BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010434
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/297 (39%), Positives = 169/297 (56%), Gaps = 15/297 (5%)
Query: 178 KRYSYPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE--FINE 233
KR+S E+ +++F++K LG+GGFG VYKG+L G L+AVK L+ + E F E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 234 VSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIA 293
V I H N+++L GFC ++R LVY +M NGS+ + + W K Q IA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
LG+ARG+AYLH+ CD I+H D+K NILLD F V DFGLAK ++ V A R
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 204
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAI-RSSKAYFPSWVYD 412
GTIG+IAPE +S G S K+DV+G+G++LLE+ G+R ++ + WV
Sbjct: 205 GTIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
Query: 413 QLNKGG-----DLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 464
L + D++L+ + E V +L + L C Q +RP M++V+ MLEG
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 167/297 (56%), Gaps = 15/297 (5%)
Query: 178 KRYSYPEIIAVTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE--FINE 233
KR+S E+ +++F +K LG+GGFG VYKG+L G L+AVK L+ + E F E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 234 VSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIA 293
V I H N+++L GFC ++R LVY +M NGS+ + + W K Q IA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
LG+ARG+AYLH+ CD I+H D+K NILLD F V DFGLAK ++ V A R
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX-XAVR 196
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAI-RSSKAYFPSWVYD 412
G IG+IAPE +S G S K+DV+G+G++LLE+ G+R ++ + WV
Sbjct: 197 GXIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 413 QLNKGG-----DLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGS 464
L + D++L+ + E V +L + L C Q +RP M++V+ MLEG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEV--EQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 156/286 (54%), Gaps = 16/286 (5%)
Query: 188 VTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKM-LENSKFSAEEFINEVSTIGRIHHVN 244
TN+F HK +G G FG VYKG L G +A+K S EEF E+ T+ H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+V L+GFC E ++ L+Y++M NG+L RH++ + + WE+ EI +G ARG+ YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+K NILLD NF+PK++DFG++K + + +GT+GYI PE
Sbjct: 157 T---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGG-----D 419
+ G ++ KSDVY FG+VL E+ R++ + ++ W + N G D
Sbjct: 214 IK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 420 LELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSM 465
L + ES+ RK + C+ + + DRPSM VL LE ++
Sbjct: 271 PNLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 155/286 (54%), Gaps = 16/286 (5%)
Query: 188 VTNHFTHK--LGQGGFGSVYKGQLHTGRLIAVKM-LENSKFSAEEFINEVSTIGRIHHVN 244
TN+F HK +G G FG VYKG L G +A+K S EEF E+ T+ H +
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPH 96
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+V L+GFC E ++ L+Y++M NG+L RH++ + + WE+ EI +G ARG+ YLH
Sbjct: 97 LVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+K NILLD NF+PK++DFG++K + +GT+GYI PE
Sbjct: 157 T---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGG-----D 419
+ G ++ KSDVY FG+VL E+ R++ + ++ W + N G D
Sbjct: 214 IK--GRLTEKSDVYSFGVVLFEVLCA-RSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD 270
Query: 420 LELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSM 465
L + ES+ RK + C+ + + DRPSM VL LE ++
Sbjct: 271 PNLADKIRPESL--RKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 21/296 (7%)
Query: 180 YSYPEIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE-- 229
+S+ E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 230 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGW 286
F E+ + + H N+V+LLGF S+G LVY +MPNGSL DR + W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 287 EKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 346
+IA G A G+ +LH +H DIK NILLD F K+SDFGLA+ K
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 347 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYF 406
V S GT Y+APE + G ++ KSD+Y FG+VLLE+ G + +
Sbjct: 190 VMXSRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 407 PSWVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
+ D+ D + + + +S + + C+ K RP + KV ++L+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 144/296 (48%), Gaps = 21/296 (7%)
Query: 180 YSYPEIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE-- 229
+S+ E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 230 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKENKGQTFGW 286
F E+ + + H N+V+LLGF S+G LVY +MPNGS LDR + W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 126
Query: 287 EKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 346
+IA G A G+ +LH +H DIK NILLD F K+SDFGLA+ K
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 347 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYF 406
V GT Y+APE + G ++ KSD+Y FG+VLLE+ G + +
Sbjct: 184 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 407 PSWVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
+ D+ D + + + +S + + C+ K RP + KV ++L+
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 144/296 (48%), Gaps = 21/296 (7%)
Query: 180 YSYPEIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE-- 229
+S+ E+ VTN+F +K+G+GGFG VYKG ++ + K+ + EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 230 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LDRHIFPKENKGQTFGW 286
F E+ + + H N+V+LLGF S+G LVY +MPNGS LDR + W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLSW 132
Query: 287 EKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 346
+IA G A G+ +LH +H DIK NILLD F K+SDFGLA+ K
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 347 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYF 406
V GT Y+APE + G ++ KSD+Y FG+VLLE+ G + +
Sbjct: 190 VMXXRIVGTTAYMAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 407 PSWVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
+ D+ D + + + +S + + C+ K RP + KV ++L+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 21/296 (7%)
Query: 180 YSYPEIIAVTNHFT--------HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE-- 229
+S+ E+ VTN+F +K G+GGFG VYKG ++ + K+ + EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 230 --FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGW 286
F E+ + H N+V+LLGF S+G LVY + PNGSL DR + W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLSW 123
Query: 287 EKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 346
+IA G A G+ +LH +H DIK NILLD F K+SDFGLA+ K
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 347 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYF 406
V S GT Y APE + G ++ KSD+Y FG+VLLE+ G + +
Sbjct: 181 VXXSRIVGTTAYXAPEALR---GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 237
Query: 407 PSWVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
+ D+ D + + +S + C+ K RP + KV ++L+
Sbjct: 238 KEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 144/274 (52%), Gaps = 24/274 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F +KL +IA TARG+ YLH
Sbjct: 76 YSTK-PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHA---KS 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEI 428
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINN--------RDQIIEMVGRGSLSP--DLSKV 238
Query: 429 ESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
S +++ + C++ K +RPS ++L +E
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 143/274 (52%), Gaps = 24/274 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ S + A+V ++ SL H+ E K F +KL +IA TARG+ YLH
Sbjct: 88 Y-STAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHA---KS 140
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEI 428
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINN--------RDQIIEMVGRGSLSP--DLSKV 250
Query: 429 ESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
S +++ + C++ K +RPS ++L +E
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 144/274 (52%), Gaps = 24/274 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F +KL +IA TARG+ YLH
Sbjct: 88 YSTK-PQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHA---KS 140
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEI 428
S +SDVY FG+VL E M G SN+N + + + +G +++++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINN--------RDQIIEMVGRGSLSP--DLSKV 250
Query: 429 ESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
S +++ + C++ K +RPS ++L +E
Sbjct: 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 114/201 (56%), Gaps = 10/201 (4%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAE---EFINEVSTIGRIHHVNVVQ 247
+ K+G G FG+V++ + H G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+G ++ ++V E++ GSL R + K + + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
+ I+H ++K N+L+D + KV DFGL++ K + F+S + GT ++APE++
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 368 FGTVSCKSDVYGFGMVLLEMA 388
+ KSDVY FG++L E+A
Sbjct: 215 --PSNEKSDVYSFGVILWELA 233
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 10/201 (4%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAE---EFINEVSTIGRIHHVNVVQ 247
+ K+G G FG+V++ + H G +AVK+L F AE EF+ EV+ + R+ H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+G ++ ++V E++ GSL R + K + + +A A+G+ YLHN
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR- 156
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
+ I+H D+K N+L+D + KV DFGL++ K + F+ GT ++APE++
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 368 FGTVSCKSDVYGFGMVLLEMA 388
+ KSDVY FG++L E+A
Sbjct: 215 --PSNEKSDVYSFGVILWELA 233
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV+EFM +G L ++ + +G F E L + L G+AYL + C+
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLE---EACV 124
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV+EFM +G L ++ + +G F E L + L G+AYL C+
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLEEA---CV 122
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 179
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 180 SSKSDVWSFGVLMWEV 195
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 106/196 (54%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV+EFM +G L ++ + +G F E L + L G+AYL + C+
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLE---EACV 127
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 184
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 185 SSKSDVWSFGVLMWEV 200
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 120/213 (56%), Gaps = 13/213 (6%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI---NEVSTIG 238
Y EI A + ++G G FG+VYKG+ H +AVK+L+ + E+F NEV+ +
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 239 RIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTAR 298
+ HVN++ +G+ ++ + A+V ++ SL +H+ +E K Q F +L +IA TA+
Sbjct: 88 KTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQ 143
Query: 299 GVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 358
G+ YLH I+H D+K +NI L K+ DFGLA + + + G++ +
Sbjct: 144 GMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 359 IAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGG 390
+APE+I ++ S +SDVY +G+VL E+ G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV EFM +G L ++ + +G F E L + L G+AYL + C+
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLE---EACV 125
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 182
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 183 SSKSDVWSFGVLMWEV 198
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K ++ S ++FI E + ++ H +VQL G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV+EFM +G L ++ + +G F E L + L G+AYL + C+
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLE---EACV 144
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 201
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 202 SSKSDVWSFGVLMWEV 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ S + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 72 Y-STAPQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 74 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F ++G G FG V+ G +A+K + S E+FI E + ++ H +VQL G
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C E + LV+EFM +G L ++ + +G F E L + L G+AYL + +
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYL--RTQRG-LFAAETLLGMCLDVCEGMAYLE---EASV 124
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N L+ N + KVSDFG+ +F ++ + S + T+ + + +PE+ S F
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFS--FSRY 181
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG+++ E+
Sbjct: 182 SSKSDVWSFGVLMWEV 197
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 99 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 151
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 77 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 218
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 152
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 92 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHAKS--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 115/209 (55%), Gaps = 14/209 (6%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
++G G FG+VYKG+ H +AVKML + + ++ F NEV + + HVN++ +G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ ++ + A+V ++ SL H+ E K F KL +IA TA+G+ YLH
Sbjct: 100 YSTK-PQLAIVTQWCEGSSLYHHLHIIETK---FEMIKLIDIARQTAQGMDYLHA---KS 152
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS-RNFG 369
I+H D+K +NI L + K+ DFGLA + + G+I ++APE+I ++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 370 TVSCKSDVYGFGMVLLE-MAGGRRNSNMN 397
S +SDVY FG+VL E M G SN+N
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNIN 241
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + +I H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 78 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 131
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 188
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 189 SDVWSFGILLTELTTKGR 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 74 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 127
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 184
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 185 SDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 76 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 129
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 186
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 187 SDVWSFGILLTELTTKGR 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 251 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 251 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVCEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 75 -EPIXIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 128
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 185
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 186 SDVWSFGILLTELTTKGR 203
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 251 -EPIYIVGEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 361
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 362 SDVWSFGILLTELTTKGR 379
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 22/270 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + F + + + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKWTAPESLAYN--KFS 188
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A + PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D+ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L +++ A G+AY+ M +H
Sbjct: 82 -EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 334 -EPIYIVTEYMSKGSL--LDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 387
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 444
Query: 375 SDVYGFGMVLLEM 387
SDV+ FG++L E+
Sbjct: 445 SDVWSFGILLTEL 457
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L +++ A G+AY+ M +H
Sbjct: 82 -EPIYIVTEYMNKGSL--LDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVHR 135
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPE--AALYGRFTIK 192
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 193 SDVWSFGILLTELTTKGR 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 130/275 (47%), Gaps = 22/275 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ +V E+MP G+L ++ +E + L +A + + YL +
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKK---NFI 152
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N T S
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--TFS 209
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A S I S+ VYD L KG +E + E
Sbjct: 210 IKSDVWAFGVLLWEIA-TYGMSPYPGIDLSQ------VYDLLEKGYRME-----QPEGCP 257
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
+ ++ C + ADRPS + + E D
Sbjct: 258 PKVYELMRA-CWKWSPADRPSFAETHQAFETMFHD 291
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVIEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N+ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M G L F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVMEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M G L F K G+ +L ++A A G+AY+ M +H
Sbjct: 85 -EPIYIVTEYMSKGCL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 138
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGLA+ ++N++ + + I + APE + +G + K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 195
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 196 SDVWSFGILLTELTTKGR 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 9/198 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
KLGQG FG V+ G + +A+K L+ S E F+ E + ++ H +VQL SE
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E+M GSL F K G+ +L ++A A G+AY+ M +H
Sbjct: 252 -EPIYIVTEYMSKGSL--LDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D++ NIL+ N + KV+DFGL + ++N++ + + I + APE + +G + K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPE--AALYGRFTIK 362
Query: 375 SDVYGFGMVLLEMAGGRR 392
SDV+ FG++L E+ R
Sbjct: 363 SDVWSFGILLTELTTKGR 380
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G FG VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 77 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 188
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A + PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 22/270 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 131
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 188
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A + PS VY+ L K +E
Sbjct: 189 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDPSQVYELLEKDYRMER------PEGC 235
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 236 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 9/209 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
EI + +LG G FG V+ G + +A+K L+ S E F+ E + ++ H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD 64
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+VQL SE +V E+M GSL F K+ +G+ L ++A A G+AY+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSL--LDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
M +H D++ NIL+ + I K++DFGLA+ ++N+ + + I + APE
Sbjct: 122 ER---MNYIHRDLRSANILVGNGLICKIADFGLARLI-EDNEXTARQGAKFPIKWTAPE- 176
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGRR 392
+ +G + KSDV+ FG++L E+ R
Sbjct: 177 -AALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 5 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 61
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 118
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 119 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREG 174
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 175 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 6 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 119
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREG 175
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 115/231 (49%), Gaps = 15/231 (6%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
EI + KLG G FG V+ G + +AVK L+ S + F+ E + + + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 67
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ EFM GSL F K ++G KL + + A G+AY+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE
Sbjct: 126 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 181
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNAIRSSKAYFP 407
I NFG + KS+V+ FG++L E+ GR N+++ + S P
Sbjct: 182 I--NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMP 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 15/231 (6%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
EI + +LG G FG V+ G + +AVK L+ S + F+ E + + + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD 68
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L + ++ E+M GSL F K ++G KL + + A G+AY+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSL--LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+H D++ N+L+ + + K++DFGLA+ ++N++ + + I + APE
Sbjct: 127 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 182
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNAIRSSKAYFP 407
I NFG + KSDV+ FG++L E+ GR N+++ S P
Sbjct: 183 I--NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMP 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 18/207 (8%)
Query: 196 LGQGGFGSVYKGQLH-TGR---LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G FG V G L G+ +A+K L++ ++ +F++E S +G+ H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G ++ + ++ EFM NGSLD F ++N GQ F +L + G A G+ YL DM
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 154
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKF-HPKENDFVSISATRGTIG--YIAPELISR 366
+H D+ NIL++ N + KVSDFGL++F +D SA G I + APE I
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 212
Query: 367 NFGTVSCKSDVYGFGMVLLE-MAGGRR 392
+ + SDV+ +G+V+ E M+ G R
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGER 239
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 191
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 192 IKSDVWAFGVLLWEIA 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 10 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 66
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 123
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N++ +
Sbjct: 124 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREG 179
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 180 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 135/285 (47%), Gaps = 49/285 (17%)
Query: 196 LGQGGFGSVYKGQLHTGR-----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 248
+G G FG VYKG L T +A+K L+ + +F+ E +G+ H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
G S+ ++ E+M NG+LD+ F +E G+ F +L + G A G+ YL N
Sbjct: 112 EGVISKYKPMMIITEYMENGALDK--FLREKDGE-FSVLQLVGMLRGIAAGMKYLAN--- 165
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELIS 365
M +H D+ NIL++ N + KVSDFGL++ E+D + T G I + APE IS
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPEAIS 223
Query: 366 -RNFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNAIRSSKAYFPSW------VYDQLNKG 417
R F + SDV+ FG+V+ E M G R P W V +N G
Sbjct: 224 YRKF---TSASDVWSFGIVMWEVMTYGER--------------PYWELSNHEVMKAINDG 266
Query: 418 GDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
L + S I + + + C Q + A RP ++ +L+
Sbjct: 267 --FRLPTPMDCPSAIYQLM----MQCWQQERARRPKFADIVSILD 305
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAPAGAKFPIKWTAPESLAYN--KFS 192
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 137
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 194
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 195 IKSDVWAFGVLLWEIA 210
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 203
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 204 IKSDVWAFGVLLWEIA 219
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 195
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 115/217 (52%), Gaps = 16/217 (7%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRL---IAVKMLEN--SKFSAEEFINEVSTI 237
EI A H +G G G V G+L G+ +A+K L+ ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G + G +V E+M NGSLD F + + GQ F +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV-SISATRGTI 356
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + + I
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI 218
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 392
+ APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 219 RWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 115/217 (52%), Gaps = 16/217 (7%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRL---IAVKMLEN--SKFSAEEFINEVSTI 237
EI A H +G G G V G+L G+ +A+K L+ ++ +F++E S +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIM 104
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G + G +V E+M NGSLD F + + GQ F +L + G
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD--TFLRTHDGQ-FTIMQLVGMLRGVG 161
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV-SISATRGTI 356
G+ YL D+ +H D+ N+L+D N + KVSDFGL++ + D + + + I
Sbjct: 162 AGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI 218
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRR 392
+ APE I+ F T S SDV+ FG+V+ E +A G R
Sbjct: 219 RWTAPEAIA--FRTFSSASDVWSFGVVMWEVLAYGER 253
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G FG V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 181
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 182 I--NYGTFTIKSDVWSFGILLTEI 203
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 192
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 193 IKSDVWAFGVLLWEIA 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 2 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 58
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 59 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 115
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 116 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 171
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 172 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 190
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 191 IKSDVWAFGVLLWEIA 206
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 1 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 57
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 58 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 114
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 115 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 170
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 171 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 204
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 9 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 65
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 66 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 122
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 123 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 178
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 179 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 212
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G FG V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 63
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 64 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H D++ NIL+ K++DFGLA+ ++N++ + + I + APE
Sbjct: 121 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 176
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 177 I--NYGTFTIKSDVWSFGILLTEI 198
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 8 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 64
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 121
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 122 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 177
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 178 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 109/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P T +LG G FG V+ G + +AVK L+ S + F+
Sbjct: 6 QKPWWEDEWEVPR---ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + ++ H +V+L ++ ++ E+M NGSL F K G KL +
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLD 119
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+A A G+A++ + +H D++ NIL+ K++DFGLA+ ++N+ +
Sbjct: 120 MAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREG 175
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I N+GT + KSDV+ FG++L E+
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEI 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 117/230 (50%), Gaps = 28/230 (12%)
Query: 176 MPKRYSYP---------EIIAVTNHFTHKLGQGGFGSVYKGQLH-TGRL---IAVKMLE- 221
MP Y P EI A +G G FG V G+L G+ +A+K L+
Sbjct: 1 MPHTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKV 60
Query: 222 -NSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENK 280
++ +F+ E S +G+ H N++ L G ++ +V E+M NGSLD F K+N
Sbjct: 61 GYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD--TFLKKND 118
Query: 281 GQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 340
GQ F +L + G + G+ YL DM +H D+ NIL++ N + KVSDFGL++
Sbjct: 119 GQ-FTVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
Query: 341 PKENDFVSISATRG---TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
E+D + TRG I + APE I+ F + SDV+ +G+V+ E+
Sbjct: 175 --EDDPEAAYTTRGGKIPIRWTAPEAIA--FRKFTSASDVWSYGIVMWEV 220
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 195
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 196 IKSDVWAFGVLLWEIA 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 143/293 (48%), Gaps = 42/293 (14%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMLENSKFSAE--EFINEVSTI 237
EI A +G G FG V G+L G+ +A+K L+ + +F++E S +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 84
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N++ L G ++ ++ E+M NGSLD F ++N G+ F +L + G
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 141
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 142 SGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 196
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRSSKAYFPSW 409
I + APE I+ + + SDV+ +G+V+ E M+ G R SN + I++ + +
Sbjct: 197 PIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY--- 251
Query: 410 VYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
R ++ IA M+ W Q + +DRP +++ ML+
Sbjct: 252 -------------RLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 289
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+ N L+ N + KV+DFGL++ + A + I + APE ++ N S
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA-KFPIKWTAPESLAYN--KFS 191
Query: 373 CKSDVYGFGMVLLEMA 388
KSDV+ FG++L E+A
Sbjct: 192 IKSDVWAFGVLLWEIA 207
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMLENSKFSAE--EFINEVSTI 237
EI A +G G FG V G+L G+ +A+K L+ + +F++E S +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N++ L G ++ ++ E+M NGSLD F ++N G+ F +L + G
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 120
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 121 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 175
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRSSKAYFPS 408
I + APE I+ R F + SDV+ +G+V+ E M+ G R SN + I++ + +
Sbjct: 176 PIRWTAPEAIAYRKFTSA---SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY-- 230
Query: 409 WVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
R ++ IA M+ W Q + +DRP +++ ML+
Sbjct: 231 --------------RLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G FG V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 181
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 182 I--NYGTFTIKSDVWSFGILLTEI 203
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 18/207 (8%)
Query: 196 LGQGGFGSVYKGQLH-TGR---LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G FG V G L G+ +A+K L++ ++ +F++E S +G+ H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G ++ + ++ EFM NGSLD F ++N GQ F +L + G A G+ YL DM
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDS--FLRQNDGQ-FTVIQLVGMLRGIAAGMKYL---ADM 128
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKF-HPKENDFVSISATRGTIG--YIAPELISR 366
+H + NIL++ N + KVSDFGL++F +D SA G I + APE I
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI-- 186
Query: 367 NFGTVSCKSDVYGFGMVLLE-MAGGRR 392
+ + SDV+ +G+V+ E M+ G R
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGER 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 44/294 (14%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT-GR---LIAVKMLEN--SKFSAEEFINEVSTI 237
EI A +G G FG V G+L G+ +A+K L+ + +F++E S +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N++ L G ++ ++ E+M NGSLD F ++N G+ F +L + G
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLD--AFLRKNDGR-FTVIQLVGMLRGIG 126
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFG+++ E+D + TRG
Sbjct: 127 SGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVL--EDDPEAAYTTRGGKI 181
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRSSKAYFPS 408
I + APE I+ R F + SDV+ +G+V+ E M+ G R SN + I++ + +
Sbjct: 182 PIRWTAPEAIAYRKFTSA---SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY-- 236
Query: 409 WVYDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
R ++ IA M+ W Q + +DRP +++ ML+
Sbjct: 237 --------------RLPPPMDCPIALHQLMLDCW--QKERSDRPKFGQIVNMLD 274
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G FG V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H D++ NIL+ K++DFGLA+ ++N+ + + I + APE
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEA 181
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 182 I--NYGTFTIKSDVWSFGILLTEI 203
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 18/207 (8%)
Query: 196 LGQGGFGSVYKGQLHT-GR---LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G FG V +G+L G+ +A+K L+ ++ EF++E S +G+ H N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G + ++ EFM NG+LD F + N GQ F +L + G A G+ YL +M
Sbjct: 82 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 135
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 366
+H D+ NIL++ N + KVSDFGL++F + + + +++ G I + APE I+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA- 194
Query: 367 NFGTVSCKSDVYGFGMVLLE-MAGGRR 392
F + SD + +G+V+ E M+ G R
Sbjct: 195 -FRKFTSASDAWSYGIVMWEVMSFGER 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 110/216 (50%), Gaps = 12/216 (5%)
Query: 172 QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFI 231
Q+ W + P + KLG G FG V+ + +AVK ++ S E F+
Sbjct: 2 QKPWEKDAWEIPR---ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFL 58
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + + + H +V+L ++ ++ EFM GSL F K ++G KL +
Sbjct: 59 AEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLID 115
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+ A G+A++ +H D++ NIL+ + + K++DFGLA+ ++N++ +
Sbjct: 116 FSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREG 171
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I + APE I NFG+ + KSDV+ FG++L+E+
Sbjct: 172 AKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEI 205
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G FG V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 64
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 65 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H +++ NIL+ K++DFGLA+ ++N++ + + I + APE
Sbjct: 122 E---ERNYIHRNLRAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEA 177
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 178 I--NYGTFTIKSDVWSFGILLTEI 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 18/207 (8%)
Query: 196 LGQGGFGSVYKGQLHT-GR---LIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G FG V +G+L G+ +A+K L+ ++ EF++E S +G+ H N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G + ++ EFM NG+LD F + N GQ F +L + G A G+ YL +M
Sbjct: 84 GVVTNSMPVMILTEFMENGALDS--FLRLNDGQ-FTVIQLVGMLRGIASGMRYL---AEM 137
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKF-HPKENDFVSISATRGTIG--YIAPELISR 366
+H D+ NIL++ N + KVSDFGL++F +D S+ G I + APE I+
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA- 196
Query: 367 NFGTVSCKSDVYGFGMVLLE-MAGGRR 392
F + SD + +G+V+ E M+ G R
Sbjct: 197 -FRKFTSASDAWSYGIVMWEVMSFGER 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 107/204 (52%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
EI + KLG G FG V+ + +AVK ++ S E F+ E + + + H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 243
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ EFM GSL F K ++G KL + + A G+A++
Sbjct: 244 KLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+H D++ NIL+ + + K++DFGLA+ ++N++ + + I + APE
Sbjct: 301 EQ---RNYIHRDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEA 356
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I NFG+ + KSDV+ FG++L+E+
Sbjct: 357 I--NFGSFTIKSDVWSFGILLMEI 378
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 144/328 (43%), Gaps = 41/328 (12%)
Query: 148 LVFLIHKYRTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHF------------THK 195
L L+H + T D + LH PKR + P I V+ ++ HK
Sbjct: 175 LAELVHHHSTV---ADGLITTLHYP---APKR-NKPTIYGVSPNYDKWEMERTDITMKHK 227
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
++ EFM G+L ++ +E Q L +A + + YL +H
Sbjct: 288 EPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHR 342
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S K
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFSIK 399
Query: 375 SDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVIAR 434
SDV+ FG++L E+A + S VY+ L K +E
Sbjct: 400 SDVWAFGVLLWEIA-------TYGMSPYPGIDLSQVYELLEKDYRMER------PEGCPE 446
Query: 435 KLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 325 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFI 379
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 436
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 437 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDLSQVYELLEKDYRMER------PEGC 483
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 484 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 22/270 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
HKLG G +G VY+G L +AVK L+ EEF+ E + + I H N+VQLLG C
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EFM G+L ++ +E Q L +A + + YL +
Sbjct: 283 TREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEYLEK---KNFI 337
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H ++ N L+ N + KV+DFGL++ + + + + + I + APE ++ N S
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYN--KFS 394
Query: 373 CKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIESVI 432
KSDV+ FG++L E+A + S VY+ L K +E
Sbjct: 395 IKSDVWAFGVLLWEIA-------TYGMSPYPGIDLSQVYELLEKDYRMER------PEGC 441
Query: 433 ARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
K+ + C Q +DRPS ++ + E
Sbjct: 442 PEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 141/282 (50%), Gaps = 44/282 (15%)
Query: 196 LGQGGFGSVYKGQLH-TGR---LIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G FG V G+L G+ +A+K L+ ++ +F+ E S +G+ H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G + G +V EFM NG+LD F +++ GQ F +L + G A G+ YL DM
Sbjct: 111 GVVTRGKPVMIVIEFMENGALD--AFLRKHDGQ-FTVIQLVGMLRGIAAGMRYL---ADM 164
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG---TIGYIAPELISR 366
+H D+ NIL++ N + KVSDFGL++ E+D ++ T G + + APE I
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEAVYTTTGGKIPVRWTAPEAI-- 220
Query: 367 NFGTVSCKSDVYGFGMVLLE-MAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNV 425
+ + SDV+ +G+V+ E M+ G R P W D N+ D+ ++ +
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGER--------------PYW--DMSNQ--DV-IKAI 261
Query: 426 TEIESVIARKLCMIGLW-----CIQVKAADRPSMTKVLEMLE 462
E + A C GL C Q + A+RP +++ +L+
Sbjct: 262 EEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSRGSKFPVRWSPPEVLM--YSKF 183
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 125
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 182
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 183 SSKSDIWAFGVLMWEI 198
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 121
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 178
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 179 SSKSDIWAFGVLMWEI 194
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 183
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGLA+ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 132
