLTSRSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 383
+L S +DV+S G++L ++ G D K G++++ +W P
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 398 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 452 HIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 508
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 509 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSR-YM 541
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 542 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 596
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 597 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 644
Query: 435 ALKPL 439
L +
Sbjct: 645 QLSTI 649
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 25/48 (52%)
Query: 218 PRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
P + F+ +L W I +++A+G +G+++L ++ P DF
Sbjct: 219 PVYRFDKECFKCALGSSWIISVELAIGPEEGISYLTDKGANPTHLADF 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 23 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 77 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 133
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 134 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 166
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 221
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 222 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 269
Query: 435 ALKPL 439
L +
Sbjct: 270 QLSTI 274
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 113/285 (39%), Gaps = 62/285 (21%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN-----LVKLIGYCIEDDQRLLVYEF 216
TG +AVK + G+KE + D+V + +V+ G I + + E
Sbjct: 49 TGHVIAVKQMRR---SGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105
Query: 217 MPRGSLENHLFRRSL-PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAV 275
M G+ L +R P+P I K+ + K L +L E+ VI+RD K SNILLD
Sbjct: 106 M--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLD-- 159
Query: 276 RAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 335
+ KL DFG++ G D R G Y AP
Sbjct: 160 -----------------------ERGQIKLCDFGIS--GRLVD-DKAKDRSAGCAAYMAP 193
Query: 336 EYVMTGHLTS-----RSDVYSFGVVLLEMLTGRRSMDKNRPNGEH-NLVEWARPHLGERR 389
E + T R+DV+S G+ L+E+ TG+ + + E V P
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP------ 247
Query: 390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
P L GH G ++ CL++D + RP ++++E
Sbjct: 248 -------PLLPGHMGFSGDFQS--FVKDCLTKDHRKRPKYNKLLE 283
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 21 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 75 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 131
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 132 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 164
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 165 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 219
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 220 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 267
Query: 435 ALKPL 439
L +
Sbjct: 268 QLSTI 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 20 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 74 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 130
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 131 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 163
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 164 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 218
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 219 KNNDVIGRIENGERLPMPPNCPPTL------------YSLMTKCWAYDPSRRPRFTELKA 266
Query: 435 ALKPL 439
L +
Sbjct: 267 QLSTI 271
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 15 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 69 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 125
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 126 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 158
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 213
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 214 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 261
Query: 435 ALKPL 439
L +
Sbjct: 262 QLSTI 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 121/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H+ + +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
A D N K++DFG + + G+K G+ YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
APE DV+S GV+L +++G + P NL E L + R
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
FY D L F I K L R E+ ++PLP+ KD
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
M S Y + +Q +G N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 101
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 156
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 157 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 188
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
K +G++ V + GT Y APE + + DV+S G ++ +L G +
Sbjct: 189 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 238
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
P E + ++ +L ++ Y + I+P AA L L DP ARP
Sbjct: 239 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 284
Query: 428 LMSEVV 433
++E++
Sbjct: 285 TINELL 290
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P L VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
L +
Sbjct: 265 QLSTI 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 6 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 110 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 148
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P + + GT Y PE + + D++S G
Sbjct: 149 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + Y+ I R+E F + A
Sbjct: 197 VLCYEFLVGKPPFEAN-----------------TYQETYKRIS-RVEFTFPDFVTEGARD 238
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 121/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ ++ + +A+K L L
Sbjct: 6 RQWALEDFEIG----RP---LGKGKFGNVYLAREKQ---------SKFILALKVLFKAQL 49
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 50 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 109
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 110 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 148
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P + + GT Y PE + + D++S G
Sbjct: 149 --------ELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 238
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 239 LISRLLKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P + + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 41/229 (17%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLV 193
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 29 MLGKGSFGEVLKCK---------DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N++KL + +V E G L + + +R +I G+ ++H
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH 138
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ +++RD K NILL++ +D + K+ DFGL+
Sbjct: 139 K---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLSTC 173
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+ T + R+ GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 174 FQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 120/305 (39%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYME 162
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
+ S + + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 163 DSTXXKASKGKLPI-KWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
L +
Sbjct: 265 QLSTI 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 99
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 154
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 155 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 186
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
K +G++ V + GT Y APE + + DV+S G ++ +L G +
Sbjct: 187 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 236
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
P E + ++ +L ++ Y + I+P AA L L DP ARP
Sbjct: 237 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 282
Query: 428 LMSEVV 433
++E++
Sbjct: 283 TINELL 288
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 70/321 (21%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R++ D ++ RP LG+G FG V+ + + +A+K L L
Sbjct: 3 RQWALEDFEIG----RP---LGKGKFGNVYLA---------REKQSKFILALKVLFKAQL 46
Query: 177 QG---HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 47 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD 106
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L++ H + VI+RD K N+LL G G
Sbjct: 107 EQRTATYIT-ELANALSYCHS---KRVIHRDIKPENLLL--------GSAG--------- 145
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
K++DFG + P + + GT Y PE + + D++S G
Sbjct: 146 --------ELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 354 VVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQ 413
V+ E L G+ + N + + R+E F + A
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRIS------------------RVEFTFPDFVTEGARD 235
Query: 414 LAAHCLSRDPKARPLMSEVVE 434
L + L +P RP++ EV+E
Sbjct: 236 LISRLLKHNPSQRPMLREVLE 256
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 58/254 (22%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW- 182
+KL NF +LG+G FG V + GT A+K L D + +
Sbjct: 16 VKLTDFNFL--MVLGKGSFGKVMLA---------DRKGTEELYAIKILKKDVVIQDDDVE 64
Query: 183 --LAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLP 234
+ E L L + + C + RL V E++ G L H+ F+ +
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
++ + I GL FLH+ R +IYRD K N++LD+
Sbjct: 125 YAAEISI------GLFFLHK---RGIIYRDLKLDNVMLDS-------------------- 155
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
+ + K++DFG+ K E V+TR GT Y APE + D +++G
Sbjct: 156 -----EGHIKIADFGMCK---EHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYG 207
Query: 354 VVLLEMLTGRRSMD 367
V+L EML G+ D
Sbjct: 208 VLLYEMLAGQPPFD 221
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 118/316 (37%), Gaps = 50/316 (15%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
G + ++L R K + + H+ + +++RD K N+LLDA
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDA----- 141
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
D N K++DFG + + G+K G+ YAAPE
Sbjct: 142 --------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQ 178
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR--FYRLID 396
DV+S GV+L +++G + P NL E L + R FY D
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIPFYMSTD 232
Query: 397 -PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD------MASSS 449
L F I K L R E+ ++PLP+ KD M S
Sbjct: 233 CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTELMVSMG 292
Query: 450 YYFQTMQAERIGSSPN 465
Y + +Q +G N
Sbjct: 293 YTREEIQDSLVGQRYN 308
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H+ + +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
A D N K++DFG + + G+K G+ YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
APE DV+S GV+L +++G + P NL E L + R
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
FY D L F I K L R E+ + PLP+ KD
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVAPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
M S Y + +Q +G N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 71/306 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 75
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 130
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 131 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 162
Query: 312 -KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
K +G++ V + GT Y APE + + DV+S G ++ +L G +
Sbjct: 163 TKVEYDGERKKV---LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG-------K 212
Query: 371 PNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARP 427
P E + ++ +L ++ Y + I+P AA L L DP ARP
Sbjct: 213 PPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPTARP 258
Query: 428 LMSEVV 433
++E++
Sbjct: 259 TINELL 264
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 69/322 (21%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 11 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 61
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
+ H N+V + D+ LV + + GS+ + H+ +S L S I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GL +LH+ + I+RD K NILL +D
Sbjct: 122 LREVLEGLEYLHKNGQ---IHRDVKAGNILLG-------------------------EDG 153
Query: 302 NAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSDVYSFGVVL 356
+ +++DFG++ G + + V +GT + APE + + G+ ++D++SFG+
Sbjct: 154 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITA 212
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA----- 411
+E+ TG K P L P P LE K K
Sbjct: 213 IELATGAAPYHKYPPMKVLMLTLQNDP-------------PSLETGVQDKEMLKKYGKSF 259
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
++ + CL +DP+ RP +E++
Sbjct: 260 RKMISLCLQKDPEKRPTAAELL 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H+ + +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
A D N K++DFG + + G+K G YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDA---FCGAPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
APE DV+S GV+L +++G + P NL E L + R
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
FY D L F I K L R E+ ++PLP+ KD
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
M S Y + +Q +G N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 69/322 (21%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ-GHKEWLAEVNF 188
++ + ++G G V + AP K VA+K +N + Q E L E+
Sbjct: 16 DYELQEVIGSGATAVVQAAY-----CAPKKE----KVAIKRINLEKCQTSMDELLKEIQA 66
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKI 241
+ H N+V + D+ LV + + GS+ + H+ +S L S I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GL +LH+ + I+RD K NILL +D
Sbjct: 127 LREVLEGLEYLHKNGQ---IHRDVKAGNILLG-------------------------EDG 158
Query: 302 NAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPEYV--MTGHLTSRSDVYSFGVVL 356
+ +++DFG++ G + + V +GT + APE + + G+ ++D++SFG+
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITA 217
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKA----- 411
+E+ TG K P L P P LE K K
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDP-------------PSLETGVQDKEMLKKYGKSF 264
Query: 412 AQLAAHCLSRDPKARPLMSEVV 433
++ + CL +DP+ RP +E++
Sbjct: 265 RKMISLCLQKDPEKRPTAAELL 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 41/230 (17%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDL 192
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++KL + +V E G L + + +R +I G+ ++
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H+ +++RD K NILL++ +D + K+ DFGL+
Sbjct: 138 HK---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLST 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+ T + R+ GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 173 CFQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 41/230 (17%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDL 192
+LG+G FG V K T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKC---------KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++KL + +V E G L + + +R +I G+ ++
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H+ +++RD K NILL++ +D + K+ DFGL+
Sbjct: 138 HK---HNIVHRDLKPENILLESKE----------------------KDCDIKIIDFGLST 172
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+ T + R+ GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 173 CFQQN--TKMKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 122/305 (40%), Gaps = 55/305 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLVHL 195
+GEG FG V +G +P P + VA+KT + +E +L E + H
Sbjct: 18 IGEGQFGDVHQGIY----MSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
++VKLIG I ++ ++ E G L + L R L + + A + LA+L E
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL--E 128
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
++R ++RD N+L+ + C+ KL DFGL++
Sbjct: 129 SKR-FVHRDIAARNVLVSS---------NDCV----------------KLGDFGLSRYM- 161
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRP-NGE 374
E + +++ + APE + TS SDV+ FGV + E+L M +P G
Sbjct: 162 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL-----MHGVKPFQGV 216
Query: 375 HNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
N R GER P L L C + DP RP +E+
Sbjct: 217 KNNDVIGRIENGERLPMPPNCPPTLYS------------LMTKCWAYDPSRRPRFTELKA 264
Query: 435 ALKPL 439
L +
Sbjct: 265 QLSTI 269
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 121/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAV+ ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H+ + +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
A D N K++DFG + + G+K G+ YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKLDT---FCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
APE DV+S GV+L +++G + P NL E L + R
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
FY D L F I K L R E+ ++PLP+ KD
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
M S Y + +Q +G N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
VI+RD K+ NILL D + KL+DFG A+ P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
E K + ++GT + APE V + D++S G++ +EM+ G
Sbjct: 169 EQSK---RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 120/322 (37%), Gaps = 62/322 (19%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAV+ ++ L ++ EV + L H N+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAK------GLAFLHEEAERPVIYRDFKTSNILLD 273
G + ++L RMK AK + + H+ + +++RD K N+LLD
Sbjct: 98 GEVFDYLVAHG-------RMKEKEARAKFRQIVSAVQYCHQ---KFIVHRDLKAENLLLD 147
Query: 274 AVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 333
A D N K++DFG + + G+K G+ YA
Sbjct: 148 A-------------------------DMNIKIADFGFSNEFTFGNKL---DEFCGSPPYA 179
Query: 334 APEYVMTGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR-- 390
APE DV+S GV+L +++G D NL E L + R
Sbjct: 180 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIP 233
Query: 391 FYRLID-PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD----- 444
FY D L F I K L R E+ ++PLP+ KD
Sbjct: 234 FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVEPLPDYKDPRRTE 293
Query: 445 -MASSSYYFQTMQAERIGSSPN 465
M S Y + +Q +G N
Sbjct: 294 LMVSMGYTREEIQDSLVGQRYN 315
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
VI+RD K+ NILL D + KL+DFG A+ P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
E K + ++GT + APE V + D++S G++ +EM+ G
Sbjct: 169 EQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ F+ E A ER VI+RD K N+L+ Y
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG--------------Y 149
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
G K++DFG + P + R M GT Y PE + +
Sbjct: 150 KG-----------ELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 348 DVYSFGVVLLEMLTGRRSMD 367
D++ GV+ E L G D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 81
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 136
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 137 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 168
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
DG E KT + GT Y APE + + DV+S G ++ +L G
Sbjct: 169 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 217
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
+P E + ++ +L ++ Y + I+P AA L L DP
Sbjct: 218 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 261
Query: 425 ARPLMSEVV 433
ARP ++E++
Sbjct: 262 ARPTINELL 270
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 136
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
VI+RD K+ NILL D + KL+DFG A+ P
Sbjct: 137 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 168
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
E K + ++GT + APE V + D++S G++ +EM+ G
Sbjct: 169 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
VI+RD K+ NILL D + KL+DFG A+ P
Sbjct: 138 ---VIHRDIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
E K + ++GT + APE V + D++S G++ +EM+ G
Sbjct: 170 EQSK---RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 42/247 (17%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
F + + + ++ + +LG+G FG V TG AVK ++ ++
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVI---------LCKDKITGQECAVKVISKRQVKQ 72
Query: 179 HKE---WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
+ L EV L L H N++KL + + LV E G L + + R
Sbjct: 73 KTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSE 131
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+I G+ ++H+ +++RD K N+LL++
Sbjct: 132 VDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKS------------------- 169
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
+D N ++ DFGL+ K +GT Y APE V+ G + DV+S GV+
Sbjct: 170 ---KDANIRIIDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVI 222
Query: 356 LLEMLTG 362
L +L+G
Sbjct: 223 LYILLSG 229
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 133 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 164
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
DG E KT + GT Y APE + + DV+S G ++ +L G
Sbjct: 165 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 213
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
+P E + ++ +L ++ Y + I+P AA L L DP
Sbjct: 214 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 257
Query: 425 ARPLMSEVV 433
ARP ++E++
Sbjct: 258 ARPTINELL 266
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 128/309 (41%), Gaps = 77/309 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LG+GGF F+ I + T V G + K+L Q K + E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGK---IVPKSLLLKPHQREKMSM-EISIHRSLAHQ 77
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLAF 251
++V G+ ++D +V E R SL E H R++L P + +R +I LG +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGCQ----Y 132
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH VI+RD K N+ L+ +D K+ DFGLA
Sbjct: 133 LHRNR---VIHRDLKLGNLFLN-------------------------EDLEVKIGDFGLA 164
Query: 312 K----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
DG E KT + GT Y APE + + DV+S G ++ +L G
Sbjct: 165 TKVEYDG-ERKKT-----LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVG----- 213
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRL---IDPRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
+P E + ++ +L ++ Y + I+P AA L L DP
Sbjct: 214 --KPPFETSCLKET--YLRIKKNEYSIPKHINP------------VAASLIQKMLQTDPT 257
Query: 425 ARPLMSEVV 433
ARP ++E++
Sbjct: 258 ARPTINELL 266
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 10 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 57
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 58 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 110
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ F+ E A ER VI+RD K N+L+ Y
Sbjct: 111 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG--------------Y 150
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
G K++DFG + P + R M GT Y PE + +
Sbjct: 151 KG-----------ELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKV 194
Query: 348 DVYSFGVVLLEMLTGRRSMD 367
D++ GV+ E L G D
Sbjct: 195 DLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
RKFT +D + RP LG+G FG V+ ++N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + E+ L H N++++ Y + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 236 SIRMKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ F+ E A ER VI+RD K N+L+ Y
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG--------------Y 149
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
G K++DFG + P + R M GT Y PE + +
Sbjct: 150 KG-----------ELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGKTHDEKV 193
Query: 348 DVYSFGVVLLEMLTGRRSMD 367
D++ GV+ E L G D
Sbjct: 194 DLWCAGVLCYEFLVGMPPFD 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 98/238 (41%), Gaps = 47/238 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLV 193
LG G FG V G E TG VAVK LN ++ + E+ L
Sbjct: 24 LGVGTFGKVKVGKHE---------LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +++KL +V E++ G L +++ + L ++ G+ + H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCH 133
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
V++RD K N+LLDA NAK++DFGL+
Sbjct: 134 RHM---VVHRDLKPENVLLDA-------------------------HMNAKIADFGLSNM 165
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTGRRSMDKN 369
+G+ S G+ YAAPE V++G L + D++S GV+L +L G D +
Sbjct: 166 MSDGEFLRXSC---GSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 45/170 (26%)
Query: 203 YC-IEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEA 256
+C +DD+ L +V E+MP G L N + +P W + + +AL A + +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--- 197
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
RD K N+LLD K G + KL+DFG E