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 189
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 190 SSKSDIWAFGVLMWEI 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+LG G FG V G+ +AVKM++ S +EF E T+ ++ H +V+ G CS+
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+V E++ NG L ++ + G+ +L E+ G+A+L + +H
Sbjct: 75 EYPIYIVTEYISNGCLLNYL---RSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHR 128
Query: 315 DIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCK 374
D+ N L+D + KVSDFG+ ++ ++ +VS T+ + + APE+ ++ S K
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAPEVF--HYFKYSSK 185
Query: 375 SDVYGFGMVLLEM 387
SDV+ FG+++ E+
Sbjct: 186 SDVWAFGILMWEV 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ ++++ S ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLM--YSKF 198
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 128
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 183
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 184 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 155
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 156 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 210
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 211 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 145
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 146 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 200
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 201 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E+M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL + E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 102/196 (52%), Gaps = 9/196 (4%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
F +LG G FG V G+ +A+KM++ S +EFI E + + H +VQL G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
C++ ++ E+M NG L ++ ++ QT ++L E+ + YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QF 141
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+ N L++ + KVSDFGL+++ + + S+ ++ + + PE++ +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLM--YSKF 198
Query: 372 SCKSDVYGFGMVLLEM 387
S KSD++ FG+++ E+
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E M NGSLD F +++ Q F +L + G A
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 128
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 129 SGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 183
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 184 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 120/233 (51%), Gaps = 26/233 (11%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL----IAVKMLE--NSKFSAEEFINEVSTI 237
E+ A +G G FG V G+L +A+K L+ ++ +F+ E S +
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
G+ H N+++L G ++ +V E M NGSLD F +++ Q F +L + G A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS--FLRKHDAQ-FTVIQLVGMLRGIA 157
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG--- 354
G+ YL DM +H D+ NIL++ N + KVSDFGL++ E+D + TRG
Sbjct: 158 SGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--EDDPEAAYTTRGGKI 212
Query: 355 TIGYIAPELIS-RNFGTVSCKSDVYGFGMVLLE-MAGGRRN----SNMNAIRS 401
I + +PE I+ R F + SDV+ +G+VL E M+ G R SN + I++
Sbjct: 213 PIRWTSPEAIAYRKF---TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 9/204 (4%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
E+ T +LG G G V+ G + +AVK L+ S + F+ E + + ++ H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQ 68
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ E+M NGSL F K G KL ++A A G+A++
Sbjct: 69 RLVRLYAVVTQ-EPIYIITEYMENGSLVD--FLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+ +H D++ NIL+ K++DFGLA+ ++ + + + I + APE
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEA 181
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I N+GT + KSDV+ FG++L E+
Sbjct: 182 I--NYGTFTIKSDVWSFGILLTEI 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV 243
EI + KLG G FG V+ + +AVK ++ S E F+ E + + + H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD 237
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
+V+L ++ ++ EFM GSL F K ++G KL + + A G+A++
Sbjct: 238 KLVKLHAVVTK-EPIYIITEFMAKGSL--LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 294
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
+H D++ NIL+ + + K++DFGLA+ + I + APE
Sbjct: 295 EQ---RNYIHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEA 340
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM 387
I NFG+ + KSDV+ FG++L+E+
Sbjct: 341 I--NFGSFTIKSDVWSFGILLMEI 362
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ +F + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK--------GQTFGWEKLQEIALGTA 297
LLG C++ G ++ EF G+L ++ K N+ E L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
+G+ +L +H D+ NILL + K+ DFGLA+ K+ D+V R +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 114/230 (49%), Gaps = 30/230 (13%)
Query: 195 KLGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + HTG+ +AVK ++ K E + NEV + HH NVV +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 253 SEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
G + +V EF+ G+L D + N+ E++ + L R ++YLHN +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNE------EQIATVCLSVLRALSYLHN---QGV 162
Query: 312 LHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR- 366
+H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV------GTPYWMAPEVISRL 216
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGR----RNSNMNAIRSSKAYFPSWVYD 412
+GT + D++ G++++EM G + A+R + P V D
Sbjct: 217 PYGT---EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD 263
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ EF+P GSL ++ + + KL + +G+ YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL---IAVKMLEN--SKFSAEEFI 231
P YP + F +G+G FG V K ++ L A+K ++ SK +F
Sbjct: 4 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 63
Query: 232 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL------------DRHIFPKE 278
E+ + ++ HH N++ LLG C L E+ P+G+L D
Sbjct: 64 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 123
Query: 279 NKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK 338
+ T ++L A ARG+ YL +H D+ NIL+ N++ K++DFGL++
Sbjct: 124 STASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 180
Query: 339 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 396
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 181 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 235
Query: 397 NAIRSSKAYFPSWVYDQLNKGGDLE--LRNVTEIESVIARKLCMIGLWCIQVKAADRPSM 454
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 236 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 278
Query: 455 TKVLEMLEGSMDD 467
++L L +++
Sbjct: 279 AQILVSLNRMLEE 291
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 23/210 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK--------GQTFGWEKLQEIALGTA 297
LLG C++ G ++ EF G+L ++ K N+ E L + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
+G+ +L +H D+ NILL + K+ DFGLA+ K+ D+V R +
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
++APE I T+ +SDV+ FG++L E+
Sbjct: 212 WMAPETIFDRVYTI--QSDVWSFGVLLWEI 239
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL---IAVKMLEN--SKFSAEEFI 231
P YP + F +G+G FG V K ++ L A+K ++ SK +F
Sbjct: 14 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 73
Query: 232 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL------------DRHIFPKE 278
E+ + ++ HH N++ LLG C L E+ P+G+L D
Sbjct: 74 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 133
Query: 279 NKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK 338
+ T ++L A ARG+ YL +H D+ NIL+ N++ K++DFGL++
Sbjct: 134 STASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR 190
Query: 339 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 396
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 191 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245
Query: 397 NAIRSSKAYFPSWVYDQLNKGGDLE--LRNVTEIESVIARKLCMIGLWCIQVKAADRPSM 454
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 246 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 288
Query: 455 TKVLEMLEGSMDD 467
++L L +++
Sbjct: 289 AQILVSLNRMLEE 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 25/212 (11%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE----------IALG 295
LLG C++ G ++ EF G+L ++ K N+ + E L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+ +L +H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 214 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 157 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 214 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 25/214 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGR-LIAVK--MLENSKFSAE------EFINEVSTIGRIH 241
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVA 301
H N+V+L G + +V EF+P G L + +K W + L A G+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 302 YLHNGCDMCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTI 356
Y+ N + I+H D++ NI L D N KV+DFGL+ + S+S G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLGNF 190
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++APE I + + K+D Y F M+L + G
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 130 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 187 SLTES--KFSVASDVWSFGVVLYEL 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 135 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 192 SLTES--KFSVASDVWSFGVVLYEL 214
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 105/214 (49%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 192 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 249 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 280
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYL 133
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 129 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 186 SLTES--KFSVASDVWSFGVVLYEL 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 136 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 193 SLTES--KFSVASDVWSFGVVLYEL 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 137 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 194 SLTES--KFSVASDVWSFGVVLYEL 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 131 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 188 SLTES--KFSVASDVWSFGVVLYEL 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 162 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 219 SLTES--KFSVASDVWSFGVVLYEL 241
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK-----------GQTFGWEKLQEIAL 294
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 295 GTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG 354
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 156 QVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 213 PLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 134 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 191 SLTES--KFSVASDVWSFGVVLYEL 213
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 25/208 (12%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKML-----ENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
+G GGFG VY+ G +AVK E+ + E E + H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
C + LV EF G L+R + G+ + L A+ ARG+ YLH+ +
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-----SGKRIPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 311 ILHFDIKPHNILLDH--------NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
I+H D+K NIL+ N I K++DFGLA +E + + G ++APE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLA----REWHRTTKMSAAGAYAWMAPE 184
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGG 390
+I + S SDV+ +G++L E+ G
Sbjct: 185 VIRASM--FSKGSDVWSYGVLLWELLTG 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 138 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 195 SLTES--KFSVASDVWSFGVVLYEL 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 149 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 206 SLTES--KFSVASDVWSFGVVLYEL 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 252
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG
Sbjct: 18 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQT-FGWEKLQEIALGTARGVAYLHNGCDMCI 311
E +V E+M GSL ++ ++G++ G + L + +L + YL
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 129
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N+L+ + + KVSDFGL K D + + + APE +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALRE--AAF 182
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG++L E+
Sbjct: 183 STKSDVWSFGILLWEI 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 254
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQT-FGWEKLQEIALGTARGVAYLHNGCDMCILH 313
+V E+M GSL ++ ++G++ G + L + +L + YL +H
Sbjct: 259 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 314 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSC 373
D+ N+L+ + + KVSDFGL K D + + + APE + S
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREK--KFST 365
Query: 374 KSDVYGFGMVLLEM 387
KSDV+ FG++L E+
Sbjct: 366 KSDVWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 17/194 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FCSE 254
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG E
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQT-FGWEKLQEIALGTARGVAYLHNGCDMCILH 313
+V E+M GSL ++ ++G++ G + L + +L + YL +H
Sbjct: 72 KGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 314 FDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSC 373
D+ N+L+ + + KVSDFGL K D + + + APE + S
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREK--KFST 178
Query: 374 KSDVYGFGMVLLEM 387
KSDV+ FG++L E+
Sbjct: 179 KSDVWSFGILLWEI 192
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H ++ NIL+++ K+ DFGL K P++ ++ + I + APE
Sbjct: 132 --GTKRYI-HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 189 SLTES--KFSVASDVWSFGVVLYEL 211
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 17/196 (8%)
Query: 194 HKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG-FC 252
+G+G FG V G + G +AVK ++N +A+ F+ E S + ++ H N+VQLLG
Sbjct: 27 QTIGKGEFGDVMLGD-YRGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQT-FGWEKLQEIALGTARGVAYLHNGCDMCI 311
E +V E+M GSL ++ ++G++ G + L + +L + YL
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---F 138
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
+H D+ N+L+ + + KVSDFGL K D + + + APE +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-----VKWTAPEALREK--KF 191
Query: 372 SCKSDVYGFGMVLLEM 387
S KSDV+ FG++L E+
Sbjct: 192 STKSDVWSFGILLWEI 207
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 192 FTHKLGQGGFGSVYKG-----QLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNV 245
F +LG+G FGSV Q +TG ++AVK L++S + +F E+ + + H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 246 VQLLGFCSEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V+ G C +R L+ E++P GSL ++ + + KL + +G+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYL 148
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT-RGTIGYIAPE 362
G I H D+ NIL+++ K+ DFGL K P++ + + I + APE
Sbjct: 149 --GTKRYI-HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM 387
++ + S SDV+ FG+VL E+
Sbjct: 206 SLTES--KFSVASDVWSFGVVLYEL 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 146 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 203 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK------------GQTFGWEKLQEIA 293
LLG C++ G ++ EF G+L ++ K N+ E L +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR 353
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D V R
Sbjct: 155 FQVAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 212 LPLKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 243
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 137/313 (43%), Gaps = 47/313 (15%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHTGRL---IAVKMLEN--SKFSAEEFI 231
P YP + F +G+G FG V K ++ L A+K ++ SK +F
Sbjct: 11 PDPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFA 70
Query: 232 NEVSTIGRI-HHVNVVQLLGFCSEGSKRALVYEFMPNGSL------------DRHIFPKE 278
E+ + ++ HH N++ LLG C L E+ P+G+L D
Sbjct: 71 GELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIAN 130
Query: 279 NKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK 338
+ T ++L A ARG+ YL +H ++ NIL+ N++ K++DFGL++
Sbjct: 131 STASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR 187
Query: 339 FHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA--GGRRNSNM 396
+ +V + R + ++A E S N+ + SDV+ +G++L E+ GG M
Sbjct: 188 ---GQEVYVKKTMGRLPVRWMAIE--SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 242
Query: 397 NAIRSSKAYFPSWVYDQLNKGGDLE--LRNVTEIESVIARKLCMIGLWCIQVKAADRPSM 454
+Y++L +G LE L E+ ++ + C + K +RPS
Sbjct: 243 TCAE---------LYEKLPQGYRLEKPLNCDDEVYDLMRQ--------CWREKPYERPSF 285
Query: 455 TKVLEMLEGSMDD 467
++L L +++
Sbjct: 286 AQILVSLNRMLEE 298
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 195 KLGQGGFGSVYKGQLHT------GRLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 247
+LG+G FG V+ + H L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQ-----------TFGWEKLQEIALGT 296
G C+EG +V+E+M +G L+R + + G +L +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 356
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 357 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 202 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGR-LIAVK--MLENSKFSAE------EFINEVSTIGRIH 241
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVA 301
H N+V+L G + +V EF+P G L + +K W + L A G+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 302 YLHNGCDMCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTI 356
Y+ N + I+H D++ NI L D N KV+DF L+ + S+S G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLGNF 190
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++APE I + + K+D Y F M+L + G
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGR-LIAVK--MLENSKFSAE------EFINEVSTIGRIH 241
+ ++G+GGFG V+KG+L + ++A+K +L +S+ E EF EV + ++
Sbjct: 22 EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVA 301
H N+V+L G + +V EF+P G L + +K W + L A G+
Sbjct: 82 HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDIALGIE 136
Query: 302 YLHNGCDMCILHFDIKPHNILL---DHN--FIPKVSDFGLAKFHPKENDFVSISATRGTI 356
Y+ N + I+H D++ NI L D N KV+DFG + + S+S G
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHSVSGLLGNF 190
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++APE I + + K+D Y F M+L + G
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 255
+G+G FG V K + + +A+K +E S+ + FI E+ + R++H N+V+L G C
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 72
Query: 256 SKRALVYEFMPNGSL-----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV E+ GSL P W L ++GVAYLH+
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 126
Query: 311 ILHFDIKPHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H D+KP N+LL + K+ DFG A + ++ +G+ ++APE+ +
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS-- 179
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTE-I 428
S K DV+ +G++L E+ R+ + A+ W N ++N+ + I
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIG---GPAFRIMWAVH--NGTRPPLIKNLPKPI 234
Query: 429 ESVIARKLCMIGLWCIQVKAADRPSMTKVLEML-------EGSMDDLQMP 471
ES++ R C + RPSM ++++++ G+ + LQ P
Sbjct: 235 ESLMTR--------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 44/290 (15%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEG 255
+G+G FG V K + + +A+K +E S+ + FI E+ + R++H N+V+L G C
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIKQIE-SESERKAFIVELRQLSRVNHPNIVKLYGACL-- 71
Query: 256 SKRALVYEFMPNGSL-----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV E+ GSL P W L ++GVAYLH+
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPKA 125
Query: 311 ILHFDIKPHNILL-DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H D+KP N+LL + K+ DFG A + ++ +G+ ++APE+ +
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGS-- 178
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTE-I 428
S K DV+ +G++L E+ R+ + A+ W N ++N+ + I
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIG---GPAFRIMWAVH--NGTRPPLIKNLPKPI 233
Query: 429 ESVIARKLCMIGLWCIQVKAADRPSMTKVLEML-------EGSMDDLQMP 471
ES++ R C + RPSM ++++++ G+ + LQ P
Sbjct: 234 ESLMTR--------CWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYP 275
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 165 IEKFLHNQQSWMPK-----RYSYPEIIAVTNH----FTHKLGQGGFGSVYKGQLHT-GRL 214
I+ L QQ K + P+ V NH ++G+G FG V+ G+L L
Sbjct: 82 IDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL 141
Query: 215 IAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDR 272
+AVK + +F+ E + + H N+V+L+G C++ +V E + G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 273 HIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVS 332
+ +G + L ++ A G+ YL + C CI H D+ N L+ + K+S
Sbjct: 202 FL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKIS 255
Query: 333 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 386
DFG+++ S + + + APE + N+G S +SDV+ FG++L E
Sbjct: 256 DFGMSREEADGVXAASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 28/210 (13%)
Query: 197 GQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 256
+G FG V+K QL +AVK+ + + EV ++ + H N++Q +G G+
Sbjct: 33 ARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 257 KRA----LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-------N 305
L+ F GSL + K W +L IA ARG+AYLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIG---YIAP 361
G I H DIK N+LL +N ++DFGLA KF + S T G +G Y+AP
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGK----SAGDTHGQVGTRRYMAP 202
Query: 362 ELI--SRNFGTVS-CKSDVYGFGMVLLEMA 388
E++ + NF + + D+Y G+VL E+A
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWELA 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAV----KMLENS--KFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+V+KG + G I + K++E+ + S + + + IG + H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C GS LV +++P GSL H+ ++++G G + L + A+G+ YL +
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 151
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H ++ N+LL +V+DFG+A P ++ + S + I ++A E I +F
Sbjct: 152 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 209
Query: 369 GTVSCKSDVYGFGMVLLEM 387
G + +SDV+ +G+ + E+
Sbjct: 210 GKYTHQSDVWSYGVTVWEL 228
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 28/217 (12%)
Query: 192 FTHKLGQGGFGSVYKGQLHT------GRLIAVKMLENSKFSA-EEFINEVSTIGRIHHVN 244
+LG+G FG V+ + + L+AVK L++ +A ++F E + + H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF-------------PKENKGQTFGWEKLQE 291
+V+ G C +G +V+E+M +G L++ + P++ KG+ G ++
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLH 137
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
IA A G+ YL +H D+ N L+ N + K+ DFG+++ + +
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 352 TRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
T I ++ PE ++ R F T +SDV+ FG++L E+
Sbjct: 195 TMLPIRWMPPESIMYRKFTT---ESDVWSFGVILWEI 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 26/210 (12%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLG-FC 252
+G G +G VYKG+ + TG+L A+K+++ + EE E++ + + HH N+ G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 253 SEG-----SKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ + LV EF GS+ I K KG T E + I RG+++LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQ-- 147
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPEL 363
++H DIK N+LL N K+ DFG L + + N F+ GT ++APE+
Sbjct: 148 -HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI------GTPYWMAPEV 200
Query: 364 ISRNF---GTVSCKSDVYGFGMVLLEMAGG 390
I+ + T KSD++ G+ +EMA G
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 195 KLGQGGFGSVYKGQLHT------GRLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 247
+LG+G FG V+ + H L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQ-----------TFGWEKLQEIALGT 296
G C+EG +V+E+M +G L+R + + G +L +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 356
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 357 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 196 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 128/273 (46%), Gaps = 38/273 (13%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRIH----HVNVVQLLG 250
LG+G F VY+ + +HTG +A+KM++ + V +IH H ++++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + + LV E NG ++R++ +N+ + F + + G+ YLH+
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLYLHSHG--- 132
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNF 368
ILH D+ N+LL N K++DFGLA P E + GT YI+PE+ +R+
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC----GTPNYISPEIATRS- 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKG--GDLELRNVT 426
+SDV+ G + + GR + + ++++ LNK D E+ +
Sbjct: 188 -AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----------LNKVVLADYEMPSFL 235
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKVLE 459
IE A+ L ++ ADR S++ VL+
Sbjct: 236 SIE---AKDLIH---QLLRRNPADRLSLSSVLD 262
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 109/199 (54%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAV----KMLENS--KFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+V+KG + G I + K++E+ + S + + + IG + H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C GS LV +++P GSL H+ ++++G G + L + A+G+ YL +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLE---E 133
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H ++ N+LL +V+DFG+A P ++ + S + I ++A E I +F
Sbjct: 134 HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI--HF 191
Query: 369 GTVSCKSDVYGFGMVLLEM 387
G + +SDV+ +G+ + E+
Sbjct: 192 GKYTHQSDVWSYGVTVWEL 210
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 195 KLGQGGFGSVYKGQLHT------GRLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 247
+LG+G FG V+ + H L+AVK L+ + SA ++F E + + H ++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQ-----------TFGWEKLQEIALGT 296
G C+EG +V+E+M +G L+R + + G +L +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTI 356
A G+ YL + +H D+ N L+ + K+ DFG+++ + + T I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 357 GYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
++ PE ++ R F T +SDV+ FG+VL E+
Sbjct: 225 RWMPPESILYRKFTT---ESDVWSFGVVLWEI 253
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 20/234 (8%)
Query: 165 IEKFLHNQQSWMPK-----RYSYPEIIAVTNH----FTHKLGQGGFGSVYKGQLHT-GRL 214
I+ L QQ K + P+ V NH ++G+G FG V+ G+L L
Sbjct: 82 IDHLLSTQQPLTKKSGVVLHRAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTL 141
Query: 215 IAVKMLENSKFS--AEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDR 272
+AVK + +F+ E + + H N+V+L+G C++ +V E + G
Sbjct: 142 VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLT 201
Query: 273 HIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVS 332
+ +G + L ++ A G+ YL + C CI H D+ N L+ + K+S
Sbjct: 202 FL---RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CI-HRDLAARNCLVTEKNVLKIS 255
Query: 333 DFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 386
DFG+++ S + + + APE + N+G S +SDV+ FG++L E
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEAL--NYGRYSSESDVWSFGILLWE 307
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 9 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 117
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 118 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 175 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 27/208 (12%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
LG+G +G VY G+ L IA+K + +S++S + E++ + H N+VQ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 253 SEGSKRALVYEFMPNGSLDRHIF----PKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
SE + E +P GSL + P ++ QT G+ Q + G+ YLH D
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---D 140
Query: 309 MCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPEL 363
I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+APE+
Sbjct: 141 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEI 194
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I + +D++ G ++EMA G+
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLE-NSKFSAEEFIN-----EVSTIGRIHHVNVVQL 248
LG+G F +VYK + +T +++A+K ++ + A++ IN E+ + + H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
L S +LV++FM D + K+N ++ L T +G+ YLH
Sbjct: 78 LDAFGHKSNISLVFDFM---ETDLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQ--- 130
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI--S 365
ILH D+KP+N+LLD N + K++DFGLAK F + TR Y APEL+ +
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTR---WYRAPELLFGA 187
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
R +G D++ G +L E+
Sbjct: 188 RMYGV---GVDMWAVGCILAEL 206
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 20/203 (9%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
KLG+G +GSVYK TG+++A+K + + +E I E+S + + +VV+ G
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ + +V E+ GS+ I + +T +++ I T +G+ YLH M +
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDII---RLRNKTLTEDEIATILQSTLKGLEYLHF---MRKI 147
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR----GTIGYIAPELISRNF 368
H DIK NILL+ K++DFG+A A R GT ++APE+I +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA------GQLTDXMAKRNXVIGTPFWMAPEVI-QEI 200
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
G +C +D++ G+ +EMA G+
Sbjct: 201 G-YNCVADIWSLGITAIEMAEGK 222
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 27/208 (12%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
LG+G +G VY G+ L IA+K + +S++S + E++ + H N+VQ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS-QPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 253 SEGSKRALVYEFMPNGSLDRHIF----PKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
SE + E +P GSL + P ++ QT G+ Q + G+ YLH D
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLH---D 126
Query: 309 MCILHFDIKPHNILLD-HNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPEL 363
I+H DIK N+L++ ++ + K+SDFG LA +P F GT+ Y+APE+
Sbjct: 127 NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT------GTLQYMAPEI 180
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I + +D++ G ++EMA G+
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 11 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 119
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 120 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 177 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G +G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 22/202 (10%)
Query: 195 KLGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + H+GR +AVKM++ K E + NEV + H NVV++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + ++ EF+ G+L + E++ + + +AYLH ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHA---QGVI 163
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
H DIK +ILL + K+SDFG ++K PK V GT ++APE+ISR+
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV------GTPYWMAPEVISRSL 217
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ + D++ G++++EM G
Sbjct: 218 --YATEVDIWSLGIMVIEMVDG 237
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 104/212 (49%), Gaps = 32/212 (15%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVK--MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
KLG G + +VYKG TG +A+K L++ + + I E+S + + H N+V+L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 252 CSEGSKRALVYEFMPNG---SLDRHIFPKENKG------QTFGWEKLQEIALGTARGVAY 302
+K LV+EFM N +D +G + F W+ LQ G+A+
Sbjct: 72 IHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ--------GLAF 123
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAP 361
H ILH D+KP N+L++ K+ DFGLA+ F N F S+ T+ Y AP
Sbjct: 124 CHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF---SSEVVTLWYRAP 177
Query: 362 ELI--SRNFGTVSCKSDVYGFGMVLLEMAGGR 391
+++ SR T S D++ G +L EM G+
Sbjct: 178 DVLMGSR---TYSTSIDIWSCGCILAEMITGK 206
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINE--VSTIGRIHHVNVVQLL---- 249
+G+G +G+VYKG L R +AVK+ S + + FINE + + + H N+ + +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF--SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 250 GFCSEGS-KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
++G + LV E+ PNGSL +++ T W +A RG+AYLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 309 M------CILHFDIKPHNILLDHNFIPKVSDFGLAK-------FHPKENDFVSISATRGT 355
I H D+ N+L+ ++ +SDFGL+ P E D +IS GT
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV-GT 191
Query: 356 IGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEM 387
I Y+APE++ R+ + + D+Y G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 192 FTHKLGQGGFGSVYKGQLHTGRL----IAVKMLENSKF--SAEEFINEVSTIGRIHHVNV 245
LG+G G V QL R+ +AVK+++ + E E+ ++H NV
Sbjct: 10 LVQTLGEGAAGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGVA 301
V+ G EG+ + L E+ G L I P E Q F + + GV
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--------GVV 118
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YLH + I H DIKP N+LLD K+SDFGLA N ++ GT+ Y+AP
Sbjct: 119 YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
EL+ R DV+ G+VL M G
Sbjct: 176 ELLKRREFHAE-PVDVWSCGIVLTAMLAG 203
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 104/207 (50%), Gaps = 25/207 (12%)
Query: 193 THKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKF-SAEEFINEVSTIGRIHHVNVVQLLG 250
T LG G FG V+K + TG +A K+++ EE NE+S + ++ H N++QL
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQEIAL--GTARGVAYLHNGC 307
+ LV E++ G L DR I +++ +L I G+ ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRII------DESYNLTELDTILFMKQICEGIRHMHQ-- 205
Query: 308 DMCILHFDIKPHNILL---DHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPEL 363
M ILH D+KP NIL D I K+ DFGLA ++ P+E + GT ++APE+
Sbjct: 206 -MYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPRE----KLKVNFGTPEFLAPEV 259
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ +F VS +D++ G++ + G
Sbjct: 260 VNYDF--VSFPTDMWSVGVIAYMLLSG 284
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 197 APE--SLKDGVFTTSSDMWSFGVVLWEIT 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 120/281 (42%), Gaps = 34/281 (12%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS 253
LG+G FG K TG ++ +K ++ + + F+ EV + + H NV++ +G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 254 EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
+ + + E++ G+L I ++ + W + A A G+AYLH+ M I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 314 FDIKPHNILLDHNFIPKVSDFGLAKF------HP------KENDFVSISATRGTIGYIAP 361
D+ HN L+ N V+DFGLA+ P K+ D G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E+I N + K DV+ FG+VL E+ G + + Y P + LN G L+
Sbjct: 192 EMI--NGRSYDEKVDVFSFGIVLCEIIG--------RVNADPDYLPRTMDFGLNVRGFLD 241
Query: 422 LRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
I + C + RPS K+ LE
Sbjct: 242 ----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 192 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 245
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 14 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 246 VQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ G S G R LV E++P+G L F + ++ + +L + +G+ Y
Sbjct: 74 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR-LDASRLLLYSSQICKGMEY 129
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SATRGTIGYIAP 361
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 130 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEM 387
E +S N S +SDV+ FG+VL E+
Sbjct: 187 ESLSDNI--FSRQSDVWSFGVVLYEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 192 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 245
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 246 VQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ G S G R LV E++P+G L F + ++ + +L + +G+ Y
Sbjct: 87 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR-LDASRLLLYSSQICKGMEY 142
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SATRGTIGYIAP 361
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 143 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEM 387
E +S N S +SDV+ FG+VL E+
Sbjct: 200 ESLSDNI--FSRQSDVWSFGVVLYEL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 19/206 (9%)
Query: 192 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 245
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 15 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 246 VQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ G S G R LV E++P+G L F + ++ + +L + +G+ Y
Sbjct: 75 VKYRGV-SYGPGRQSLRLVMEYLPSGCL--RDFLQRHRAR-LDASRLLLYSSQICKGMEY 130
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SATRGTIGYIAP 361
L G C+ H D+ NIL++ K++DFGLAK P + D+ + + I + AP
Sbjct: 131 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEM 387
E +S N S +SDV+ FG+VL E+
Sbjct: 188 ESLSDNI--FSRQSDVWSFGVVLYEL 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+LG G FG VYK + TG L A K++E S+ E++I E+ + H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
K ++ EF P G++D I + ++G T ++Q + + +LH+ I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVD-AIMLELDRGLTEP--QIQVVCRQMLEALNFLHSK---RII 139
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 365
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 193
Query: 366 RNFGTVSCKSDVYGFGMVLLEMA 388
K+D++ G+ L+EMA
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMA 216
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 146
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 203
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 204 LESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK------ENKGQTFGWEKLQEIALG 295
H N+V LLG C+ G ++ E+ G L + K + G+ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+A+L CI H D+ N+LL + + K+ DFGLA+ +++++ R
Sbjct: 161 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 218 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK------ENKGQTFGWEKLQEIALG 295
H N+V LLG C+ G ++ E+ G L + K + G+ L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+A+L CI H D+ N+LL + + K+ DFGLA+ +++++ R
Sbjct: 169 VAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I TV +SDV+ +G++L E+
Sbjct: 226 VKWMAPESIFDCVYTV--QSDVWSYGILLWEI 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE V + + + + ++A
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMA 204
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 205 LESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 206 LESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+LG G FG VYK + TG L A K++E S+ E++I E+ + H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
K ++ EF P G++D I + ++G T ++Q + + +LH+ I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEP--QIQVVCRQMLEALNFLHSK---RII 131
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 365
H D+K N+L+ +++DFG++ K K + F+ GT ++APE++ +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI------GTPYWMAPEVVMCET 185
Query: 366 RNFGTVSCKSDVYGFGMVLLEMA 388
K+D++ G+ L+EMA
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMA 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 199 APE--SLKDGVFTTSSDMWSFGVVLWEIT 225
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 152 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 207
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 208 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 264
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 265 LESLQTQKFTT---KSDVWSFGVLLWEL 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 206
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 207 LESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 148
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 205
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 206 LESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H D+ N ++ H+F K+ DFG+ + + + + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 192 FTHKLGQGGFGSVYKGQL-----HTGRLIAVKMLENSKFSAE-EFINEVSTIGRIHHVNV 245
+ +LG+G FGSV + +TG L+AVK L++S + +F E+ + +H +
Sbjct: 11 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 246 VQLLGFCSEGSKRA---LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ G S G R LV E++P+G L F + ++ + +L + +G+ Y
Sbjct: 71 VKYRGV-SYGPGRPELRLVMEYLPSGCL--RDFLQRHRAR-LDASRLLLYSSQICKGMEY 126