Sbjct: 198 ------RDVKPDNMLLD--------KHG-----------------HLKLADFGTCMKMDE 226
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
H T V GT Y +PE + + G+ D +S GV L EML G
Sbjct: 227 TGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
++ + +LG+G FG V K I TG AVK ++ ++ + L E
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 99
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
V L L H N++KL + + LV E G L + + R +I
Sbjct: 100 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 158
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
G+ ++H+ +++RD K N+LL++ +D N ++
Sbjct: 159 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 193
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+ K +GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 194 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 64/251 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPG----TGLTVAVKTLNHDGLQ--GHKEWL 183
N+R + +G+G F A VK TG VAVK ++ L ++
Sbjct: 16 NYRLQKTIGKGNF-------------AKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
EV + L H N+VKL + LV E+ G + ++L RMK
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-------RMKEKE 115
Query: 244 GAAK------GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
AK + + H+ + +++RD K N+LLD
Sbjct: 116 ARAKFRQIVSAVQYCHQ---KYIVHRDLKAENLLLDG----------------------- 149
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-RSDVYSFGVVL 356
D N K++DFG + + G+K G+ YAAPE DV+S GV+L
Sbjct: 150 --DMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
Query: 357 LEMLTGRRSMD 367
+++G D
Sbjct: 205 YTLVSGSLPFD 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 4 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 49
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 50 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 107
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 108 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 149
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 150 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 202
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 203 YAMGLVFWEI 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
++ + +LG+G FG V K I TG AVK ++ ++ + L E
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 100
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
V L L H N++KL + + LV E G L + + R +I
Sbjct: 101 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 159
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
G+ ++H+ +++RD K N+LL++ +D N ++
Sbjct: 160 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 194
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+ K +GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 195 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 9 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 54
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 55 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 112
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 113 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 154
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 155 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 207
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 208 YAMGLVFWEI 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
++ + +LG+G FG V K I TG AVK ++ ++ + L E
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
V L L H N++KL + + LV E G L + + R +I
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 135
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
G+ ++H+ +++RD K N+LL++ +D N ++
Sbjct: 136 LSGITYMHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+ K +GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 171 IDFGLSTHFEASKKMKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 3 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 48
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 49 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 106
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 148
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 149 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 201
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 202 YAMGLVFWEI 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 91/234 (38%), Gaps = 42/234 (17%)
Query: 137 LGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDL 192
LG G +G C K E +K N + + H+E E++ L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N++KL + LV EF G L + R I G+ +L
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYL 162
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-- 310
H + +++RD K NILL+ N++L N K+ DFGL
Sbjct: 163 H---KHNIVHRDIKPENILLENK------------------NSLL----NIKIVDFGLSS 197
Query: 311 --AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+KD D+ +GT Y APE V+ + DV+S GV++ +L G
Sbjct: 198 FFSKDYKLRDR-------LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 38/244 (15%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 237
+ WL NF VK + + + E+ G+L + + +L
Sbjct: 67 YYAAWLERRNF---------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
++ + L+++H + +I+RD K NI +D R G FG
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA----------- 163
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
++ + L L G ++ T +GT Y A E + TGH + D+YS G++
Sbjct: 164 -KNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIF 221
Query: 357 LEML 360
EM+
Sbjct: 222 FEMI 225
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 6 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 51
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 52 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 109
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 110 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 151
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 152 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 204
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 205 YAMGLVFWEI 214
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 29 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 74
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 75 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 132
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 133 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 174
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 175 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 227
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 228 YAMGLVFWEI 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 110/275 (40%), Gaps = 74/275 (26%)
Query: 109 ELKVASRLRKFTFND----LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGL 164
E K A+ + KF N +KL NF +LG+G FG V + GT
Sbjct: 319 EEKTANTISKFDNNGNRDRMKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDE 367
Query: 165 TVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIG---------YCIEDDQRL-LVY 214
AVK L D + + + + +V ++ L G C + RL V
Sbjct: 368 LYAVKILKKDVV------IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421
Query: 215 EFMPRGSLENHL-----FRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
E++ G L H+ F+ + ++ + I GL FL + +IYRD K N
Sbjct: 422 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQSKG---IIYRDLKLDN 472
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-G 328
++LD+ + + K++DFG+ K E V+T+ G
Sbjct: 473 VMLDS-------------------------EGHIKIADFGMCK---ENIWDGVTTKXFCG 504
Query: 329 TYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
T Y APE + D ++FGV+L EML G+
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 114/316 (36%), Gaps = 50/316 (15%)
Query: 162 TGLTVAVKTLNHDGLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VAVK ++ L ++ EV L H N+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
G + ++L R K + + H+ + +++RD K N+LLDA
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDA----- 148
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
D N K++DFG + + G+K G YAAPE
Sbjct: 149 --------------------DXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQ 185
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR--FYRLID 396
DV+S GV+L +++G D NL E L + R FY D
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPFYXSTD 239
Query: 397 -PRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKD------MASSS 449
L F I K L R E+ ++PLP+ KD S
Sbjct: 240 CENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDELKPYVEPLPDYKDPRRTELXVSXG 299
Query: 450 YYFQTMQAERIGSSPN 465
Y + +Q +G N
Sbjct: 300 YTREEIQDSLVGQRYN 315
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 60/250 (24%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
R + +G+G FG V++G G VAVK + + + W E
Sbjct: 42 RTIVLQESIGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEI 87
Query: 189 LGDLV--HLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
++ H N++ I +D+ Q LV ++ GSL ++L R ++ + I K+A
Sbjct: 88 YQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLA 145
Query: 243 LGAAKGLAFLHEEAE----RPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
L A GLA LH E +P I +RD K+ NIL+ K G C
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK--------KNGTCC---------- 187
Query: 298 FQDYNAKLSDFGLA-KDGPEGDKTHVS-TRVMGTYGYAAPEY----VMTGHLTS--RSDV 349
++D GLA + D ++ +GT Y APE + H S R+D+
Sbjct: 188 -------IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADI 240
Query: 350 YSFGVVLLEM 359
Y+ G+V E+
Sbjct: 241 YAMGLVFWEI 250
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 69/258 (26%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF- 188
N + L+G G +G V+KG ++E +P VAVK + Q ++ E N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE------RP-----VAVKVFSFANRQN---FINEKNIY 59
Query: 189 -LGDLVHLNLVKLI--GYCIEDDQR---LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+ + H N+ + I + D R LLV E+ P GSL +L + W ++A
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLA 117
Query: 243 LGAAKGLAFLHEEAER-----PVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+GLA+LH E R P I +RD + N+L+ G C+
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV--------KNDGTCV--------- 160
Query: 297 LFQDYNAKLSDFGLA------KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS--- 347
+SDFGL+ + G++ + + +GT Y APE V+ G + R
Sbjct: 161 --------ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXES 211
Query: 348 -----DVYSFGVVLLEML 360
D+Y+ G++ E+
Sbjct: 212 ALKQVDMYALGLIYWEIF 229
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 50/250 (20%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLT--VAVKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
+ WL NF+ + + + +E + +Y+ + +L LFR+ L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
+ L+++H + +I+RD K NI +D R G FG
Sbjct: 127 ---------------EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLA----- 163
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVY 350
++ + L L G ++ T +GT Y A E + TGH + D+Y
Sbjct: 164 -------KNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAMYVATEVLDGTGHYNEKIDMY 215
Query: 351 SFGVVLLEML 360
S G++ EM+
Sbjct: 216 SLGIIFFEMI 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAEVNFLGDLV 193
LG+G +G V+K + TG VAVK + D Q + E+ L +L
Sbjct: 17 LGKGAYGIVWKS---------IDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 194 -HLNLVKLIGYCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
H N+V L+ D+ R LV+++M + H R+ L + + K +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 251 FLHEEAERPVIYRDFKTSNILLDA---VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
+LH +++RD K SNILL+A V+ ++G + NN+ N +
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS-INENTEN 179
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
F D + T + T Y APE ++ + T D++S G +L E+L G+
Sbjct: 180 F--------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G+G G V+ + TG VA++ +N + + E+ + + + N
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+V + + D+ +V E++ GSL + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHSNQ 137
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL-AKDGP 315
VI+R+ K+ NILL D + KL+DFG A+ P
Sbjct: 138 ---VIHRNIKSDNILLG-------------------------MDGSVKLTDFGFCAQITP 169
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
E K + ++GT + APE V + D++S G++ +EM+ G
Sbjct: 170 EQSK---RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 122 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 153
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK E T VA+K L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
R V++RD K N+L++ ++ KL+DFGLA+
Sbjct: 119 --SRNVLHRDLKPQNLLIN-------------------------RNGELKLADFGLARAF 151
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM 366
G + + T Y P+ + L S S D++S G + E+ R +
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
RD K N+LLD FG C+ K++ G+ +
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 230
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
+GT Y +PE + + G+ D +S GV L EML G
Sbjct: 231 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 191
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
RD K N+LLD FG C+ K++ G+ +
Sbjct: 192 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 225
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
+GT Y +PE + + G+ D +S GV L EML G
Sbjct: 226 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 96/237 (40%), Gaps = 46/237 (19%)
Query: 131 FRPESLLGEGGFGCVF--KGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE---WLAE 185
++ + +LG+G FG V K I TG AVK ++ ++ + L E
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKI-----------TGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
V L L H N+ KL + + LV E G L + + R +I
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQV 135
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
G+ + H+ +++RD K N+LL++ +D N ++
Sbjct: 136 LSGITYXHK---NKIVHRDLKPENLLLESKS----------------------KDANIRI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+ K +GT Y APE V+ G + DV+S GV+L +L+G
Sbjct: 171 IDFGLSTHFEASKKXKDK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 102/256 (39%), Gaps = 62/256 (24%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNF 188
+F P LG GGFG VF+ + + A+K + + +E + EV
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDC---------NYAIKRIRLPNRELAREKVMREVKA 56
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL--ENHLFRRSLPLPW----------- 235
L L H +V+ +E + + P+ L + L R+ W
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 236 -SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
S+ + I L A+ + FLH + +++RD K SNI FF
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNI---------------------FFT 152
Query: 295 NMLFQDYNAKLSDFGL--AKDGPEGDKTHVS--------TRVMGTYGYAAPEYVMTGHLT 344
D K+ DFGL A D E ++T ++ T +GT Y +PE + +
Sbjct: 153 ----MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS 208
Query: 345 SRSDVYSFGVVLLEML 360
+ D++S G++L E+L
Sbjct: 209 HKVDIFSLGLILFELL 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 44/169 (26%)
Query: 203 YCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALGAAKGLAFLHEEAE 257
Y +DD+ L +V E+MP G L N + +P W + + +AL A + F+H
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH---- 196
Query: 258 RPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEG 317
RD K N+LLD FG C+ K++ G+ +
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCM----------------KMNKEGMVR----- 230
Query: 318 DKTHVSTRVMGTYGYAAPEYVMT----GHLTSRSDVYSFGVVLLEMLTG 362
+GT Y +PE + + G+ D +S GV L EML G
Sbjct: 231 -----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD-GLQGHKEWLAEVNFLGDLVHL 195
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLAFLHE 254
N+VK G+ E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +RD K N+LLD + N K+SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGLATVF 154
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 56/135 (41%), Gaps = 34/135 (25%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
+P I KI L K L L E + +I+RD K SNILLD
Sbjct: 122 IPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLD------------------- 160
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTSRSD 348
+ N KL DFG++ G D TR G Y APE + RSD
Sbjct: 161 ------RSGNIKLCDFGIS--GQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSD 211
Query: 349 VYSFGVVLLEMLTGR 363
V+S G+ L E+ TGR
Sbjct: 212 VWSLGITLYELATGR 226
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
R++T D + RP LG+G FG V+ ++ K L V KT L G
Sbjct: 7 RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 55 VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
I A L++ H + VI+RD K N+LL + N
Sbjct: 113 RTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGS-------------------NG 149
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
L K++DFG + P +T + GT Y PE + + D++S GV+
Sbjct: 150 EL------KIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 356 LLEMLTG 362
E L G
Sbjct: 200 CYEFLVG 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 80/200 (40%), Gaps = 35/200 (17%)
Query: 167 AVKTLNHDGLQGHKE---WLAEVN-FLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL 222
AVK L + KE ++E N L ++ H LV L D+ V +++ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 223 ENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
HL R L R A A L +LH ++YRD K NILLD+
Sbjct: 127 FYHLQRERCFLEPRARF-YAAEIASALGYLHSLN---IVYRDLKPENILLDSQ------- 175
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
G + L+DFGL K+ E + T ++ GT Y APE +
Sbjct: 176 -GHIV-----------------LTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQP 215
Query: 343 LTSRSDVYSFGVVLLEMLTG 362
D + G VL EML G
Sbjct: 216 YDRTVDWWCLGAVLYEMLYG 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 40/250 (16%)
Query: 115 RLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHD 174
R +F N + N+ + LG+G F V + V TGL A K +N
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTK 65
Query: 175 GLQGH--KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLP 232
L ++ E L H N+V+L E+ LV++ + G L + R
Sbjct: 66 KLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
I + +A+ H +++R+ K N+LL A +A+
Sbjct: 126 SEADASHCIQ-QILESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA----------- 169
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
KL+DFGLA + + + H GT GY +PE + + D+++
Sbjct: 170 ----------VKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWAC 216
Query: 353 GVVLLEMLTG 362
GV+L +L G
Sbjct: 217 GVILYILLVG 226
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 82/209 (39%), Gaps = 35/209 (16%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VA+K ++ L ++ EV + L H N+VKL + L+ E+
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
G + ++L R K + + H+ + +++RD K N+LLDA
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDA----- 146
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
D N K++DFG + + G K G+ YAAPE
Sbjct: 147 --------------------DMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQ 183
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMD 367
DV+S GV+L +++G D
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 120/308 (38%), Gaps = 55/308 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV G C+ D+ +LV EF+ GSL+ +L + + ++++A A + FL E
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+ + NILL G F KLSD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPF-----------------IKLSDPGISITVLP 173
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG----RRSMDKNRP 371
D + R+ + PE + +L +D +SFG L E+ +G ++D R
Sbjct: 174 KDI--LQERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR- 226
Query: 372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
+ E R ++L P+ A + A L +C+ +P RP
Sbjct: 227 ----------KLQFYEDR--HQLPAPK---------AAELANLINNCMDYEPDHRPSFRA 265
Query: 432 VVEALKPL 439
++ L L
Sbjct: 266 IIRDLNSL 273
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 47/266 (17%)
Query: 107 EEELKVASRLR--KFTFNDLKLATRNFRPESLLGEGGFGCVF---KGWIEENGTA-PVKP 160
E+ L V LR T + K+ NF +LG G +G VF K + G +K
Sbjct: 30 EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPR 219
T+ K + + ++ L + LV L+ Y + + +L L+ +++
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH------YAFQTETKLHLILDYING 143
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
G L HL +R +++ + L LH+ +IYRD K NILLD+
Sbjct: 144 GELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLG---IIYRDIKLENILLDS----- 194
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
+ + L+DFGL+K+ D+T + GT Y AP+ V
Sbjct: 195 --------------------NGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVR 233
Query: 340 ---TGHLTSRSDVYSFGVVLLEMLTG 362
+GH D +S GV++ E+LTG
Sbjct: 234 GGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 121/310 (39%), Gaps = 77/310 (24%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
+GEG FG E+G V +K +N + +E EV L ++ H
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYV---------IKEINISRMSSKEREESRREVAVLANMKH 82
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWSIRMKIALGAAK 247
N+V+ E+ +V ++ G L + LF+ L W +++ +AL
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL---- 138
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
+H+ R +++RD K+ NI L +D +L D
Sbjct: 139 --KHVHD---RKILHRDIKSQNIFLT-------------------------KDGTVQLGD 168
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
FG+A+ ++ +GT Y +PE ++SD+++ G VL E+ T + + +
Sbjct: 169 FGIAR--VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLID---PRLEGHFSIKGAQKAAQLAAHCLSRDPK 424
NLV ++I P + H+S +QL R+P+
Sbjct: 227 ---AGSMKNLV-------------LKIISGSFPPVSLHYSYDLRSLVSQL----FKRNPR 266
Query: 425 ARPLMSEVVE 434
RP ++ ++E
Sbjct: 267 DRPSVNSILE 276
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRGS--LENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 94/239 (39%), Gaps = 52/239 (21%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHL-------FRRSLPLPWSIRMKIALGAA 246
H N++ I D R E M L HL ++ L
Sbjct: 100 HENIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQIL 154
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ + K+
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLNTTX-------------------------DLKIC 186
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+L++ C + K+
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLINTT----------C---------------DLKIC 186
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ PE D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 187 DFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 61/267 (22%)
Query: 113 ASRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN 172
A L + + L+ F L+G G +G V+KG VK TG A+K ++
Sbjct: 8 ARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-------RHVK--TGQLAAIKVMD 58
Query: 173 HDGLQGHKEWLAEVNFLGDLVH-LNLVKLIGYCIE------DDQRLLVYEFMPRGSLENH 225
G + +E E+N L H N+ G I+ DDQ LV EF GS+ +
Sbjct: 59 VTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDL 117
Query: 226 LFR---RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGK 282
+ +L W I +GL+ LH+ VI+RD K N+LL
Sbjct: 118 IKNTKGNTLKEEWI--AYICREILRGLSHLHQHK---VIHRDIKGQNVLLT--------- 163
Query: 283 FGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVMT 340
++ KL DFG++ + D+T V R +GT + APE +
Sbjct: 164 ----------------ENAEVKLVDFGVS---AQLDRT-VGRRNTFIGTPYWMAPEVIAC 203
Query: 341 GH-----LTSRSDVYSFGVVLLEMLTG 362
+SD++S G+ +EM G
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
TG VAVK LN ++ + E+ L H +++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
G L +++ + R ++ + + H V++RD K N+LLDA
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA---- 146
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
NAK++DFGL+ +G+ S G+ YAAPE V
Sbjct: 147 ---------------------HMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-V 181
Query: 339 MTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
++G L + D++S GV+L +L G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 81/209 (38%), Gaps = 35/209 (16%)
Query: 162 TGLTVAVKTLNHDGLQ--GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPR 219
TG VA+K ++ L ++ EV + L H N+VKL + L+ E+
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 220 GSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN 279
G + ++L R K + + H+ + +++RD K N+LLDA
Sbjct: 99 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDA----- 149
Query: 280 YGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 339
D N K++DFG + + G K G YAAPE
Sbjct: 150 --------------------DMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQ 186
Query: 340 TGHLTS-RSDVYSFGVVLLEMLTGRRSMD 367
DV+S GV+L +++G D
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIRMKIALGAAKGLA 250
L H N+VK G+ E + + L E+ G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH + +RD K N+LLD + N K+SDFGL
Sbjct: 119 YLHGIG---ITHRDIKPENLLLD-------------------------ERDNLKISDFGL 150
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSMDK 368
A ++ + ++ GT Y APE + + DV+S G+VL ML G D+
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
ML+ R
Sbjct: 221 MLSNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+ C
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
ML+ R
Sbjct: 221 MLSNR 225
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 136/329 (41%), Gaps = 79/329 (24%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-- 193
+G+G +G V++G W G +VAVK + + + W E ++
Sbjct: 16 VGKGRYGEVWRGLW------------HGESVAVKIFSS---RDEQSWFRETEIYNTVLLR 60
Query: 194 HLNLVKLIGYCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGL 249
H N++ I + Q L+ + GSL + L R++L ++R+ A+ AA GL
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRL--AVSAACGL 118
Query: 250 AFLHEE----AERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
A LH E +P I +RDFK+ N+L+ + CI
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVKS-------NLQCCI----------------- 154
Query: 305 LSDFGLAKDGPEG-DKTHVSTR-VMGTYGYAAPEY----VMTGHLTSR--SDVYSFGVVL 356
+D GLA +G D + +GT Y APE + T S +D+++FG+VL
Sbjct: 155 -ADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVL 213
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI--DPRLEGHFSIKGAQKAAQL 414
E+ RR++ NG +VE RP FY ++ DP E + +
Sbjct: 214 WEI--ARRTI----VNG---IVEDYRPP------FYDVVPNDPSFEDMKKVVCVDQQTPT 258
Query: 415 AAHCLSRDPKARPLMSEVVEALKPLPNLK 443
+ L+ DP L + E P P+ +
Sbjct: 259 IPNRLAADPVLSGLAQMMRECWYPNPSAR 287
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTS------------------------ 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
ML+ R
Sbjct: 223 MLSNR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 162 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
ML+ R
Sbjct: 221 MLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+ C
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
ML+ R
Sbjct: 223 MLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 31 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLAFR 81
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+ C
Sbjct: 133 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 163
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 164 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 222
Query: 359 MLTGR 363
ML+ R
Sbjct: 223 MLSNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 171
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 172 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 172
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 173 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 163
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 164 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 164
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 49 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 150
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+ C
Sbjct: 151 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTT----------C-------------- 181
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 182 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 240
Query: 359 MLTGR 363
ML+ R
Sbjct: 241 MLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ + K+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTTX-------------------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-WLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 33 SYIGEGAYGMVCSAYDNLNK---------VRVAIKKISPFEHQTYXQRTLREIKILLRFR 83
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 134
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+
Sbjct: 135 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 165
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 166 -DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 224
Query: 359 MLTGR 363
ML+ R
Sbjct: 225 MLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 164
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 165 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 170
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 171 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 203
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 204 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 259 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 316
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 317 AIALCSRLLEYTPTAR 332
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 64/245 (26%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH-KEWLAEVNFLGDLV 193
S +GEG +G V + N + VA+K ++ Q + + L E+ L
Sbjct: 29 SYIGEGAYGMVCSAYDNVNK---------VRVAIKKISPFEHQTYCQRTLREIKILLRFR 79
Query: 194 HLNLVKLIG-------------YCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
H N++ + Y ++D +Y+ + L N L
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------- 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+GL ++H V++RD K SN+LL+
Sbjct: 131 --YQILRGLKYIHSAN---VLHRDLKPSNLLLNTTX------------------------ 161
Query: 301 YNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLE 358
+ K+ DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L E
Sbjct: 162 -DLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 220
Query: 359 MLTGR 363
ML+ R
Sbjct: 221 MLSNR 225
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRGS--LENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 281 ALCSRLLEYTPTAR 294
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 168
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 169 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 201
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 202 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 257 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 314
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 315 AIALCSRLLEYTPTAR 330
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 174
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 175 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 166
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 167 DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 211
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 212 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 244
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 245 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 300 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 357
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 358 AIALCSRLLEYTPTAR 373
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 199
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 200 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 255 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 312
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 313 AIALCSRLLEYTPTAR 328
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+ + LH+ +++RD K NILLD D N K
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 164
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
L+DFG + G+K V GT Y APE + D++S GV++
Sbjct: 165 LTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 359 MLTG 362
+L G
Sbjct: 222 LLAG 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 160
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 161 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 193
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 194 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 249 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 306
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 307 AIALCSRLLEYTPTAR 322
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 47/237 (19%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFL 189
F + LG G F V EE T G AVK + L+G + + E+ L
Sbjct: 24 FEFKETLGTGAFSEVVLA--EEKAT-------GKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAK 247
+ H N+V L + LV + + G L + + + S ++ L A
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA-- 132
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL-- 305
+ +LH +++RD K N+L YY QD +K+
Sbjct: 133 -VYYLHRMG---IVHRDLKPENLL----------------YYS--------QDEESKIMI 164
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
SDFGL+K +GD V + GT GY APE + + D +S GV+ +L G
Sbjct: 165 SDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 137
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 138 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 170
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 171 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 226 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 283
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 284 AIALCSRLLEYTPTAR 299
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT--LNHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK E T VA+K L+ D L E+ L +L H
Sbjct: 10 IGEGTYGTVFKAKNRE---------THEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH- 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
R V++RD K N+L++ ++ KL++FGLA+
Sbjct: 119 --SRNVLHRDLKPQNLLIN-------------------------RNGELKLANFGLARAF 151
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGRRSM 366
G + + T Y P+ + L S S D++S G + E+ R +
Sbjct: 152 --GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 145
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 178
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 179 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 234 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 291
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 292 AIALCSRLLEYTPTAR 307
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 60
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 119
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+ + LH+ +++RD K NILLD D N K
Sbjct: 120 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 151
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
L+DFG + G+K V GT Y APE + D++S GV++
Sbjct: 152 LTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 359 MLTG 362
+L G
Sbjct: 209 LLAG 212
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 54
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 55 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 113
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
+ +A+ H +++R+ K N+LL A +A+ KL
Sbjct: 114 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 148
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFGLA + + + H GT GY +PE + + D+++ GV+L +L G
Sbjct: 149 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPV-IYVKLYMYQLF 166
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 199
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 200 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 257 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 314
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 315 ALCSRLLEYTPTAR 328
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 47/244 (19%)
Query: 130 NFRPESLLGEGGFG----CVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAE 185
N+ P+ +LG G C+ K +E + G + + + + + + L E
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ----ELREATLKE 73
Query: 186 VNFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALG 244
V+ L + H N+++L + LV++ M +G L ++L + + L KI
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRA 132
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+ + LH+ +++RD K NILLD D N K
Sbjct: 133 LLEVICALHK---LNIVHRDLKPENILLD-------------------------DDMNIK 164
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH------LTSRSDVYSFGVVLLE 358
L+DFG + G+K V GT Y APE + D++S GV++
Sbjct: 165 LTDFGFSCQLDPGEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221
Query: 359 MLTG 362
+L G
Sbjct: 222 LLAG 225
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 126/316 (39%), Gaps = 73/316 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDK--THVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
DFG AK G+ +++ +R Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRY-----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQK 410
+ +G LVE + R R ++ P+++ H F + +
Sbjct: 221 PIFPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPE 278
Query: 411 AAQLAAHCLSRDPKAR 426
A L + L P AR
Sbjct: 279 AIALCSRLLEYTPTAR 294
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
+ +A+ H +++R+ K N+LL A +A+ KL
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 149
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFGLA + + + H GT GY +PE + + D+++ GV+L +L G
Sbjct: 150 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 178 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 235 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 293 ALCSRLLEYTPTAR 306
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 93/237 (39%), Gaps = 40/237 (16%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--KEWLAE 185
+ N+ + LG+G F V + V TGL A K +N L ++ E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRC---------VHKTTGLEFAAKIINTKKLSARDFQKLERE 55
Query: 186 VNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
L H N+V+L E+ LV++ + G L + R I
Sbjct: 56 ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QI 114
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
+ +A+ H +++R+ K N+LL A +A+ KL
Sbjct: 115 LESIAYCHSNG---IVHRNLKPENLLL-ASKAKGAA---------------------VKL 149
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFGLA + + + H GT GY +PE + + D+++ GV+L +L G
Sbjct: 150 ADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 55/249 (22%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA- 184
+AT + P + +G G +G V+K P +G VA+K++ G L
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGGGGGGGLPI 56
Query: 185 ----EVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP 232
EV L L H N+V+L+ C D+ + LV+E + + L +L + P
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 233 -LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
LP + +GL FLH +++RD K NIL+ +
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS----------------- 155
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
KL+DFGLA+ T V+ T Y APE ++ + D++S
Sbjct: 156 --------GGTVKLADFGLARI---YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWS 204
Query: 352 FGVVLLEML 360
G + EM
Sbjct: 205 VGCIFAEMF 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 281 ALCSRLLEYTPTAR 294
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 281 ALCSRLLEYTPTAR 294
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 140
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 174 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 231 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 288
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 289 ALCSRLLEYTPTAR 302
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 151
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 184
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 185 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 242 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 299
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 300 ALCSRLLEYTPTAR 313
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 31 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 136
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 137 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 169
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 170 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 227 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 284
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 285 ALCSRLLEYTPTAR 298
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 102/256 (39%), Gaps = 70/256 (27%)
Query: 124 LKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+KL NF +LG+G FG V + GT AVK L D + +
Sbjct: 17 MKLTDFNFL--MVLGKGSFGKVM---------LSERKGTDELYAVKILKKDVV------I 59
Query: 184 AEVNFLGDLVHLNLVKLIG---------YCIEDDQRL-LVYEFMPRGSLENHL-----FR 228
+ + +V ++ L G C + RL V E++ G L H+ F+
Sbjct: 60 QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFK 119
Query: 229 RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY 288
+ ++ + I GL FL + +IYRD K N++LD+
Sbjct: 120 EPHAVFYAAEIAI------GLFFLQSKG---IIYRDLKLDNVMLDS-------------- 156
Query: 289 YGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTSRS 347
+ + K++DFG+ K E V+T+ GT Y APE +
Sbjct: 157 -----------EGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 348 DVYSFGVVLLEMLTGR 363
D ++FGV+L EML G+
Sbjct: 203 DWWAFGVLLYEMLAGQ 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 38/211 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHK---EWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMP 218
TG VAVK LN ++ + E+ L H +++KL +V E++
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
G L +++ + R ++ + + H V++RD K N+LLDA
Sbjct: 95 GGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHM---VVHRDLKPENVLLDA---- 146
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
NAK++DFGL+ +G+ S G+ YAAPE V
Sbjct: 147 ---------------------HMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-V 181
Query: 339 MTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
++G L + D++S GV+L +L G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 132
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 166 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 223 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 280
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 281 ALCSRLLEYTPTAR 294
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V + V+ TG K +N E++ + L H
Sbjct: 59 LGSGAFGVVHRC---------VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
L+ L + + +L+ EF+ G L + + + + + A +GL +HE +
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+++ D K NI+ + +A + K+ DFGLA
Sbjct: 170 ---IVHLDIKPENIMCETKKASS-----------------------VKIIDFGLATKLNP 203
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+ V+T T +AAPE V + +D+++ GV+ +L+G
Sbjct: 204 DEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGE---------LVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 178 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 235 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 292
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 293 ALCSRLLEYTPTAR 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 124/314 (39%), Gaps = 69/314 (21%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG V++ + ++G VA+K + LQ + E+ + L H
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALGAA- 246
N+V+L + ++ LV +++P + H R LP I +K+ +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLF 133
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+ LA++H + +RD K N+LLD A KL
Sbjct: 134 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAV------------------------LKLC 166
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG AK G+ + + + Y APE + TS DV+S G VL E+L G+
Sbjct: 167 DFGSAKQLVRGEP---NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRFYRLID--------PRLEGH-----FSIKGAQKAA 412
+ +G LVE + R R ++ P+++ H F + +A
Sbjct: 224 FPGD--SGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI 281
Query: 413 QLAAHCLSRDPKAR 426
L + L P AR
Sbjct: 282 ALCSRLLEYTPTAR 295
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 41/202 (20%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
+P I KIA+ K L LH ++ VI+RD K SN+L++A+ FG Y
Sbjct: 106 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY---- 159
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
L D +AKD G K +++ + PE G+ + +SD++S
Sbjct: 160 ----LVDD---------VAKDIDAGCKPYMAPERIN------PELNQKGY-SVKSDIWSL 199
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G+ ++E+ R D W P + ++ P+L K + +
Sbjct: 200 GITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLPAD---KFSAEFV 244
Query: 413 QLAAHCLSRDPKARPLMSEVVE 434
+ CL ++ K RP E+++
Sbjct: 245 DFTSQCLKKNSKERPTYPELMQ 266
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+ + LH VI+RD K SN+L+++
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
+ + K+ DFGLA+ D D + + T + T Y APE ++T SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
S G +L E+ R
Sbjct: 208 SCGCILAELFLRR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 119/308 (38%), Gaps = 55/308 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG+G F +FKG E G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV G C D+ +LV EF+ GSL+ +L + + ++++A A + FL E
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
+I+ + NILL G F KLSD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPF-----------------IKLSDPGISITVLP 173
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEMLTG----RRSMDKNRP 371
D + R+ + PE + +L +D +SFG L E+ +G ++D R
Sbjct: 174 KDI--LQERI----PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR- 226
Query: 372 NGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSE 431
+ E R ++L P+ A + A L +C+ +P RP
Sbjct: 227 ----------KLQFYEDR--HQLPAPK---------AAELANLINNCMDYEPDHRPSFRA 265
Query: 432 VVEALKPL 439
++ L L
Sbjct: 266 IIRDLNSL 273
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
+ +GL FLH +++RD K NIL+ + FG
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL--------- 158
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
A++ + +A D V+ T Y APE ++ + D++S G
Sbjct: 159 --------ARIYSYQMALDP-----------VVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
+ EM
Sbjct: 200 IFAEMF 205
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 101/237 (42%), Gaps = 55/237 (23%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH VI+RD K N LF N+ D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 AK----DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
A DG E KT + GT Y APE + + D++S G +L +L G+
Sbjct: 189 ATKIEFDG-ERKKT-----LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 48/247 (19%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKT-LNHDG 175
R++T D + RP LG+G FG V+ ++ K L V KT L G
Sbjct: 7 RQWTLEDFDIG----RP---LGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAG 54
Query: 176 LQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
++ + EV L H N+++L GY + + L+ E+ P G++ L + S
Sbjct: 55 VE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ 112
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
I A L++ H + VI+RD K N+LL + N
Sbjct: 113 RTATYIT-ELANALSYCHS---KRVIHRDIKPENLLLGS-------------------NG 149
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
L K++DFG + P + + GT Y PE + + D++S GV+
Sbjct: 150 EL------KIADFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 356 LLEMLTG 362
E L G
Sbjct: 200 CYEFLVG 206
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+ + LH VI+RD K SN+L+++
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
+ + K+ DFGLA+ D D + + T + T Y APE ++T SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
S G +L E+ R
Sbjct: 208 SCGCILAELFLRR 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V + + TG A K + + E+ + L H
Sbjct: 59 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++ D K NI+ R+ KL DFGL
Sbjct: 170 ---YVHLDLKPENIMFTTKRSN-----------------------ELKLIDFGLTAHLDP 203
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V+T GT +AAPE + +D++S GV+ +L+G
Sbjct: 204 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
+ +GL FLH +++RD K NIL+ +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS-------------------- 147
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
KL+DFGLA+ V+ T Y APE ++ + D++S G
Sbjct: 148 -----GGTVKLADFGLARI---YSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
+ EM
Sbjct: 200 IFAEMF 205
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 44/233 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 29 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 79
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
N+V+ +G E+ + E +P GSL L + PL + I + GL +L
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 138
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H+ +++RD K N+L++ Y G+ K+SDFG +K
Sbjct: 139 HDNQ---IVHRDIKGDNVLINT-------------YSGVL-----------KISDFGTSK 171
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
+ GT Y APE + G +D++S G ++EM TG+
Sbjct: 172 R--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK-EWLAEVNFLGDLVHL 195
LGEG + V+KG T VA+K + + +G + EV+ L DL H
Sbjct: 10 LGEGTYATVYKG---------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
N+V L + LV+E++ + L+ +L + +GLA+ H +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
V++RD K N+L++ R E KL+DFGLA+