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI-SATRGTIGYIAP 361
L G C+ H D+ NIL++ K++DFGLAK P + D + + I + AP
Sbjct: 127 L--GSRRCV-HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEM 387
E +S N S +SDV+ FG+VL E+
Sbjct: 184 ESLSDNI--FSRQSDVWSFGVVLYEL 207
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 98 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 153
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ + KE D V + + + + ++A
Sbjct: 154 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 210
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 211 LESLQTQKFTT---KSDVWSFGVLLWEL 235
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 199 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 204
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 205 ALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 112 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 167
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 168 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 223
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 224 ALESLQTQKFTT---KSDVWSFGVLLWEL 249
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 145 IVFLVFLIHKYRTTLQTVDNI------EKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQ 198
+V ++++ H+ R + + + ++ ++P + E+ + +LGQ
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEW---EVAREKITMSRELGQ 57
Query: 199 GGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLLG 250
G FG VY+G + +A+K + + E EF+NE S + + +VV+LLG
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 117
Query: 251 FCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTARGVAYLH 304
S+G ++ E M G L R + P+ K+ ++A A G+AYL+
Sbjct: 118 VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLN 177
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
+H D+ N ++ +F K+ DFG+ + + + + + +++PE
Sbjct: 178 AN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE-- 232
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMA 388
S G + SDV+ FG+VL E+A
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 148
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 206 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 85 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 140
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 141 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 196
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 197 ALESLQTQKFTT---KSDVWSFGVLLWEL 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 141
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 142 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 199 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 93 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 148
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 149 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 204
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 205 ALESLQTQKFTT---KSDVWSFGVLLWEL 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 111 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 166
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 167 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 222
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 223 ALESLQTQKFTT---KSDVWSFGVLLWEL 248
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 90 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 145
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 146 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 201
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 202 ALESLQTQKFTT---KSDVWSFGVLLWEL 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQLLGFC 252
+G GGF V + TG ++A+K+++ + ++ E+ + + H ++ QL
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+K +V E+ P G L +I ++ + E+ + + VAY+H+
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSE----EETRVVFRQIVSAVAYVHS---QGYA 130
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+KP N+L D K+ DFGL PK N + G++ Y APELI + +
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELI-QGKSYLG 188
Query: 373 CKSDVYGFGMVLLEMAGG 390
++DV+ G++L + G
Sbjct: 189 SEADVWSMGILLYVLMCG 206
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 92 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 147
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 148 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 203
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 204 ALESLQTQKFTT---KSDVWSFGVLLWEL 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVK--MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
KLG+G + +VYKG+ T L+A+K LE+ + + I EVS + + H N+V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV+E++ + L +++ ++ G ++ RG+AY H +
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYL---DDCGNIINMHNVKLFLFQLLRGLAYCHR---QKV 121
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV 371
LH D+KP N+L++ K++DFGLA+ K + T+ Y P+++ G+
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDIL---LGST 176
Query: 372 --SCKSDVYGFGMVLLEMAGGR 391
S + D++G G + EMA GR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 20 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 139
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 140 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 197 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 91 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 146
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 147 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 202
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 203 ALESLQTQKFTT---KSDVWSFGVLLWEL 228
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 104/209 (49%), Gaps = 23/209 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ Y
Sbjct: 88 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKY 143
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT---IGYI 359
L +H D+ N +LD F KV+DFGLA+ + ++ S+ G + ++
Sbjct: 144 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR-DMYDKEYYSVHNKTGAKLPVKWM 199
Query: 360 APE-LISRNFGTVSCKSDVYGFGMVLLEM 387
A E L ++ F T KSDV+ FG++L E+
Sbjct: 200 ALESLQTQKFTT---KSDVWSFGVLLWEL 225
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 190
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 191 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSL------------DRHIFPKENKGQTFGWEKL 289
H N+V LLG C+ G ++ E+ G L + P N + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 290 QEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
+ A+G+A+L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 169 LHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 350 SATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 261
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQL 248
K+G+G +G VYK + GR++A+K + + AE+ I E+S + +HH N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ LV+EFM D ENK +++ RGVA+ H
Sbjct: 85 IDVIHSERCLTLVFEFMEK---DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ--- 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SR 366
ILH D+KP N+L++ + K++DFGLA+ S + T+ Y AP+++ S+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSK 195
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGR 391
+ T D++ G + EM G+
Sbjct: 196 KYST---SVDIWSIGCIFAEMITGK 217
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 196 LGQGGFGSVY----KGQLHTGRLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 248
LGQG FG V+ + +G L A+K+L+ + + + E + ++H VV+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 249 -LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
F +EG K L+ +F+ G L F + +K F E ++ A G+ +LH+
Sbjct: 96 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLDHLHS-- 148
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 363
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC------GTVEYMAPEV 201
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWV 410
++R S +D + +G+++ EM G R M I +K P ++
Sbjct: 202 VNRQ--GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFL 253
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 193 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 196 LGQGGFGSVYKGQLH----TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG+G FGSV +G L T +AVK ++ +S+ EEF++E + + H NV++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 249 LGFCSEGS-----KRALVYEFMPNGSLDRHIFPK--ENKGQTFGWEKLQEIALGTARGVA 301
LG C E S K ++ FM G L ++ E + + L + + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
YL N LH D+ N +L + V+DFGL+K + + + + +IA
Sbjct: 162 YLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMA 388
E ++ T KSDV+ FG+ + E+A
Sbjct: 219 ESLADRVYT--SKSDVWAFGVTMWEIA 243
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 199
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 200 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQL 248
K+G+G +G VYK + GR++A+K + + AE+ I E+S + +HH N+V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI---RLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ LV+EFM D ENK +++ RGVA+ H
Sbjct: 85 IDVIHSERCLTLVFEFMEK---DLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQ--- 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SR 366
ILH D+KP N+L++ + K++DFGLA+ S + T+ Y AP+++ S+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSK 195
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGR 391
+ T D++ G + EM G+
Sbjct: 196 KYST---SVDIWSIGCIFAEMITGK 217
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 23 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + +
Sbjct: 143 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 199
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 200 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGR----LIAVKML-ENSKFSA-EEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G +A+K+L EN+ A +E ++E + + V +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C S LV + MP G L H+ +EN+G+ G + L + A+G++YL D
Sbjct: 85 LGICLT-STVQLVTQLMPYGCLLDHV--RENRGR-LGSQDLLNWCMQIAKGMSYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
+ ++H D+ N+L+ K++DFGLA+ + + I ++A E I R
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 FT--HQSDVWSYGVTVWEL 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 195 KLGQGGFGSVYKGQLHTGRL-IAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
KLG GG +VY + + +A+K + + + + F EV ++ H N+V ++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
E LV E++ +L +I E+ G + G+ + H DM
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI---ESHG-PLSVDTAINFTNQILDGIKHAH---DM 130
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H DIKP NIL+D N K+ DFG+AK E + GT+ Y +PE ++
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKA-LSETSLTQTNHVLGTVQYFSPEQ-AKGEA 188
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
T C +D+Y G+VL EM G
Sbjct: 189 TDEC-TDIYSIGIVLYEMLVGE 209
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 200 APE--SLKDGVFTTSSDMWSFGVVLWEIT 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPAFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 194 HKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHVNV 245
+LGQG FG VY+G +AVK + S E EF+NE S + +V
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQE---IALGTARG 299
V+LLG S+G +V E M +G L R + P+ LQE +A A G
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+AYL+ +H ++ N ++ H+F K+ DFG+ + + + + + ++
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMA 388
APE S G + SD++ FG+VL E+
Sbjct: 201 APE--SLKDGVFTTSSDMWSFGVVLWEIT 227
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P K+ ++A A
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 148
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 149 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 205
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 206 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSAE--EFINEVSTIGRIHHVN 244
HF +G+G FG VY G L + G+ I AVK L E +F+ E + H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 245 VVQLLGFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
V+ LLG C SEGS +V +M +G L R+ E T + L L A+G+ +
Sbjct: 94 VLSLLGICLRSEGSP-LVVLPYMKHGDL-RNFIRNETHNPTV--KDLIGFGLQVAKGMKF 149
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFV-SISATRGTIGYIA 360
L +H D+ N +LD F KV+DFGLA+ KE D V + + + + ++A
Sbjct: 150 L---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
Query: 361 PE-LISRNFGTVSCKSDVYGFGMVLLEM 387
E L ++ F T KSDV+ FG++L E+
Sbjct: 207 LESLQTQKFTT---KSDVWSFGVLLWEL 231
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 19 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P K+ ++A A
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 138
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N ++ +F K+ DFG+ + + + + +
Sbjct: 139 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 195
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 196 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 195 KLGQGGFGSVYKGQLHT------GRLIAVKMLENSKFSA-EEFINEVSTIGRIHHVNVVQ 247
+LG+G FG V+ + + L+AVK L+++ +A ++F E + + H ++V+
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRH---------IFPKENKGQTFGWEKLQEIALGTAR 298
G C EG +V+E+M +G L++ + + N ++ IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 299 GVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 358
G+ YL +H D+ N L+ N + K+ DFG+++ + + T I +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 359 IAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
+ PE ++ R F T +SDV+ G+VL E+
Sbjct: 197 MPPESIMYRKFTT---ESDVWSLGVVLWEI 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 192 FTHKLGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRIHHV 243
+ +LGQG FG VY+G + +A+K + + E EF+NE S + +
Sbjct: 16 MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFG---WEKLQEIALGTA 297
+VV+LLG S+G ++ E M G L R + P+ K+ ++A A
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 135
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
G+AYL+ +H D+ N + +F K+ DFG+ + + + + +
Sbjct: 136 DGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 192
Query: 358 YIAPELISRNFGTVSCKSDVYGFGMVLLEMA 388
+++PE S G + SDV+ FG+VL E+A
Sbjct: 193 WMSPE--SLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKEN----------KGQTFGWEKLQE 291
H N+V LLG C+ G ++ E+ G L + K T L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+ A+G+A+L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 169 FSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 196 LGQGGFGSVYKGQLHTG----RLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 248
LGQG FG V+ + +G +L A+K+L+ + + + E + ++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 249 -LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
F +EG K L+ +F+ G L F + +K F E ++ A + +LH+
Sbjct: 92 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 363
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 197
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWV 410
++R T S D + FG+++ EM G R M I +K P ++
Sbjct: 198 VNRRGHTQSA--DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 35/234 (14%)
Query: 196 LGQGGFGSVYKGQLHTG----RLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 248
LGQG FG V+ + +G +L A+K+L+ + + + E + ++H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 249 -LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
F +EG K L+ +F+ G L F + +K F E ++ A + +LH+
Sbjct: 92 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 144
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 363
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 197
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWV 410
++R T S +D + FG+++ EM G R M I +K P ++
Sbjct: 198 VNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 35/234 (14%)
Query: 196 LGQGGFGSVYKGQLHTG----RLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQL 248
LGQG FG V+ + +G +L A+K+L+ + + + E + ++H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 249 -LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
F +EG K L+ +F+ G L F + +K F E ++ A + +LH+
Sbjct: 93 HYAFQTEG-KLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLHS-- 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK----FHPKENDFVSISATRGTIGYIAPEL 363
+ I++ D+KP NILLD K++DFGL+K K F GT+ Y+APE+
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC------GTVEYMAPEV 198
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWV 410
++R T S +D + FG+++ EM G R M I +K P ++
Sbjct: 199 VNRRGHTQS--ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFL 250
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 29/210 (13%)
Query: 197 GQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 256
+G FG V+K QL +AVK+ + + E+ + + H N++Q + GS
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 257 KRA----LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC-- 310
L+ F GSL ++ KG W +L +A +RG++YLH C
Sbjct: 83 NLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 311 ------ILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIG---YIA 360
I H D K N+LL + ++DFGLA +F P + T G +G Y+A
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPP----GDTHGQVGTRRYMA 193
Query: 361 PELI--SRNFGTVS-CKSDVYGFGMVLLEM 387
PE++ + NF + + D+Y G+VL E+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWEL 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 132 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 185
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 16 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 76 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 131
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 132 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 185
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 147
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 201
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 202 YGP---EVDIWSLGIMVIEMVDG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 138
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 193 YGP---EVDIWSLGIMVIEMVDG 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 196 LGQGGFGSVYKGQLH--TGR----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 247
LG+G FG V K GR +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 248 LLGFCSEGSKRALVYEFMPNGSL------DRHIFP----------------KENKGQTFG 285
L G CS+ L+ E+ GSL R + P + + T G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 345
L A ++G+ YL +M ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 151 --DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 346 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQL--HTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG VY+G H G I V + K + E+F++E + + H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G E ++ E P G L ++ +N + L +L + +AYL + +
Sbjct: 76 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 128
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 185
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ F + + E+
Sbjct: 186 RFTTASDVWMFAVCMWEI 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 149
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 203
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 204 YGP---EVDIWSLGIMVIEMVDG 223
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 2 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 56
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 57 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 108
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 109 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 213
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 55
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 56 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 107
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 167
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 168 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 212
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 40 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 94
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 95 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 146
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 251
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 188 VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSA-------EEFINEVSTI 237
V +H+ +LG G F V K Q TG+ A K ++ + S+ EE EV+ +
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
I H N++ L + L+ E + G L + KE+ + + L++I
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----L 118
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATR 353
GV YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I
Sbjct: 119 DGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--- 172
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 173 GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKEN----------KGQTFGWEKLQE 291
H N+V LLG C+ G ++ E+ G L + K T L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
+ A+G+A+L CI H D+ N+LL + + K+ DFGLA+ +++++
Sbjct: 169 FSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE I TV +SDV+ +G++L E+
Sbjct: 226 ARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 259
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 192 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 242
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKENKG------QTFGWEK 288
+N+V LLG C+ G ++ E+ G L D I K + E
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 348
L + A+G+A+L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 349 ISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 227 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 26/217 (11%)
Query: 188 VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSA-------EEFINEVSTI 237
V +H+ +LG G F V K Q TG+ A K ++ + S+ EE EV+ +
Sbjct: 10 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
I H N++ L + L+ E + G L + KE+ + + L++I
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----L 125
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATR 353
GV YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I
Sbjct: 126 DGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--- 179
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT ++APE++ N+ + ++D++ G++ + G
Sbjct: 180 GTPEFVAPEIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQL--HTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG VY+G H G I V + K + E+F++E + + H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G E ++ E P G L ++ +N + L +L + +AYL + +
Sbjct: 80 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 132
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 189
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ F + + E+
Sbjct: 190 RFTTASDVWMFAVCMWEI 207
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 27 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 81
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 82 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 133
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 238
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ +VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 118/293 (40%), Gaps = 80/293 (27%)
Query: 169 LHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG------QLHTGRLIAVKMLEN 222
L Q +P S E LG+G FG V + + T R +AVKML+
Sbjct: 8 LDEQCERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKE 67
Query: 223 SKFSAE--EFINEVSTIGRI-HHVNVVQLLGFCS-EGSKRALVYEFMPNGSLDR------ 272
++E + E+ + I HH+NVV LLG C+ +G ++ E+ G+L
Sbjct: 68 GATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
Query: 273 -----------HIFPKENK------------------GQTFGWEKLQE------------ 291
H+ PK+ K ++F QE
Sbjct: 128 DLFFLNKDAALHMEPKKEKMEPGLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEED 187
Query: 292 ----------------IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFG 335
+ ARG+ +L + CI H D+ NILL N + K+ DFG
Sbjct: 188 SDGFYKEPITMEDLISYSFQVARGMEFLSS--RKCI-HRDLAARNILLSENNVVKICDFG 244
Query: 336 LAKFHPKENDFVSISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
LA+ K D+V TR + ++APE I F + S KSDV+ +G++L E+
Sbjct: 245 LARDIYKNPDYVRKGDTRLPLKWMAPESI---FDKIYSTKSDVWSYGVLLWEI 294
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGW------------EKLQEI 292
++ LLG C++ ++ E+ G+L ++ +E G + + + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQL--HTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG VY+G H G I V + K + E+F++E + + H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G E ++ E P G L ++ +N + L +L + +AYL + +
Sbjct: 92 GIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES---I 144
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI NIL+ K+ DFGL+++ E D+ S TR I +++PE I NF
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESI--NFR 201
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ F + + E+
Sbjct: 202 RFTTASDVWMFAVCMWEI 219
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 7 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 61
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 62 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 113
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 114 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 179 RYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE--FINEVS 235
R+ E I F LG G F V + T +L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +I H N+V L G L+ + + G L I K + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
V YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
GT GY+APE++++ S D + G++
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 191 HFTHKLGQGGFGSVYKGQLH----TGRLI--AVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + TG I AVKML+ S+E ++E+ + ++
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPK-----------ENKGQ-------- 282
H N+V LLG C+ L++E+ G L ++ K EN+ +
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 283 TFGWEKLQEIALGTARGVAYLH-NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 341
+E L A A+G+ +L C +H D+ N+L+ H + K+ DFGLA+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 342 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
++++V R + ++APE + G + KSDV+ +G++L E+
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFE--GIYTIKSDVWSYGILLWEI 267
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 142
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 197 YGP---EVDIWSLGIMVIEMVDG 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 192 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 242
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKENKG------QTFGWEK 288
+N+V LLG C+ G ++ E+ G L D I K + E
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 348
L + A+G+A+L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 163 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 349 ISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 220 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 256
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH 241
IA T +G+G FG V++G+ G +AVK+ E S F E V +
Sbjct: 4 IARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVM----LR 58
Query: 242 HVNVVQLLGFCSEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL 294
H N+ LGF + +K LV ++ +GSL F N+ T E + ++AL
Sbjct: 59 HENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNR-YTVTVEGMIKLAL 110
Query: 295 GTARGVAYLH-----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI 349
TA G+A+LH I H D+K NIL+ N ++D GLA H D + I
Sbjct: 111 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 350 SATR--GTIGYIAPELIS-----RNFGTVSCKSDVYGFGMVLLEMA 388
+ GT Y+APE++ ++F + ++D+Y G+V E+A
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFK-RADIYAMGLVFWEIA 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 179 RYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE--FINEVS 235
R+ E I F LG G F V + T +L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +I H N+V L G L+ + + G L I K + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
V YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
GT GY+APE++++ S D + G++
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 192 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 242
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKENKG------QTFGWEK 288
+N+V LLG C+ G ++ E+ G L D I K + E
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 348
L + A+G+A+L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 165 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 349 ISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 222 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 258
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 188 TRTF---SHASDTWMFGVTLWEM 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 134
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 192 TRTF---SHASDTWMFGVTLWEM 211
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLESK 134
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 135 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 192 TRTF---SHASDTWMFGVTLWEM 211
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 192 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 242
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKENKG------QTFGWEK 288
+N+V LLG C+ G ++ E+ G L D I K + E
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 348
L + A+G+A+L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 170 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 349 ISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 227 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 263
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G +G V K + TGR++A+K ++ K + + E+ + ++ H N+V LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 252 CSEGSKRALVYEFMPNGSLDR-HIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
C + + LV+EF+ + LD +FP ++ +Q+ G+ + H+
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCHS---HN 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I+H DIKP NIL+ + + K+ DFG A+ + T Y APEL+ +
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV--ATRWYRAPELLVGDV-K 201
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
DV+ G ++ EM G
Sbjct: 202 YGKAVDVWAIGCLVTEMFMG 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 179 RYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE--FINEVS 235
R+ E I F LG G F V + T +L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +I H N+V L G L+ + + G L I K + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
V YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
GT GY+APE++++ S D + G++
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%), Gaps = 38/240 (15%)
Query: 193 THKLGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA--------------EEFINEVSTI 237
KLG G +G V + G A+K+++ S+F EE NE+S +
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
+ H N+++L + LV EF G L I + + +++I
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI----L 156
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHN---FIPKVSDFGLAKFHPKENDFVSISATRG 354
G+ YLH I+H DIKP NILL++ K+ DFGL+ F K+ + G
Sbjct: 157 SGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD---YKLRDRLG 210
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMA------GGRRNSN-MNAIRSSKAYFP 407
T YIAPE++ + + K DV+ G+++ + GG+ + + + + K YF
Sbjct: 211 TAYYIAPEVLKKKYNE---KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 195 KLGQGGFGSVYKGQLHTGRL---IAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+LG G FGSV +G + +A+K+L+ K EE + E + ++ + +V+L+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G C + LV E G L + + K + + E+ + G+ YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLE---EK 129
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNF 368
+H D+ N+LL + K+SDFGL+K ++ + + SA + + + APE I NF
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--NF 187
Query: 369 GTVSCKSDVYGFGMVLLE 386
S +SDV+ +G+ + E
Sbjct: 188 RKFSSRSDVWSYGVTMWE 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 30/220 (13%)
Query: 192 FTHKLGQGGFGSVYKGQLH------TGRLIAVKMLENSKF--SAEEFINEVSTIGRI-HH 242
F LG G FG V + + +AVKML+ S E ++E+ + + +H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSL--------DRHIFPKENKG------QTFGWEK 288
+N+V LLG C+ G ++ E+ G L D I K + E
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS 348
L + A+G+A+L CI H D+ NILL H I K+ DFGLA+ ++++V
Sbjct: 147 LLSFSYQVAKGMAFL--ASKNCI-HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 349 ISATRGTIGYIAPELISRNFGTV-SCKSDVYGFGMVLLEM 387
R + ++APE I F V + +SDV+ +G+ L E+
Sbjct: 204 KGNARLPVKWMAPESI---FNCVYTFESDVWSYGIFLWEL 240
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 37/222 (16%)
Query: 196 LGQGGFGSVYKGQLH--TGR----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 247
LG+G FG V K GR +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 248 LLGFCSEGSKRALVYEFMPNGSL------DRHIFP----------------KENKGQTFG 285
L G CS+ L+ E+ GSL R + P + + T G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 345
L A ++G+ YL +M ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 151 --DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 346 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 269
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 323
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 324 YGP---EVDIWSLGIMVIEMVDG 343
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLES- 139
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 198 TRTF---SHASDTWMFGVTLWEM 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK------GQLHTGRLIAVKMLENSK--FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K G + + I + ++S+ S E+ EVS + I H NV
Sbjct: 17 EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + E L++I GV YLH+
Sbjct: 77 ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI----LNGVYYLHS 132
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+ I HFD+KP NI+L +P K+ DFGLA N+F +I GT ++AP
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF---GTPEFVAP 186
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSG 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLI--AVKMLENSKFSAEE----FINEVSTIGRIHHVNVV 246
KLG G FG V +G+ +G+ + AVK L+ S E FI EV+ + + H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L G + +V E P GSL + ++++G F L A+ A G+ YL +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRL--RKHQGH-FLLGTLSRYAVQVAEGMGYLES- 139
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPE-LI 364
+H D+ N+LL + K+ DFGL + P+ +D + R + APE L
Sbjct: 140 --KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 365 SRNFGTVSCKSDVYGFGMVLLEM 387
+R F S SD + FG+ L EM
Sbjct: 198 TRTF---SHASDTWMFGVTLWEM 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 141 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 198 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 230
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+LG G FG VYK Q T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EF G++D + E + ++Q + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 365
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 366 RNFGTVSCKSDVYGFGMVLLEMA 388
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+LG G FG VYK Q T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EF G++D + E + ++Q + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHP----KENDFVSISATRGTIGYIAPELI---S 365
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI------GTPYWMAPEVVMCET 211
Query: 366 RNFGTVSCKSDVYGFGMVLLEMA 388
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 179 RYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE--FINEVS 235
R+ E I F LG G F V + T +L+A+K + +E NE++
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +I H N+V L G L+ + + G L I K + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQ 124
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNIL---LDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
V YLH D+ I+H D+KP N+L LD + +SDFGL+K E+ +S
Sbjct: 125 VLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTA 178
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
GT GY+APE++++ S D + G++
Sbjct: 179 CGTPGYVAPEVLAQK--PYSKAVDCWSIGVI 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 149 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 206 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 238
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 209 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 266 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 298
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 145 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 202 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSVYKGQL-----HTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG+G FG V + +TG +AVK L E+ + E+ + ++H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 249 LGFCSE--GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C+E G+ L+ EF+P+GSL ++ +NK ++ + A+ +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGS- 132
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H D+ N+L++ K+ DFGL K + + ++ R + + + APE +
Sbjct: 133 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
++ ++ SDV+ FG+ L E+
Sbjct: 191 QSKFYIA--SDVWSFGVTLHEL 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + +++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 188 VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKF-------SAEEFINEVSTI 237
V +H+ +LG G F V K Q TG+ A K ++ + S EE EV+ +
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 238 GRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
I H N++ L + L+ E + G L + KE+ + + L++I
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI----L 139
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATR 353
GV YLH+ I HFD+KP NI+L +P K+ DFG+A N+F +I
Sbjct: 140 DGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--- 193
Query: 354 GTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
GT ++APE++ N+ + ++D++ G++
Sbjct: 194 GTPEFVAPEIV--NYEPLGLEADMWSIGVI 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSVYKGQL-----HTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG+G FG V + +TG +AVK L E+ + E+ + ++H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 249 LGFCSE--GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C+E G+ L+ EF+P+GSL ++ +NK ++ + A+ +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYLGS- 144
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H D+ N+L++ K+ DFGL K + + ++ R + + + APE +
Sbjct: 145 --RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
++ ++ SDV+ FG+ L E+
Sbjct: 203 QSKFYIA--SDVWSFGVTLHEL 222
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVY-----KGQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 248
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 249 LGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C + +++L V E++P GSL R P+ + G +L A G+AYLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL-RDYLPR----HSIGLAQLLLFAQQICEGMAYLHS- 135
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 136 --QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
SDV+ FG+ L E+
Sbjct: 194 EY--KFYYASDVWSFGVTLYEL 213
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 150 TYQLARGMEYL--ASQKCI-HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 207 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 148 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 205 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+LG G FG VYK Q T L A K+++ S+ E+++ E+ + H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ EF G++D + E + ++Q + T + YLH D I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKII 157
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELI---S 365
H D+K NIL + K++DFG++ + + + F+ GT ++APE++ +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI------GTPYWMAPEVVMCET 211
Query: 366 RNFGTVSCKSDVYGFGMVLLEMA 388
K+DV+ G+ L+EMA
Sbjct: 212 SKDRPYDYKADVWSLGITLIEMA 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 24/203 (11%)
Query: 195 KLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGFC 252
K+G+G G V + + G+L+AVK ++ K E + NEV + H NVV++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
G + +V EF+ G+L + E++ + L + ++ LH ++
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALSVLHA---QGVI 192
Query: 313 HFDIKPHNILLDHNFIPKVSDFG----LAKFHPKENDFVSISATRGTIGYIAPELISR-N 367
H DIK +ILL H+ K+SDFG ++K P+ V GT ++APELISR