Sbjct: 120 K---VLHRDLKPQNLLINE-RGE------------------------LKLADFGLARAKS 151
Query: 316 EGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
KT+ + V T Y P+ ++ + +++ D++ G + EM TGR
Sbjct: 152 IPTKTYDNEVV--TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 48/236 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG---HKEWLAEVNFLGDLV 193
LGEG FG V T VA+K ++ L+ H E+++L L
Sbjct: 17 LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H +++KL ++V E+ G L +++ + R + + + H
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH 125
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+++RD K N+LLD + N K++DFGL+
Sbjct: 126 RHK---IVHRDLKPENLLLD-------------------------DNLNVKIADFGLSNI 157
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS--RSDVYSFGVVLLEMLTGRRSMD 367
+G+ S G+ YAAPE V+ G L + DV+S G+VL ML GR D
Sbjct: 158 MTDGNFLKTSC---GSPNYAAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 83/226 (36%), Gaps = 38/226 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V + + TG A K + + E+ + L H
Sbjct: 165 LGTGAFGVVHRV---------TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++ D K NI+ R+ KL DFGL
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNEL-----------------------KLIDFGLTAHLDP 309
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V+T GT +AAPE + +D++S GV+ +L+G
Sbjct: 310 KQSVKVTT---GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 30 QNLSP---IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 167 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
LTGR
Sbjct: 222 LTGR 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
+A + L H N+V+L C + + LV+E + + L +L + P +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ +GL FLH V++RD K NIL+ +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
KL+DFGLA+ T V+ T Y APE ++ + D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
EM
Sbjct: 209 FAEMF 213
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH VI+RD K N LF N+ D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
A K +G++ + GT Y APE + + D++S G +L +L G+
Sbjct: 189 ATKIEFDGER---KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 44/233 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+LG+G +G V+ G N + +A+K + + + E+ L H
Sbjct: 15 VLGKGTYGIVYAGRDLSNQ---------VRIAIKEIPERDSRYSQPLHEEIALHKHLKHK 65
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK---GLAFL 252
N+V+ +G E+ + E +P GSL L + PL + I + GL +L
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKYL 124
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H+ +++RD K N+L++ Y G+ K+SDFG +K
Sbjct: 125 HDNQ---IVHRDIKGDNVLINT-------------YSGVL-----------KISDFGTSK 157
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTG--HLTSRSDVYSFGVVLLEMLTGR 363
+ GT Y APE + G +D++S G ++EM TG+
Sbjct: 158 R--LAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 170
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 171 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H V++RD K SN+LL+ C + K+
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLNTT----------C---------------DLKIC 171
Query: 307 DFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTGR 363
DFGLA+ P+ D T + T Y APE ++ ++S D++S G +L EML+ R
Sbjct: 172 DFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH VI+RD K N LF N+ D + K+ DFGL
Sbjct: 157 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 188
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
A K +G++ + GT Y APE + + D++S G +L +L G+
Sbjct: 189 ATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
LTGR
Sbjct: 224 LTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
LTGR
Sbjct: 224 LTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 30 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 167 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
LTGR
Sbjct: 222 LTGR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
LTGR
Sbjct: 224 LTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
LTGR
Sbjct: 219 LTGR 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 36 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 141
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 142 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 172
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 173 XELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 360 LTGR 363
LTGR
Sbjct: 228 LTGR 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +R V++RD K N+L++ ++ K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
G T + T Y AP+ +M + ++ D++S G + EM+ G
Sbjct: 149 --AFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
LTGR
Sbjct: 229 LTGR 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 52/246 (21%)
Query: 126 LATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK-EWL 183
+AT + P + +G G +G V+K P +G VA+K++ +G +G +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTV 51
Query: 184 AEVNFLGDL---VHLNLVKLIGYCIED--DQRL---LVYEFMPRGSLENHLFRRSLP-LP 234
EV L L H N+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLP 110
Query: 235 WSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFN 294
+ +GL FLH +++RD K NIL+ +
Sbjct: 111 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTS-------------------- 147
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGV 354
KL+DFGLA+ V+ T Y APE ++ + D++S G
Sbjct: 148 -----GGTVKLADFGLARI---YSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 199
Query: 355 VLLEML 360
+ EM
Sbjct: 200 IFAEMF 205
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
LTGR
Sbjct: 229 LTGR 232
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 30 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
LTGR
Sbjct: 222 LTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 24 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 71
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 130 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 161 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 360 LTGR 363
LTGR
Sbjct: 216 LTGR 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
LTGR
Sbjct: 219 LTGR 222
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
+A + L H N+V+L C + + LV+E + + L +L + P +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ +GL FLH V++RD K NIL+ +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
KL+DFGLA+ T V+ T Y APE ++ + D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
EM
Sbjct: 209 FAEMF 213
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
LTGR
Sbjct: 223 LTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 48 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 153
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 154 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 184
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 185 CELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 360 LTGR 363
LTGR
Sbjct: 240 LTGR 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 32 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 79
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 137
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 138 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 168
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 169 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 360 LTGR 363
LTGR
Sbjct: 224 LTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 44 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 91
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 149
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 150 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 180
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 181 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 360 LTGR 363
LTGR
Sbjct: 236 LTGR 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 49/234 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFLGDLVH 194
LG+GGF ++ I + T V G + ++ H KE ++ E+ L +
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 85
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALGAAKGLA 250
++V G+ +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 140
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH VI+RD K N LF N+ D + K+ DFGL
Sbjct: 141 YLHNNR---VIHRDLKLGN---------------------LFLND----DMDVKIGDFGL 172
Query: 311 A-KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
A K +G++ + GT Y APE + + D++S G +L +L G+
Sbjct: 173 ATKIEFDGER---KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 30 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 77
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 135
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 136 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 166
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 167 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 360 LTGR 363
LTGR
Sbjct: 222 LTGR 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 164 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
LTGR
Sbjct: 219 LTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 21 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 126
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 127 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 157
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 360 LTGR 363
LTGR
Sbjct: 213 LTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 36 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 83
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 141
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 142 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 172
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 173 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 360 LTGR 363
LTGR
Sbjct: 228 LTGR 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 37 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYREL 84
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 142
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 143 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 173
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 174 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 360 LTGR 363
LTGR
Sbjct: 229 LTGR 232
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
+ G + K L++ + + K+ L +EVN L +L H N+V+ I+ L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
E+ G L + + R+ L + +R+ L A + V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
+ LD + N KL DFGLA+ T + +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLAR--ILNHDTSFAKTFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
Y +PE + +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 45 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 92
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 150
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 151 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 181
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 182 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 360 LTGR 363
LTGR
Sbjct: 237 LTGR 240
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 27 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 74
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 132
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 133 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 163
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 164 SELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 360 LTGR 363
LTGR
Sbjct: 219 LTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
LTGR
Sbjct: 223 LTGR 226
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +R V++RD K N+L++ ++ K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
G T + T Y AP+ +M + ++ D++S G + EM+ G
Sbjct: 149 --AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 23 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 70
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 129 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 159
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 160 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 360 LTGR 363
LTGR
Sbjct: 215 LTGR 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 22 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 127
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 128 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 158
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 360 LTGR 363
LTGR
Sbjct: 214 LTGR 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 51/245 (20%)
Query: 127 ATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHK----E 181
A + + + +GEG +G VFK +NG G VA+K + G +G
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIR 60
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPW 235
+A + L H N+V+L C + + LV+E + + L +L + P +P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT 119
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ +GL FLH V++RD K NIL+ +
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTS--------------------- 155
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
KL+DFGLA+ T V+ T Y APE ++ + D++S G +
Sbjct: 156 ----SGQIKLADFGLAR---IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 356 LLEML 360
EM
Sbjct: 209 FAEMF 213
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 168 SELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
LTGR
Sbjct: 223 LTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 48 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 95
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 153
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 154 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 184
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 185 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 360 LTGR 363
LTGR
Sbjct: 240 LTGR 243
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
+ G + K L++ + + K+ L +EVN L +L H N+V+ I+ L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
E+ G L + + R+ L + +R+ L A + V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
+ LD + N KL DFGLA+ T + +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLAR--ILNHDTSFAKAFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
Y +PE + +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 22 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 69
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 127
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 128 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 158
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 159 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 360 LTGR 363
LTGR
Sbjct: 214 LTGR 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 79/207 (38%), Gaps = 51/207 (24%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
+P I KIA+ K L LH + VI+RD K SN+L++A+ FG Y
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY---- 203
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----MTGHLTSRS 347
D AK D G Y APE + G+ + +S
Sbjct: 204 -----LVDSVAKTID-------------------AGCKPYMAPERINPELNQKGY-SVKS 238
Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
D++S G+ ++E+ R D W P + ++ P+L K
Sbjct: 239 DIWSLGITMIELAILRFPYD-----------SWGTP-FQQLKQVVEEPSPQLPAD---KF 283
Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ + + CL ++ K RP E+++
Sbjct: 284 SAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 97/231 (41%), Gaps = 48/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEVNFLGDL 192
+GEG +G V+K + G T A+K + +G+ + E++ L +L
Sbjct: 10 IGEGTYGVVYKA----------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKEL 57
Query: 193 VHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H N+VKL + +LV+E + + L+ L L L G+A+
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +R V++RD K N+L++ ++ K++DFGLA+
Sbjct: 117 H---DRRVLHRDLKPQNLLIN-------------------------REGELKIADFGLAR 148
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
G T + T Y AP+ +M + ++ D++S G + EM+ G
Sbjct: 149 --AFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 41/202 (20%)
Query: 233 LPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLF 292
+P I KIA+ K L LH ++ VI+RD K SN+L++A+ FG Y
Sbjct: 133 IPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGY---- 186
Query: 293 FNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSF 352
L D +AKD G K + + + PE G+ + +SD++S
Sbjct: 187 ----LVDD---------VAKDIDAGCKPYXAPERIN------PELNQKGY-SVKSDIWSL 226
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G+ +E+ R D W P + ++ P+L K + +
Sbjct: 227 GITXIELAILRFPYDS-----------WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFV 271
Query: 413 QLAAHCLSRDPKARPLMSEVVE 434
+ CL ++ K RP E+ +
Sbjct: 272 DFTSQCLKKNSKERPTYPELXQ 293
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 53/240 (22%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL----NHDGLQGHKEWLAEV 186
+R + LGEG +G V+K + T TVA+K + +G+ G + EV
Sbjct: 36 YRRITKLGEGTYGEVYKA---------IDTVTNETVAIKRIRLEHEEEGVPGTA--IREV 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIA--- 242
+ L +L H N+++L I + RL L++E+ EN L + P + M++
Sbjct: 85 SLLKELQHRNIIEL-KSVIHHNHRLHLIFEYA-----ENDLKKYMDKNP-DVSMRVIKSF 137
Query: 243 -LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
G+ F H R ++RD K N+LL A
Sbjct: 138 LYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVL------------------ 176
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEML 360
K+ DFGLA+ G T + T Y PE ++ + H ++ D++S + EML
Sbjct: 177 --KIGDFGLARAF--GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 59/253 (23%)
Query: 128 TRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN-HDGLQGHKEWLAEV 186
+ +F+ +SLLGEG +G V +A KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM------- 239
L H N++ + QR +E + L + L S +M
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
+ + LH VI+RD K SN+L+++
Sbjct: 116 YFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINS------------------------- 147
Query: 300 DYNAKLSDFGLAK--DGPEGDKTHVS------TRVMGTYGYAAPEYVMTGHLTSRS-DVY 350
+ + K+ DFGLA+ D D + + + T Y APE ++T SR+ DV+
Sbjct: 148 NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207
Query: 351 SFGVVLLEMLTGR 363
S G +L E+ R
Sbjct: 208 SCGCILAELFLRR 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 38 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 88
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL +C +DD++L + G L ++ R+ +
Sbjct: 89 DVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 146
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 147 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 178
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 179 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 67/264 (25%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
N+ + L+G G +G V+ + T VA+K +N + L K L E+
Sbjct: 27 NYIIKHLIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 188 FLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
L L +++L I DD L + + L+ LF+ + L I
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKTILY 136
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G F+HE +I+RD K +N LL+ QD +
Sbjct: 137 NLLLGENFIHESG---IIHRDLKPANCLLN-------------------------QDCSV 168
Query: 304 KLSDFGLAKD-------------------GPEGD--KTHVSTRVMGTYGYAAPEYVMTGH 342
K+ DFGLA+ GP K +++ V+ T Y APE ++
Sbjct: 169 KVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV-TRWYRAPELILLQE 227
Query: 343 LTSRS-DVYSFGVVLLEMLTGRRS 365
++S D++S G + E+L +S
Sbjct: 228 NYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 56/249 (22%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEV-- 186
+ + P+ ++G G V + V TG AVK + + E L EV
Sbjct: 94 QKYDPKDVIGRGVSSVVRRC---------VHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 187 ------NFLGDLV-HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 239
+ L + H +++ LI LV++ M +G L ++L + + L
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETR 203
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
I + ++FLH +++RD K NILLD +NM
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLD--------------------DNM--- 237
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS------RSDVYSFG 353
+LSDFG + G+K + GT GY APE + + D+++ G
Sbjct: 238 --QIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG 292
Query: 354 VVLLEMLTG 362
V+L +L G
Sbjct: 293 VILFTLLAG 301
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
L G +LH+ +++RD K N+LL++ +D
Sbjct: 129 QVLS---GTTYLHK---HNIVHRDLKPENLLLESKS----------------------RD 160
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFGL+ G K +GT Y APE V+ + DV+S GV+L +L
Sbjct: 161 ALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILL 216
Query: 361 TG 362
G
Sbjct: 217 CG 218
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 101/254 (39%), Gaps = 60/254 (23%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+ R+ +G+G +G V++G W EN VAVK + + K W
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 48
Query: 184 AEVNFLGDLVHLNLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
E L + V L ++G+ D Q L+ + GSL ++L +L
Sbjct: 49 RETE-LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 107
Query: 237 IRMKIALGAAKGLAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
+R I L A GLA LH E +P I +RD K+ NIL+ K G C L
Sbjct: 108 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV--------KKNGQCCIADL 157
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS-- 345
M Q N D G + P +GT Y APE + S
Sbjct: 158 GLAVMHSQSTNQL--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYK 202
Query: 346 RSDVYSFGVVLLEM 359
R D+++FG+VL E+
Sbjct: 203 RVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 128/340 (37%), Gaps = 94/340 (27%)
Query: 125 KLATRNFRPESLLGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL 183
+ R +G+G +G V++G W EN VAVK + + K W
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWF 77
Query: 184 AEVNFLGDLVHLNLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
E L + V L ++G+ D Q L+ + GSL ++L +L
Sbjct: 78 RETE-LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC 136
Query: 237 IRMKIALGAAKGLAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
+R I L A GLA LH E +P I +RD K+ NIL+ K G C L
Sbjct: 137 LR--IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK--------KNGQCCIADL 186
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS-- 345
M Q N D G + P +GT Y APE + S
Sbjct: 187 GLAVMHSQSTNQL--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYK 231
Query: 346 RSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLI--DPRLEGH- 402
R D+++FG+VL E+ RR + NG +VE +P FY ++ DP E
Sbjct: 232 RVDIWAFGLVLWEV--ARRMV----SNG---IVEDYKPP------FYDVVPNDPSFEDMR 276
Query: 403 ----------------FSIKGAQKAAQLAAHCLSRDPKAR 426
FS A+L C ++P AR
Sbjct: 277 KVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 55/243 (22%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGY-----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
L + H N++ L+ +E+ + + + L N +S L +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN--IVKSQKLTDDHVQFL 130
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
+GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 IYQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDS 162
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEML 360
K+ DFGL + + +V+TR Y APE ++ H D++S G ++ E+L
Sbjct: 163 ELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 217
Query: 361 TGR 363
TGR
Sbjct: 218 TGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
L G +LH+ +++RD K N+LL++ +D
Sbjct: 112 QVLS---GTTYLHK---HNIVHRDLKPENLLLESKS----------------------RD 143
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFGL+ G K +GT Y APE V+ + DV+S GV+L +L
Sbjct: 144 ALIKIVDFGLSAHFEVGGKMK---ERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILL 199
Query: 361 TG 362
G
Sbjct: 200 CG 201
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ D+GLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 183 LAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 240
L EV L L H N++KL + + LV E G L + + R + ++ +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
L G+ +LH+ +++RD K N+LL++ +D
Sbjct: 144 QVLS---GVTYLHK---HNIVHRDLKPENLLLESKE----------------------KD 175
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML 360
K+ DFGL+ ++ + R +GT Y APE V+ + DV+S GV+L +L
Sbjct: 176 ALIKIVDFGLS--AVFENQKKMKER-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILL 231
Query: 361 TG--------RRSMDKNRPNGEHNLV--EWARPHLGERRRFYRLIDPRLEGHFSIKGAQK 410
G + + + G++ EW G + +++ + S + A +
Sbjct: 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291
Query: 411 AAQLAAHCLSRDPKAR-PLMSEVVEALKPLPNLKDMASSSYYFQTMQAERIGSSPNTR 467
+ C ++ P ++ +E ++ N + +A ++ + A ++ S T+
Sbjct: 292 HPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLY---MASKLTSQEETK 346
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDFGLARHTDDEMTGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 98/242 (40%), Gaps = 60/242 (24%)
Query: 137 LGEGGFGCVFKG-WIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
+G+G +G V++G W EN VAVK + + K W E L + V L
Sbjct: 16 VGKGRYGEVWRGSWQGEN------------VAVKIFSS---RDEKSWFRETE-LYNTVML 59
Query: 196 NLVKLIGYCIED-------DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
++G+ D Q L+ + GSL ++L +L +R I L A G
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIASG 117
Query: 249 LAFLHEEA----ERPVI-YRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
LA LH E +P I +RD K+ NIL+ K G C L M Q N
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVK--------KNGQCCIADLGLAVMHSQSTNQ 169
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY----VMTGHLTS--RSDVYSFGVVLL 357
D G + P +GT Y APE + S R D+++FG+VL
Sbjct: 170 L--DVG---NNPR----------VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214
Query: 358 EM 359
E+
Sbjct: 215 EV 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L + H N+V L L+ + + G L + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
+ +LH+ +++RD K N+L YY L +D +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 36/210 (17%)
Query: 159 KPGTGLTVAVKTLNHDGL-QGHKEWL-AEVNFLGDLVHLNLVKLIGYCIEDDQRLL--VY 214
+ G + K L++ + + K+ L +EVN L +L H N+V+ I+ L V
Sbjct: 27 RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86
Query: 215 EFMPRGSLENHLF-----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSN 269
E+ G L + + R+ L + +R+ L A + V++RD K +N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 270 ILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 329
+ LD + N KL DFGLA+ + + +GT
Sbjct: 147 VFLDGKQ-------------------------NVKLGDFGLARILNHDED--FAKEFVGT 179
Query: 330 YGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
Y +PE + +SD++S G +L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L + H N+V L L+ + + G L + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
+ +LH+ +++RD K N+L YY L +D +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 52/249 (20%)
Query: 117 RKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGL 176
R FT +D ++ RP LG+G FG V+ + + VA+K L +
Sbjct: 18 RHFTIDDFEIG----RP---LGKGKFGNVYLAR---------EKKSHFIVALKVLFKSQI 61
Query: 177 QGH---KEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 233
+ + E+ L H N+++L Y + + L+ E+ PRG L L ++S
Sbjct: 62 EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTF 120
Query: 234 PWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFF 293
I A L + H + VI+RD K N
Sbjct: 121 DEQRTATIMEELADALMYCHG---KKVIHRDIKPEN------------------------ 153
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
+L K++DFG + P + + GT Y PE + + D++ G
Sbjct: 154 -LLLGLKGELKIADFGWSVHAPSLRRK----TMCGTLDYLPPEMIEGRMHNEKVDLWCIG 208
Query: 354 VVLLEMLTG 362
V+ E+L G
Sbjct: 209 VLCYELLVG 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
+FR +LG G F V E+ T + VA+K + + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKEALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L + H N+V L L+ + + G L + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
+ +LH+ +++RD K N+L YY L +D +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 41/234 (17%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNF 188
+FR +LG G F V E+ T + VA+K + L+G + + E+
Sbjct: 21 DFR--DVLGTGAFSEVILA--EDKRTQKL-------VAIKCIAKKALEGKEGSMENEIAV 69
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKG 248
L + H N+V L L+ + + G L + + + ++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-RLIFQVLDA 128
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
+ +LH+ +++RD K N+L YY L +D +SDF
Sbjct: 129 VKYLHDLG---IVHRDLKPENLL----------------YYSLD------EDSKIMISDF 163
Query: 309 GLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 164 GLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 54/242 (22%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNF 188
++ S +G G +G V + VK +GL +AVK L+ + K E+
Sbjct: 53 YQTLSPVGSGAYGSVCSSY-------DVK--SGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 189 LGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
L + H N++ L+ E + LV M G+ N++ + ++ I
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI- 160
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+GL ++H +I+RD K SN+ ++ +D
Sbjct: 161 YQILRGLKYIHSAD---IIHRDLKPSNLAVN-------------------------EDCE 192
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLT 361
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LT
Sbjct: 193 LKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 362 GR 363
GR
Sbjct: 248 GR 249
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 101/273 (36%), Gaps = 68/273 (24%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVN 187
N+ + L+G G +G V+ + ++N VA+K +N + L K L E+
Sbjct: 29 NYEIKHLIGRGSYGYVYLAY-DKNANK--------NVAIKKVNRMFEDLIDCKRILREIT 79
Query: 188 FLGDLVHLNLVKLIGYCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
L L +++L I +D L + + L+ LF+ + L I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEQHVKTILY 138
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
G F+HE +I+RD K +N LL+ QD +
Sbjct: 139 NLLLGEKFIHESG---IIHRDLKPANCLLN-------------------------QDCSV 170
Query: 304 KLSDFGLAKDGPEGDKTHVS-----------------------TRVMGTYGYAAPEYVMT 340
K+ DFGLA+ H+ T + T Y APE ++
Sbjct: 171 KICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 230
Query: 341 G-HLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
+ T+ D++S G + E+L +S N N
Sbjct: 231 QENYTNSIDIWSTGCIFAELLNMMKSHINNPTN 263
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 294 NNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFG 353
N ++ D A L DFG+A + T + V GT Y APE H T R+D+Y+
Sbjct: 164 NILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALT 222
Query: 354 VVLLEMLTG 362
VL E LTG
Sbjct: 223 CVLYECLTG 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TG VAVK L+ + K E+
Sbjct: 21 QNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 68
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + + ++
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFL 126
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 127 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 157
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 360 LTGR 363
LTGR
Sbjct: 213 LTGR 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 87/231 (37%), Gaps = 47/231 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTL--NHDGLQGHKEWLAEVNFLGDLVH 194
+GEG +G VFK + TG VA+K + D K L E+ L L H
Sbjct: 11 IGEGSYGVVFKCRNRD---------TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
NLV L+ + LV+E+ L + L R +P + I + + F H+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK-- 312
I+RD K NIL+ KL DFG A+
Sbjct: 121 HN---CIHRDVKPENILITKHSV-------------------------IKLCDFGFARLL 152
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTG 362
GP + + T Y +PE ++ DV++ G V E+L+G
Sbjct: 153 TGP----SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TG VAVK L+ + K E+
Sbjct: 31 QNLSP---VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYREL 78
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 136
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 137 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 167
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 168 CELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 360 LTGR 363
LTGR
Sbjct: 223 LTGR 226
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 163
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 164 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 90/237 (37%), Gaps = 44/237 (18%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLV-H 194
LLGEG + V V G AVK + EV L +
Sbjct: 20 LLGEGAYAKV---------QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 195 LNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
N+++LI + EDD R LV+E + GS+ H+ ++ ++ A L FLH
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLH 128
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIY---YGLFFNNMLFQDYNAKLSDFGL 310
+ + +RD K NIL ++ E C + G+ NN +L
Sbjct: 129 TKG---IAHRDLKPENILCES--PEKVSPVKICDFDLGSGMKLNNSCTPITTPEL----- 178
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEY--VMTGHLT---SRSDVYSFGVVLLEMLTG 362
T G+ Y APE V T T R D++S GVVL ML+G
Sbjct: 179 -------------TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 88/235 (37%), Gaps = 52/235 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G F V+KG ++ T V + + L Q KE E L L H N
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEV---AWCELQDRKLTKSERQRFKE---EAEXLKGLQHPN 86
Query: 197 LVKLIGY---------CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
+V+ CI +LV E G+L+ +L R + +R K
Sbjct: 87 IVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLR-SWCRQILK 140
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
GL FLH P+I+RD K NI + G G + K+ D
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFIT-------GPTG-----------------SVKIGD 175
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
GLA + + V+GT + APE + S DVY+FG LE T
Sbjct: 176 LGLAT----LKRASFAKAVIGTPEFXAPEXYEEKYDES-VDVYAFGXCXLEXATS 225
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 155 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 186
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 187 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 187
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 188 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 146 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 177
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 178 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 45/231 (19%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH---KEWLAEVNFLGDLV 193
+G G +G V + + +G VA+K L+ Q K E+ L +
Sbjct: 32 VGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ 81
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLH 253
H N++ L+ F P SL N + L +P+ M+ L GL F
Sbjct: 82 HENVIGLLDV------------FTPASSLRN-FYDFYLVMPF---MQTDLQKIMGLKF-S 124
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
EE + ++Y+ K + A K G N + +D K+ DFGLA+
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPG---------NLAVNEDCELKILDFGLARH 175
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
+V TR Y APE +++ H D++S G ++ EMLTG+
Sbjct: 176 ADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 50/250 (20%)
Query: 130 NFRPESLLGEGGFGCVFKG---------WIEENGTAPVKPGTGLTVA--VKTLNHD-GLQ 177
+F ++LG+G FG V K I++ K T L+ + +LNH ++
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 178 GHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENH------LFRRSL 231
+ WL NF+ + + E + +Y+ + +L LFR+ L
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
+ L+++H + +I+R+ K NI +D R G FG
Sbjct: 127 ---------------EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFG------- 161
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVY 350
L ++ + L L G ++ T +GT Y A E + TGH + D Y
Sbjct: 162 -----LAKNVHRSLDILKLDSQNLPGSSDNL-TSAIGTAXYVATEVLDGTGHYNEKIDXY 215
Query: 351 SFGVVLLEML 360
S G++ E +
Sbjct: 216 SLGIIFFEXI 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
KGL ++H V++RD K N+ ++ +D K+
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVN-------------------------EDCELKIL 186
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ +V TR Y APE +++ H D++S G ++ EMLTG+
Sbjct: 187 DFGLARHADAEMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 111/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYEFMP-----------RGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E M RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 153
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 154 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L +M+ G + + E R + R+R + +
Sbjct: 201 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 236
Query: 413 QLAAHCLSRDPKARPLMSEV 432
L CL+ P RP E+
Sbjct: 237 HLIRWCLALRPSDRPTFEEI 256
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 57/262 (21%)
Query: 194 HLNLVKLIGYCIED----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALGAA 246
H N+++L+ YC+ + + L+ F RG+L N + R + L + + LG
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILL----DAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+GL +H + +RD K +NILL V + CI+ + QD+
Sbjct: 145 RGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE-YVMTGH--LTSRSDVYSFGVVLLEM 359
A+ T Y APE + + H + R+DV+S G VL M
Sbjct: 202 AQRC----------------------TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM 239
Query: 360 LTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCL 419
+ G D G+ + + +L S + + QL +
Sbjct: 240 MFGEGPYDMVFQKGDSVALA---------------VQNQLSIPQSPRHSSALWQLLNSMM 284
Query: 420 SRDPKAR---PLMSEVVEALKP 438
+ DP R PL+ +EAL+P
Sbjct: 285 TVDPHQRPHIPLLLSQLEALQP 306
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ D GLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D ++
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVN-------------------------EDCELRIL 165
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ E +V+TR Y APE ++ H D++S G ++ E+L G+
Sbjct: 166 DFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ FGLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 123/327 (37%), Gaps = 69/327 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
+A +N L H + +++L Y I D +Y M G+++ N ++ + PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
R + + +H+ +++ D K +N L+ + ML
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI--------------------VDGML 165
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSR 346
KL DFG+A + V +GT Y PE + ++ +
Sbjct: 166 ------KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
SDV+S G +L M G+ + + + + + +IDP E F
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDI 264
Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + CL RDPK R + E++
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D ++
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVN-------------------------EDSELRIL 173
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ E +V+TR Y APE ++ H D++S G ++ E+L G+
Sbjct: 174 DFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ D GLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 43/241 (17%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
++ AT R LG G FG V + +E+ T G AVK + + +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 115
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
E+ L +V L G E + E + GSL L + LP +
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY 171
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
A +GL +LH R +++ D K N+LL + + C + +
Sbjct: 172 LGQALEGLEYLHS---RRILHGDVKADNVLLSS----DGSHAALCDF-----------GH 213
Query: 302 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
L GL KD GD + GT + APE V+ ++ DV+S ++L ML
Sbjct: 214 AVCLQPDGLGKDLLTGD------YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 362 G 362
G
Sbjct: 268 G 268
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 43/206 (20%)
Query: 166 VAVKTLNH--DGLQGHKEWLAEVNFLGDLVHLNLVKLI-----GYCIEDDQRLLVYEFMP 218
VAVK L+ L + E+ L L H N++ L+ IED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 219 RGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAE 278
L N +S L + +GL ++H +I+RD K SN+ ++
Sbjct: 116 GADLNN--IVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVN----- 165
Query: 279 NYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 338
+D ++ DFGLA+ E +V+TR Y APE +
Sbjct: 166 --------------------EDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIM 200
Query: 339 MTG-HLTSRSDVYSFGVVLLEMLTGR 363
+ H D++S G ++ E+L G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L +M+ G + + E R + R+R + +
Sbjct: 202 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 237
Query: 413 QLAAHCLSRDPKARPLMSEV 432
L CL+ P RP E+
Sbjct: 238 HLIRWCLALRPSDRPTFEEI 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 168
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 169 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 216 GILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 217 GILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 138 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 168
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 169 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 215
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 216 GILLYDMVCG 225
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 156 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 187
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 188 DFGLARHTDDEMXGXVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 196
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 197 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 244 GILLYDMVCG 253
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 217 GILLYDMVCG 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 132 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 163
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 164 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 139 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 169
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 170 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 216
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 217 GILLYDMVCG 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 4 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 54
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 55 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 112
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
L +LH + +I+RD K NILL+ +
Sbjct: 113 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 144
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
D + +++DFG AK K + +GT Y +PE + SD+++ G ++ ++
Sbjct: 145 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 204
Query: 360 LTG 362
+ G
Sbjct: 205 VAG 207
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHL 343
N L D KL DFG+A + V +GT Y PE + +
Sbjct: 141 NFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 200
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
+ +SDV+S G +L M G+ + + + + + +IDP E F
Sbjct: 201 SPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEF 245
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + CL RDPK R + E++
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 229 GILLYDMVCG 238
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 57/244 (23%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEV 186
+N P +G G +G V A TGL VAVK L+ + K E+
Sbjct: 25 QNLSP---VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYREL 72
Query: 187 NFLGDLVHLNLVKLIGYCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 240
L + H N++ L+ E + LV M G+ N++ + ++
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFL 130
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
I +GL ++H +I+RD K SN+ ++ +D
Sbjct: 131 I-YQILRGLKYIHSA---DIIHRDLKPSNLAVN-------------------------ED 161
Query: 301 YNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEM 359
K+ D GLA+ + +V+TR Y APE ++ H D++S G ++ E+
Sbjct: 162 CELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 360 LTGR 363
LTGR
Sbjct: 217 LTGR 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 170
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 171 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 201
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 202 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 248
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 249 GILLYDMVCG 258
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DFGLA+ + V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 168 DFGLARHTDDEMAGFVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 229 GILLYDMVCG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 202 GILLYDMVCG 211
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 122/327 (37%), Gaps = 69/327 (21%)
Query: 121 FNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK 180
F + + R + +G GG VF+ E+ +K V ++ ++ L ++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYR 74
Query: 181 EWLAEVNFLGDLVHLN-LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSI 237
+A +N L H + +++L Y I D +Y M G+++ N ++ + PW
Sbjct: 75 NEIAYLNKLQQ--HSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE- 128
Query: 238 RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNML 297
R + + +H+ +++ D K +N L+ + ML
Sbjct: 129 RKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLI--------------------VDGML 165
Query: 298 FQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSR 346
KL DFG+A V +GT Y PE + ++ +
Sbjct: 166 ------KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 347 SDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIK 406
SDV+S G +L M G+ + + + + + +IDP E F
Sbjct: 220 SDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEFPDI 264
Query: 407 GAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + CL RDPK R + E++
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 124 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 154
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 155 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 201
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 202 GILLYDMVCG 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 3 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 53
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 54 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 111
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
L +LH + +I+RD K NILL+ +
Sbjct: 112 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 143
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
D + +++DFG AK K + +GT Y +PE + SD+++ G ++ ++
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203
Query: 360 LTG 362
+ G
Sbjct: 204 VAG 206
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 230 GILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 229 GILLYDMVCG 238
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 5 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 55
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 56 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 113
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
L +LH + +I+RD K NILL+ +
Sbjct: 114 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 145
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
D + +++DFG AK K + +GT Y +PE + SD+++ G ++ ++
Sbjct: 146 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 205
Query: 360 LTG 362
+ G
Sbjct: 206 VAG 208
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 166 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 196
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 197 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 243
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 244 GILLYDMVCG 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 123 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 153
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 154 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 200
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 201 GILLYDMVCG 210
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 157
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 158 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 188
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 189 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 236 GILLYDMVCG 245
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 230 GILLYDMVCG 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL Y +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 151 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 181
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 182 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 228
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 229 GILLYDMVCG 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 119 VLEAVRHCHNXG-----------VLHRDIKDENILIDLNRGE------------------ 149
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 150 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 197 GILLYDMVCG 206