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV------GTPYWMAPELISRLP 246
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+G + D++ G++++EM G
Sbjct: 247 YGP---EVDIWSLGIMVIEMVDG 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 27/207 (13%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 245
++G G +G+VYK + H+G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 246 VQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGV 300
V+L+ C+ K LV+E + D + + E ++++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 360
+LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYRA 179
Query: 361 PELISRNFGTVSCKSDVYGFGMVLLEM 387
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 35/226 (15%)
Query: 191 HFTHKLGQGGFGSVYK------GQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-H 241
F LG G FG V + G+ +AVKML+++ + E+ ++E+ + +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 242 HVNVVQLLGFCSEGSKRALVYEFMPNGSL--------------------DRHIFPKENKG 281
H N+V LLG C+ G ++ E+ G L D KE+ G
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED-G 152
Query: 282 QTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP 341
+ L + A+G+A+L CI H D+ N+LL + + K+ DFGLA+
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFL--ASKNCI-HRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 342 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+++++ R + ++APE I TV +SDV+ +G++L E+
Sbjct: 210 NDSNYIVKGNARLPVKWMAPESIFDCVYTV--QSDVWSYGILLWEI 253
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 155 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 212 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 244
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 37/222 (16%)
Query: 196 LGQGGFGSVYKGQLH--TGR----LIAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQ 247
LG+G FG V K GR +AVKML+ + +E + ++E + + +++H +V++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 248 LLGFCSEGSKRALVYEFMPNGSL------DRHIFP----------------KENKGQTFG 285
L G CS+ L+ E+ GSL R + P + + T G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 345
L A ++G+ YL +M ++H D+ NIL+ K+SDFGL++ +E+
Sbjct: 151 --DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 346 FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
V S R + ++A E + + T +SDV+ FG++L E+
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYT--TQSDVWSFGVLLWEI 245
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 18 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 71
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 130
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 131 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 185
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 186 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 152 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 209 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 241
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRI---------HHVN 244
++G G +G+VYK + H+G +A+K + +ST+ + H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 245 VVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
VV+L+ C+ K LV+E + D + + E ++++ RG
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ +LH C I+H D+KP NIL+ K++DFGLA+ + + ++++ T+ Y
Sbjct: 133 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTLWYR 186
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEM 387
APE++ ++ T + D++ G + EM
Sbjct: 187 APEVLLQS--TYATPVDMWSVGCIFAEM 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 196 LGQGGFGSVY-----KGQLHTGRLIAVKMLENSKFSA--EEFINEVSTIGRIHHVNVVQL 248
LG+G FG V TG ++AVK L+ + E+ + ++H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 249 LGFCSEGSKRA--LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C + +++ LV E++P GSL R P+ G +L A G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPR----HCVGLAQLLLFAQQICEGMAYLHA- 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H + N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 131 --QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 366 RNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
CK SDV+ FG+ L E+ + ++ +S F + + L
Sbjct: 189 ------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMTVLR 237
Query: 422 LRNVTEIESVIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSMDDLQ 469
L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 238 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 291
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 196 LGQGGFGSVY-----KGQLHTGRLIAVKMLENSKFSA--EEFINEVSTIGRIHHVNVVQL 248
LG+G FG V TG ++AVK L+ + E+ + ++H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 249 LGFCSEGSKRA--LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C + +++ LV E++P GSL R P+ G +L A G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSL-RDYLPR----HCVGLAQLLLFAQQICEGMAYLHA- 129
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H + N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 130 --QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 366 RNFGTVSCK----SDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
CK SDV+ FG+ L E+ + ++ +S F + + L
Sbjct: 188 ------ECKFYYASDVWSFGVTLYELL-----TYCDSNQSPHTKFTELIGHTQGQMTVLR 236
Query: 422 LRNVTEIESVIAR-KLCMIGLW-----CIQVKAADRPSMTKVLEMLEGSMDDLQ 469
L + E + R C ++ C + +A+ RP+ ++ +L+ + + Q
Sbjct: 237 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQEKYQ 290
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 25 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 78
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 137
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 138 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 193 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 82
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 197 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 33/225 (14%)
Query: 191 HFTHKLGQGGFGSVYKGQL------HTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHH 242
+ +G+G FG V++ + ++AVKML E S +F E + + +
Sbjct: 50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLD---RHIFP------------KENKGQTFGWE 287
N+V+LLG C+ G L++E+M G L+ R + P + + G
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 288 KLQ-----EIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 342
L IA A G+AYL + +H D+ N L+ N + K++DFGL++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 226
Query: 343 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ + + I ++ PE I N T +SDV+ +G+VL E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTT--ESDVWAYGVVLWEI 269
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 36 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 89
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 148
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 149 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 204 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 30 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 83
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 142
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 143 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 198 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVY-----KGQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 248
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 249 LGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C + +++L V E++P GSL R P+ + G +L A G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSL-RDYLPR----HSIGLAQLLLFAQQICEGMAYLHA- 135
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H ++ N+LLD++ + K+ DFGLAK P+ +++ + + + + APE +
Sbjct: 136 --QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
SDV+ FG+ L E+
Sbjct: 194 EY--KFYYASDVWSFGVTLYEL 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 245
++G G +G+VYK + H+G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 246 VQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGV 300
V+L+ C+ K LV+E + D + + E ++++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 360
+LH C I+H D+KP NIL+ K++DFGLA+ + + +++ T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYRA 179
Query: 361 PELISRNFGTVSCKSDVYGFGMVLLEM 387
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 29 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 82
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 142 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 197 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 21 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 74
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 133
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 134 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 188
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 189 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 130/271 (47%), Gaps = 33/271 (12%)
Query: 196 LGQGGFGSVYKG----QLHTGRL-IAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + T ++ +A+K+L + EF++E + + H ++V+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + LV + MP+G L ++ ++ G + L + A+G+ YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD---NIGSQLLLNWCVQIAKGMMYLE---E 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLA+ + + + I ++A E I ++
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--HY 193
Query: 369 GTVSCKSDVYGFGMVLLEMA--GGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVT 426
+ +SDV+ +G+ + E+ GG+ + I + + + D L KG L +
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGK---PYDGIPTRE------IPDLLEKGERLPQPPIC 244
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
I+ + M+ + C + A RP ++
Sbjct: 245 TID------VYMVMVKCWMIDADSRPKFKEL 269
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + + +
Sbjct: 197 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 254 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 286
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 22 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 75
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 134
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 135 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 190 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 114/267 (42%), Gaps = 38/267 (14%)
Query: 178 KRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSA--EE 229
K+ EI F +LG+ FG VYKG L + +A+K L++ EE
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE 75
Query: 230 FINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF---PKENKGQTFGW 286
F +E R+ H NVV LLG ++ ++++ + +G L + P + G T
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 135
Query: 287 EKLQ---------EIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLA 337
++ + A G+ YL + ++H D+ N+L+ K+SD GL
Sbjct: 136 RTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 338 KFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM--------AG 389
+ + + + + I ++APE I +G S SD++ +G+VL E+ G
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 250
Query: 390 GRRNSNMNAIRSSKAY-----FPSWVY 411
+ IR+ + P+WVY
Sbjct: 251 YSNQDVVEMIRNRQVLPCPDDCPAWVY 277
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + + +AVKML++ + + I+E+ + I H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIF------------PKENKGQTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ P N + + L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
A ARG+ YL CI H D+ N+L+ + + K++DFGLA+ + +
Sbjct: 156 AYQVARGMEYL--ASKKCI-HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG++L E+
Sbjct: 213 RLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEI 245
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 45 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 98
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 157
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 158 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 213 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 27/207 (13%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVNV 245
++G G +G+VYK + H+G +A+K + + EE + EV+ + R+ H NV
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLPISTVREVALLRRLEAFEHPNV 68
Query: 246 VQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGV 300
V+L+ C+ K LV+E + D + + E ++++ RG+
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHV---DQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 360
+LH C I+H D+KP NIL+ K++DFGLA+ + + + T+ Y A
Sbjct: 126 DFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV---TLWYRA 179
Query: 361 PELISRNFGTVSCKSDVYGFGMVLLEM 387
PE++ ++ T + D++ G + EM
Sbjct: 180 PEVLLQS--TYATPVDMWSVGCIFAEM 204
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 104
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 219 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 51 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 104
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 164 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 219 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
++G G FG+VY + + ++A+K + + S ++ I EV + ++ H N +Q
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G LV E+ + D K+ + ++ + G +G+AYLH+
Sbjct: 82 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAVTHGALQGLAYLHS---H 134
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDE 188
Query: 369 GTVSCKSDVYGFGMVLLEMAGGRRNS-NMNAIRS 401
G K DV+ G+ +E+A + NMNA+ +
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 222
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVY-----KGQLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQL 248
LG+G FG V TG ++AVK L+ + E+ + ++H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 249 LGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
G C + +L V E++P GSL R P+ + G +L A G+AYLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSL-RDYLPR----HSIGLAQLLLFAQQICEGMAYLHA- 152
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT-IGYIAPELIS 365
+H D+ N+LLD++ + K+ DFGLAK P+ ++ + + + + APE +
Sbjct: 153 --QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 366 RNFGTVSCKSDVYGFGMVLLEM 387
SDV+ FG+ L E+
Sbjct: 211 EY--KFYYASDVWSFGVTLYEL 230
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 106/205 (51%), Gaps = 18/205 (8%)
Query: 196 LGQGGFGSVYKG----QLHTGRL-IAVKMLENSKFSAE--EFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + T ++ +A+K+L + EF++E + + H ++V+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + LV + MP+G L ++ ++ G + L + A+G+ YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD---NIGSQLLLNWCVQIAKGMMYLE---E 158
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLA+ + + + I ++A E I ++
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI--HY 216
Query: 369 GTVSCKSDVYGFGMVLLEMA--GGR 391
+ +SDV+ +G+ + E+ GG+
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGK 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ + G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKG------------QTFGWEKLQEI 292
++ LLG C++ ++ E+ G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 192 FTHKLGQGGFGSVYKGQ-LHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
F KLG+GGF V + LH G A+K +L + + EE E +H N+++L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 250 GFC--SEGSKRA--LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+C G+K L+ F G+L I ++KG +++ + LG RG+ +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFG---LAKFHPKEN----DFVSISATRGTIGY 358
H D+KP NILL P + D G A H + + +A R TI Y
Sbjct: 153 KG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 359 IAPELIS-RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNM 396
APEL S ++ + ++DV+ G VL M G +M
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 93/200 (46%), Gaps = 19/200 (9%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENS---KFSAEEFIN-EVSTIGRIHHVNVVQLLG 250
LG G FG V+ H GR A+K+L+ + E N E + + H ++++ G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ +++ G L F K Q F + A + YLH+
Sbjct: 74 TFQDAQQIFMIMDYIEGGEL----FSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD--- 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I++ D+KP NILLD N K++DFG AK+ P + GT YIAPE++S
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYN 181
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
S D + FG+++ EM G
Sbjct: 182 KSI--DWWSFGILIYEMLAG 199
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 53 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 106
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 165
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 166 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 221 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 38/261 (14%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQL------HTGRLIAVKMLENSKFSA--EEFINEVS 235
EI F +LG+ FG VYKG L + +A+K L++ EEF +E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF---PKENKGQTFGWEKLQ-- 290
R+ H NVV LLG ++ ++++ + +G L + P + G T ++
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 291 -------EIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE 343
+ A G+ YL + ++H D+ N+L+ K+SD GL +
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA 181
Query: 344 NDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM--------AGGRRNSN 395
+ + + + I ++APE I +G S SD++ +G+VL E+ G
Sbjct: 182 DYYKLLGNSLLPIRWMAPEAIM--YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
Query: 396 MNAIRSSKAY-----FPSWVY 411
+ IR+ + P+WVY
Sbjct: 240 VEMIRNRQVLPCPDDCPAWVY 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
++G G FG+VY + + ++A+K + + S ++ I EV + ++ H N +Q
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G LV E+ + D K+ + ++ + G +G+AYLH+
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAVTHGALQGLAYLHS---H 173
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
++H D+K NILL + K+ DFG A N FV GT ++APE+I + +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV------GTPYWMAPEVILAMDE 227
Query: 369 GTVSCKSDVYGFGMVLLEMAGGRRNS-NMNAIRS 401
G K DV+ G+ +E+A + NMNA+ +
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA 261
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL N K++DFG + P + GT+ Y+ PE+I
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 187
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
K D++ G++ E G
Sbjct: 188 -DEKVDLWSLGVLCYEFLVG 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ +A GT Y++PEL++
Sbjct: 149 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 55 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 108
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 167
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 168 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 223 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 38/226 (16%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G +G V++G H G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRGLWH-GESVAVKIFSSRDEQSWFRETEIYNTV----LLRHDNI---LGF 67
Query: 252 CSE-------GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ ++ L+ + +GSL + + QT +A+ A G+A+LH
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLH 122
Query: 305 -----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 357
I H D K N+L+ N ++D GLA H + +D++ I + GT
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKR 182
Query: 358 YIAPELISRNFGTVSCKS----DVYGFGMVLLEMAGGRRNSNMNAI 399
Y+APE++ T +S D++ FG+VL E+A R + +N I
Sbjct: 183 YMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA---RRTIVNGI 225
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMH- 183
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 184 -DEKVDLWSLGVLCYEFLVGK 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVK-MLENSKFSAEEFINEVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K +L++ +F E + + ++
Sbjct: 96 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKL 149
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 208
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 209 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 264 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKK--- 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMH- 183
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 184 -DEKVDLWSLGVLCYEFLVGK 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 195 KLGQGGFGSVYKGQLHTGRL---IAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+LG G FGSV +G + +A+K+L+ K EE + E + ++ + +V+L+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G C + LV E G L + + K + + E+ + G+ YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLE---EK 455
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNF 368
+H ++ N+LL + K+SDFGL+K ++ + + SA + + + APE I NF
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI--NF 513
Query: 369 GTVSCKSDVYGFGMVLLE 386
S +SDV+ +G+ + E
Sbjct: 514 RKFSSRSDVWSYGVTMWE 531
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 17/200 (8%)
Query: 192 FTHKLGQGGFGSVYKGQLHTG---RLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
F KLG G FG V+ + + R+I + S+ E+ E+ + + H N++++
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E G L I + +G+ + E+ +AY H+
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS--- 142
Query: 309 MCILHFDIKPHNILLD----HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
++H D+KP NIL H+ I K+ DFGLA+ ++D S +A GT Y+APE+
Sbjct: 143 QHVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELF--KSDEHSTNAA-GTALYMAPEVF 198
Query: 365 SRNFGTVSCKSDVYGFGMVL 384
R+ V+ K D++ G+V+
Sbjct: 199 KRD---VTFKCDIWSAGVVM 215
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 18/200 (9%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCHS---KR 132
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL N K++DFG + P GT+ Y+ PE+I
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRMH- 187
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
K D++ G++ E G
Sbjct: 188 -DEKVDLWSLGVLCYEFLVG 206
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 196 LGQGGFGSVY--------KGQLHTGRLIAVKMLENSKFSAE--EFINEVSTIGRI-HHVN 244
LG+G FG V K + +AVKML++ + + ++E+ + I H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE------------KLQEI 292
++ LLG C++ ++ + G+L ++ + G + ++ L
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISAT 352
ARG+ YL CI H D+ N+L+ N + K++DFGLA+ + + +
Sbjct: 163 TYQLARGMEYL--ASQKCI-HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 353 RGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
R + ++APE L R + + +SDV+ FG+++ E+
Sbjct: 220 RLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEI 252
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P +A GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----AALCGTLDYLPPEMIEGRMHD 187
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 188 E--KVDLWSLGVLCYEFLVGK 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 11 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 70
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 184 K---SACKSSDLWALGCIIYQLVAG 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I +++H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 13 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 72
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 186 K---SACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 12 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 71
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 185 K---SACKSSDLWALGCIIYQLVAG 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGG 390
+ S SD++ G ++ ++ G
Sbjct: 209 K--SASKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 14 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 73
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 187 K---SACKSSDLWALGCIIYQLVAG 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVVQLLG 250
LG G FG V G+ TG +AVK+L K + + + E+ + H ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
S S +V E++ G L +I + Q+I GV Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL----SGVDYCHRHM--- 136
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRXSC--GSPNYAAPEVISGRL-Y 192
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
+ D++ G++L + G
Sbjct: 193 AGPEVDIWSSGVILYALLCG 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 24/234 (10%)
Query: 192 FTHKLGQGGFGSVYKGQL-HTGRLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNV 245
F LG+G FG V ++ TG L AVK+L+ ++ + T RI +H +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
QL + V EF+ G L HI K + F + + A + +LH
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHI----QKSRRFDEARARFYAAEIISALMFLH- 141
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
D I++ D+K N+LLDH K++DFG+ K + V+ + GT YIAPE++
Sbjct: 142 --DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEILQ 197
Query: 366 RNFGTVSCKSDVYGFGMVLLEMAGGR-------RNSNMNAIRSSKAYFPSWVYD 412
+ D + G++L EM G + AI + + +P+W+++
Sbjct: 198 EMLYGPAV--DWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 18 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 77
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 191 K---SACKSSDLWALGCIIYQLVAG 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 151
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ ++ GT Y++PEL++
Sbjct: 152 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVKMLENSKFSAEEFIN-EVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 154
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + +D GT+ Y+ PE+I
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRM 208
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 209 HDE--KVDLWSLGVLCYEFLVGK 229
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVKMLENSKFSAEEFIN-EVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 222 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 261
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 262 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 312
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR----TTLSGTLDYLPPEMIEGRMH- 184
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 185 -DEKVDLWSLGVLCYEFLVGK 204
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 33 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 92
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 206 K---SACKSSDLWALGCIIYQLVAG 227
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 115/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L +E F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 242 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 281
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 282 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 332
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRM 182
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 183 H--DEKVDLWSLGVLCYEFLVGK 203
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 230 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 269
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 270 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 320
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 187
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 188 E--KVDLWSLGVLCYEFLVGK 206
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 31/222 (13%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSVYKGQL-HTGRLIAVKMLENSKFSAEEFIN-EVSTIGRI 240
P+ ++ T+ T +G G FG VY+ +L +G L+A+K + K F N E+ + ++
Sbjct: 17 PQEVSYTD--TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGK----AFKNRELQIMRKL 70
Query: 241 HHVNVVQL-LGFCSEGSKRALVY-----EFMPNG--SLDRHIFPKENKGQTFGWEKLQEI 292
H N+V+L F S G K+ VY +++P + RH + + + + KL
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 293 ALGTARGVAYLHNGCDMCILHFDIKPHNILLDHN-FIPKVSDFGLAKFHPKENDFVSISA 351
L R +AY+H+ I H DIKP N+LLD + + K+ DFG AK + VS
Sbjct: 130 QL--FRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 352 TRGTIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
+R Y APELI FG S DV+ G VL E+ G+
Sbjct: 185 SR---YYRAPELI---FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + +D GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRM 185
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 186 H--DEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRM 182
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 183 HDE--KVDLWSLGVLCYEFLVGK 203
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 215 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 254
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 186
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 187 -DEKVDLWSLGVLCYEFLVGK 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 26/254 (10%)
Query: 148 LVFLIHKYRTTLQTVDNIEKFLHN---QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSV 204
L L H+Y + D ++ N Q W+ ++ + T LG+GGFG V
Sbjct: 145 LTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQ----PVTKNTFRQYRVLGKGGFGEV 200
Query: 205 YKGQLH-TGRLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQLLGFCSEGSKRA 259
Q+ TG++ A K LE + + +NE + +++ VV L
Sbjct: 201 CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260
Query: 260 LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEI--ALGTARGVAYLHNGCDMCILHFDIK 317
LV M G L HI+ + GQ G+ + + + A G+ LH I++ D+K
Sbjct: 261 LVLTLMNGGDLKFHIY---HMGQA-GFPEARAVFYAAEICCGLEDLHR---ERIVYRDLK 313
Query: 318 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDV 377
P NILLD + ++SD GLA P+ +I GT+GY+APE++ T S D
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFS--PDW 368
Query: 378 YGFGMVLLEMAGGR 391
+ G +L EM G+
Sbjct: 369 WALGCLLYEMIAGQ 382
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRM 183
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 184 HDE--KVDLWSLGVLCYEFLVGK 204
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 145
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 145
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 203
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 204 YYKFSSKSDVWSFGVLMWE 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI--N 187
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 188 YYKFSSKSDVWSFGVLMWE 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 215 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 254
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 255 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 127
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 182
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 183 -DEKVDLWSLGVLCYEFLVGK 202
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 192 FTHKLGQGGFGSVY-KGQLHTGRLIAVKMLENS-KFSAEEFINEVSTIGRIHHVNVVQLL 249
F LG G F V+ Q TG+L A+K ++ S F NE++ + +I H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCD 308
+ LV + + G L I + + +Q++ V YLH NG
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV----LSAVKYLHENG-- 126
Query: 309 MCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KP N+L + N ++DFGL+K ++N +S + GT GY+APE+++
Sbjct: 127 --IVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC--GTPGYVAPEVLA 180
Query: 366 RNFGTVSCKSDVYGFGMV 383
+ S D + G++
Sbjct: 181 QK--PYSKAVDCWSIGVI 196
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 216 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 255
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 256 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 207 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 246
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 247 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 297
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 184
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 116/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + + ++ P
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 232 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 271
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 272 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 322
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 133
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHP--KENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+LL K++DFG + P + D GT+ Y+ PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRM 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 188 HDE--KVDLWSLGVLCYEFLVGK 208
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 145
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 201
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 202 E--KVDLWSLGVLCYEFLVGK 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 173 QSWMPKRYSYPEIIAVTNHFT-------HKLGQGGFGSVYKGQLHTGR-LIAVKMLENSK 224
Q M P+I+ T HFT LG+G FG+VY + ++A+K+L S+
Sbjct: 3 QKVMENSSGTPDIL--TRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQ 60
Query: 225 FSAE----EFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENK 280
E + E+ +HH N+++L + + + L+ E+ P G L + + K
Sbjct: 61 IEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QK 116
Query: 281 GQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFH 340
TF ++ I A + Y H ++H DIKP N+LL K++DFG +
Sbjct: 117 SCTFDEQRTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHA 173
Query: 341 PKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
P + GT+ Y+ PE+I K D++ G++ E+ G
Sbjct: 174 PS----LRRKTMCGTLDYLPPEMIEGRMHNE--KVDLWCIGVLCYELLVG 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 143
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 201
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 202 YYKFSSKSDVWSFGVLMWE 220
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGS-VYKGQLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F + V +L T R A+K+LE E + E + R+ H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 148
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 149 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 207 K---SACKSSDLWALGCIIYQLVAG 228
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 115/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + ++ P
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 256 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 295
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 296 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 37 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 96
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 151
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 152 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 210 K---SACKSSDLWALGCIIYQLVAG 231
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 114/254 (44%), Gaps = 26/254 (10%)
Query: 148 LVFLIHKYRTTLQTVDNIEKFLHN---QQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSV 204
L L H+Y + D ++ N Q W+ ++ + T LG+GGFG V
Sbjct: 145 LTRLTHEYLSVAPFADYLDSIYFNRFLQWKWLERQ----PVTKNTFRQYRVLGKGGFGEV 200
Query: 205 YKGQLH-TGRLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQLLGFCSEGSKRA 259
Q+ TG++ A K LE + + +NE + +++ VV L
Sbjct: 201 CACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC 260
Query: 260 LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEI--ALGTARGVAYLHNGCDMCILHFDIK 317
LV M G L HI+ + GQ G+ + + + A G+ LH I++ D+K
Sbjct: 261 LVLTLMNGGDLKFHIY---HMGQA-GFPEARAVFYAAEICCGLEDLHR---ERIVYRDLK 313
Query: 318 PHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDV 377
P NILLD + ++SD GLA P+ +I GT+GY+APE++ T S D
Sbjct: 314 PENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFS--PDW 368
Query: 378 YGFGMVLLEMAGGR 391
+ G +L EM G+
Sbjct: 369 WALGCLLYEMIAGQ 382
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 132
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 187
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 188 -DEKVDLWSLGVLCYEFLVGK 207
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 41 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 100
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 155
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 156 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 214 K---SACKSSDLWALGCIIYQLVAG 235
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 133
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 154
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 210
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 211 E--KVDLWSLGVLCYEFLVGK 229
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEGRMH- 183
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 184 -DEKVDLWSLGVLCYEFLVGK 203
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 115/291 (39%), Gaps = 42/291 (14%)
Query: 196 LGQGGFGSVYKGQLH------TGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQ 247
LG G FG VY+GQ+ + +AVK L S+ +F+ E I + +H N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 248 LLGFCSEGSKRALVYEFMPNGSLD---RHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+G + R ++ E M G L R P+ ++ + L +A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 305 NGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
+H DI N LL + K+ DFG+A+ + + + ++ P
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLE 421
E G + K+D + FG++L E+ S Y P +K
Sbjct: 233 EAFME--GIFTSKTDTWSFGVLLWEIF-------------SLGYMP-----YPSKSNQEV 272
Query: 422 LRNVTEIESVIARKLC-----MIGLWCIQVKAADRPSMTKVLEMLEGSMDD 467
L VT + K C I C Q + DRP+ +LE +E D
Sbjct: 273 LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 323
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 26/203 (12%)
Query: 191 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVNVVQ 247
F LG G F V + TG+L AVK + +E NE++ + +I H N+V
Sbjct: 25 EFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 248 LLGFCSEGSKRALVYEFMPNGSL-DRHI---FPKENKGQTFGWEKLQEIALGTARGVAYL 303
L + LV + + G L DR + F E T + L V YL
Sbjct: 85 LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD--------AVYYL 136
Query: 304 HNGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIA 360
H M I+H D+KP N+L D +SDFGL+K K D +S + GT GY+A
Sbjct: 137 HR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK-GDVMSTAC--GTPGYVA 190
Query: 361 PELISRNFGTVSCKSDVYGFGMV 383
PE++++ S D + G++
Sbjct: 191 PEVLAQK--PYSKAVDCWSIGVI 211
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 39 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 98
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 153
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 154 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 212 K---SACKSSDLWALGCIIYQLVAG 233
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRMHD 184
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 185 E--KVDLWSLGVLCYEFLVGK 203
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 125
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 183
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 184 YYKFSSKSDVWSFGVLMWE 202
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
++G+G FG VYKG HT ++A+K+ LE ++ E+ E++ + + + + G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ +K ++ E++ GS + P + +T+ L+EI +G+ YLH+
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKPGPLE-ETYIATILREIL----KGLDYLHSERK--- 137
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELISRN 367
+H DIK N+LL K++DFG+A K N FV GT ++APE+I ++
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEVIKQS 191
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR-RNSNMNAIR 400
K+D++ G+ +E+A G NS+++ +R
Sbjct: 192 --AYDFKADIWSLGITAIELAKGEPPNSDLHPMR 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 193
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 194 YYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 129
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 187
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 188 YYKFSSKSDVWSFGVLMWE 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEGRMHD 185
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 186 E--KVDLWSLGVLCYEFLVGK 204
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 180
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 181 -DEKVDLWSLGVLCYEFLVGK 200
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCK-SDVYGFGMVLLEMAGG 390
+CK SD++ G ++ ++ G
Sbjct: 209 K---SACKSSDLWALGCIIYQLVAG 230
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHD 186
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 178 KRYSYPEIIAVTNHFTHKLGQGGFGSV-----YKGQLHTG-RLIAVKMLENSKFSAEEFI 231
KR+ P II T LG+G FG V YK Q + I+ ++L+ S
Sbjct: 5 KRHIGPYIIRET------LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMR-VE 57