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 230 GILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 152 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 182
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 183 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 229
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 230 GILLYDMVCG 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 93/243 (38%), Gaps = 48/243 (19%)
Query: 129 RNFRPES-----LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKE 181
R RPE +LGEG F V + T A+K L H +
Sbjct: 2 RKKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVP 52
Query: 182 WLA-EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRM 239
++ E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 53 YVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTR 110
Query: 240 KIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQ 299
L +LH + +I+RD K NILL+ +
Sbjct: 111 FYTAEIVSALEYLHGKG---IIHRDLKPENILLN-------------------------E 142
Query: 300 DYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
D + +++DFG AK K + +GT Y +PE + SD+++ G ++ ++
Sbjct: 143 DMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 202
Query: 360 LTG 362
+ G
Sbjct: 203 VAG 205
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 145
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 146 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 176
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 177 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 223
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L +M+ G + + E R + R+R + +
Sbjct: 224 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SXECQ 259
Query: 413 QLAAHCLSRDPKARPLMSEV 432
L CL+ P RP E+
Sbjct: 260 HLIRWCLALRPSDRPTFEEI 279
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+MP G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q K++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIKVADFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 121
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 122 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 152
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 153 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 199
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L +M+ G + + E R + R+R + +
Sbjct: 200 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 235
Query: 413 QLAAHCLSRDPKARPLMSEV 432
L CL+ P RP E+
Sbjct: 236 HLIRWCLALRPSDRPTFEEI 255
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+MP G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q K++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIKVADFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 91/245 (37%), Gaps = 51/245 (20%)
Query: 122 NDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE 181
++ AT R LG G FG V + +E+ T G AVK + + +
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR--MEDKQT-------GFQCAVKKVRLEVFRAE-- 134
Query: 182 WLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 241
E+ L +V L G E + E + GSL L + LP +
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY 190
Query: 242 ALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY 301
A +GL +LH R +++ D K N+LL +
Sbjct: 191 LGQALEGLEYLHS---RRILHGDVKADNVLLSS------------------------DGS 223
Query: 302 NAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLL 357
+A L DFG L DG G + GT + APE V+ ++ DV+S ++L
Sbjct: 224 HAALCDFGHAVCLQPDG-LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMML 282
Query: 358 EMLTG 362
ML G
Sbjct: 283 HMLNG 287
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 26/150 (17%)
Query: 295 NMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHL 343
N L D KL DFG+A + V +GT Y PE + +
Sbjct: 137 NFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 196
Query: 344 TSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHF 403
+ +SDV+S G +L M G+ + + + + + +IDP E F
Sbjct: 197 SPKSDVWSLGCILYYMTYGKTPFQQ---------------IINQISKLHAIIDPNHEIEF 241
Query: 404 SIKGAQKAAQLAAHCLSRDPKARPLMSEVV 433
+ + CL RDPK R + E++
Sbjct: 242 PDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 52/240 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVH 194
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 63 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 195 LNLVKL-------IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
N++ + + Y E +V + M S + + S PL +
Sbjct: 114 DNIIAIKDILRPTVPYG-EFKSVYVVLDLM--ESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
GL ++H VI+RD K SN+L++ ++ K+ D
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVN-------------------------ENCELKIGD 202
Query: 308 FGLAKD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRR 364
FG+A+ + + T + T Y APE +++ H T D++S G + EML R+
Sbjct: 203 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 118/311 (37%), Gaps = 69/311 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 116
Query: 197 -LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLH 253
+++L Y I D +Y M G+++ N ++ + PW R + + +H
Sbjct: 117 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 172
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ +++ D K +N L+ + ML KL DFG+A
Sbjct: 173 QHG---IVHSDLKPANFLI--------------------VDGML------KLIDFGIANQ 203
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSRSDVYSFGVVLLEMLTG 362
+ V +GT Y PE + ++ +SDV+S G +L M G
Sbjct: 204 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
+ + + + + + +IDP E F + + CL RD
Sbjct: 264 KTPFQQ---------------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 308
Query: 423 PKARPLMSEVV 433
PK R + E++
Sbjct: 309 PKQRISIPELL 319
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 118/311 (37%), Gaps = 69/311 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L H +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQ--HSD 69
Query: 197 -LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLH 253
+++L Y I D +Y M G+++ N ++ + PW R + + +H
Sbjct: 70 KIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIH 125
Query: 254 EEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKD 313
+ +++ D K +N L+ + ML KL DFG+A
Sbjct: 126 QHG---IVHSDLKPANFLI--------------------VDGML------KLIDFGIANQ 156
Query: 314 GPEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSRSDVYSFGVVLLEMLTG 362
+ V +GT Y PE + ++ +SDV+S G +L M G
Sbjct: 157 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 216
Query: 363 RRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRD 422
+ + + + + + +IDP E F + + CL RD
Sbjct: 217 KTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRD 261
Query: 423 PKARPLMSEVV 433
PK R + E++
Sbjct: 262 PKQRISIPELL 272
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 110/320 (34%), Gaps = 101/320 (31%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 119 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 149
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 150 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 353 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
G++L +M+ G + + E R + R+R + +
Sbjct: 197 GILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRV----------------SSECQ 232
Query: 413 QLAAHCLSRDPKARPLMSEV 432
L CL+ P RP E+
Sbjct: 233 HLIRWCLALRPSDRPTFEEI 252
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 114/326 (34%), Gaps = 97/326 (29%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFL 189
+R LLG+GGFG VF G + L VA+K + + + G V
Sbjct: 32 EYRLGPLLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCP 82
Query: 190 GDLV----------HLNLVKLIGYCIEDDQRLLVYEF-MPRGSLENHLFRRSLPLPWSIR 238
++ H +++L+ + + +LV E +P L ++ I
Sbjct: 83 LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDY-----------IT 131
Query: 239 MKIALGAAKGLAFLHEEA-------ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGL 291
K LG F + R V++RD K NIL+D R
Sbjct: 132 EKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG-------------- 177
Query: 292 FFNNMLFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTS-RS 347
AKL DFG L D P D GT Y+ PE++ + +
Sbjct: 178 ----------CAKLIDFGSGALLHDEPYTDFD-------GTRVYSPPEWISRHQYHALPA 220
Query: 348 DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG 407
V+S G++L +M+ G ++++ E L HF
Sbjct: 221 TVWSLGILLYDMVCGDIPFERDQEILEAEL------------------------HFPAHV 256
Query: 408 AQKAAQLAAHCLSRDPKARPLMSEVV 433
+ L CL+ P +RP + E++
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 116/310 (37%), Gaps = 67/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 117
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+++ D K +N L+ + ML KL DFG+A
Sbjct: 174 HG---IVHSDLKPANFLI--------------------VDGML------KLIDFGIANQM 204
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSRSDVYSFGVVLLEMLTGR 363
+ V +GT Y PE + ++ +SDV+S G +L M G+
Sbjct: 205 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
+ + + + + +IDP E F + + CL RDP
Sbjct: 265 TPFQQ---------------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 424 KARPLMSEVV 433
K R + E++
Sbjct: 310 KQRISIPELL 319
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 52/240 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH--DGLQGHKEWLAEVNFLGDLVH 194
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 62 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 195 LNLVKL-------IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
N++ + + Y E +V + M S + + S PL +
Sbjct: 113 DNIIAIKDILRPTVPYG-EFKSVYVVLDLM--ESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
GL ++H VI+RD K SN+L++ ++ K+ D
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVN-------------------------ENCELKIGD 201
Query: 308 FGLAKD--GPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEMLTGRR 364
FG+A+ + + T + T Y APE +++ H T D++S G + EML R+
Sbjct: 202 FGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 48/236 (20%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLG 190
F ES LG G V++ ++ GT KP L V KT++ ++ E+ L
Sbjct: 55 FEVESELGRGATSIVYR--CKQKGTQ--KP-YALKVLKKTVDKKIVR------TEIGVLL 103
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK--- 247
L H N++KL + LV E + G L + + + +S R A A K
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY---YSERD--AADAVKQIL 158
Query: 248 -GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+A+LHE +++RD K N LL A A D K++
Sbjct: 159 EAVAYLHENG---IVHRDLKPEN-LLYATPAP---------------------DAPLKIA 193
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGL+K + + V GT GY APE + D++S G++ +L G
Sbjct: 194 DFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 142
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 174
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 175 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 89/238 (37%), Gaps = 47/238 (19%)
Query: 129 RNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNF 188
+ F +LG G F VF + TG A+K + E+
Sbjct: 9 KTFIFMEVLGSGAFSEVF---------LVKQRLTGKLFALKCIKKSPAFRDSSLENEIAV 59
Query: 189 LGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAA 246
L + H N+V L LV + + G L + + R + S+ ++ L A
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL- 305
K +LHE +++RD K N+L L + N+K+
Sbjct: 120 K---YLHENG---IVHRDLKPENLL------------------------YLTPEENSKIM 149
Query: 306 -SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFGL+K G + + GT GY APE + + D +S GV+ +L G
Sbjct: 150 ITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 171
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 171
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 172 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 34 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 84
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 85 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 142
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 143 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 174
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 175 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 91/250 (36%), Gaps = 77/250 (30%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
LLG GGFG V+ G ++ L VA+K + D + E ++V L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 196 N--------LVKLIGYCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 236
+++L+ + D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + G V++RD K NIL+D R E
Sbjct: 119 VLEAVRHCHNCG-----------VLHRDIKDENILIDLNRGE------------------ 149
Query: 297 LFQDYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSF 352
KL DFG L KD V T GT Y+ PE++ RS V+S
Sbjct: 150 ------LKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 353 GVVLLEMLTG 362
G++L +M+ G
Sbjct: 197 GILLYDMVCG 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 36 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 86
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 87 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 144
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 145 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 176
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 177 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 31 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 81
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 82 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 139
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 140 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 171
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 172 TDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 171 TDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 98/244 (40%), Gaps = 57/244 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG GG G VF V VA+K + Q K L E+ + L H N
Sbjct: 19 LGCGGNGLVFSA---------VDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 197 LVKL--------------IGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
+VK+ +G E + +V E+M L N L + L L R+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPL-LEEHARL-FM 126
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
+GL ++H V++RD K +N LF N +D
Sbjct: 127 YQLLRGLKYIHSAN---VLHRDLKPAN---------------------LFINT---EDLV 159
Query: 303 AKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMT-GHLTSRSDVYSFGVVLLEM 359
K+ DFGLA+ D K H+S ++ T Y +P +++ + T D+++ G + EM
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 360 LTGR 363
LTG+
Sbjct: 219 LTGK 222
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 30 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 80
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 81 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 139 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 170
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 171 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 15 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 65
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 66 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 123
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 124 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 155
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 156 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN----AKLSD 307
L E ++ + + + S I+ V A ++ ++ L N+LF D N K+ D
Sbjct: 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIID 152
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMD 367
FG A+ P D + T T YAAPE + D++S GV+L ML+G+
Sbjct: 153 FGFARLKPP-DNQPLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ---- 206
Query: 368 KNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKG------AQKAAQLAAHCLSR 421
P H+ + ++ + G FS +G +Q+A L L+
Sbjct: 207 --VPFQSHDRSLTCTSAVEIMKKIKK-------GDFSFEGEAWKNVSQEAKDLIQGLLTV 257
Query: 422 DPKARPLMS 430
DP R MS
Sbjct: 258 DPNKRLKMS 266
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 93/248 (37%), Gaps = 53/248 (21%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGH--- 179
+++ R+ +P +G G +G V + V TG VA+K L + Q
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKL-YRPFQSELFA 68
Query: 180 KEWLAEVNFLGDLVHLNLVKLIGYCIED---DQRLLVYEFMPRGSLENHLFRRSLPLPWS 236
K E+ L + H N++ L+ D D Y MP + + L
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ KGL ++H +I+RD K N+ ++
Sbjct: 129 RIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVN----------------------- 162
Query: 297 LFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVV 355
+D K+ DFGLA+ V TR Y APE ++ T D++S G +
Sbjct: 163 --EDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCI 215
Query: 356 LLEMLTGR 363
+ EM+TG+
Sbjct: 216 MAEMITGK 223
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 97/264 (36%), Gaps = 68/264 (25%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 248 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 276
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 277 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 334 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 374
Query: 410 KAAQLAAHCLSRDPKARPLMSEVV 433
KA L L DPKAR E +
Sbjct: 375 KALDLVKKLLVVDPKARFTTEEAL 398
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 25/178 (14%)
Query: 119 FTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG 178
F ++L R +L EGGF V++ G+G A+K L + +
Sbjct: 18 FVGQTVELGELRLRVRRVLAEGGFAFVYEAQ---------DVGSGREYALKRLLSNEEEK 68
Query: 179 HKEWLAEVNFLGDLV-HLNLVKL-----IGYCIED--DQRLLVYEFMPRGSLENHLFRRS 230
++ + EV F+ L H N+V+ IG D L+ + +G L L +
Sbjct: 69 NRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME 128
Query: 231 L--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFC 286
PL +KI + + +H + + P+I+RD K N+LL N G C
Sbjct: 129 SRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLS-----NQGTIKLC 180
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 43/237 (18%)
Query: 130 NFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLN--HDGLQGHKEWLA-EV 186
+F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 33 DFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRER 83
Query: 187 NFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIALGA 245
+ + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 84 DVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 141
Query: 246 AKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKL 305
L +LH + +I+RD K NILL+ +D + ++
Sbjct: 142 VSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHIQI 173
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 174 TDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 262 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 290
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 291 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 348 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 388
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 389 KALDLVKKLLVVDPKAR 405
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 86/211 (40%), Gaps = 51/211 (24%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN---LVKLIGYCIEDDQRL-LVYEFM 217
TG A+K L+ + KE +N L +N LVKL + +D+ L +V E+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYA 123
Query: 218 PRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
P G + +HL R S P +I L +LH +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMID- 175
Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYG 331
Q K++DFGLAK V R + GT
Sbjct: 176 ------------------------QQGYIKVTDFGLAK--------RVKGRTWXLCGTPE 203
Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
Y APE +++ D ++ GV++ EM G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%), Gaps = 31/179 (17%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIEDDQRLLV-YEFMPRGSLENHLFRRSLPLPWSIRMKIAL 243
E + + L H VKL + +DD++L + G L ++ R+ +
Sbjct: 80 ERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA 137
Query: 244 GAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA 303
L +LH + +I+RD K NILL+ +D +
Sbjct: 138 EIVSALEYLHGKG---IIHRDLKPENILLN-------------------------EDMHI 169
Query: 304 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+++DFG AK K + +GT Y +PE + SD+++ G ++ +++ G
Sbjct: 170 QITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q K++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 179 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 210
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 211 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 59/240 (24%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G G FG VF+ + E+ VA+K + LQ + E+ + + H
Sbjct: 47 VIGNGSFGVVFQAKLVESD----------EVAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 196 NLVKLIGYCIEDDQRL------LVYEFMP----RGSLENHLFRRSLPLPWSIRMKIAL-G 244
N+V L + + + LV E++P R S ++++P+ + +K+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYMYQ 149
Query: 245 AAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAK 304
+ LA++H + +RD K N+LLD G+ K
Sbjct: 150 LLRSLAYIHSIG---ICHRDIKPQNLLLDPPS-------------GVL-----------K 182
Query: 305 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVLLEMLTGR 363
L DFG AK G+ + + + Y APE + + T+ D++S G V+ E++ G+
Sbjct: 183 LIDFGSAKILIAGEP---NVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 95
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 150
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 151 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 182
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 183 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 122 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 150
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 151 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 207
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 208 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 248
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 249 KALDLVKKLLVVDPKAR 265
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 129 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 157
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 158 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 214
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 215 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 255
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 256 KALDLVKKLLVVDPKAR 272
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 151
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 152 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 209 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 250 KALDLVKKLLVVDPKAR 266
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 151
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 152 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 209 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 250 KALDLVKKLLVVDPKAR 266
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 95/257 (36%), Gaps = 68/257 (26%)
Query: 184 AEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSL-----ENHLFRRSLPLPWSIR 238
E+ L L H ++K+ + + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 239 MKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLF 298
M +A+ +LHE +I+RD K N+LL +
Sbjct: 123 MLLAV------QYLHENG---IIHRDLKPENVLLSSQE---------------------- 151
Query: 299 QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM---TGHLTSRSDVYSFGVV 355
+D K++DFG +K E T + + GT Y APE ++ T D +S GV+
Sbjct: 152 EDCLIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 208
Query: 356 LLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSI------KGAQ 409
L L+G P E R L D G ++ + ++
Sbjct: 209 LFICLSG-------------------YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSE 249
Query: 410 KAAQLAAHCLSRDPKAR 426
KA L L DPKAR
Sbjct: 250 KALDLVKKLLVVDPKAR 266
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 34/118 (28%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+GL ++H +I+RD K SN+ ++ +D K+
Sbjct: 136 RGLKYIHSA---DIIHRDLKPSNLAVN-------------------------EDCELKIL 167
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVLLEMLTGR 363
DF LA+ + +V+TR Y APE ++ H D++S G ++ E+LTGR
Sbjct: 168 DFYLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G G FG V E G VK + K L VNF
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q K++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIKVADFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 86/230 (37%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
T + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 RVKGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 40/167 (23%)
Query: 208 DQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
D+ LV+E M GS+ +H+ +R L S+ + A L FLH + + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAHRDL 137
Query: 266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP-EGDKTHVST 324
K NIL + Q K+ DFGL GD + +ST
Sbjct: 138 KPENILCEHPN----------------------QVSPVKICDFGLGSGIKLNGDCSPIST 175
Query: 325 RVM----GTYGYAAPEYV-----MTGHLTSRSDVYSFGVVLLEMLTG 362
+ G+ Y APE V R D++S GV+L +L+G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E G VK + K L VNF
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 95
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 96 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 152
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 153 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 182
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 183 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 38/134 (28%)
Query: 237 IRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNM 296
+ + I + A+ + FLH + +++RD K SNI FF
Sbjct: 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNI---------------------FFT-- 198
Query: 297 LFQDYNAKLSDFGL--AKDGPEGDKTHVSTR--------VMGTYGYAAPEYVMTGHLTSR 346
D K+ DFGL A D E ++T ++ +GT Y +PE + + + +
Sbjct: 199 --MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHK 256
Query: 347 SDVYSFGVVLLEML 360
D++S G++L E+L
Sbjct: 257 VDIFSLGLILFELL 270
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 115/310 (37%), Gaps = 67/310 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
+G GG VF+ E+ +K V ++ ++ L ++ +A +N L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIK-----YVNLEEADNQTLDSYRNEIAYLNKLQQHSD-K 117
Query: 197 LVKLIGYCIEDDQRLLVYEFMPRGSLE-NHLFRRSLPL-PWSIRMKIALGAAKGLAFLHE 254
+++L Y I D +Y M G+++ N ++ + PW R + + +H+
Sbjct: 118 IIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ 173
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+++ D K +N L+ + ML KL DFG+A
Sbjct: 174 HG---IVHSDLKPANFLI--------------------VDGML------KLIDFGIANQM 204
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYV-----------MTGHLTSRSDVYSFGVVLLEMLTGR 363
+ V +G Y PE + ++ +SDV+S G +L M G+
Sbjct: 205 QPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 364 RSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDP 423
+ + + + + +IDP E F + + CL RDP
Sbjct: 265 TPFQQ---------------IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 424 KARPLMSEVV 433
K R + E++
Sbjct: 310 KQRISIPELL 319
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 89/228 (39%), Gaps = 39/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
+G+G F V + VK TG A K +N L H++ E L H
Sbjct: 12 IGKGAFSVVRRC---------VKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLH 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ V++RD K N+LL A + + KL+DFGLA +
Sbjct: 119 CHQMGVVHRDLKPENLLL-ASKCKGAA---------------------VKLADFGLAIE- 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+GD+ GT GY +PE + D+++ GV+L +L G
Sbjct: 156 VQGDQ-QAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 86/230 (37%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 88
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++P G + +HL R S P +I L +L
Sbjct: 89 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 143
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 144 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 175
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
T + GT Y APE +++ D ++ GV++ EM G
Sbjct: 176 RVKGRTWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 51/211 (24%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN---LVKLIGYCIEDDQRL-LVYEFM 217
TG A+K L+ + KE +N L +N LVKL + +D+ L +V E+
Sbjct: 65 TGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL-EFSFKDNSNLYMVMEYA 123
Query: 218 PRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDA 274
P G + +HL R S P +I L +LH +IYRD K N+++D
Sbjct: 124 PGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHS---LDLIYRDLKPENLMID- 175
Query: 275 VRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYG 331
Q +++DFGLAK V R + GT
Sbjct: 176 ------------------------QQGYIQVTDFGLAK--------RVKGRTWXLCGTPE 203
Query: 332 YAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
Y APE +++ D ++ GV++ EM G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 86/233 (36%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q K++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 39/237 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLAEVNFLGD 191
LGEG FG V + + G G VAVK + + + + + L +N
Sbjct: 22 LGEGAFGKVVECIDHKAG--------GRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDP 73
Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
V+++ + +V+E + + + LP K+A K + F
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY------NAKL 305
LH + + D K NIL V+++ Y +N + +D + K+
Sbjct: 134 LHSNK---LTHTDLKPENILF--VQSD----------YTEAYNPKIKRDERTLINPDIKV 178
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFG A E T VSTR Y APE ++ + DV+S G +L+E G
Sbjct: 179 VDFGSATYDDEHHSTLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 48/173 (27%)
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q K++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIKVADFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 54/259 (20%)
Query: 209 QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA----ERPVI-YR 263
Q L+ ++ GSL ++L +S L +K+A + GL LH E +P I +R
Sbjct: 109 QLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 264 DFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA----KDGPEGDK 319
D K+ NIL+ K G C ++D GLA D E D
Sbjct: 167 DLKSKNILVK--------KNGTCC-----------------IADLGLAVKFISDTNEVD- 200
Query: 320 THVSTRVMGTYGYAAPEYVMTG----HLTS--RSDVYSFGVVLLEMLTGRRSMD----KN 369
+TRV GT Y PE + H S +D+YSFG++L E+ RR + +
Sbjct: 201 IPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEE 257
Query: 370 RPNGEHNLVEWARPHLGERRRFYRL--IDPRLEGHFSI-KGAQKAAQLAAHCLSRDPKAR 426
H+LV + P + R + + P +S + ++ +L C + +P +R
Sbjct: 258 YQLPYHDLVP-SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
Query: 427 PLMSEVVEALKPLPNLKDM 445
V + L + +D+
Sbjct: 317 LTALRVKKTLAKMSESQDI 335
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 38/205 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
TG AVK + + + + E+ L +V L G E + E + GS
Sbjct: 96 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 150
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
L L ++ LP + A +GL +LH R +++ D K N+LL +
Sbjct: 151 L-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS------- 199
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
A L DFG L DG G + GT + APE
Sbjct: 200 -----------------DGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPEV 241
Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTG 362
VM ++ D++S ++L ML G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 84/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 160
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 161 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 190
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 114/313 (36%), Gaps = 75/313 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 13 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + +L +
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-----------SLTEDEATQ 112
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
FL + +LD V +Y ++ L N++ D N KL
Sbjct: 113 FLKQ----------------ILDGV---HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKL 153
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRS 365
DFG+A G++ + GT + APE V L +D++S GV+ +L+G
Sbjct: 154 IDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG--- 207
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSIKGAQKAAQLAAHCLSR 421
A P LGE ++ ++ + + ++ A L +
Sbjct: 208 ---------------ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVK 252
Query: 422 DPKARPLMSEVVE 434
DPK R +++ +E
Sbjct: 253 DPKRRMTIAQSLE 265
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 38/205 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
TG AVK + + + + E+ L +V L G E + E + GS
Sbjct: 82 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
L L ++ LP + A +GL +LH R +++ D K N+LL +
Sbjct: 137 L-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS------- 185
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
A L DFG L DG G + GT + APE
Sbjct: 186 -----------------DGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPEV 227
Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTG 362
VM ++ D++S ++L ML G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 84/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 84/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 111/308 (36%), Gaps = 65/308 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 20 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + L + G+
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 129
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH + + + D K NI+L N KL DFG+
Sbjct: 130 YLHS---KRIAHFDLKPENIMLLDKNVPNP---------------------RIKLIDFGI 165
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
A G++ + GT + APE V L +D++S GV+ +L+G
Sbjct: 166 AHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------- 214
Query: 371 PNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
A P LGE ++ ++ + + ++ A L +DPK R
Sbjct: 215 ----------ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 264
Query: 427 PLMSEVVE 434
+++ +E
Sbjct: 265 MXIAQSLE 272
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 49/235 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEW---LAEVNFLGDLV 193
+G+G FG V +++N T + A+K +N E E+ + L
Sbjct: 23 IGKGSFGKV--CIVQKNDTKKM-------YAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 194 HLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFL 252
H LV L Y +D++ + +V + + G L HL + ++++ I L +L
Sbjct: 74 HPFLVNL-WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYL 131
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
+ +I+RD K NILLD +G + ++DF +A
Sbjct: 132 QNQR---IIHRDMKPDNILLDE-----HG--------------------HVHITDFNIAA 163
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS---DVYSFGVVLLEMLTGRR 364
P +T ++T + GT Y APE + S D +S GV E+L GRR
Sbjct: 164 MLPR--ETQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 87/230 (37%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 178
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 179 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 210
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
T + GT Y APE +++ D ++ GV++ EM G
Sbjct: 211 RVKGATWT-----LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 77/205 (37%), Gaps = 38/205 (18%)
Query: 162 TGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGS 221
TG AVK + + + + E+ L +V L G E + E + GS
Sbjct: 98 TGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 152
Query: 222 LENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYG 281
L L ++ LP + A +GL +LH R +++ D K N+LL +
Sbjct: 153 L-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSS------- 201
Query: 282 KFGFCIYYGLFFNNMLFQDYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEY 337
A L DFG L DG G + GT + APE
Sbjct: 202 -----------------DGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPEV 243
Query: 338 VMTGHLTSRSDVYSFGVVLLEMLTG 362
VM ++ D++S ++L ML G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 111/308 (36%), Gaps = 65/308 (21%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 34 LGSGQFAIVRKCR---------QKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++ H N++ L +L+ E + G L + L + L + G+
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVH 143
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
+LH + + + D K NI+L N KL DFG+
Sbjct: 144 YLHS---KRIAHFDLKPENIMLLDKNVPNP---------------------RIKLIDFGI 179
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNR 370
A G++ + GT + APE V L +D++S GV+ +L+G
Sbjct: 180 AHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-------- 228
Query: 371 PNGEHNLVEWARPHLGERRR----FYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKAR 426
A P LGE ++ ++ + + ++ A L +DPK R
Sbjct: 229 ----------ASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
Query: 427 PLMSEVVE 434
+++ +E
Sbjct: 279 MXIAQSLE 286
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 83/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E+ P G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+++D Q K++DFG AK
Sbjct: 160 --LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 91/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHK------EWLAEVNFLG 190
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 84/233 (36%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
+ + + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q K++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 94/247 (38%), Gaps = 45/247 (18%)
Query: 124 LKLATRNFRPESL------LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQ 177
+ L T N +S+ LG+G F V + VK G A K +N L
Sbjct: 11 VDLGTENLYFQSMYQLFEELGKGAFSVVRRC---------VKVLAGQEYAAKIINTKKLS 61
Query: 178 G--HKEWLAEVNFLGDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 235
H++ E L H N+V+L E+ L+++ + G L + R +
Sbjct: 62 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----Y 117
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + L + + V++RD K N+LL +
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASK-------------------- 157
Query: 296 MLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVV 355
+ KL+DFGLA + EG++ GT GY +PE + D+++ GV+
Sbjct: 158 --LKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVI 213
Query: 356 LLEMLTG 362
L +L G
Sbjct: 214 LYILLVG 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 84/233 (36%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
+ + + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q K++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 74/206 (35%), Gaps = 53/206 (25%)
Query: 198 VKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLP------WSIRMKIALGAAKGLA 250
+ + Y +DD L LV ++ G L L + LP + M IA+ + L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGL 310
++H RD K NIL+D FG C+ L
Sbjct: 196 YVH---------RDIKPDNILMDMNGHIRLADFGSCL---------------------KL 225
Query: 311 AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTSRSDVYSFGVVLLEMLTGRRS 365
+DG T S+ +GT Y +PE + G D +S GV + EML G
Sbjct: 226 MEDG-----TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE-- 278
Query: 366 MDKNRPNGEHNLVEWARPHLGERRRF 391
P +LVE + + RF
Sbjct: 279 ----TPFYAESLVETYGKIMNHKERF 300
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 86/233 (36%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E+ P G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLMID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN-YGKFGFCIYYG 290
PLP M L A L FLHE + + D K NIL E Y + C
Sbjct: 121 PLPHVRHMAYQLCHA--LRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC---- 171
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
++ + +++DFG A E T V+TR Y PE ++ DV+
Sbjct: 172 ---EEKSVKNTSIRVADFGSATFDHEHHTTIVATR-----HYRPPEVILELGWAQPCDVW 223
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEH 375
S G +L E G ++ + N EH
Sbjct: 224 SIGCILFEYYRG-FTLFQTHENREH 247
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN-YGKFGFCIYYG 290
PLP M L A L FLHE + + D K NIL E Y + C
Sbjct: 130 PLPHVRHMAYQLCHA--LRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC---- 180
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
++ + +++DFG A E T V+TR Y PE ++ DV+
Sbjct: 181 ---EEKSVKNTSIRVADFGSATFDHEHHTTIVATR-----HYRPPEVILELGWAQPCDVW 232
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEH 375
S G +L E G ++ + N EH
Sbjct: 233 SIGCILFEYYRG-FTLFQTHENREH 256
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DATLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S GV++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DATLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S GV++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 103
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 104 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 158
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 159 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 190
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 111/308 (36%), Gaps = 63/308 (20%)
Query: 136 LLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHL 195
++G+G F V + E G + + K + GL ++ E + L H
Sbjct: 31 VIGKGAFSVVRRCINRETGQ---QFAVKIVDVAKFTSSPGLST-EDLKREASICHMLKHP 86
Query: 196 NLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALGAAKGLAFL 252
++V+L+ D +V+EFM L + +R+ ++ + L +
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H+ +I+RD K N+LL + EN KL DFG+A
Sbjct: 147 HDNN---IIHRDVKPENVLLAS--KENSAP--------------------VKLGDFGVAI 181
Query: 313 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPN 372
G+ V+ +GT + APE V DV+ GV+L +L+G
Sbjct: 182 Q--LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG---------- 229
Query: 373 GEHNLVEWARPHLGERRRFYRLI-------DPRLEGHFSIKGAQKAAQLAAHCLSRDPKA 425
P G + R + I +PR H S + A L L DP
Sbjct: 230 --------CLPFYGTKERLFEGIIKGKYKMNPRQWSHIS----ESAKDLVRRMLMLDPAE 277
Query: 426 RPLMSEVV 433
R + E +
Sbjct: 278 RITVYEAL 285
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 19/145 (13%)
Query: 232 PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAEN-YGKFGFCIYYG 290
PLP M L A L FLHE + + D K NIL E Y + C
Sbjct: 153 PLPHVRHMAYQLCHA--LRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC---- 203
Query: 291 LFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVY 350
++ + +++DFG A E T V+TR Y PE ++ DV+
Sbjct: 204 ---EEKSVKNTSIRVADFGSATFDHEHHTTIVATR-----HYRPPEVILELGWAQPCDVW 255
Query: 351 SFGVVLLEMLTGRRSMDKNRPNGEH 375
S G +L E G ++ + N EH
Sbjct: 256 SIGCILFEYYRG-FTLFQTHENREH 279
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 44/254 (17%)
Query: 135 SLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWL-AEVNFL---- 189
S LGEG FG V + G G VA+K + ++ +KE E+N L
Sbjct: 39 STLGEGTFGRVVQCVDHRRG--------GARVALKIIK--NVEKYKEAARLEINVLEKIN 88
Query: 190 -GDLVHLNL-VKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAK 247
D + NL V++ + + +E + + + LP P +A +
Sbjct: 89 EKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA---- 303
+ FLH+ + + D K NIL V ++ Y L +N +D +
Sbjct: 149 AVKFLHDNK---LTHTDLKPENILF--VNSD----------YELTYNLEKKRDERSVKST 193
Query: 304 --KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT 361
++ DFG A E T VSTR Y APE ++ + DV+S G ++ E
Sbjct: 194 AVRVVDFGSATFDHEHHSTIVSTR-----HYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 362 GRRSMDKNRPNGEH 375
G ++ + N EH
Sbjct: 249 G-FTLFQTHDNREH 261
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 39/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILESVNH 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+++RD K N+LL A +++ KL+DFGLA +
Sbjct: 119 CHLNGIVHRDLKPENLLL-ASKSKGAA---------------------VKLADFGLAIE- 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+GD+ GT GY +PE + D+++ GV+L +L G
Sbjct: 156 VQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 81/230 (35%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-------P 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
+ + + +D+ L +V E+ P G + +HL R R A +LH
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 160
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+++D Q K++DFG AK
Sbjct: 161 --LDLIYRDLKPENLMID-------------------------QQGYIKVTDFGFAK--- 190
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 191 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 90/228 (39%), Gaps = 39/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRRC---------MKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIQQILESVNH 118
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+++RD K N+LL A +++ KL+DFGLA +
Sbjct: 119 CHLNGIVHRDLKPENLLL-ASKSKGAA---------------------VKLADFGLAIE- 155
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+GD+ GT GY +PE + D+++ GV+L +L G
Sbjct: 156 VQGDQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 109/288 (37%), Gaps = 65/288 (22%)
Query: 161 GTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLNLVKLIGYCIEDD--QRLLVYEFMP 218
G + V V + + +++ E L H N++ ++G C L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 219 RGSLENHLFR-RSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD-FKTSNILLDAVR 276
GSL N L + + S +K AL A+G+AFLH P+I R + ++++D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVMID--- 147
Query: 277 AENYGKFGFCIYYGLFFNNMLFQDYNAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAA 334
+D A++S D + P M + A
Sbjct: 148 ----------------------EDMTARISMADVKFSFQSPGR---------MYAPAWVA 176
Query: 335 PEYVMTG-HLTSR--SDVYSFGVVLLEMLTGRRSMD--KNRPNGEHNLVEWARPHLGERR 389
PE + T+R +D++SF V+L E++T N G +E RP
Sbjct: 177 PEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP------ 230
Query: 390 RFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALK 437
I P + H S +L C++ DP RP +V L+
Sbjct: 231 ----TIPPGISPHVS--------KLMKICMNEDPAKRPKFDMIVPILE 266
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 40/167 (23%)
Query: 208 DQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDF 265
D+ LV+E M GS+ +H+ +R L S+ + A L FLH + + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNKG---IAHRDL 137
Query: 266 KTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP-EGDKTHVST 324
K NIL + Q K+ DF L GD + +ST
Sbjct: 138 KPENILCEHPN----------------------QVSPVKICDFDLGSGIKLNGDCSPIST 175
Query: 325 RVM----GTYGYAAPEYV-----MTGHLTSRSDVYSFGVVLLEMLTG 362
+ G+ Y APE V R D++S GV+L +L+G
Sbjct: 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 92/237 (38%), Gaps = 53/237 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA------EVNFLG 190
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 191 DLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLA 250
++H N++ L +L+ E + G L + L ++ +L + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-----------SLSEEEATS 119
Query: 251 FLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNA-----KL 305
F+ + +LD V NY ++ L N++ D N KL
Sbjct: 120 FIKQ----------------ILDGV---NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL 160
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFGLA + +G + + GT + APE V L +D++S GV+ +L+G
Sbjct: 161 IDFGLAHEIEDGVEF---KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 40/162 (24%)
Query: 208 DQRLLVYEFMPRGSL---ENHLF----RRSLPLPWSIRMKIALGAAKGLAFLHEEAERPV 260
D+ ++YE+M S+ + + F + +P + I +++H E + +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNI 173
Query: 261 IYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPEGDKT 320
+RD K SNIL+D ++ KLSDFG ++ DK
Sbjct: 174 CHRDVKPSNILMD-------------------------KNGRVKLSDFGESE--YMVDKK 206
Query: 321 HVSTRVMGTYGYAAPEYVM--TGHLTSRSDVYSFGVVLLEML 360
+R GTY + PE+ + + ++ D++S G+ L M
Sbjct: 207 IKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 89/233 (38%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 89
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 90 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 144
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q Y +++DFG AK
Sbjct: 145 HS---LDLIYRDLKPENLLIDE------------------------QGY-IQVTDFGFAK 176
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 177 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 97
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 98 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 154
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 155 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 184
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 185 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS- 159
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 160 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 189
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+++D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLIID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 170
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 171 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 94/259 (36%), Gaps = 66/259 (25%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHDGLQGHKE 181
+++L +F ++G G FG V A VK T A+K LN + E
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTERIYAMKILNKWEMLKRAE 133
Query: 182 WLA-----EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW 235
+V GD + + Y +D+ L LV ++ G L L + LP
Sbjct: 134 TACFREERDVLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 190