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E+S + + H ++++L + + +V E+ G L +I K+ + G Q+
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQ 116
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISA 351
I + Y H I+H D+KP N+LLD N K++DFGL+ N F+ S
Sbjct: 117 IICA----IEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSC 168
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
G+ Y APE+I+ + DV+ G+VL M GR
Sbjct: 169 --GSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGR 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 17/199 (8%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 123
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 181
Query: 368 FGTVSCKSDVYGFGMVLLE 386
+ S KSDV+ FG+++ E
Sbjct: 182 YYKFSSKSDVWSFGVLMWE 200
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH- 186
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 187 -DEKVDLWSLGVLCYEFLVGK 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 15/199 (7%)
Query: 194 HKLGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLL 249
K+G+G FG ++ GR +K + S+ S+ EE EV+ + + H N+VQ
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
E +V ++ G L + I KG F +++ + + + ++H D
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVH---DR 144
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSIS-ATRGTIGYIAPELISRNF 368
ILH DIK NI L + ++ DFG+A+ N V ++ A GT Y++PE+
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTVELARACIGTPYYLSPEICENK- 200
Query: 369 GTVSCKSDVYGFGMVLLEM 387
+ KSD++ G VL E+
Sbjct: 201 -PYNNKSDIWALGCVLYEL 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 32/210 (15%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG---- 250
+G GGFG V+K + G+ +K + K++ E+ EV + ++ HVN+V G
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 75
Query: 251 ------FCSEGSKRA------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTAR 298
S+ S R+ + EF G+L++ I ++ +G+ E+ +
Sbjct: 76 FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQITK 133
Query: 299 GVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGY 358
GV Y+H+ +++ D+KP NI L K+ DFGL +ND ++GT+ Y
Sbjct: 134 GVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVT--SLKNDGKR-XRSKGTLRY 187
Query: 359 IAPELI-SRNFGTVSCKSDVYGFGMVLLEM 387
++PE I S+++G + D+Y G++L E+
Sbjct: 188 MSPEQISSQDYGK---EVDLYALGLILAEL 214
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI--NEVSTIGRIHHVNVVQLLGF 251
+LG G FG V++ + TGR+ K + N+ + +++ NE+S + ++HH ++ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFI-NTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC---- 307
+ + L+ EF+ G L I ++ K + A + Y+ C
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYK-------------MSEAEVINYMRQACEGLK 163
Query: 308 ---DMCILHFDIKPHNILLDHNFIP--KVSDFGLA-KFHPKENDFVSISATRGTIGYIAP 361
+ I+H DIKP NI+ + K+ DFGLA K +P E + T T + AP
Sbjct: 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----IVKVTTATAEFAAP 219
Query: 362 ELISRNFGTVSCKSDVYGFGMV 383
E++ R V +D++ G++
Sbjct: 220 EIVDRE--PVGFYTDMWAIGVL 239
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G ++ + K F ++ A ++Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHS---KR 133
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 189
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 199 GGFGSVYKGQ-LHTGRLIAVKMLEN-SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGS 256
G FG VYK Q T L A K+++ S+ E+++ E+ + H N+V+LL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 257 KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDI 316
++ EF G++D + E + ++Q + T + YLH D I+H D+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 134
Query: 317 KPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG---YIAPELI---SRNFGT 370
K NIL + K++DFG++ +N I IG ++APE++ +
Sbjct: 135 KAGNILFTLDGDIKLADFGVS----AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 371 VSCKSDVYGFGMVLLEMA 388
K+DV+ G+ L+EMA
Sbjct: 191 YDYKADVWSLGITLIEMA 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G ++ + K F ++ A ++Y H+
Sbjct: 81 YFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITELANALSYCHS---KR 133
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRMH- 188
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 189 -DEKVDLWSLGVLCYEFLVGK 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLL 249
+LG+G F SV + +H TG A K++ K SA +F E ++ H N+V+L
Sbjct: 12 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCD 308
E S LV++ + G L I +E + +Q+I +AY H NG
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAYCHSNG-- 124
Query: 309 MCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE++
Sbjct: 125 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 366 RNFGTVSCKSDVYGFGMVL 384
++ S D++ G++L
Sbjct: 180 KD--PYSKPVDIWACGVIL 196
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSA-------EEFINEVSTIGRIHHVNV 245
+LG G F V K + TG A K ++ + A EE EVS + ++ H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL----DGVNYLHT 133
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++AP
Sbjct: 134 KK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAP 187
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 188 EIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLL 249
+LG+G F SV + +H TG A K++ K SA +F E ++ H N+V+L
Sbjct: 13 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCD 308
E S LV++ + G L I +E + +Q+I +AY H NG
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAYCHSNG-- 125
Query: 309 MCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 366 RNFGTVSCKSDVYGFGMVL 384
++ S D++ G++L
Sbjct: 181 KD--PYSKPVDIWACGVIL 197
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P GT+ Y+ PE+I
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH- 183
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 184 -DEKVDLWSLGVLCYEFLVGK 203
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 246
+LG G F V K + TG A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLHTK 134
Query: 307 CDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K + TG A K ++ + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLHT 133
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++AP
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAP 187
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 188 EIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 224 KFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL---DRHIFPKENK 280
K ++F NE+ I I + + G + + ++YE+M N S+ D + F +
Sbjct: 84 KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN 143
Query: 281 GQTF-GWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKF 339
F + ++ I +Y+HN ++C H D+KP NIL+D N K+SDFG +++
Sbjct: 144 YTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC--HRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 340 HPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ I +RGT ++ PE S K D++ G+ L M
Sbjct: 202 MVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEE--FINEVSTIGRIHHVN-VVQLL 249
++G+G +GSV K +H +G+++AVK + ++ E+ + ++ + R +VQ
Sbjct: 29 EIGRGAYGSVNK-MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 250 GFCSEGSKRALVYEFMPNGSLDR-HIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
G + E M + S D+ + + E L +I L T + + +L +
Sbjct: 88 GALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE--N 144
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI--SR 366
+ I+H DIKP NILLD + K+ DFG++ + D ++ + G Y+APE I S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERIDPSA 201
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSW--VYDQLN---KGGDLE 421
+ +SDV+ G+ L E+A GR +P W V+DQL KG +
Sbjct: 202 SRQGYDVRSDVWSLGITLYELATGRFP------------YPKWNSVFDQLTQVVKGDPPQ 249
Query: 422 LRNVTEIE 429
L N E E
Sbjct: 250 LSNSEERE 257
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 13/185 (7%)
Query: 215 IAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LD 271
+A+K LE + S +E + E+ + + HH N+V + LV + + GS LD
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 272 --RHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFI 328
+HI K E+K + I G+ YLH +H D+K NILL +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 329 PKVSDFGLAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLL 385
+++DFG++ F D + GT ++APE++ + G K+D++ FG+ +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAI 218
Query: 386 EMAGG 390
E+A G
Sbjct: 219 ELATG 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLL 249
+LG+G F SV + +H TG A K++ K SA +F E ++ H N+V+L
Sbjct: 13 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCD 308
E S LV++ + G L I +E + +Q+I +AY H NG
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAYCHSNG-- 125
Query: 309 MCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE++
Sbjct: 126 --IVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 366 RNFGTVSCKSDVYGFGMVL 384
++ S D++ G++L
Sbjct: 181 KD--PYSKPVDIWACGVIL 197
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 220 LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-LD--RHIFP 276
LE + S +E + E+ + + HH N+V + LV + + GS LD +HI
Sbjct: 45 LEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVA 104
Query: 277 K-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFG 335
K E+K + I G+ YLH +H D+K NILL + +++DFG
Sbjct: 105 KGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFG 161
Query: 336 LAKFHPKENDFVSISATR---GTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ F D + GT ++APE++ + G K+D++ FG+ +E+A G
Sbjct: 162 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATG 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 246
+LG G F V K + TG A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLHTK 134
Query: 307 CDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 194 HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSK-------FSAEEFINEVSTIGRIHHVNV 245
+LG G F V K + TG A K ++ + S EE EVS + ++ H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLHT 133
Query: 306 GCDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAP 361
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++AP
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAP 187
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ N+ + ++D++ G++ + G
Sbjct: 188 EIV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 248
+G+G F V + TG+ AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
L S +V+EFM L I + + G + + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 309 MCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KP N+LL N P K+ DFG+A E+ V+ GT ++APE++
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 206
Query: 366 RN-FGTVSCKSDVYGFGMVLLEMAGG 390
R +G DV+G G++L + G
Sbjct: 207 REPYGK---PVDVWGCGVILFILLSG 229
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 14/204 (6%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI----NEVSTIGRIHHVNVV 246
F LG+G F +V +L T R A+K+LE E + E + R+ H V
Sbjct: 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 95
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+L + K + NG L ++I K +F + + YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHG- 150
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILL+ + +++DFG AK E+ + GT Y++PEL++
Sbjct: 151 --KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGG 390
S SD++ G ++ ++ G
Sbjct: 209 KSAXKS--SDLWALGCIIYQLVAG 230
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 171 NQQSW-MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKF 225
N+ +W +PK Y P TH +G G +GSV +G +A+K L S+
Sbjct: 16 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 65
Query: 226 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF---MPNGSLDRHIFPKENKGQ 282
A+ E+ + + H NV+ LL + S Y+F MP D ++ G
Sbjct: 66 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGL 121
Query: 283 TFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 342
F EK+Q + +G+ Y+H+ ++H D+KP N+ ++ + K+ DFGLA+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178
Query: 343 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 179 E-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 171 NQQSW-MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKF 225
N+ +W +PK Y P TH +G G +GSV +G +A+K L S+
Sbjct: 34 NKTAWELPKTYVSP---------TH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI 83
Query: 226 SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF---MPNGSLDRHIFPKENKGQ 282
A+ E+ + + H NV+ LL + S Y+F MP D ++ G
Sbjct: 84 FAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL----QKIMGM 139
Query: 283 TFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPK 342
F EK+Q + +G+ Y+H+ ++H D+KP N+ ++ + K+ DFGLA+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196
Query: 343 ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
E ++ T Y APE+I ++ + D++ G ++ EM G+
Sbjct: 197 E-----MTGYVVTRWYRAPEVI-LSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 26/216 (12%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
++G+G FG V+KG T +++A+K+++ ++ E+ E++ + + V + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 251 FCSEGSKRALVYEFMPNGS-LDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+GSK ++ E++ GS LD + F ++ + +G+ YLH+
Sbjct: 89 SYLKGSKLWIIMEYLGGGSALDLL------RAGPFDEFQIATMLKEILKGLDYLHSEKK- 141
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPELIS 365
+H DIK N+LL K++DFG+A K N FV GT ++APE+I
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEVIQ 193
Query: 366 RNFGTVSCKSDVYGFGMVLLEMAGGR-RNSNMNAIR 400
++ K+D++ G+ +E+A G NS+M+ +R
Sbjct: 194 QS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMR 227
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ S+D F + ++ +G+A+ H+
Sbjct: 72 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 247
H K+G+G +G VYK Q + G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
L + LV+E + + L + + E ++ + L G+AY H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH--- 117
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI-- 364
D +LH D+KP N+L++ K++DFGLA+ F + T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMG 174
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
S+ + T D++ G + EM G
Sbjct: 175 SKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 136
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 197 YT--HQSDVWSYGVTVWEL 213
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ S+D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKMLENSK-------FSAEEFINEVSTIGRIHHVNVV 246
+LG G F V K + TG A K ++ + S EE EVS + ++ H NV+
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
L + L+ E + G L + KE+ + +++I GV YLH
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYLHTK 134
Query: 307 CDMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
I HFD+KP NI+L IP K+ DFGLA H E D V GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA--HEIE-DGVEFKNIFGTPEFVAPE 188
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ N+ + ++D++ G++ + G
Sbjct: 189 IV--NYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 103/200 (51%), Gaps = 12/200 (6%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
+LG+G +G V K + + +G+++AVK + + S E+ ++ ++ + V G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ E M + SLD+ +KGQT + L +IA+ + + +LH+ +
Sbjct: 118 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 174
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR--NF 368
++H D+KP N+L++ K+ DFG++ + D V+ + G Y+APE I+ N
Sbjct: 175 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDSVAKTIDAGCKPYMAPERINPELNQ 231
Query: 369 GTVSCKSDVYGFGMVLLEMA 388
S KSD++ G+ ++E+A
Sbjct: 232 KGYSVKSDIWSLGITMIELA 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 136
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 197 YT--HQSDVWSYGVTVWEL 213
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 247
H K+G+G +G VYK Q + G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
L + LV+E + + L + + E ++ + L G+AY H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH--- 117
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELI-- 364
D +LH D+KP N+L++ K++DFGLA+ F + T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMG 174
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
S+ + T D++ G + EM G
Sbjct: 175 SKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 129
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 190 YT--HQSDVWSYGVTVWEL 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K+++FG + P + GT+ Y+ PE+I
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMHD 186
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 187 E--KVDLWSLGVLCYEFLVGK 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHSKR--- 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K+++FG + P + GT+ Y+ PE+I
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH- 186
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 187 -DEKVDLWSLGVLCYEFLVGK 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 139
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 200 YT--HQSDVWSYGVTVWEL 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 YT--HQSDVWSYGVTVWEL 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 145
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 206 YT--HQSDVWSYGVTVWEL 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 18/222 (8%)
Query: 190 NHFT--HKLGQGGFGSVYKGQLH-TGRLIAVKMLENSKF----SAEEFINEVSTIGRIHH 242
+HF +G+G FG V Q + T ++ A+K + K E+ + + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
+V L + +V + + G L H+ + F E ++ + Y
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDY 130
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
L N I+H D+KP NILLD + ++DF +A P+E I+ GT Y+APE
Sbjct: 131 LQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE---TQITTMAGTKPYMAPE 184
Query: 363 LISRNFGT-VSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSK 403
+ S G S D + G+ E+ GRR ++ + SSK
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ S+D F + ++ +G+A+ H+
Sbjct: 71 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 247
H K+G+G +G VYK Q + G A+K + K I E+S + + H N+V+
Sbjct: 5 HGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
L + LV+E + + L + + E ++ + L G+AY H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCH--- 117
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELI- 364
D +LH D+KP N+L++ K++DFGLA+ P I T+ Y AP+++
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV----TLWYRAPDVLM 173
Query: 365 -SRNFGTVSCKSDVYGFGMVLLEMAGG 390
S+ + T D++ G + EM G
Sbjct: 174 GSKKYSTT---IDIWSVGCIFAEMVNG 197
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ S+D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 199 YT--HQSDVWSYGVTVWEL 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 199 YT--HQSDVWSYGVTVWEL 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 YT--HQSDVWSYGVTVWEL 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 45/223 (20%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG---- 250
+G GGFG V+K + G+ ++ + K++ E+ EV + ++ HVN+V G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDG 76
Query: 251 ----------------FCSEGSKRA---------LVYEFMPNGSLDRHIFPKENKGQTFG 285
+ E SK + + EF G+L++ I ++ +G+
Sbjct: 77 FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLD 134
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND 345
E+ +GV Y+H+ ++H D+KP NI L K+ DFGL +ND
Sbjct: 135 KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVT--SLKND 189
Query: 346 FVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEM 387
+ ++GT+ Y++PE I S+++G + D+Y G++L E+
Sbjct: 190 GKR-TRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILAEL 228
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%), Gaps = 40/244 (16%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV----------- 243
LGQG FG V K + R A+K + +++ ++EV + ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 244 --NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE-NKGQTFGWEKLQEIALGTARGV 300
N V+ + + S + E+ NG+L I + N+ + W ++I +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EAL 129
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------S 348
+Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + +
Sbjct: 130 SYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 349 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNAIRSSK 403
+++ GT Y+A E++ G + K D+Y G++ EM G R + + +RS
Sbjct: 187 LTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS 245
Query: 404 AYFP 407
FP
Sbjct: 246 IEFP 249
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 199 YT--HQSDVWSYGVTVWEL 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L ++ + EV + H N+++L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ L+ E+ P G++ R + K F ++ A ++Y H+
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALSYCHS---KR 133
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H DIKP N+LL K++DFG + P + GT+ Y+ PE I
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXHD 189
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
K D++ G++ E G+
Sbjct: 190 E--KVDLWSLGVLCYEFLVGK 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 141
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 202 YT--HQSDVWSYGVTVWEL 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 138
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 199 YT--HQSDVWSYGVTVWEL 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 160
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 221 YT--HQSDVWSYGVTVWEL 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 251
K+GQG G+VY + TG+ +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
G + +V E++ GSL + ++GQ + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSNQ--- 136
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK-- 191
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V K Q +G ++A K+ LE + I E+ + + +V G
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 82
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + + + E L ++++ RG+AYL I
Sbjct: 83 FYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLREKHQ--I 136
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y+APE R G
Sbjct: 137 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMAPE---RLQG 187
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+E+A GR
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGR 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 43/263 (16%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 487
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 545
Query: 368 FGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNAI--RSSKAYFPS---------- 408
+ S KSDV+ FG+++ E G + S + A+ + + P+
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLM 605
Query: 409 ---WVYDQLNKGG----DLELRN 424
W YD N+ G +L LRN
Sbjct: 606 NLCWTYDVENRPGFAAVELRLRN 628
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 203 YT--HQSDVWSYGVTVWEL 219
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 43/263 (16%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIA------VKMLENSKFSAEEFINEVSTIGRIHHVNVVQL 248
+LG G FG+V KG +++ +K N +E + E + + ++ + +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+G C E LV E G L++++ + + + + E+ + G+ YL +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLE---E 488
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRN 367
+H D+ N+LL K+SDFGL+K EN + + + + + + APE I N
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI--N 546
Query: 368 FGTVSCKSDVYGFGMVLLEMAG-------GRRNSNMNAI--RSSKAYFPS---------- 408
+ S KSDV+ FG+++ E G + S + A+ + + P+
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLM 606
Query: 409 ---WVYDQLNKGG----DLELRN 424
W YD N+ G +L LRN
Sbjct: 607 NLCWTYDVENRPGFAAVELRLRN 629
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRL--IAVKMLE----NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G I V ++E S + +E ++E + + + +V +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 169
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 230 YT--HQSDVWSYGVTVWEL 246
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFIN---EVSTIGRIHHVNVVQLL 249
+LG+G F SV + +H TG A K++ K SA +F E ++ H N+V+L
Sbjct: 36 ELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCD 308
E S LV++ + G L I +E + +Q+I +AY H NG
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----LESIAYCHSNG-- 148
Query: 309 MCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H ++KP N+LL K++DFGLA + ND + GT GY++PE++
Sbjct: 149 --IVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 366 RNFGTVSCKSDVYGFGMVL 384
++ S D++ G++L
Sbjct: 204 KD--PYSKPVDIWACGVIL 220
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 97/201 (48%), Gaps = 14/201 (6%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLE-----NSKFSAEEFINEVSTIGRIHHVNVVQL 248
K+G+G F VY+ L G +A+K ++ ++K A+ I E+ + +++H NV++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARAD-CIKEIDLLKQLNHPNVIKY 97
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
E ++ +V E G L R I + + + + + + + ++H+
Sbjct: 98 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS--- 154
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H DIKP N+ + + K+ D GL +F + + + GT Y++PE I N
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHEN- 211
Query: 369 GTVSCKSDVYGFGMVLLEMAG 389
+ KSD++ G +L EMA
Sbjct: 212 -GYNFKSDIWSLGCLLYEMAA 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 102/200 (51%), Gaps = 12/200 (6%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLG 250
+LG+G +G V K + + +G+++AVK + + S E+ ++ ++ + V G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ E M + SLD+ +KGQT + L +IA+ + + +LH+ +
Sbjct: 74 ALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR--NF 368
++H D+KP N+L++ K+ DFG++ + D V+ G Y+APE I+ N
Sbjct: 131 VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDIDAGCKPYMAPERINPELNQ 187
Query: 369 GTVSCKSDVYGFGMVLLEMA 388
S KSD++ G+ ++E+A
Sbjct: 188 KGYSVKSDIWSLGITMIELA 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 251
K+GQG G+VY + TG+ +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
G + +V E++ GSL + ++GQ + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSNQ--- 136
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK-- 191
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 251
K+GQG G+VY + TG+ +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
G + +V E++ GSL + ++GQ + + + + +LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSNQ--- 137
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SXMVGTPYWMAPEVVTRK-- 192
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
K D++ G++ +EM G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 251
K+GQG G+VY + TG+ +A++ + + +E I NE+ + + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
G + +V E++ GSL + ++GQ + + + + +LH+
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSNQ--- 136
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H DIK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---SEMVGTPYWMAPEVVTRK-- 191
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
K D++ G++ +EM G
Sbjct: 192 AYGPKVDIWSLGIMAIEMIEG 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNV 245
IA ++G+G +G V+ G+ G +AVK+ ++ ++ E+ + H N+
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI 93
Query: 246 VQLLGFCSEGS----KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVA 301
+ + +G+ + L+ ++ NGSL ++ K T + + ++A + G+
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLC 148
Query: 302 YLHNGC-----DMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATR-G 354
+LH I H D+K NIL+ N ++D GLA KF N+ TR G
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 355 TIGYIAPEL----ISRNFGTVSCKSDVYGFGMVLLEMA 388
T Y+ PE+ ++RN +D+Y FG++L E+A
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A G+ YL D
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAEGMNYLE---D 132
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 133 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 193 YT--HQSDVWSYGVTVWEL 209
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G V+K + TG+++A+K E+ + + E+ + ++ H N+V LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKG------QTFGWEKLQEIALGTARGVAYLH 304
+ LV+E+ + L H + +G ++ W+ LQ A + H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQ------AVNFCHKH 121
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
N CI H D+KP NIL+ + + K+ DFG A+ +D+ T Y +PEL+
Sbjct: 122 N----CI-HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV--ATRWYRSPELL 174
Query: 365 --SRNFGTVSCKSDVYGFGMVLLEMAGG 390
+G DV+ G V E+ G
Sbjct: 175 VGDTQYGP---PVDVWAIGCVFAELLSG 199
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 196 LGQGGFGSVYKGQLHTG---RLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
+G+G FG VY G+ H RLI ++ + A F EV + H NVV +G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKA--FKREVMAYRQTRHENVVLFMGAC 98
Query: 253 SEGSKRALVYEFMPNGSL-----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
A++ +L D I NK ++IA +G+ YLH
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK--------TRQIAQEIVKGMGYLHA-- 148
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHP-----KENDFVSISATRGTIGYIAPE 362
ILH D+K N+ D+ + ++DFGL + D + I G + ++APE
Sbjct: 149 -KGILHKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQ--NGWLCHLAPE 204
Query: 363 LISR-------NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
+I + + S SDV+ G + E+ ++ ++ A W Q+
Sbjct: 205 IIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL-----HAREWPFKTQPAEAIIW---QMG 256
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLEMLE 462
G L + + +++ I L+C + +RP+ TK+++MLE
Sbjct: 257 TGMKPNLSQIG-----MGKEISDILLFCWAFEQEERPTFTKLMDMLE 298
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+ + + L+ EF P G L +H E + TF ++E+A LH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----MEELADA-------LHYC 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGG 390
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L S+ E + E+ + H N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+ + + L+ EF P G L +H E + TF ++E+A LH
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----MEELADA-------LHYC 131
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 187
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGG 390
T K D++ G++ E G
Sbjct: 188 K--THDEKVDLWCAGVLCYEFLVG 209
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 26/204 (12%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKFSAE----EFINEVSTIGRIHHVNVVQLLG 250
LG+G FG+VY + + I A+K+L S+ E + E+ + H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
+ + + L+ EF P G L +H E + TF ++E+A LH
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----MEELADA-------LHYC 130
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
+ ++H DIKP N+L+ + K++DFG + P + GT+ Y+ PE+I
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDYLPPEMIEG 186
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGG 390
T K D++ G++ E G
Sbjct: 187 K--THDEKVDLWCAGVLCYEFLVG 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 251
LG+G FG V K + T + AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ S +V E G L F + K + F I G+ Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 312 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
+H D+KP NILL + + K+ DFGL+ + + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR--- 196
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 251
LG+G FG V K + T + AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ S +V E G L F + K + F I G+ Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNI 142
Query: 312 LHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
+H D+KP NILL + + K+ DFGL+ + + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLR--- 196
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 26/205 (12%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQLLGF 251
LG+G FG V K + T + AVK++ + ++ + EV + ++ H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ S +V E G L F + K + F I G+ Y+H I
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 312 LHFDIKPHNILL---DHNFIPKVSDFGLA---KFHPKENDFVSISATRGTIGYIAPELIS 365
+H D+KP NILL + + K+ DFGL+ + + K D + GT YIAPE++
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI------GTAYYIAPEVLR 196
Query: 366 RNFGTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 197 ---GTYDEKCDVWSAGVILYILLSG 218
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQLHT----GRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 139
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 200 YT--HQSDVWSYGVTVWEL 216
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVY--KGQLHTGRLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQL 248
KLG G +G V K +L TG A+K+++ S + ++EV+ + ++ H N+++L
Sbjct: 28 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
F + LV E G L I ++ + ++++ GT YLH
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT----YLHK--- 139
Query: 309 MCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KP N+LL+ + + K+ DFGL+ + GT YIAPE++
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLR 196
Query: 366 RNFGTVSCKSDVYGFGMVL 384
+ + K DV+ G++L
Sbjct: 197 KKYDE---KCDVWSCGVIL 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL-LGXKY 180
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D++ G + EM R
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQLHT----GRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
L G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 YT--HQSDVWSYGVTVWEL 214
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 135
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 196 YT--HQSDVWSYGVTVWEL 212
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFIN----EVSTIGRIHHVNVVQLLG 250
LG G FG V G+ TG +AVK+L K + + + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
S + +V E++ G L +I + Q+I V Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHR---HM 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTSC--GSPNYAAPEVISGRL-Y 187
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 YT--HQSDVWSYGVTVWEL 214
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 23/199 (11%)
Query: 195 KLGQGGFGSVY--KGQLHTGRLIAVKMLENSKFSAEE----FINEVSTIGRIHHVNVVQL 248
KLG G +G V K +L TG A+K+++ S + ++EV+ + ++ H N+++L
Sbjct: 11 KLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
F + LV E G L I + Q F I G YLH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDAAVIMKQVLSGTTYLHK--- 122
Query: 309 MCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KP N+LL+ + + K+ DFGL+ + GT YIAPE++
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG---KMKERLGTAYYIAPEVLR 179
Query: 366 RNFGTVSCKSDVYGFGMVL 384
+ + K DV+ G++L
Sbjct: 180 KKYDE---KCDVWSCGVIL 195
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKG----QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 184
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 185 RFTSASDVWMFGVCMWEI 202
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
L G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 203 YT--HQSDVWSYGVTVWEL 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 28/240 (11%)
Query: 158 TLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYK-GQLHTGRLIA 216
TLQ +E FL +Q + E I+ +LG G G V+K +G ++A
Sbjct: 2 TLQQRKRLEAFLTQKQKVGELKDDDFEKIS-------ELGAGNGGVVFKVSHKPSGLVMA 54
Query: 217 VKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
K+ LE + I E+ + + +V G + ++ E M GSLD+ +
Sbjct: 55 RKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL 114
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
K + L ++++ +G+ YL I+H D+KP NIL++ K+ DF
Sbjct: 115 ----KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDF 168
Query: 335 GLAK--FHPKENDFVSISATRGTIGYIAPELISRNFGT-VSCKSDVYGFGMVLLEMAGGR 391
G++ N FV GT Y++PE R GT S +SD++ G+ L+EMA GR
Sbjct: 169 GVSGQLIDSMANSFV------GTRSYMSPE---RLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 137
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 198 YT--HQSDVWSYGVTVWEL 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIHHVNVVQLLGF 251
K+GQG G+VY + TG+ +A++ + + +E I NE+ + + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPK-ENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
G + +V E++ GSL + ++GQ + + + + +LH+
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQ------IAAVCRECLQALEFLHSNQ--- 137
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGL-AKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H +IK NILL + K++DFG A+ P+++ S GT ++APE+++R
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---STMVGTPYWMAPEVVTRK-- 192
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
K D++ G++ +EM G
Sbjct: 193 AYGPKVDIWSLGIMAIEMIEG 213
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
L G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFGLAK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 203 YT--HQSDVWSYGVTVWEL 219
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+LH D+KP N+L++ K++DFGLA+ F + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL----- 178
Query: 370 TVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 -LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKG----QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 215
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 216 RFTSASDVWMFGVCMWEI 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKG----QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 189
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 190 RFTSASDVWMFGVCMWEI 207
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 16/199 (8%)
Query: 196 LGQGGFGSVYKG-QLHTGRLI----AVKMLE--NSKFSAEEFINEVSTIGRIHHVNVVQL 248
LG G FG+VYKG + G + A+K L S + +E ++E + + + +V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
LG C + + L+ + MP G L ++ +E+K G + L + A+G+ YL D
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYV--REHK-DNIGSQYLLNWCVQIAKGMNYLE---D 142
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
++H D+ N+L+ K++DFG AK E + I ++A E I
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 369 GTVSCKSDVYGFGMVLLEM 387
T +SDV+ +G+ + E+
Sbjct: 203 YT--HQSDVWSYGVTVWEL 219
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 127
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 179
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 95/201 (47%), Gaps = 13/201 (6%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 77 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL-LGXKY 187
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D++ G + EM R
Sbjct: 188 YSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 176
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQLHT----GRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 192
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 193 RFTSASDVWMFGVCMWEI 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKG----QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFL---QVRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ N K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 190
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 191 RFTSASDVWMFGVCMWEI 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 77 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 182
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 113/243 (46%), Gaps = 18/243 (7%)
Query: 152 IHKYRTTLQTVDNIEKFLHNQQSW-MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG--- 207
+ + ++ D+ + + + ++ MP Y EI +G+G FG V++G
Sbjct: 354 VRSHTVSVSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 208 -QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF 264
+ +A+K +N S E+F+ E T+ + H ++V+L+G +E ++ E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMEL 471
Query: 265 MPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLD 324
G L + + + + L A + +AYL + +H DI N+L+
Sbjct: 472 CTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVS 525
Query: 325 HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
N K+ DFGL+++ +++ + S + I ++APE I NF + SDV+ FG+ +
Sbjct: 526 SNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCM 582
Query: 385 LEM 387
E+
Sbjct: 583 WEI 585
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 174
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 --LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHV----------- 243
LGQG FG V K + R A+K + +++ ++EV + ++H
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 244 --NVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKE-NKGQTFGWEKLQEIALGTARGV 300
N V+ + + S + E+ N +L I + N+ + W ++I +
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EAL 129
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------S 348
+Y+H+ I+H D+KP NI +D + K+ DFGLAK + D + +
Sbjct: 130 SYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 349 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNAIRSSK 403
+++ GT Y+A E++ G + K D+Y G++ EM G R + + +RS
Sbjct: 187 LTSAIGTAMYVATEVLD-GTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVS 245
Query: 404 AYFP 407
FP
Sbjct: 246 IEFP 249
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 196 LGQGGFGSVYKG----QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--IGYIAPELISRN 367
+H DI N+L+ N K+ DFGL+++ D A++G I ++APE I N
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIKWMAPESI--N 185
Query: 368 FGTVSCKSDVYGFGMVLLEM 387
F + SDV+ FG+ + E+
Sbjct: 186 FRRFTSASDVWMFGVCMWEI 205
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 195 KLGQGGFGSVY---KGQLHTGRLIAV-KMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
KLG G +G V H R I + + S S + + EV+ + + H N+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
F + LV E G L I + F I GV YLH
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHK---HN 156
Query: 311 ILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+LL + + + K+ DFGL+ + + GT YIAPE++ +
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLRKK 213
Query: 368 FGTVSCKSDVYGFGMVLLEMAGG 390
+ K DV+ G++L + G
Sbjct: 214 YDE---KCDVWSIGVILFILLAG 233
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G +G V++G G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENI---LGF 67
Query: 252 CSE-------GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ ++ L+ + GSL ++ + T I L A G+A+LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 305 -----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 357
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 358 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 388
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 183 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFIN----EVSTIGRIHHVNVVQLLG 250
LG G FG V G+ TG +AVK+L K + + + E+ + H ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
S + +V E++ G L +I + Q+I V Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL----SAVDYCHR---HM 131
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRDSC--GSPNYAAPEVISGRL-Y 187
Query: 371 VSCKSDVYGFGMVLLEMAGG 390
+ D++ G++L + G
Sbjct: 188 AGPEVDIWSCGVILYALLCG 207
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 175
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 --LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G +G V++G G +AVK+ E S F E N V + H N+ LGF
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVM----LRHENI---LGF 67
Query: 252 CSE-------GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ ++ L+ + GSL ++ + T I L A G+A+LH
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 305 -----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 357
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 358 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 388
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 183 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 74 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 127
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+LH D+KP N+L++ K++DFGLA+ F + T+ Y APE++
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV---TLWYRAPEIL----- 179
Query: 370 TVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 180 -LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 71 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 124
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 125 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 176
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 177 --LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 72 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 126 VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 177
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 178 --LGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 25/213 (11%)
Query: 188 VTNHFTHKLGQGGFGSVYKG----QLHTGRLIAVKMLE--NSKFSAEEFINEVSTIGRIH 241
V H +G+G FG VY G Q A+K L E F+ E + ++
Sbjct: 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN 80
Query: 242 HVNVVQLLGFC--SEGSKRALVYEFMPNGSLDRHIF-PKENKGQTFGWEKLQEIALGTAR 298
H NV+ L+G EG L+ +M +G L + I P+ N + L L AR
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTV----KDLISFGLQVAR 135
Query: 299 GVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT--- 355
G+ YL + +H D+ N +LD +F KV+DFGLA+ + ++ S+ R
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR-DILDREYYSVQQHRHARLP 191
Query: 356 IGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEM 387
+ + A E L + F T KSDV+ FG++L E+
Sbjct: 192 VKWTALESLQTYRFTT---KSDVWSFGVLLWEL 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 248
+G+G F V + TG+ AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
L S +V+EFM L I + + G + + Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 309 MCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++APE++
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 206
Query: 366 RN-FGTVSCKSDVYGFGMVLLEMAGG 390
R +G DV+G G++L + G
Sbjct: 207 REPYGK---PVDVWGCGVILFILLSG 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 35/238 (14%)
Query: 196 LGQGGFGSVYKGQ----LHTGRLIAVKMLE------NSKFSAEEFINEVSTIGRIHHVNV 245
LG+GG+G V++ + +TG++ A+K+L+ N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKG---QTFGWEKLQEIALGTARGVAY 302
V L+ G K L+ E++ G L + E +G + L EI++ + +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA----LGH 136
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+APE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPE 191
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWVYDQ 413
++ R+ + D + G ++ +M G R ++ I K P ++ +
Sbjct: 192 ILMRSGHNRAV--DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQE 247
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 247
K+GQG FG V+K + TG+ +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 248 LLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
L+ C + LV++F + L ++ K F +++ +
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLL 135
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 355
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 356 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 387
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 247
K+GQG FG V+K + TG+ +A+K ++EN K E F + E+ + + H NVV
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 80
Query: 248 LLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
L+ C + LV++F + L ++ K F +++ +
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLL 134
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 355
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 135 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 356 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 387
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 192 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 196 LGQGGFGSVY--KGQLHTGRLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG V K ++ TG+ AVK++ K E + EV + ++ H N+++L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
F + LV E G L I ++ F I G+ Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 146
Query: 310 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 200
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 201 ---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 36/214 (16%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 247
K+GQG FG V+K + TG+ +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 248 LLGFCSEGSK-----RA---LVYEFMPN--GSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
L+ C + +A LV++F + L ++ K F +++ +
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLL 135
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 355
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 356 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 387
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 186 IAVTNHFTHKLGQGGFGSVYKGQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRI-HHV 243
IA TN +G G FG V++ +L +A+K +L++ +F E I RI H
Sbjct: 40 IAYTN--CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL-----QIMRIVKHP 92
Query: 244 NVVQLLGF-CSEGSKRA-----LVYEFMPNG--SLDRHIFPKENKGQTFGWEKLQEIALG 295
NVV L F S G K+ LV E++P RH QT ++
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHY---AKLKQTMPMLLIKLYMYQ 149
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKENDFVSISATRG 354
R +AY+H+ + I H DIKP N+LLD + + K+ DFG AK VS +R
Sbjct: 150 LLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSR- 205
Query: 355 TIGYIAPELISRNFGTVSCKS--DVYGFGMVLLEMAGGR 391
Y APELI FG + + D++ G V+ E+ G+
Sbjct: 206 --YYRAPELI---FGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 196 LGQGGFGSVY--KGQLHTGRLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG V K ++ TG+ AVK++ K E + EV + ++ H N+++L
Sbjct: 40 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
F + LV E G L I ++ F I G+ Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 152
Query: 310 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 153 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 206
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 207 H---GTYDEKCDVWSTGVILYILLSG 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+++ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G+GGFG VY + TG++ A+K L+ + ++ G +N +L S
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLALNERIMLSLVST 248
Query: 255 GS---------------KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
G K + + + M G L H+ ++ F ++ A G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ ++HN +++ D+KP NILLD + ++SD GLA K+ S+ GT GY+
Sbjct: 305 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYM 357
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
APE++ + S +D + G +L ++ G
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G+GGFG VY + TG++ A+K L+ + ++ G +N +L S
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLALNERIMLSLVST 248
Query: 255 GS---------------KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
G K + + + M G L H+ ++ F ++ A G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ ++HN +++ D+KP NILLD + ++SD GLA K+ S+ GT GY+
Sbjct: 305 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYM 357
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
APE++ + S +D + G +L ++ G
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRG 387
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 36/214 (16%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVK--MLENSKFSAEEF----INEVSTIGRIHHVNVVQ 247
K+GQG FG V+K + TG+ +A+K ++EN K E F + E+ + + H NVV
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVN 81
Query: 248 LLGFCSEGSKRA--------LVYEFMPN--GSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
L+ C + LV++F + L ++ K F +++ +
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK------FTLSEIKRVMQMLL 135
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATR-GT 355
G+ Y+H ILH D+K N+L+ + + K++DFGLA+ F +N + R T
Sbjct: 136 NGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 356 IGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 387
+ Y PEL+ R++G D++G G ++ EM
Sbjct: 193 LWYRPPELLLGERDYGP---PIDLWGAGCIMAEM 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKI 129
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKE--NDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ E N+FV GT Y++PE R G
Sbjct: 130 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV------GTRSYMSPE---RLQG 180
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 35/238 (14%)
Query: 196 LGQGGFGSVYKGQ----LHTGRLIAVKMLE------NSKFSAEEFINEVSTIGRIHHVNV 245
LG+GG+G V++ + +TG++ A+K+L+ N+K +A E + + + H +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHT-KAERNILEEVKHPFI 83
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKG---QTFGWEKLQEIALGTARGVAY 302
V L+ G K L+ E++ G L + E +G + L EI++ + +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLAEISMA----LGH 136
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
LH I++ D+KP NI+L+H K++DFGL K +D GTI Y+APE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPE 191
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEM-------AGGRRNSNMNAIRSSKAYFPSWVYDQ 413
++ R+ + D + G ++ +M G R ++ I K P ++ +
Sbjct: 192 ILMRSGHNRAV--DWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQE 247
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 37/216 (17%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G +G V++G G +AVK+ E S F E N V + H N+ LGF
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTV----MLRHENI---LGF 96
Query: 252 CSE-------GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ ++ L+ + GSL ++ + T I L A G+A+LH
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 305 -----NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI--SATRGTIG 357
I H D+K NIL+ N ++D GLA H + + + + + GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 358 YIAPELISRNFGTVSC-----KSDVYGFGMVLLEMA 388
Y+APE++ V C + D++ FG+VL E+A
Sbjct: 212 YMAPEVLDETI-QVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIA---VKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A +++ ++ I E+S + ++H N+V+LL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 70 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 123
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 175
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIA---VKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A +++ ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+EF+ D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEFLHQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 196 LGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 252
LG+G F S+ + +H + + AVK++ SK E++ + H N+V+L
Sbjct: 19 LGEGSF-SICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ LV E + G L F + K + F + I V+++H D+ ++
Sbjct: 76 HDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVV 128
Query: 313 HFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
H D+KP N+L + N K+ DFG A+ P +N + T+ Y APEL+++N
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF--TLHYAAPELLNQNGY 186
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
SC D++ G++L M G+
Sbjct: 187 DESC--DLWSLGVILYTMLSGQ 206
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G+GGFG VY + TG++ A+K L+ + ++ G +N +L S
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLALNERIMLSLVST 247
Query: 255 GS---------------KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
G K + + + M G L H+ ++ F ++ A G
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 303
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ ++HN +++ D+KP NILLD + ++SD GLA K+ S+ GT GY+
Sbjct: 304 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYM 356
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
APE++ + S +D + G +L ++ G
Sbjct: 357 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRG 386
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 36/211 (17%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G+GGFG VY + TG++ A+K L+ + ++ G +N +L S
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--------GETLALNERIMLSLVST 248
Query: 255 GS---------------KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
G K + + + M G L H+ ++ F ++ A G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ ++HN +++ D+KP NILLD + ++SD GLA K+ S+ GT GY+
Sbjct: 305 LEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GTHGYM 357
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
APE++ + S +D + G +L ++ G
Sbjct: 358 APEVLQKGVAYDSS-ADWFSLGCMLFKLLRG 387
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 248
+G+G F V + TG+ AVK+++ +KF S E+ E S + H ++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
L S +V+EFM L I + + G + + Y H D
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 150
Query: 309 MCILHFDIKPHNILL--DHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KPH +LL N P K+ FG+A E+ V+ GT ++APE++
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA-GGRVGTPHFMAPEVVK 208
Query: 366 RN-FGTVSCKSDVYGFGMVLLEMAGG 390
R +G DV+G G++L + G
Sbjct: 209 REPYGK---PVDVWGCGVILFILLSG 231
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLREKHK--I 126
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 177
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKI 188
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 189 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 239
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 26/227 (11%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V H + +A+K + S F + + + E+ + R H NV+ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKI--SPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ A+ ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLY-KLLKSQQLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+L++ K+ DFGLA+ E+D ++ T Y APE++ + G
Sbjct: 165 VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKG 224
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVY-DQLN 415
D++ G +L EM S++ FP Y DQLN
Sbjct: 225 YTKS-IDIWSVGCILAEML------------SNRPIFPGKHYLDQLN 258
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 195 KLGQGGFGSVYKGQ--LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 244
++G+G +G V+K + + GR +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 245 VVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
VV+L C+ +K LV+E + + L ++ G E ++++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG--VPTETIKDMMFQLLRG 132
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ +LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEM 387
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 28/208 (13%)
Query: 195 KLGQGGFGSVYKGQ--LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 244
++G+G +G V+K + + GR +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 245 VVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
VV+L C+ +K LV+E + D + + E ++++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQ---DLTTYLDKVPEPGVPTETIKDMMFQLLRG 132
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ +LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEM 387
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 195 KLGQGGFGSVYKGQ--LHTGRLIAVKMLENSKFSAEE-----FINEVSTIGRIH---HVN 244
++G+G +G V+K + + GR +A+K + + EE I EV+ + + H N
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 245 VVQLLGFCS-----EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
VV+L C+ +K LV+E + + L ++ G E ++++ RG
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG--VPTETIKDMMFQLLRG 132
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ +LH+ ++H D+KP NIL+ + K++DFGLA+ + + S+ T+ Y
Sbjct: 133 LDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV---TLWYR 186
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEM 387
APE++ ++ + + D++ G + EM
Sbjct: 187 APEVLLQS--SYATPVDLWSVGCIFAEM 212
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+LG G G V+K +G ++A K+ LE + I E+ + + +V G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ ++ E M GSLD+ + K + L ++++ +G+ YL I
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKI 153
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK--FHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H D+KP NIL++ K+ DFG++ N FV GT Y++PE R G
Sbjct: 154 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV------GTRSYMSPE---RLQG 204
Query: 370 T-VSCKSDVYGFGMVLLEMAGGR 391
T S +SD++ G+ L+EMA GR
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 196 LGQGGFGSVY--KGQLHTGRLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG V K ++ TG+ AVK++ K E + EV + ++ H N+++L
Sbjct: 57 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
F + LV E G L I ++ F I G+ Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 169
Query: 310 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 170 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 223
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 224 ---HGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 196 LGQGGFGSVY--KGQLHTGRLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG V K ++ TG+ AVK++ K E + EV + ++ H N+++L
Sbjct: 58 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
F + LV E G L I ++ F I G+ Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNK-- 170
Query: 310 CILHFDIKPHNILL-----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+KP N+LL D N ++ DFGL+ + GT YIAPE++
Sbjct: 171 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVL 224
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT K DV+ G++L + G
Sbjct: 225 ---HGTYDEKCDVWSTGVILYILLSG 247
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 35/293 (11%)
Query: 176 MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEE---FI 231
MP R E++ + +G G +G K + + G+++ K L+ + E +
Sbjct: 1 MPSRAEDYEVL-------YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV 53
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKL 289
+EV+ + + H N+V+ + + L V E+ G L I + Q E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 290 QEIALGTARGVAYLHNGCD--MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 347
+ + H D +LH D+KP N+ LD K+ DFGLA+ + DF
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 348 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFP 407
GT Y++PE ++R + + KSD++ G +L E+ A P
Sbjct: 174 KEFV--GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELC---------------ALMP 214
Query: 408 SWV-YDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLE 459
+ + Q G + I + +L I + +K RPS+ ++LE
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 29/208 (13%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G FG V+KG T +++A+K+ LE ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFP---KENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ +K ++ E++ GS + P E + T L+EI +G+ YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI----LREIL----KGLDYLHSEK 124
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 363
+H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 175
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I ++ K+D++ G+ +E+A G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARGE 201
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 16/198 (8%)
Query: 196 LGQGGFGSVYKGQLHT----GRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G+G FG V++G + +A+K +N S E+F+ E T+ + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
G +E ++ E G L + + + + L A + +AYL +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
+H DI N+L+ K+ DFGL+++ +++ + S + I ++APE I NF
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFR 187
Query: 370 TVSCKSDVYGFGMVLLEM 387
+ SDV+ FG+ + E+
Sbjct: 188 RFTSASDVWMFGVCMWEI 205
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 196 LGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQL 248
LG+G FG V K HT G+ +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E+ N D +I ++ + Q+I V Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK- 123
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
I+H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 124 --IVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC--GSPNYAAPEVISGKL 178
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
+ DV+ G++L M R
Sbjct: 179 -YAGPEVDVWSCGVILYVMLCRR 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 22/221 (9%)
Query: 184 EIIAVTNHFT--HKLGQGGFGSVYKGQL--HTGRLI--AVKMLENSKFSA---EEFINEV 234
+++ FT LG+G FGSV + QL G + AVKML+ ++ EEF+ E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 235 STIGRIHHVNVVQLLGFCSEGSKRA------LVYEFMPNGSLDRHIFPKENKGQTFGW-- 286
+ + H +V +L+G + ++ FM +G L + F
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 287 EKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDF 346
+ L + A G+ YL + +H D+ N +L + V+DFGL++ + +
Sbjct: 137 QTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 347 VSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
A++ + ++A E ++ N TV SDV+ FG+ + E+
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTV--HSDVWAFGVTMWEI 232
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 178 KRYSYPEIIA-----VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEE 229
K+Y YP+ + V +H+ +LG G FG V++ + TG A K + S +E
Sbjct: 35 KQY-YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 230 FI-NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEK 288
+ E+ T+ + H +V L + ++ ++YEFM G L + + NK ++
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDE 150
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKEND 345
E +G+ ++H +H D+KP NI+ + K+ DFGL A PK+
Sbjct: 151 AVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 205
Query: 346 FVSISATRGTIGYIAPEL 363
S+ T GT + APE+
Sbjct: 206 --SVKVTTGTAEFAAPEV 221
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 29/208 (13%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G FG V+KG T +++A+K+ LE ++ E+ E++ + + V + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFP---KENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ +K ++ E++ GS + P E + T L+EI +G+ YLH+
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI----LREIL----KGLDYLHSEK 124
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 363
+H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEV 175
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I ++ K+D++ G+ +E+A G
Sbjct: 176 IKQS--AYDSKADIWSLGITAIELARGE 201
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 23/198 (11%)
Query: 178 KRYSYPEIIA-----VTNHFT--HKLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEE 229
K+Y YP+ + V +H+ +LG G FG V++ + TG A K + S +E
Sbjct: 141 KQY-YPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 230 FI-NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEK 288
+ E+ T+ + H +V L + ++ ++YEFM G L + + NK ++
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK---MSEDE 256
Query: 289 LQEIALGTARGVAYLHNGCDMCILHFDIKPHNILL--DHNFIPKVSDFGL-AKFHPKEND 345
E +G+ ++H + +H D+KP NI+ + K+ DFGL A PK+
Sbjct: 257 AVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-- 311
Query: 346 FVSISATRGTIGYIAPEL 363
S+ T GT + APE+
Sbjct: 312 --SVKVTTGTAEFAAPEV 327
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+MP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 192 FTHKLGQGGFG--SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
F +G G FG + + +L T L+AVK +E E E+ + H N+V+
Sbjct: 24 FVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFK 82
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ A++ E+ G L I N G+ F ++ + GV+Y H+ M
Sbjct: 83 EVILTPTHLAIIMEYASGGELYERIC---NAGR-FSEDEARFFFQQLLSGVSYCHS---M 135
Query: 310 CILHFDIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELI 364
I H D+K N LLD + P K+ DFG +K H + +T GT YIAPE++
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVL 189
Query: 365 SRNF--GTVSCKSDVYGFGMVLLEMAGG 390
R G + +DV+ G+ L M G
Sbjct: 190 LRQEYDGKI---ADVWSCGVTLYVMLVG 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+E + D F + ++ +G+A+ H+
Sbjct: 69 VIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR--- 122
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
+LH D+KP N+L++ K++DFGLA+ + + T+ Y APE++
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEIL------ 174
Query: 371 VSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 33/209 (15%)
Query: 196 LGQGGFGSVY--KGQLHTGRLIAVKMLEN----SKFSAEEFINEVSTIGRIHHVNVVQLL 249
LG+G FG V K ++ TG+ AVK++ K E + EV + ++ H N+ +L
Sbjct: 34 LGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
F + LV E G L I ++ F I G+ Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYXHKNK-- 146
Query: 310 CILHFDIKPHNILL-----DHNFIPKVSDFGLA---KFHPKENDFVSISATRGTIGYIAP 361
I+H D+KP N+LL D N ++ DFGL+ + K D + GT YIAP
Sbjct: 147 -IVHRDLKPENLLLESKSKDANI--RIIDFGLSTHFEASKKXKDKI------GTAYYIAP 197
Query: 362 ELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
E++ GT K DV+ G++L + G
Sbjct: 198 EVL---HGTYDEKCDVWSTGVILYILLSG 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 40/235 (17%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQ 247
+LG GGFG V + TG +A+K E S + E + E+ + +++H NVV
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 248 LLGFCSEGSKRA------LVYEFMPNGSLDRHIFPKENK-GQTFGWEKLQEIALGTARGV 300
K A L E+ G L +++ EN G G ++ + + +
Sbjct: 77 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG--PIRTLLSDISSAL 134
Query: 301 AYLHNGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKE---NDFVSISATRG 354
YLH I+H D+KP NI+L I K+ D G AK + +FV G
Sbjct: 135 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV------G 185
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSW 409
T+ Y+APEL+ + TV+ D + FG + E G R + P+W
Sbjct: 186 TLQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 100/235 (42%), Gaps = 40/235 (17%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKML--ENSKFSAEEFINEVSTIGRIHHVNVVQ 247
+LG GGFG V + TG +A+K E S + E + E+ + +++H NVV
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 248 LLGFCSEGSKRA------LVYEFMPNGSLDRHIFPKENK-GQTFGWEKLQEIALGTARGV 300
K A L E+ G L +++ EN G G ++ + + +
Sbjct: 78 AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG--PIRTLLSDISSAL 135
Query: 301 AYLHNGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKE---NDFVSISATRG 354
YLH I+H D+KP NI+L I K+ D G AK + +FV G
Sbjct: 136 RYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFV------G 186
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSW 409
T+ Y+APEL+ + TV+ D + FG + E G R + P+W
Sbjct: 187 TLQYLAPELLEQKKYTVTV--DYWSFGTLAFECITGFR-----------PFLPNW 228
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 152 IHKYRTTLQTVDNIEKFLHNQQSW-MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG--- 207
+ + ++ D+ + + + ++ MP Y EI +G+G FG V++G
Sbjct: 354 VRSHTVSVSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYM 412
Query: 208 -QLHTGRLIAVKMLEN--SKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEF 264
+ +A+K +N S E+F+ E T+ + H ++V+L+G +E ++ E
Sbjct: 413 SPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPV-WIIMEL 471
Query: 265 MPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLD 324
G L + + + + L A + +AYL + +H DI N+L+
Sbjct: 472 CTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVS 525
Query: 325 HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
K+ DFGL+++ +++ + S + I ++APE I NF + SDV+ FG+ +
Sbjct: 526 ATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESI--NFRRFTSASDVWMFGVCM 582
Query: 385 LEM 387
E+
Sbjct: 583 WEI 585
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 196 LGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQL 248
LG+G FG V K HT G+ +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E+ N D +I ++ + Q+I V Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHR--- 125
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
I+H D+KP N+LLD + K++DFGL+ + +F+ S G+ Y APE+IS
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSC--GSPNYAAPEVISGKL 182
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
+ DV+ G++L M R
Sbjct: 183 -YAGPEVDVWSCGVILYVMLCRR 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 196 LGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQL 248
LG+G FG V K HT G+ +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E+ N D +I ++ + Q+I V Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHRHK- 133
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
I+H D+KP N+LLD + K++DFGL+ N F+ S G+ Y APE+IS
Sbjct: 134 --IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC--GSPNYAAPEVISGKL 188
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
+ DV+ G++L M R
Sbjct: 189 -YAGPEVDVWSCGVILYVMLCRR 210
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 29/208 (13%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G FG V+KG T +++A+K+ LE ++ E+ E++ + + V + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFP---KENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ +K ++ E++ GS + P E + T L+EI +G+ YLH+
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI----LREIL----KGLDYLHSEK 144
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 363
+H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV------GTPFWMAPEV 195
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I ++ K+D++ G+ +E+A G
Sbjct: 196 IKQS--AYDSKADIWSLGITAIELARGE 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 196 LGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFIN-----EVSTIGRIHHVNVVQL 248
LG+G FG V K HT G+ +A+K++ N K A+ + E+S + + H ++++L
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVALKII-NKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E+ N D +I ++ + Q+I V Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEARRFFQQII----SAVEYCHR--- 130
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
I+H D+KP N+LLD + K++DFGL+ N F+ S G+ Y APE+IS
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSC--GSPNYAAPEVISGKL 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
+ DV+ G++L M R
Sbjct: 188 -YAGPEVDVWSCGVILYVMLCRR 209
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 29/208 (13%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G FG V+KG T +++A+K+ LE ++ E+ E++ + + V + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFP---KENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ +K ++ E++ GS + P E + T L+EI +G+ YLH+
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI----LREIL----KGLDYLHSEK 139
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLA----KFHPKENDFVSISATRGTIGYIAPEL 363
+H DIK N+LL + K++DFG+A K N FV GT ++APE+
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV------GTPFWMAPEV 190
Query: 364 ISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
I ++ K+D++ G+ +E+A G
Sbjct: 191 IKQS--AYDSKADIWSLGITAIELARGE 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 194 HKLGQGGFGSVYKGQ-LHTGRLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
K+G+G +G+V+K + T ++A+K + ++ + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 250 GFCSEGSKRALVYEFMP----------NGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
K LV+EF NG LD I ++F ++ L+ + +R
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCHSRN 121
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
V LH D+KP N+L++ N K++DFGLA+ SA T+ Y
Sbjct: 122 V-----------LHRDLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYR 168
Query: 360 APELISRNFGT--VSCKSDVYGFGMVLLEMAGGRR 392
P+++ FG S D++ G + E+A R
Sbjct: 169 PPDVL---FGAKLYSTSIDMWSAGCIFAELANAAR 200
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+MP G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 216 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 275
AVK+++ SK E I + G+ H N++ L +G LV E M G L I
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 276 PKENKGQTFGWEKLQEIALGT-ARGVAYLHNGCDMCILHFDIKPHNIL-LDHNFIP---K 330
Q F E+ L T + V YLH+ ++H D+KP NIL +D + P +
Sbjct: 114 -----RQKFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLR 165
Query: 331 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L+ A++ + T R+ H + L
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 215
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F ++ + + YLH+ +
Sbjct: 216 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS--EKN 269
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYG 327
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 328 RA---VDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L+ A++ + T R+ H + L
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 218
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F ++ + + YLH+ +
Sbjct: 219 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS--EKN 272
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKTFCGTPEYLAPEVLEDNDYG 330
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 331 RA---VDWWGLGVVMYEMMCGR 349
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 97/215 (45%), Gaps = 18/215 (8%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI- 240
P++ + LG+G FG V + TGR A+K+L A++ + T R+
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 241 ---HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
H + L + V E+ G L H+ ++ + F E+ +
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIV 120
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
+ YLH+ +++ DIK N++LD + K++DFGL K +D ++ GT
Sbjct: 121 SALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPE 175
Query: 358 YIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 391
Y+APE++ N +G D +G G+V+ EM GR
Sbjct: 176 YLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 35/293 (11%)
Query: 176 MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEE---FI 231
MP R E++ + +G G +G K + + G+++ K L+ + E +
Sbjct: 1 MPSRAEDYEVL-------YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV 53
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKL 289
+EV+ + + H N+V+ + + L V E+ G L I + Q E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 290 QEIALGTARGVAYLHNGCD--MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 347
+ + H D +LH D+KP N+ LD K+ DFGLA+ + F
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 348 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFP 407
A GT Y++PE ++R + + KSD++ G +L E+ A P
Sbjct: 174 --KAFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELC---------------ALMP 214
Query: 408 SWV-YDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLE 459
+ + Q G + I + +L I + +K RPS+ ++LE
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 216 AVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 275
AVK+++ SK E I + G+ H N++ L +G LV E M G L I
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL 113
Query: 276 PKENKGQTFGWEKLQEIALGT-ARGVAYLHNGCDMCILHFDIKPHNIL-LDHNFIP---K 330
Q F E+ L T + V YLH+ ++H D+KP NIL +D + P +
Sbjct: 114 -----RQKFFSEREASFVLHTIGKTVEYLHS---QGVVHRDLKPSNILYVDESGNPECLR 165
Query: 331 VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ DFG AK EN + T ++APE++ R C D++ G++L M G
Sbjct: 166 ICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGC--DIWSLGILLYTMLAG 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 128
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 129 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 186
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 187 RA---VDWWGLGVVMYEMMCGR 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 196 LGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS 253
+G G + SV K +H T AVK+++ SK E I + G+ H N++ L
Sbjct: 30 IGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYD 86
Query: 254 EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
+G +V E M G L I + + F + + + V YLH ++H
Sbjct: 87 DGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHA---QGVVH 139
Query: 314 FDIKPHNIL-LDHNFIP---KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
D+KP NIL +D + P ++ DFG AK EN + T ++APE++ R
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGY 197
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+C D++ G++L M G
Sbjct: 198 DAAC--DIWSLGVLLYTMLTG 216
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLEDNDYG 183
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 183 PEIIAVTNHFTHKLGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI- 240
P + + LG+G FG V + TGR A+K+L+ A++ + T R+
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 241 ---HHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
H + L + V E+ G L H+ ++ + F ++ +
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIV 120
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIG 357
+ YLH+ + +++ D+K N++LD + K++DFGL K K D ++ GT
Sbjct: 121 SALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPE 176
Query: 358 YIAPELISRN-FGTVSCKSDVYGFGMVLLEMAGGR 391
Y+APE++ N +G D +G G+V+ EM GR
Sbjct: 177 YLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGR 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
GLAK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 39/246 (15%)
Query: 186 IAVTNHFTHK-LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI--- 240
+ + + HK LG+G FG V+ + T + A+K L+ ++ + R+
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 241 --HHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGT 296
H + + FC+ +K L V E++ G L HI F + A
Sbjct: 74 AWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEI 127