Query: 236 SI------RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
+ M +A+ + L ++H RD K N+LLD FG C+
Sbjct: 191 DMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCL-- 239
Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLT 344
K++D D T S+ +GT Y +PE + G
Sbjct: 240 --------------KMND----------DGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 275
Query: 345 SRSDVYSFGVVLLEMLTGR 363
D +S GV + EML G
Sbjct: 276 PECDWWSLGVCMYEMLYGE 294
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 85/230 (36%), Gaps = 48/230 (20%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 123
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEE 255
LVKL + +D+ L +V E++ G + +HL R R A +LH
Sbjct: 124 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS- 180
Query: 256 AERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGP 315
+IYRD K N+L+D Q +++DFG AK
Sbjct: 181 --LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK--- 210
Query: 316 EGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 211 -----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 88/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ +M G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 86/233 (36%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V E G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 50/131 (38%), Gaps = 23/131 (17%)
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLD---------AVRAENYGKFGFCIYYGL 291
I L + L L+ + + + D K NILLD VR GK
Sbjct: 139 IKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGK--------- 189
Query: 292 FFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYS 351
Q Y K + L G K+ ++ T Y APE ++ SD++S
Sbjct: 190 -----KIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWS 244
Query: 352 FGVVLLEMLTG 362
FG VL E+ TG
Sbjct: 245 FGCVLAELYTG 255
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DATLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 94/259 (36%), Gaps = 66/259 (25%)
Query: 123 DLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVK-PGTGLTVAVKTLNHDGLQGHKE 181
+++L +F ++G G FG V A VK T A+K LN + E
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEV----------AVVKMKNTERIYAMKILNKWEMLKRAE 117
Query: 182 WLA-----EVNFLGDLVHLNLVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW 235
+V GD + + Y +D+ L LV ++ G L L + LP
Sbjct: 118 TACFREERDVLVNGDC---QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPE 174
Query: 236 SI------RMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYY 289
+ M +A+ + L ++H RD K N+LLD FG C+
Sbjct: 175 DMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCL-- 223
Query: 290 GLFFNNMLFQDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLT 344
K++D D T S+ +GT Y +PE + G
Sbjct: 224 --------------KMND----------DGTVQSSVAVGTPDYISPEILQAMEDGMGKYG 259
Query: 345 SRSDVYSFGVVLLEMLTGR 363
D +S GV + EML G
Sbjct: 260 PECDWWSLGVCMYEMLYGE 278
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DATLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DATLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 73/321 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ GL ++H +++RD K +N+L+ +D
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-------------------------RD 161
Query: 301 YNAKLSDFGLAKD---GPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
KL+DFGLA+ RV+ T Y PE ++ D++ G ++
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEW----ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
EM T M N + L+ P + Y L + +LE +KG ++
Sbjct: 221 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKV 276
Query: 413 QLAAHCLSRDPKARPLMSEVV 433
+ RDP A L+ +++
Sbjct: 277 KDRLKAYVRDPYALDLIDKLL 297
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 44/107 (41%), Gaps = 35/107 (32%)
Query: 260 VIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFG---LAKDGPE 316
V++RD K NIL+D R E KL DFG L KD
Sbjct: 178 VLHRDIKDENILIDLNRGE------------------------LKLIDFGSGALLKDT-- 211
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRS-DVYSFGVVLLEMLTG 362
V T GT Y+ PE++ RS V+S G++L +M+ G
Sbjct: 212 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 171
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ G + V+ Y Y APE ++ D++S G ++ EM+ G
Sbjct: 172 FGLARTA--GTSFMMVPFVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 50/185 (27%)
Query: 247 KGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLS 306
+G+ +LH+ +++ D K NILL ++ Y L + K+
Sbjct: 142 EGVYYLHQ---NNIVHLDLKPQNILLSSI-------------YPLG---------DIKIV 176
Query: 307 DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSM 366
DFG+++ + +MGT Y APE + +T+ +D+++ G++ +LT
Sbjct: 177 DFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH---- 229
Query: 367 DKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAA----HCLSRD 422
P +GE + L ++ +S + +QLA L ++
Sbjct: 230 --------------TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKN 275
Query: 423 PKARP 427
P+ RP
Sbjct: 276 PEKRP 280
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT Y AP +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 90/237 (37%), Gaps = 39/237 (16%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNH-----DGLQGHKEWLAEVNFLGD 191
LGEG FG V + + G G VAVK + + + + + L +N
Sbjct: 22 LGEGAFGKVVECIDHKAG--------GRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDP 73
Query: 192 LVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAF 251
V+++ + +V+E + + + LP K+A K + F
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNF 133
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDY------NAKL 305
LH + + D K NIL V+++ Y +N + +D + K+
Sbjct: 134 LHSNK---LTHTDLKPENILF--VQSD----------YTEAYNPKIKRDERTLINPDIKV 178
Query: 306 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
DFG A E T V R Y APE ++ + DV+S G +L+E G
Sbjct: 179 VDFGSATYDDEHHSTLVXXR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 88/228 (38%), Gaps = 39/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + VK A K +N L H++ E L H
Sbjct: 39 LGKGAFSVVRRC---------VKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ LV++ + G L + R + + + L ++
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADASHCIHQILESVNH 145
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ +++RD K N+LL A + + KL+DFGLA +
Sbjct: 146 IHQHDIVHRDLKPENLLL-ASKCKGAA---------------------VKLADFGLAIE- 182
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
+G++ GT GY +PE + D+++ GV+L +L G
Sbjct: 183 VQGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 31/116 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
FGLA+ G + V+ Y Y APE ++ D++S G ++ EM+ +
Sbjct: 170 FGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 73/321 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 25 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 192 LVHLNLVKLIGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 128
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ GL ++H +++RD K +N+L+ +D
Sbjct: 129 VMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-------------------------RD 160
Query: 301 YNAKLSDFGLAKD---GPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
KL+DFGLA+ RV+ T Y PE ++ D++ G ++
Sbjct: 161 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 219
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEW----ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
EM T M N + L+ P + Y L + +LE +KG ++
Sbjct: 220 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKV 275
Query: 413 QLAAHCLSRDPKARPLMSEVV 433
+ RDP A L+ +++
Sbjct: 276 KDRLKAYVRDPYALDLIDKLL 296
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 131 FRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLA-EVNFL 189
F+ E +GEG F V+ TA ++ G +A+K H H +A E+ L
Sbjct: 23 FKIEDKIGEGTFSSVYLA------TAQLQVGPEEKIALK---HLIPTSHPIRIAAELQCL 73
Query: 190 GDLVHLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSL-PLPWSIRMKIALGAAKG 248
+ V + YC + +++ MP LE+ F L L + + L K
Sbjct: 74 TVAGGQDNVMGVKYCFRKNDHVVIA--MPY--LEHESFLDILNSLSFQEVREYMLNLFKA 129
Query: 249 LAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDF 308
L +H+ +++RD K SN L + R + Y F + G D +L F
Sbjct: 130 LKRIHQFG---IVHRDVKPSNFLYNR-RLKKYALVDFGLAQGT-------HDTKIELLKF 178
Query: 309 GLAKDGPE-----------GDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSFGVVL 356
++ E + V+ R GT G+ APE + + T+ D++S GV+
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRA-GTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 357 LEMLTGR 363
L +L+GR
Sbjct: 238 LSLLSGR 244
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 73/321 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ GL ++H +++RD K +N+L+ +D
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-------------------------RD 161
Query: 301 YNAKLSDFGLAKD---GPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
KL+DFGLA+ RV+ T Y PE ++ D++ G ++
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEW----ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
EM T M N + L+ P + Y L + +LE +KG ++
Sbjct: 221 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKV 276
Query: 413 QLAAHCLSRDPKARPLMSEVV 433
+ RDP A L+ +++
Sbjct: 277 KDRLKAYVRDPYALDLIDKLL 297
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 121/321 (37%), Gaps = 73/321 (22%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKE-----WLAEVNFLGD 191
+G+G FG VFK + TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKARHRK---------TGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 192 LVHLNLVKLIGYCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 240
L H N+V LI C LV++F G L N L + +L S +
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL----SEIKR 129
Query: 241 IALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQD 300
+ GL ++H +++RD K +N+L+ +D
Sbjct: 130 VMQMLLNGLYYIHRNK---ILHRDMKAANVLIT-------------------------RD 161
Query: 301 YNAKLSDFGLAKD---GPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRSDVYSFGVVL 356
KL+DFGLA+ RV+ T Y PE ++ D++ G ++
Sbjct: 162 GVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIM 220
Query: 357 LEMLTGRRSMDKNRPNGEHNLVEW----ARPHLGERRRFYRLIDPRLEGHFSIKGAQKAA 412
EM T M N + L+ P + Y L + +LE +KG ++
Sbjct: 221 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE-KLE---LVKGQKRKV 276
Query: 413 QLAAHCLSRDPKARPLMSEVV 433
+ RDP A L+ +++
Sbjct: 277 KDRLKAYVRDPYALDLIDKLL 297
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 31/171 (18%)
Query: 194 HLNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--GAAKGLAF 251
H N++ L + +V E M G L + + R+ +S R A+ K + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEY 131
Query: 252 LHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLA 311
LH + V++RD K SNIL + + + ++ DFG A
Sbjct: 132 LHAQG---VVHRDLKPSNIL---------------------YVDESGNPESIRICDFGFA 167
Query: 312 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
K + ++ T + APE + + D++S GV+L MLTG
Sbjct: 168 KQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 207
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 208 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 325 NKLKASQ-ARDLLSKMLVIDPAKR 347
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DXTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DXTLKILD 162
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 163 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 280 NKLKASQ-ARDLLSKMLVIDPAKR 302
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 207
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 208 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 265 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 324
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 325 NKLKASQ-ARDLLSKMLVIDPAKR 347
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DXTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 170
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 171 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 288 NKLKASQ-ARDLLSKMLVIDPAKR 310
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 163
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 164 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 281 NKLKASQ-ARDLLSKMLVIDPAKR 303
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 168
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 169 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 225
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 226 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 285
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 286 NKLKASQ-ARDLLSKMLVIDPAKR 308
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 162
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 163 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 279
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 280 NKLKASQ-ARDLLSKMLVIDPAKR 302
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 163
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 164 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 220
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 221 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 280
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 281 NKLKASQ-ARDLLSKMLVIDPAKR 303
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 87/233 (37%), Gaps = 54/233 (23%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHLN 196
LG G FG V +E+G VK + K L VNF
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF------ 102
Query: 197 LVKLIGYCIEDDQRL-LVYEFMPRGSLENHLFRR---SLPLPWSIRMKIALGAAKGLAFL 252
LVKL + +D+ L +V E++ G + +HL R S P +I L +L
Sbjct: 103 LVKL-EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYL 157
Query: 253 HEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAK 312
H +IYRD K N+L+D Q +++DFG AK
Sbjct: 158 HS---LDLIYRDLKPENLLID-------------------------QQGYIQVTDFGFAK 189
Query: 313 DGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
V R + GT APE +++ D ++ GV++ EM G
Sbjct: 190 --------RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 170
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEML------T 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 171 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 227
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 228 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 287
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 288 NKLKASQ-ARDLLSKMLVIDPAKR 310
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DXTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT------ 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 57/204 (27%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DXTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLT------ 361
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+
Sbjct: 170 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 226
Query: 362 GRRSMDK-NR---------PNGEHNLVEWARPHLGERRRFYRLIDPRL---------EGH 402
GR +D+ N+ P L R ++ R ++ L P+L H
Sbjct: 227 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH 286
Query: 403 FSIKGAQKAAQLAAHCLSRDPKAR 426
+K +Q A L + L DP R
Sbjct: 287 NKLKASQ-ARDLLSKMLVIDPAKR 309
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ + T + T Y APE ++ + D++S G ++ E++ G
Sbjct: 170 FGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 34/115 (29%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
GL LHE V++RD NILL A+N + + D
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILL----ADN---------------------NDITICD 177
Query: 308 FGLAK-DGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEML 360
F LA+ D + +KTH T Y APE VM T D++S G V+ EM
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 47/115 (40%), Gaps = 34/115 (29%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
GL LHE V++RD NILL A+N + + D
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILL----ADN---------------------NDITICD 177
Query: 308 FGLAK-DGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTSRSDVYSFGVVLLEML 360
F LA+ D + +KTH T Y APE VM T D++S G V+ EM
Sbjct: 178 FNLAREDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 288 YYGLFFNNMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
++ L N++ D N K+ DFGLA G++ + GT + APE V
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEIVNYEP 193
Query: 343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPR 398
L +D++S GV+ +L+G A P LG+ ++ ++
Sbjct: 194 LGLEADMWSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYE 235
Query: 399 LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
E + + A L +DPK R + + ++
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 86/228 (37%), Gaps = 39/228 (17%)
Query: 137 LGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQG--HKEWLAEVNFLGDLVH 194
LG+G F V + VK G A +N L H++ E L H
Sbjct: 19 LGKGAFSVVRRC---------VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 195 LNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHE 254
N+V+L E+ L+++ + G L + R + + + L +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLH 125
Query: 255 EAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDG 314
+ V++R+ K N+LL + + KL+DFGLA +
Sbjct: 126 CHQMGVVHRNLKPENLLLASK----------------------LKGAAVKLADFGLAIE- 162
Query: 315 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
EG++ GT GY +PE + D+++ GV+L +L G
Sbjct: 163 VEGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 200 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 143 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 199
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 200 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 286
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 174
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ +
Sbjct: 175 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 31/116 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 169
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
FGLA+ G + V+ Y Y APE ++ D++S G ++ EM+ +
Sbjct: 170 FGLARTA--GTSFMMEPEVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 32/165 (19%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVEA--LKPLPNLKDMASS 448
+ A L +DPK R + + ++ +KP + ++S+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSA 287
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 31/116 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 163
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGR 363
FGLA+ G ++ V+ Y Y APE ++ D++S G ++ EM+ +
Sbjct: 164 FGLARTA--GTSFMMTPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 31/115 (26%)
Query: 248 GLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSD 307
G+ LH +I+RD K SNI++ + D K+ D
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKS-------------------------DCTLKILD 167
Query: 308 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTG 362
FGLA+ + T + T Y APE ++ D++S G ++ E++ G
Sbjct: 168 FGLAR---TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 37/184 (20%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 242
E+ L L H N+VKL+ + +D +V+E + +G + + PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYF 143
Query: 243 LGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYN 302
KG+ +LH + +I+RD K SN+L+ +D +
Sbjct: 144 QDLIKGIEYLHYQK---IIHRDIKPSNLLVG-------------------------EDGH 175
Query: 303 AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTSRS--DVYSFGVVLLEM 359
K++DFG++ + D +T +GT + APE + T + S DV++ GV L
Sbjct: 176 IKIADFGVSNEFKGSDALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCF 233
Query: 360 LTGR 363
+ G+
Sbjct: 234 VFGQ 237
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRR----FYRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L +DPK R + + ++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 30/141 (21%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKAR 426
+ A L +DPK R
Sbjct: 243 NTSALAKDFIRRLLVKDPKKR 263
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L +DPK R + + ++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 30/141 (21%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKAR 426
+ A L +DPK R
Sbjct: 243 NTSALAKDFIRRLLVKDPKKR 263
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 30/141 (21%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKAR 426
+ A L +DPK R
Sbjct: 243 NTSALAKDFIRRLLVKDPKKR 263
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 37/190 (19%)
Query: 185 EVNFLGDLVHLNLVKLIGYCIE--DDQRLLVYEFMPRGSLENHLFRRS-------LPLPW 235
E+ L +L H N++ L + D + L++++ F R+ + LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 236 SIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNN 295
+ + G+ +LH V++RD K +NIL+ E G+
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPER-GR------------- 170
Query: 296 MLFQDYNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTSRSDVYSF 352
K++D G A+ + P + V+ T+ Y APE ++ H T D+++
Sbjct: 171 -------VKIADMGFARLFNSPLKPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAI 222
Query: 353 GVVLLEMLTG 362
G + E+LT
Sbjct: 223 GCIFAELLTS 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 30/156 (19%)
Query: 288 YYGLFFNNMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH 342
++ L N++ D N K+ DFGLA G++ + GT + APE V
Sbjct: 137 HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEP 193
Query: 343 LTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPR 398
L +D++S GV+ +L+G A P LG+ ++ ++
Sbjct: 194 LGLEADMWSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYE 235
Query: 399 LEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
E + + A L +DPK R + + ++
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 295 NMLFQDYNA-----KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N++ D N K+ DFGLA G++ + GT + APE V L +D+
Sbjct: 144 NIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADM 200
Query: 350 YSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRF----YRLIDPRLEGHFSI 405
+S GV+ +L+G A P LG+ ++ ++ E +
Sbjct: 201 WSIGVITYILLSG------------------ASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 406 KGAQKAAQLAAHCLSRDPKARPLMSEVVE 434
+ A L +DPK R + + ++
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 45/223 (20%)
Query: 143 GCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDG-LQGHKEWLAEVNFLGDLVHLNLVKLI 201
GC+ G + A + G V +K L H G + +AE FL ++VH ++V++
Sbjct: 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145
Query: 202 GYCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEA 256
+ D+ +V E++ SL+ ++ LP + + L L++LH
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK---LPVAEAIAYLLEILPALSYLHSIG 202
Query: 257 ERPVIYRDFKTSNILLDAVRAENYGKFGFCIYYGLFFNNMLFQDYNAKLSDFGLAKDGPE 316
++Y D K NI+L + KL D G
Sbjct: 203 ---LVYNDLKPENIML--------------------------TEEQLKLIDLGAVS---- 229
Query: 317 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEM 359
+ + + GT G+ APE V TG T +D+Y+ G L +
Sbjct: 230 --RINSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 294 NNMLF----QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N+L+ +D KL+DFG AK E + + T Y Y APE + D+
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 193
Query: 350 YSFGVVLLEMLTG 362
+S GV++ +L G
Sbjct: 194 WSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 294 NNMLF----QDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDV 349
N+L+ +D KL+DFG AK E + + T Y Y APE + D+
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDM 212
Query: 350 YSFGVVLLEMLTG 362
+S GV++ +L G
Sbjct: 213 WSLGVIMYILLCG 225
>pdb|1NRK|A Chain A, Ygfz Protein
Length = 328
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 207 DDQRLL--VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD 264
DD+R+L V F R +L N LF LP + + GA L F H AER +I D
Sbjct: 115 DDERVLLGVAGFQARAALAN-LFSE---LPSKEKQVVKEGATTLLWFEHP-AERFLIVTD 169
Query: 265 FKTSNILLDAVRAE 278
T+N L D +R E
Sbjct: 170 EATANXLTDKLRGE 183
>pdb|1VLY|A Chain A, Crystal Structure Of A Putative Aminomethyltransferase
(Ygfz) From Escherichia Coli At 1.30 A Resolution
Length = 338
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 207 DDQRLL--VYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRD 264
DD+R+L V F R +L N LF LP + + GA L F H AER +I D
Sbjct: 124 DDERVLLGVAGFQARAALAN-LFSE---LPSKEKQVVKEGATTLLWFEHP-AERFLIVTD 178
Query: 265 FKTSNILLDAVRAE 278
T+N L D +R E
Sbjct: 179 EATANXLTDKLRGE 192
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,499,239
Number of Sequences: 62578
Number of extensions: 596995
Number of successful extensions: 3941
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 625
Number of HSP's that attempted gapping in prelim test: 1936
Number of HSP's gapped (non-prelim): 1382
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)