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSISAT 352
G+ +LH+ I++ D+K NILLD + K++DFG+ K + K N F
Sbjct: 128 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC----- 179
Query: 353 RGTIGYIAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNAIRSSKA 404
GT YIAPE++ G S D + FG++L EM G+ ++IR
Sbjct: 180 -GTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 235
Query: 405 YFPSWV 410
++P W+
Sbjct: 236 FYPRWL 241
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L A++ + T R+ H + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F E+ + + YLH+
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEYLHS---RD 125
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ DIK N++LD + K++DFGL K +D ++ GT Y+APE++ N +G
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLEDNDYG 183
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 184 RA---VDWWGLGVVMYEMMCGR 202
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF--SAEEFINEVSTIGRIHHVNVVQLLGFC 252
LGQG +V++G+ TG L A+K+ N F + + E + +++H N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 253 SEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
E + R L+ EF P GSL + E +G + E + V +++ +
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVL---EEPSNAYGLPE-SEFLIVLRDVVGGMNHLRENG 132
Query: 311 ILHFDIKPHNILL----DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H +IKP NI+ D + K++DFG A+ + FVS+ GT Y+ P++ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY---GTEEYLHPDMYER 189
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 39/246 (15%)
Query: 186 IAVTNHFTHK-LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI--- 240
+ + + HK LG+G FG V+ + T + A+K L+ ++ + R+
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 241 --HHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGT 296
H + + FC+ +K L V E++ G L HI F + A
Sbjct: 75 AWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEI 128
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFH----PKENDFVSISAT 352
G+ +LH+ I++ D+K NILLD + K++DFG+ K + K N+F
Sbjct: 129 ILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC----- 180
Query: 353 RGTIGYIAPELISRNFGTVSCKS-DVYGFGMVLLEMAGGR-------RNSNMNAIRSSKA 404
GT YIAPE++ G S D + FG++L EM G+ ++IR
Sbjct: 181 -GTPDYIAPEIL---LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP 236
Query: 405 YFPSWV 410
++P W+
Sbjct: 237 FYPRWL 242
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ GW K +E + V+ + I
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLV-------AHGWMKEKEARAKFRQIVSAVQYCHQKFI 127
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELFQGK- 180
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 181 KYDGPEVDVWSLGVILYTLVSG 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L+ A++ + T R+ H + L
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 75
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F ++ + + YLH+ +
Sbjct: 76 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS--EKN 129
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 130 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYG 187
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 188 RA---VDWWGLGVVMYEMMCGR 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 35/293 (11%)
Query: 176 MPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSAEE---FI 231
MP R E++ + +G G +G K + + G+++ K L+ + E +
Sbjct: 1 MPSRAEDYEVL-------YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV 53
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKL 289
+EV+ + + H N+V+ + + L V E+ G L I + Q E +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 290 QEIALGTARGVAYLHNGCD--MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV 347
+ + H D +LH D+KP N+ LD K+ DFGLA+ + F
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 348 SISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFP 407
GT Y++PE ++R + + KSD++ G +L E+ A P
Sbjct: 174 KTFV--GTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELC---------------ALMP 214
Query: 408 SWV-YDQLNKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVLE 459
+ + Q G + I + +L I + +K RPS+ ++LE
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEE--FINEVSTIGR-IHHVNVVQLLG 250
+LG+G +G V K + + +G++ AVK + + S E+ + ++ R + V G
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ E + + SLD+ +KGQT + L +IA+ + + +LH+ +
Sbjct: 101 ALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS--KLS 157
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR--NF 368
++H D+KP N+L++ K DFG++ + D V+ G Y APE I+ N
Sbjct: 158 VIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVAKDIDAGCKPYXAPERINPELNQ 214
Query: 369 GTVSCKSDVYGFGMVLLEMA 388
S KSD++ G+ +E+A
Sbjct: 215 KGYSVKSDIWSLGITXIELA 234
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 196 LGQGGFGSV-YKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI----HHVNVVQLLG 250
LG+G FG V + TGR A+K+L+ A++ + T R+ H + L
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKY 76
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ V E+ G L H+ ++ + F ++ + + YLH+ +
Sbjct: 77 SFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYLHS--EKN 130
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN-FG 369
+++ D+K N++LD + K++DFGL K K D ++ GT Y+APE++ N +G
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK--DGATMKXFCGTPEYLAPEVLEDNDYG 188
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D +G G+V+ EM GR
Sbjct: 189 RA---VDWWGLGVVMYEMMCGR 207
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLG 250
K+G+G +G VYK + TG ++A+K + ++ I E+S + ++H N+V+LL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+K LV+E + D F + ++ +G+A+ H+
Sbjct: 73 VIHTENKLYLVFEHVDQ---DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HR 126
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFH--PKENDFVSISATRGTIGYIAPELISRNF 368
+LH D+KP N+L++ K++DFGLA+ P + T+ Y APE++
Sbjct: 127 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV----TLWYRAPEIL---- 178
Query: 369 GTVSCK-----SDVYGFGMVLLEMAGGR 391
+ CK D++ G + EM R
Sbjct: 179 --LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TGR +A+K+++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
L+ E+ G + ++ + K ++I V Y H I
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQKR---I 135
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELF-QGK 188
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSG 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+GGFG V+ Q+ TG+L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV M G + HI+ + F + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D + G+ L EM R
Sbjct: 368 FSV--DYFALGVTLYEMIAAR 386
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKM--LENSKFSAEEFINEVSTIGRIHHVNVVQLLGFC 252
LG+GGFG V++ + A+K L N + + E+ + EV + ++ H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 253 SEGSKRALVYEFMPNGSL--DRHIFPKEN-KGQTFGWEKLQE--------IALGTARGVA 301
E + + P L + KEN K G ++E I L A V
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 302 YLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSI----------SA 351
+LH+ ++H D+KP NI + + KV DFGL ++ + ++ +
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 352 TRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
GT Y++PE I N + S K D++ G++L E+
Sbjct: 190 QVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFEL 223
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+GGFG V+ Q+ TG+L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV M G + HI+ + F + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D + G+ L EM R
Sbjct: 368 FSV--DYFALGVTLYEMIAAR 386
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 200 GFGSVYKGQLH--TGRLIAVKMLE---NSKFSAEEF-------INEVSTIGRIH-HVNVV 246
G SV + +H T + AVK+++ FSAEE + EV + ++ H N++
Sbjct: 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
QL + LV++ M G L ++ K T ++ ++I + LH
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHK- 142
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI- 364
+ I+H D+KP NILLD + K++DFG + + P E + + GT Y+APE+I
Sbjct: 143 --LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LRSVCGTPSYLAPEIIE 196
Query: 365 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ N + D++ G+++ + G
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+GGFG V+ Q+ TG+L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV M G + HI+ + F + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D + G+ L EM R
Sbjct: 368 FSV--DYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSA----EEFINEVSTIGRIHHVNVVQLLG 250
LG+GGFG V+ Q+ TG+L A K L + + + E + ++H +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ LV M G + HI+ + F + G+ +LH
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RN 309
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
I++ D+KP N+LLD + ++SD GLA K GT G++APEL+
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQ-TKTKGYAGTPGFMAPELLLGEEYD 367
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
S D + G+ L EM R
Sbjct: 368 FSV--DYFALGVTLYEMIAAR 386
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 32/247 (12%)
Query: 196 LGQGGFGSVY-KGQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG G FG V + TG A+K+L+ K E +NE + ++ +V+L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ S +V E++P G + H+ + F + A YLH+ +
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---LD 147
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFG 369
+++ D+KP N+L+D +V+DFG AK K + GT Y+APE+I S+ +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAK-RVKGRTWTLC----GTPEYLAPEIILSKGYN 202
Query: 370 TVSCKSDVYGFGMVLLEMAGG-------RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLEL 422
D + G+++ EMA G + I S K FPS L DL L
Sbjct: 203 KA---VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-L 255
Query: 423 RNVTEIE 429
RN+ +++
Sbjct: 256 RNLLQVD 262
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 40/244 (16%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LGQG FG V K + R A+K + +++ ++EV + ++H VV+ E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 255 G----------SKRALVY---EFMPNGSLDRHIFPKE-NKGQTFGWEKLQEIALGTARGV 300
K++ ++ E+ N +L I + N+ + W ++I +
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EAL 129
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV------------S 348
+Y+H+ I+H ++KP NI +D + K+ DFGLAK + D + +
Sbjct: 130 SYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 349 ISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM-----AGGRRNSNMNAIRSSK 403
+++ GT Y+A E++ G + K D Y G++ E G R + + +RS
Sbjct: 187 LTSAIGTAXYVATEVLD-GTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVS 245
Query: 404 AYFP 407
FP
Sbjct: 246 IEFP 249
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TGR +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQ---KYI 135
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFS------NEFTVGNKLDTFCGSPPYAAPELF-QGK 188
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSG 210
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 20/197 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + +L TG A K++ K SA ++ E + H N+V+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
SE LV++ + G L I +E + +Q+I V + H M +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----LEAVLHCHQ---MGV 124
Query: 312 LHFDIKPHNILLD---HNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN- 367
+H D+KP N+LL K++DFGLA + D + GT GY++PE++ +
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKEA 182
Query: 368 FGTVSCKSDVYGFGMVL 384
+G D++ G++L
Sbjct: 183 YGK---PVDIWACGVIL 196
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F +G G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 192 FTHKLGQGGFGSVYKG---------QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHH 242
F LGQG F ++KG QLH ++ + + + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
++V G C G + LV EF+ GSLD ++ K+NK KL E+A A + +
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKL-EVAKQLAAAMHF 128
Query: 303 LHNGCDMCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISAT 352
L ++H ++ NILL + FI K+SD G++ PK+
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-------IL 177
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ I ++ PE I N ++ +D + FG L E+ G
Sbjct: 178 QERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 73 ILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
GLAK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GLAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK K + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAK-RVKGRTWTLC----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 200 GFGSVYKGQLH--TGRLIAVKMLE---NSKFSAEEF-------INEVSTIGRIH-HVNVV 246
G SV + +H T + AVK+++ FSAEE + EV + ++ H N++
Sbjct: 15 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 74
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
QL + LV++ M G L ++ K T ++ ++I + LH
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHK- 129
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI- 364
+ I+H D+KP NILLD + K++DFG + + P E + GT Y+APE+I
Sbjct: 130 --LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIE 183
Query: 365 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ N + D++ G+++ + G
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 250
+LG+G F V + ++ TG+ A K++ K SA ++ E + H N+V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCDM 309
SE LV++ + G L I +E + +Q+I V + H NG
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----LESVNHCHLNG--- 123
Query: 310 CILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP N+LL K++DFGLA + D + GT GY++PE++ +
Sbjct: 124 -IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 367 N-FGTVSCKSDVYGFGMVL 384
+ +G D++ G++L
Sbjct: 181 DPYGK---PVDMWACGVIL 196
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMAGFVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 200 GFGSVYKGQLH--TGRLIAVKMLE---NSKFSAEEF-------INEVSTIGRIH-HVNVV 246
G SV + +H T + AVK+++ FSAEE + EV + ++ H N++
Sbjct: 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87
Query: 247 QLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
QL + LV++ M G L ++ K T ++ ++I + LH
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALHK- 142
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI- 364
+ I+H D+KP NILLD + K++DFG + + P E + GT Y+APE+I
Sbjct: 143 --LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK----LREVCGTPSYLAPEIIE 196
Query: 365 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ N + D++ G+++ + G
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AVK+++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE-NSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 252
LG+G + V L G+ AVK++E + S EV T+ + + N+++L+ F
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
+ ++ LV+E + GS+ HI K + F + + A + +LH I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHI----QKQKHFNEREASRVVRDVAAALDFLHT---KGIA 133
Query: 313 HFDIKPHNILLD--HNFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 364
H D+KP NIL + P K+ DF L N I+ G+ Y+APE++
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 365 -----SRNFGTVSCKSDVYGFGMVLLEMAGG 390
F C D++ G+VL M G
Sbjct: 194 EVFTDQATFYDKRC--DLWSLGVVLYIMLSG 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 100 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 155
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 156 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 206
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AVK+++ ++ S ++ EV ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCHQ---KFI 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + A G Y APEL +
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS------NEFTFGNKLDAFCGAPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 38/215 (17%)
Query: 194 HKLGQGGFGSVYKGQ-LHTGRLIAVKML---ENSKFSAEEFINEVSTIGRIHHVNVVQLL 249
K+G+G +G+V+K + T ++A+K + ++ + + E+ + + H N+V+L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 250 GFCSEGSKRALVYEFMP----------NGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
K LV+EF NG LD I ++F ++ L+ + +R
Sbjct: 68 DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIV------KSFLFQLLKGLGFCHSRN 121
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYI 359
V LH D+KP N+L++ N K+++FGLA+ SA T+ Y
Sbjct: 122 V-----------LHRDLKPQNLLINRNGELKLANFGLARAFGIP--VRCYSAEVVTLWYR 168
Query: 360 APELISRNFGT--VSCKSDVYGFGMVLLEMAGGRR 392
P+++ FG S D++ G + E+A R
Sbjct: 169 PPDVL---FGAKLYSTSIDMWSAGCIFAELANAGR 200
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 192 FTHKLGQGGFGSVYKG---------QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHH 242
F LGQG F ++KG QLH ++ + + + +E F S + ++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
++V G C G + LV EF+ GSLD ++ K+NK KL E+A A + +
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKL-EVAKQLAWAMHF 128
Query: 303 LHNGCDMCILHFDIKPHNILL---------DHNFIPKVSDFGLA-KFHPKENDFVSISAT 352
L ++H ++ NILL + FI K+SD G++ PK+
Sbjct: 129 LEEN---TLIHGNVCAKNILLIREEDRKTGNPPFI-KLSDPGISITVLPKD-------IL 177
Query: 353 RGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ I ++ PE I N ++ +D + FG L E+ G
Sbjct: 178 QERIPWVPPECIE-NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 22/199 (11%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 250
+LG+G F V + ++ TG+ A K++ K SA ++ E + H N+V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCDM 309
SE LV++ + G L I +E + +Q+I V + H NG
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----LESVNHCHLNG--- 123
Query: 310 CILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP N+LL K++DFGLA + D + GT GY++PE++ +
Sbjct: 124 -IVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 367 N-FGTVSCKSDVYGFGMVL 384
+ +G D++ G++L
Sbjct: 181 DPYGK---PVDMWACGVIL 196
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TGR +A+K+++ ++ S ++ EV + ++H N+V+L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
L+ E+ G + ++ + K ++I V Y H I
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCHQ---KRI 132
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDTFCGSPPYAAPELF-QGK 185
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSG 207
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 86/175 (49%), Gaps = 17/175 (9%)
Query: 195 KLGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS 253
+LG+G VY+ Q T + A+K+L+ + + E+ + R+ H N+++L
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKT-VDKKIVRTEIGVLLRLSHPNIIKLKEIFE 118
Query: 254 EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH-NGCDMCIL 312
++ +LV E + G L I K + + +++I VAYLH NG I+
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----EAVAYLHENG----IV 170
Query: 313 HFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
H D+KP N+L + K++DFGL+K + V + GT GY APE++
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEIL 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 20/198 (10%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 250
+LG+G F V + ++ G+ A K++ K SA ++ E + H N+V+L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
SE L+++ + G L I +E + +Q+I V + H M
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL----EAVLHCHQ---MG 141
Query: 311 ILHFDIKPHNILLDHNF---IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+KP N+LL K++DFGLA E + + GT GY++PE++ ++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 368 -FGTVSCKSDVYGFGMVL 384
+G D++ G++L
Sbjct: 200 PYGK---PVDLWACGVIL 214
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM-LN 202
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGXVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AV++++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + F K ++F G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC------GSPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 176 MPKRYSYPEIIAVTNHFTHK--LGQGGFGSVYKG-QLHTGRLIAVKMLE--NSKFSAEEF 230
MPKR Y +++ F K LG+G +G V TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 231 INEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFG 285
+ E+ + H N++ + S + ++ E M L R I Q
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLS 110
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKF------ 339
+ +Q T R V LH ++H D+KP N+L++ N KV DFGLA+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 340 ---HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
P +++ V ATR Y APE++ + S DV+ G +L E+
Sbjct: 168 DNSEPTGQQSGMVEFVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 200 GFGSVYKGQLH--TGRLIAVKMLE-NSKFSAEEFINEVSTIGRIH---------HVNVVQ 247
G SV + +H TG AVK++E ++ + E + EV R H +++
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
L+ S LV++ M G L F + ++ + I V++LH
Sbjct: 165 LIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLA-KFHPKENDFVSISATRGTIGYIAPELISR 366
I+H D+KP NILLD N ++SDFG + P E + GT GY+APE++
Sbjct: 221 ---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----LRELCGTPGYLAPEILKC 273
Query: 367 NFGTV----SCKSDVYGFGMVLLEMAGG 390
+ + D++ G++L + G
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 87 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 193
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 87 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 142
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 143 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 193
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM-LN 216
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 25/206 (12%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV + +G IAVK L S A+ E+ + + H NV+ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 252 CSEGSKRA------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
+ + LV M L+ + K Q + +Q + RG+ Y+H+
Sbjct: 119 FTPATSLEEFNDVYLVTHLM-GADLNNIV-----KCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++
Sbjct: 173 AD---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM- 223
Query: 366 RNFGTVSCKSDVYGFGMVLLEMAGGR 391
N+ + D++ G ++ E+ GR
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 101 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 157 ---IIHRDLKPSNLAVNEDXELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 207
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKML----ENSKFSAEEFINEVSTIGRIH-HVNV 245
KLG+G +G V+K TG ++AVK + +NS A+ E+ + + H N+
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNST-DAQRTFREIMILTELSGHENI 71
Query: 246 VQLLGFCSEGSKRA--LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
V LL + R LV+++M D H + N + Q + + + YL
Sbjct: 72 VNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPV---HKQYVVYQLIKVIKYL 125
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK 338
H+G +LH D+KP NILL+ KV+DFGL++
Sbjct: 126 HSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 95 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 150
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 151 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 201
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 89 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 144
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 145 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 195
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 203
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 109 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM-LN 215
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 35/282 (12%)
Query: 164 NIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVKM 219
++++FL + K++ P + A + F LG G FG V TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 220 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 275
L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 276 PKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFG 335
+ F + A YLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 126 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 336 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG---- 390
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPF 231
Query: 391 ---RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 232 FADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 269
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +G+V TG +A+K L S+ A+ E+ + + H NV+ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 252 CSEGSKRALVYEF---MPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +F MP D K K + G +++Q + +G+ Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTD---LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG- 148
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
I+H D+KP N+ ++ + K+ DFGLA+ +++ TR Y APE+I N+
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVVTR---WYRAPEVIL-NW 200
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
+ D++ G ++ EM G+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVKMLENSKF---SAEEFINEVSTIGRIHHVNVVQLLGF 251
+G+G F V + + TG+ +AV++++ ++ S ++ EV + ++H N+V+L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
LV E+ G + ++ + K ++I V Y H I
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCHQKF---I 134
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFV---SISATRGTIGYIAPELISRNF 368
+H D+K N+LLD + K++DFG + N+F + G+ Y APEL +
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS------NEFTFGNKLDTFCGSPPYAAPELF-QGK 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
+ DV+ G++L + G
Sbjct: 188 KYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 96 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 151
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 152 ---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 202
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDSELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGXVATR---WYRAPE-IMLN 216
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 88 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 143
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 144 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 194
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 92 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 147
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 148 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 198
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 101 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 156
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 157 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 207
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 208
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 208
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 102 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 157
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 158 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM-LN 208
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 113 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 219
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 35/282 (12%)
Query: 164 NIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVKM 219
++++FL + K++ P + A + F LG G FG V TG A+K+
Sbjct: 7 DVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKI 66
Query: 220 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 275
L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 67 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL- 125
Query: 276 PKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFG 335
+ F + A YLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 126 ---RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFG 179
Query: 336 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG---- 390
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 180 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPF 231
Query: 391 ---RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 232 FADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 269
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E+ P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ + +L + S +V E+ P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE-IMLN 203
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 109 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 164
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 165 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPEIM-LN 215
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 110 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 165
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 166 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 216
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ + +L + S +V E+ P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMK 93
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++P G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL 153
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 258
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 259 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 297
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE I N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPE-IMLN 203
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 97 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 152
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ E ++ T Y APE++ N
Sbjct: 153 ---IIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWYRAPEIM-LN 203
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 113 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 168
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE++ N
Sbjct: 169 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMXGYVATR---WYRAPEIM-LN 219
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 39/215 (18%)
Query: 197 GQGGFGSVYKG-QLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGF--- 251
GQG FG+V G + TG +A+K ++++ +F E + + + +HH N+VQL +
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNIVQLQSYFYT 90
Query: 252 CSEGSKRAL----VYEFMPN-------GSLDRHIFPKENKGQTFGWEKLQEIALGTARGV 300
E +R + V E++P+ R + P + F ++ + R +
Sbjct: 91 LGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI--------RSI 142
Query: 301 AYLH-NGCDMCILHFDIKPHNILLDH-NFIPKVSDFGLA-KFHPKENDFVSISATRGTIG 357
LH ++C H DIKPHN+L++ + K+ DFG A K P E + I +
Sbjct: 143 GCLHLPSVNVC--HRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY---- 196
Query: 358 YIAPELISRNFGT--VSCKSDVYGFGMVLLEMAGG 390
Y APELI FG + D++ G + EM G
Sbjct: 197 YRAPELI---FGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ D+GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDYGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 196 LGQGGFGSV---YKGQLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G +GSV Y +L +AVK L S A E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ + E +L K Q E +Q + RG+ Y+H+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVY-DQLNK 416
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 240
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 102/245 (41%), Gaps = 27/245 (11%)
Query: 158 TLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQL----HTGR 213
L+ NI+ FL N+ + K+ ++ A +G+G FG V QL + +
Sbjct: 46 ALRKNKNIDNFL-NRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEV---QLVRHKASQK 101
Query: 214 LIAVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPN 267
+ A+K+L SKF + F E + + VVQL + +V E+MP
Sbjct: 102 VYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPG 159
Query: 268 GSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNF 327
G L + N W K TA V L M ++H D+KP N+LLD +
Sbjct: 160 GDL---VNLMSNYDVPEKWAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG 211
Query: 328 IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT--VSCKSDVYGFGMVLL 385
K++DFG E V GT YI+PE++ G + D + G+ L
Sbjct: 212 HLKLADFGTC-MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLF 270
Query: 386 EMAGG 390
EM G
Sbjct: 271 EMLVG 275
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ + +L + S +V E+ P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D KV+DF
Sbjct: 134 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGL + +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDSELKILDFGLCRH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIH-------H 242
H K+G G FGSV+K + G + A+K SK ++E + + ++ H
Sbjct: 10 HELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVYAHAVLGQH 66
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
+VV+ +E + E+ GSL I F +L+++ L RG+ Y
Sbjct: 67 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 126
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS----- 350
+H+ M ++H DIKP NI + IP + D+ K K D ++
Sbjct: 127 IHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 183
Query: 351 -ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
G ++A E++ N+ T K+D++ + ++ AG
Sbjct: 184 QVEEGDSRFLANEVLQENY-THLPKADIFALALTVVXAAGA 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNR 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 30/225 (13%)
Query: 196 LGQGGFGSVY---KGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGR--IHHVNVVQLL 249
LG G +G V+ K H TG+L A+K+L+ + + E + R + H+ L
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 250 -----GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
F +E +K L+ +++ G L H+ +E F ++Q + +LH
Sbjct: 122 VTLHYAFQTE-TKLHLILDYINGGELFTHLSQRER----FTEHEVQIYVGEIVLALEHLH 176
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATR-----GTIGYI 359
+ I++ DIK NILLD N ++DFGL+K +FV+ R GTI Y+
Sbjct: 177 K---LGIIYRDIKLENILLDSNGHVVLTDFGLSK------EFVADETERAYDFCGTIEYM 227
Query: 360 APELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKA 404
AP+++ D + G+++ E+ G ++ ++S+A
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQA 272
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ D++ G ++ E+ GR
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 196 LGQGGFGSV---YKGQLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G +GSV Y +L +AVK L S A E+ + + H NV+ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ + E +L K Q E +Q + RG+ Y+H+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 143
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 144 -IIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 196
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVY-DQLNK 416
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFP----KENKGQTFGWEKLQEIALGTARGVAYLHNG 306
RA E M + L H+ K K Q + + RG+ Y+H+
Sbjct: 109 II-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELIS 365
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++
Sbjct: 164 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 366 RNFGTVSCKSDVYGFGMVLLEMAGGR 391
+ G D++ G +L EM R
Sbjct: 221 NSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V TG A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE ++ +V+L + S +V E+ P G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D KV+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 205 YTK-SIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNR 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 176 MPKRYSYPEIIAVTNHFTHK--LGQGGFGSVYKG-QLHTGRLIAVKMLE--NSKFSAEEF 230
MPKR Y +++ F K LG+G +G V TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 231 INEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFG 285
+ E+ + H N++ + S + ++ E M L R I Q
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLS 110
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKF------ 339
+ +Q T R V LH ++H D+KP N+L++ N KV DFGLA+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 340 ---HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
P +++ ATR Y APE++ + S DV+ G +L E+
Sbjct: 168 DNSEPTGQQSGMTEXVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 196 LGQGGFGSVYKGQLH--TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCS 253
+G G + SV K +H T AVK+++ SK E I + G+ H N++ L
Sbjct: 30 IGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ--HPNIITLKDVYD 86
Query: 254 EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
+G +V E G L I + + F + + + V YLH ++H
Sbjct: 87 DGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTVEYLHA---QGVVH 139
Query: 314 FDIKPHNIL-LDHNFIP---KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
D+KP NIL +D + P ++ DFG AK EN + T ++APE++ R
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGY 197
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+C D++ G++L G
Sbjct: 198 DAAC--DIWSLGVLLYTXLTG 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 196 LGQGGFGS-VYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRI-HHVNVVQLLGFCS 253
LG G G+ VY+G + R +AVK + FS + EV + H NV++ FC+
Sbjct: 32 LGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFAD--REVQLLRESDEHPNVIRY--FCT 86
Query: 254 EGSKR-ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIAL--GTARGVAYLHNGCDMC 310
E ++ + + +L ++ K+ F L+ I L T G+A+LH+ +
Sbjct: 87 EKDRQFQYIAIELCAATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHS---LN 138
Query: 311 ILHFDIKPHNILLD----HNFIPK-VSDFGLA-KFHPKENDFVSISATRGTIGYIAPELI 364
I+H D+KPHNIL+ H I +SDFGL K + F S GT G+IAPE++
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEML 198
Query: 365 SRN 367
S +
Sbjct: 199 SED 201
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 176 MPKRYSYPEIIAVTNHFTHK--LGQGGFGSVYKG-QLHTGRLIAVKMLE--NSKFSAEEF 230
MPKR Y +++ F K LG+G +G V TG ++A+K +E + A
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 231 INEVSTIGRIHHVNVVQLLGFCSEGS-----KRALVYEFMPNGSLDRHIFPKENKGQTFG 285
+ E+ + H N++ + S + ++ E M L R I Q
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI-----STQMLS 110
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKF------ 339
+ +Q T R V LH ++H D+KP N+L++ N KV DFGLA+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 340 ---HP--KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
P +++ ATR Y APE++ + S DV+ G +L E+
Sbjct: 168 DNSEPTGQQSGMTEYVATR---WYRAPEVMLTS-AKYSRAMDVWSCGCILAEL 216
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 207 YTK-SIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 152
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 213 YTK-SIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 144
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 205 YTK-SIDIWSVGCILAEMLSNR 225
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K + +Q + RG+ Y+H+
Sbjct: 86 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSAD 141
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DFGLA+ +++ ATR Y APE I N
Sbjct: 142 ---IIHRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 30/229 (13%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFINEVSTIGRIH 241
++++ LG+G FG V + H GR +AVK+++N E +E+ + ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 242 HVN------VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ VQ+L + +V+E + + D F KEN F + ++++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHN-----FIPKVS---------DFGLAKFHP 341
+ V +LH+ + H D+KP NIL + + PK+ D + F
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 342 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
D S T Y APE+I + C DV+ G +L+E G
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLG 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 30/228 (13%)
Query: 196 LGQGGFGSV---YKGQLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLL 249
+G G +GSV Y +L +AVK L S A E+ + + H NV+ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ + E +L K Q E +Q + RG+ Y+H+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG-- 151
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP N+ ++ + ++ DFGLA+ + + ATR Y APE++ N+
Sbjct: 152 -IIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATR---WYRAPEIM-LNWM 204
Query: 370 TVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVY-DQLNK 416
+ D++ G ++ E+ G KA FP Y DQL +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG------------KALFPGSDYIDQLKR 240
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNR 229
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIH-------H 242
H K+G G FGSV+K + G + A+K SK ++E + + ++ H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
+VV+ +E + E+ GSL I F +L+++ L RG+ Y
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 128
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS----- 350
+H+ M ++H DIKP NI + IP + D+ K K D ++
Sbjct: 129 IHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 185
Query: 351 -ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
G ++A E++ N+ T K+D++ + ++ AG
Sbjct: 186 QVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V + TG A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 164
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 225 YTK-SIDIWSVGCILAEMLSNR 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 203 YTK-SIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 210 YTK-SIDIWSVGCILAEMLSNR 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 86
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 142
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 203 YTK-SIDIWSVGCILAEMLSNR 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 94
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 150
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 211 YTK-SIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 85
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 141
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 202 YTK-SIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKCQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIH-------H 242
H K+G G FGSV+K + G + A+K SK ++E + + ++ H
Sbjct: 12 HELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVYAHAVLGQH 68
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
+VV+ +E + E+ GSL I F +L+++ L RG+ Y
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 128
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS----- 350
+H+ M ++H DIKP NI + IP + D+ K K D ++
Sbjct: 129 IHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 185
Query: 351 -ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
G ++A E++ N+ T K+D++ + ++ AG
Sbjct: 186 QVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 225
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ DF LA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDFYLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 33/170 (19%)
Query: 228 EEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE 287
E+ E++ + ++ H NVV+L+ + PN +F N+G
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDD-----------PNEDHLYMVFELVNQGPVMEVP 129
Query: 288 KLQEIALGTAR--------GVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKF 339
L+ ++ AR G+ YLH I+H DIKP N+L+ + K++DFG++
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS-- 184
Query: 340 HPKENDFVS----ISATRGTIGYIAPELISRNFGTVSCKS-DVYGFGMVL 384
N+F +S T GT ++APE +S S K+ DV+ G+ L
Sbjct: 185 ----NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 191 HFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIH-------H 242
H K+G G FGSV+K + G + A+K SK ++E + + ++ H
Sbjct: 14 HELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVYAHAVLGQH 70
Query: 243 VNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY 302
+VV+ +E + E+ GSL I F +L+++ L RG+ Y
Sbjct: 71 SHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRY 130
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVS-------DFGLAKFHPKENDFVSIS----- 350
+H+ M ++H DIKP NI + IP + D+ K K D ++
Sbjct: 131 IHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP 187
Query: 351 -ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
G ++A E++ N+ T K+D++ + ++ AG
Sbjct: 188 QVEEGDSRFLANEVLQENY-THLPKADIFALALTVVCAAGA 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 196 LGQGGFGSVYKGQL----HTGRLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNV 245
+G+G FG V QL T ++ A+K+L SKF + F E + + V
Sbjct: 77 IGRGAFGEV---QLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWV 131
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
VQL + +V E+MP G L + N W + TA V L
Sbjct: 132 VQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALDA 183
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
M +H D+KP N+LLD + K++DFG KE V GT YI+PE++
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLK 242
Query: 366 RNFGT--VSCKSDVYGFGMVLLEMAGG 390
G + D + G+ L EM G
Sbjct: 243 SQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 92
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 148
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D + T Y APE++ + G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 209 YTK-SIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + R H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLRFRHENIIGIND 93
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 149
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D + T Y APE++ + G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 210 YTK-SIDIWSVGCILAEMLSNR 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 196 LGQGGFGSVYKGQL----HTGRLIAVKMLENSKF------SAEEFINEVSTIGRIHHVNV 245
+G+G FG V QL T ++ A+K+L SKF + F E + + V
Sbjct: 82 IGRGAFGEV---QLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWV 136
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
VQL + +V E+MP G L + N W + TA V L
Sbjct: 137 VQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALDA 188
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELIS 365
M +H D+KP N+LLD + K++DFG KE V GT YI+PE++
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLK 247
Query: 366 RNFGT--VSCKSDVYGFGMVLLEMAGG 390
G + D + G+ L EM G
Sbjct: 248 SQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLGF 251
+G+G +G V + + + V + + S F + + + E+ + R H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNK-VRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCI 311
+ + ++ ++ ++ K K Q + + RG+ Y+H+ +
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 149
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFGT 370
LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 209
Query: 371 VSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 210 TK-SIDIWSVGCILAEMLSNR 229
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 196 LGQGGFGSVYKGQLHTGRLI-AVKMLENSKF------SAEEFINEVSTIGRIHHVNVVQL 248
+G+G FG V + + R + A+K+L SKF + F E + + VVQL
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLL--SKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 249 LGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCD 308
+ +V E+MP G L + N W + TA V L
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFY-----TAEVVLALDAIHS 191
Query: 309 MCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNF 368
M +H D+KP N+LLD + K++DFG KE V GT YI+PE++
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQG 250
Query: 369 GT--VSCKSDVYGFGMVLLEMAGG 390
G + D + G+ L EM G
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 42/213 (19%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEE------FINEVSTIGRIHHVNVVQ 247
KLG+G +G VYK T +A+K + + EE I EVS + + H N+++
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHRNIIE 97
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAY-LHNG 306
L + L++E+ N L +++ +K ++++ + Y L NG
Sbjct: 98 LKSVIHHNHRLHLIFEYAEN-DLKKYM------------DKNPDVSMRVIKSFLYQLING 144
Query: 307 CDMC----ILHFDIKPHNILL---DHNFIP--KVSDFGLAK-FHPKENDFVSISATRGTI 356
+ C LH D+KP N+LL D + P K+ DFGLA+ F F T+
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII---TL 201
Query: 357 GYIAPELI--SRNFGTVSCKSDVYGFGMVLLEM 387
Y PE++ SR++ T D++ + EM
Sbjct: 202 WYRPPEILLGSRHYST---SVDIWSIACIWAEM 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 196 LGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G G FG + + L+AVK +E + E E+ + H N+V+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+ A+V E+ G L I N G+ F ++ + GV+Y H M + H
Sbjct: 86 PTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYCHA---MQVCHR 138
Query: 315 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 368
D+K N LLD + P K+ DFG +K H + +T GT YIAPE L+ + +
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLLKKEY 192
Query: 369 -GTVSCKSDVYGFGMVLLEMAGG 390
G V +DV+ G+ L M G
Sbjct: 193 DGKV---ADVWSCGVTLYVMLVG 212
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 196 LGQGGFGSVYKGQ-LHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIH-HVNVVQLLGFC 252
L +GGF VY+ Q + +GR A+K +L N + I EV + ++ H N+VQ
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 253 SEGSKRA-------LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
S G + + L+ + G L + E++G + + +I T R V ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSCDTVLKIFYQTCRAVQHMHR 154
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLA---------KFHPKENDFVSISATRGTI 356
I+H D+K N+LL + K+ DFG A + + V TR T
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 357 G-YIAPELIS--RNFGTVSCKSDVYGFGMVL 384
Y PE+I NF + K D++ G +L
Sbjct: 214 PMYRTPEIIDLYSNF-PIGEKQDIWALGCIL 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
F + +V E SL R E + + F + +Q GV YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ--------GVQYLHNN 161
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVT 426
S + D++ G +L + G+ + ++ + Y ++ K R++
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIKKNEYSVPRHIN 266
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKVL 458
+ S + R++ + RPS+ ++L
Sbjct: 267 PVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLI-AVKMLENS----KFSAEEFINEVSTIGR-IHHVN 244
HF +G+G FG V + + AVK+L+ K + ++E + + + + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+V L K V +++ G L H+ + + F + + A A + YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLEPRARFYAAEIASALGYLH 156
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI 364
+ + I++ D+KP NILLD ++DFGL K + + N + S GT Y+APE++
Sbjct: 157 S---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS--TTSTFCGTPEYLAPEVL 211
Query: 365 SRNFGTVSCKSDVYGFGMVLLEMAGG 390
+ D + G VL EM G
Sbjct: 212 HKQ--PYDRTVDWWCLGAVLYEMLYG 235
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDAGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ FGLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILGFGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 196 LGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G G FG + + L+AVK +E + A E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+ A+V E+ G L I N G+ F ++ + GV+Y H M + H
Sbjct: 87 PTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 315 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 368
D+K N LLD + P K+ DFG +K H + +T GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK------STVGTPAYIAPEVLLKKEY 193
Query: 369 -GTVSCKSDVYGFGMVLLEMAGG 390
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVS 235
PK+Y+ + ++ LG G G V + TG+ A+K+L +S + +E +
Sbjct: 2 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ 58
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIA 293
G H V ++ + G KR L + E M G L I +E Q F + EI
Sbjct: 59 ASGGPHIVCILDVYENMHHG-KRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIM 115
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSIS 350
+ +LH+ I H D+KP N+L + + + K++DFG A KE ++
Sbjct: 116 RDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQ 168
Query: 351 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
T Y+APE++ SC D++ G+++
Sbjct: 169 TPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIM 200
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDRGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVL 384
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVL 384
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A+K++ KF+ A+ +N
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 64 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 123 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 173
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVL 384
++ GT Y+APE L+S + D + G++L
Sbjct: 174 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
F + +V E SL R E + + F + +Q GV YLHN
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ--------GVQYLHNN 145
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 146 R---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVT 426
S + D++ G +L + G+ + ++ + Y ++ K R++
Sbjct: 201 K--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIKKNEYSVPRHIN 250
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKVL 458
+ S + R++ + RPS+ ++L
Sbjct: 251 PVASALIRRM-------LHADPTLRPSVAELL 275
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVS 235
PK+Y+ + ++ LG G G V + TG+ A+K+L +S + +E +
Sbjct: 21 PKKYAVTDDYQLSKQV---LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQ 77
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRAL--VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIA 293
G H V ++ + G KR L + E M G L I +E Q F + EI
Sbjct: 78 ASGGPHIVCILDVYENMHHG-KRCLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIM 134
Query: 294 LGTARGVAYLHNGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDFVSIS 350
+ +LH+ I H D+KP N+L + + + K++DFG A KE ++
Sbjct: 135 RDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA----KETTQNALQ 187
Query: 351 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
T Y+APE++ SC D++ G+++
Sbjct: 188 TPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIM 219
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
F + +V E SL R E + + F + +Q GV YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ--------GVQYLHNN 161
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVT 426
S + D++ G +L + G+ + ++ + Y ++ K R++
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIKKNEYSVPRHIN 266
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKVL 458
+ S + R++ + RPS+ ++L
Sbjct: 267 PVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A+K++ KF+ A+ +N
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 62
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 63 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 122 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 172
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVL 384
++ GT Y+APE L+S + D + G++L
Sbjct: 173 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 195 KLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVSTIGR----IHHVNVVQLL 249
+LG G +G V+K + GRL AVK + ++ +++ +G H V+L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
EG L E SL +H E G + ++ T +A+LH+
Sbjct: 124 QAWEEGGILYLQTELC-GPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAHLHS---Q 176
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
++H D+KP NI L K+ DFGL + + G Y+APEL+ ++G
Sbjct: 177 GLVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDPRYMAPELLQGSYG 233
Query: 370 TVSCKSDVYGFGMVLLEMA 388
T +DV+ G+ +LE+A
Sbjct: 234 TA---ADVFSLGLTILEVA 249
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 247
+F KL + G ++KG+ G I VK+L+ +S + +F E + H NV+
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 248 LLGFCSE--GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEI--ALGTARGVAYL 303
+LG C L+ +MP GSL + ++G F ++ Q + AL ARG+A+L
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVL----HEGTNFVVDQSQAVKFALDMARGMAFL 127
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
H + I + ++++D + ++S KF F S ++APE
Sbjct: 128 HT-LEPLIPRHALNSRSVMIDEDMTARIS-MADVKF-----SFQSPGRMYAP-AWVAPEA 179
Query: 364 ISRNFGTVSCKS-DVYGFGMVLLEM 387
+ + + +S D++ F ++L E+
Sbjct: 180 LQKKPEDTNRRSADMWSFAVLLWEL 204
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK ++ GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLA-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 196 LGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G G FG + L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+ A+V E+ G L I N G+ F ++ + GV+Y H M + H
Sbjct: 87 PTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYAHA---MQVAHR 139
Query: 315 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 368
D+K N LLD + P K++DFG +K H + V GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV------GTPAYIAPEVLLKKEY 193
Query: 369 -GTVSCKSDVYGFGMVLLEMAGG 390
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLE---NSKFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +GSV TG +AVK L S A+ E+ + + H NV+ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 252 CSEGSKRALVYEFMPNGSLDRHIFPKE----NKGQTFGWEKLQEIALGTARGVAYLHNGC 307
+ R+L E + L H+ + K Q + +Q + RG+ Y+H+
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD 145
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
I+H D+KP N+ ++ + K+ D GLA+ +++ ATR Y APE I N
Sbjct: 146 ---IIHRDLKPSNLAVNEDCELKILDGGLARH--TDDEMTGYVATR---WYRAPE-IMLN 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
+ + D++ G ++ E+ GR
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A+K++ KF+ A+ +N
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 70 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 129 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 179
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVL 384
++ GT Y+APE L+S + D + G++L
Sbjct: 180 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 39/272 (14%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF Y+ + T + A K++ S E+ E++ + + +VV G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 251 FCSEGSKRALVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNG 306
F + +V E SL R E + + F + +Q GV YLHN
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQ--------GVQYLHNN 161
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR 366
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++ +
Sbjct: 162 R---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 367 NFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVT 426
S + D++ G +L + G+ + ++ + Y ++ K R++
Sbjct: 217 K--GHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------YIRIKKNEYSVPRHIN 266
Query: 427 EIESVIARKLCMIGLWCIQVKAADRPSMTKVL 458
+ S + R++ + RPS+ ++L
Sbjct: 267 PVASALIRRM-------LHADPTLRPSVAELL 291
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 20/198 (10%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSA---EEFINEVSTIGRIHHVNVVQLLG 250
+LG+G F V + ++ G+ A ++ K SA ++ E + H N+V+L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
SE L+++ + G L I +E + +Q+I V + H M
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL----EAVLHCHQ---MG 130
Query: 311 ILHFDIKPHNILLDHNF---IPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H ++KP N+LL K++DFGLA E + + GT GY++PE++ ++
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 368 -FGTVSCKSDVYGFGMVL 384
+G D++ G++L
Sbjct: 189 PYGK---PVDLWACGVIL 203
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFIN----EVSTIGRIHHVNV 245
+F LG+G FG V T L A+K+L+ ++ + E + +
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 246 VQLLGFCSEGSKRA-LVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEI--ALGTARGVAY 302
+ L C + R V E++ G L HI Q +++ Q + A + G+ +
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHI------QQVGKFKEPQAVFYAAEISIGLFF 135
Query: 303 LHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
LH I++ D+K N++LD K++DFG+ K H D V+ GT YIAPE
Sbjct: 136 LHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH--MMDGVTTREFCGTPDYIAPE 190
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
+I+ + D + +G++L EM G+
Sbjct: 191 IIA--YQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 196 LGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G G FG + + L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+ A+V E+ G L I N G+ F ++ + GV+Y H M + H
Sbjct: 87 PTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 315 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 368
D+K N LLD + P K+ FG +K H + D V GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV------GTPAYIAPEVLLKKEY 193
Query: 369 -GTVSCKSDVYGFGMVLLEMAGG 390
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSV-YKGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 14 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 73
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 74 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 133
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 134 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 186
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 187 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 238
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 239 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 277
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRT-----WXLXGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A++++ KF+ A+ +N
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 203 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 262 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 312
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG 390
++ GT Y+APE L+S + D + G++L G
Sbjct: 313 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 8 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 67
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 68 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 127
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 128 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 180
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 181 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 232
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 233 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 271
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 200 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 257 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 286
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK 280
LLG C++ G ++ EF G+L ++ K N+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 122
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 202 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 259 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 288
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK 280
LLG C++ G ++ EF G+L ++ K N+
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 124
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 207 YTK-SIDIWSVGCILAEMLSNR 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NIL+ KV DFG+A+ N +A GT Y++PE +
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGD-- 194
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 30/229 (13%)
Query: 184 EIIAVTNHFTHKLGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFINEVSTIGRIH 241
++++ LG+G FG V + H GR +AVK+++N E +E+ + ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 242 HVN------VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ VQ+L + +V+E + + D F KEN F + ++++A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHN-----FIPKVS---------DFGLAKFHP 341
+ V +LH+ + H D+KP NIL + + PK+ D + F
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 342 KENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
D S Y APE+I + C DV+ G +L+E G
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPC--DVWSIGCILIEYYLG 230
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 207 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 264 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 293
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK 280
LLG C++ G ++ EF G+L ++ K N+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 121/282 (42%), Gaps = 35/282 (12%)
Query: 164 NIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSV-YKGQLHTGRLIAVKM 219
++++FL + K++ P + A + F LG G FG V +G A+K+
Sbjct: 1 SVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKI 60
Query: 220 LENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIF 275
L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 61 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL- 119
Query: 276 PKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFG 335
+ F + A YLH+ + +++ D+KP N+L+D +V+DFG
Sbjct: 120 ---RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFG 173
Query: 336 LAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG---- 390
AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 174 FAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPPF 225
Query: 391 ---RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 226 FADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 263
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 296 TARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGT 355
A+G+ +L CI H D+ NILL + K+ DFGLA+ K+ D+V R
Sbjct: 209 VAKGMEFL--ASRKCI-HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ ++APE I T+ +SDV+ FG++L E+
Sbjct: 266 LKWMAPETIFDRVYTI--QSDVWSFGVLLWEI 295
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 196 LGQGGFGSVYKG------QLHTGRLIAVKMLENSKFSAEE--FINEVSTIGRI-HHVNVV 246
LG+G FG V + + T R +AVKML+ +E ++E+ + I HH+NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 247 QLLGFCSE-GSKRALVYEFMPNGSLDRHIFPKENK 280
LLG C++ G ++ EF G+L ++ K N+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 182 YPEIIAVTNHFTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFS------AEEFIN-- 232
YP+ + + LG G G V + T + +A++++ KF+ A+ +N
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 233 -EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEKLQ 290
E+ + +++H ++++ F + +V E M G L D+ + K K T Q
Sbjct: 189 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 291 EIALGTARGVAYLH-NGCDMCILHFDIKPHNILL---DHNFIPKVSDFGLAKFHPKENDF 346
+ V YLH NG I+H D+KP N+LL + + + K++DFG +K + +
Sbjct: 248 MLL-----AVQYLHENG----IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM 298
Query: 347 VSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLL 385
++ GT Y+APE L+S + D + G++L
Sbjct: 299 RTLC---GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 24/237 (10%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKG-----ATWTLCGTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 258
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 259 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSV-YKGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NI++ KV DFG+A+ N +A GT Y++PE +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NI++ KV DFG+A+ N +A GT Y++PE +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NI++ KV DFG+A+ N +A GT Y++PE +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 249
+G+G + V +L T R+ A+K+++ + +E I+ V T + +H +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
S+ V E++ G L H+ + + EI+L + YLH +
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 125
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 126 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 183
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
G D + G+++ EM GR
Sbjct: 184 G---FSVDWWALGVLMFEMMAGR 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NI++ KV DFG+A+ N +A GT Y++PE +
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 211
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 212 SVDARSDVYSLGCVLYEVLTG 232
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KP NI++ KV DFG+A+ N +A GT Y++PE +
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD-- 194
Query: 370 TVSCKSDVYGFGMVLLEMAGG 390
+V +SDVY G VL E+ G
Sbjct: 195 SVDARSDVYSLGCVLYEVLTG 215
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 34 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 93
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 94 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 153
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 154 ----RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 206
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ EMA G
Sbjct: 207 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 258
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 259 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 297
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 249
+G+G + V +L T R+ A+K+++ + +E I+ V T + +H +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
S+ V E++ G L H+ + + EI+L + YLH +
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 140
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 141 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 198
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
G D + G+++ EM GR
Sbjct: 199 G---FSVDWWALGVLMFEMMAGR 218
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEF----INEVSTIGRIHHVNVVQLLG 250
+G+G +G V + ++ +A+K + S F + + + E+ + H N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKI--SPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + ++ ++ ++ K K Q + + RG+ Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLY-KLLKTQHLSNDHICYFLYQILRGLKYIHSAN--- 146
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVS-ISATRGTIGYIAPELISRNFG 369
+LH D+KP N+LL+ K+ DFGLA+ ++D ++ T Y APE++ + G
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 370 TVSCKSDVYGFGMVLLEMAGGR 391
D++ G +L EM R
Sbjct: 207 YTKS-IDIWSVGCILAEMLSNR 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 50/241 (20%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLI-AVKMLENSKF------SAEEFINEVSTIGRIHHV 243
H +GQG +G V + R I A+K++ +K E EV + ++HH
Sbjct: 29 HLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 244 NVVQLLGFCSEGSKRALVYEFMPNGSL-DR-HIFPKENKG-------------------- 281
N+ +L + LV E G L D+ ++F ++ G
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 282 ----------QTFGWEKLQEIALGTAR----GVAYLHNGCDMCILHFDIKPHNILLDHN- 326
++ + + +++ R + YLHN I H DIKP N L N
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNK 205
Query: 327 -FIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMV 383
F K+ DFGL+K K N ++ ++ GT ++APE+++ + K D + G++
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265
Query: 384 L 384
L
Sbjct: 266 L 266
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVS 235
P Y Y E + H +LG+G FG V++ + TG AVK + F AEE +
Sbjct: 64 PVDYEYREEVHWATHQL-RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM---- 118
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +V L G EG + E + GSL + + K Q E LG
Sbjct: 119 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLG 173
Query: 296 TA-RGVAYLHNGCDMCILHFDIKPHNILLDHNFI-PKVSDFGLAK-FHPK--ENDFVSIS 350
A G+ YLH+ ILH D+K N+LL + + DFG A P D ++
Sbjct: 174 QALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 351 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT ++APE++ + K DV+ ++L M G
Sbjct: 231 YIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 249
+G+G + V +L T R+ A+K+++ + +E I+ V T + +H +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
S+ V E++ G L H+ + + EI+L + YLH +
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 129
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 130 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSXFCGTPNYIAPEILRGEDY 187
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
G D + G+++ EM GR
Sbjct: 188 G---FSVDWWALGVLMFEMMAGR 207
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+++D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE +IS+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIIISKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 195 KLGQGGFGSVYKGQLH-TGRLIAVKMLENS--KFSAEEFINEVSTIGRIHHVN-VVQLLG 250
++G G G V+K + TG +IAVK + S K + + ++ + + H +VQ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 251 FCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ + E M G+ + K+ L ++ + + + YL
Sbjct: 92 TFITNTDVFIAMELM--GTCAEKL--KKRMQGPIPERILGKMTVAIVKALYYLKE--KHG 145
Query: 311 ILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
++H D+KP NILLD K+ DFG++ + D + + G Y+APE I T
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 371 ---VSCKSDVYGFGMVLLEMAGGR 391
++DV+ G+ L+E+A G+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQ 226
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+APE+I S+ + D + G+++ +MA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPEIILSKGYNKA---VDWWALGVLIYQMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRI-----HHVNVVQLL 249
+G+G + V +L T R+ A+++++ + +E I+ V T + +H +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
S+ V E++ G L H+ + + EI+L + YLH +
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYLH---ER 172
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNF 368
I++ D+K N+LLD K++D+G+ K + D + S GT YIAPE++ ++
Sbjct: 173 GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTSTFCGTPNYIAPEILRGEDY 230
Query: 369 GTVSCKSDVYGFGMVLLEMAGGR 391
G D + G+++ EM GR
Sbjct: 231 G---FSVDWWALGVLMFEMMAGR 250
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 50/244 (20%)
Query: 174 SWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFI 231
W+ +RY EI++ LG+G FG V + H G +A+K+++N + E
Sbjct: 29 DWLQERY---EIVST-------LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAAR 78
Query: 232 NEVSTIGRIHHVN------VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFG 285
E++ + +I+ + VQ+ + + +E + + D F K+N +
Sbjct: 79 LEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFD---FLKDNNYLPYP 135
Query: 286 WEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNIL-------LDHNFIPK-------- 330
+++ +A + V +LH D + H D+KP NIL L +N K
Sbjct: 136 IHQVRHMAFQLCQAVKFLH---DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKS 192
Query: 331 ----VSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 386
V DFG A F D S T Y APE+I + C DV+ G ++ E
Sbjct: 193 TAVRVVDFGSATF-----DHEHHSTIVSTRHYRAPEVILELGWSQPC--DVWSIGCIIFE 245
Query: 387 MAGG 390
G
Sbjct: 246 YYVG 249
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 196 LGQGGFG-SVYKGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
+G G FG + + L+AVK +E + E E+ + H N+V+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 255 GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHF 314
+ A+V E+ G L I N G+ F ++ + GV+Y H M + H
Sbjct: 87 PTHLAIVMEYASGGELFERIC---NAGR-FSEDEARFFFQQLISGVSYCHA---MQVCHR 139
Query: 315 DIKPHNILLDHNFIP--KVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE-LISRNF 368
D+K N LLD + P K+ FG +K H + +T GT YIAPE L+ + +
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK------STVGTPAYIAPEVLLKKEY 193
Query: 369 -GTVSCKSDVYGFGMVLLEMAGG 390
G V +DV+ G+ L M G
Sbjct: 194 DGKV---ADVWSCGVTLYVMLVG 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 182 YPEIIAVTNHFT------HKLGQGGFGSVYKGQLHT-GRLIAVKMLENSKFSA---EEFI 231
Y + +A FT +LG+G F V + T + A K++ K SA ++
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 232 NEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQE 291
E + H N+V+L SE LV++ + G L I +E + + +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ 138
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLD---HNFIPKVSDFGLA-KFHPKENDFV 347
I V ++H I+H D+KP N+LL K++DFGLA + ++ +
Sbjct: 139 I----LESVNHIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWF 191
Query: 348 SISATRGTIGYIAPELISRN-FGTVSCKSDVYGFGMVL 384
+ GT GY++PE++ ++ +G D++ G++L
Sbjct: 192 GFA---GTPGYLSPEVLRKDPYGK---PVDIWACGVIL 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT Y+AP +I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEYLAPAIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 85
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 86 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 140
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 197
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 198 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 251
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 252 EEVKMLIRNLLKTE 265
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 31 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 90
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 91 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 145
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 202
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 203 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 256
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 257 EEVKMLIRNLLKTE 270
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 25 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 84
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 85 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 139
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 196
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 197 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 250
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 251 EEVKMLIRNLLKTE 264
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 30 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 89
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 90 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 144
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 201
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 202 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 255
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 256 EEVKMLIRNLLKTE 269
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 83
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 84 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 138
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 195
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 196 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 249
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 250 EEVKMLIRNLLKTE 263
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 32 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 91
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 92 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 146
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 203
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 204 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 257
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 258 EEVKMLIRNLLKTE 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 193 THKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAE---EFINEVSTIGRIHHV-NVVQ 247
+ +LG+G F V + TG+ A K L+ + + E ++E++ + V+
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 248 LLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGC 307
L S+ L+ E+ G + P+ + + + GV YLH
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNN 151
Query: 308 DMCILHFDIKPHNILLDHNFIP----KVSDFGLAKFHPKENDFVSISATRGTIGYIAPEL 363
I+H D+KP NILL + P K+ DFG+++ K + GT Y+APE+
Sbjct: 152 ---IVHLDLKPQNILLS-SIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEI 204
Query: 364 ISRNFGTVSCKSDVYGFGMV 383
+ N+ ++ +D++ G++
Sbjct: 205 L--NYDPITTATDMWNIGII 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 135
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 136 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 190
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 191 --GHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 24 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 83
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 84 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 138
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKYD 195
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 196 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 249
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 250 EEVKMLIRNLLKTE 263
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 244
+F LG+G FG V + T L AVK+L+ ++ + R+ +
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ QL + V E++ G L HI + EIA+G + +L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQ 138
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPE 362
+ I++ D+K N++LD K++DFG+ KEN D V+ GT YIAPE
Sbjct: 139 S---KGIIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPE 191
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
+I+ + D + FG++L EM G+
Sbjct: 192 IIA--YQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENS---KFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +G V + TG+ +A+K + N+ +A+ + E+ + H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 252 C------SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
E +V + M L + I + Q E ++ RG+ Y+H+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE 362
++H D+KP N+L++ N K+ DFG+A+ P E+ + ++ T Y APE
Sbjct: 177 AQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVATRWYRAPE 232
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGGRR 392
L+ + + D++ G + EM R+
Sbjct: 233 LML-SLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 137
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 193 --GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 85
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 86 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 140
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 197
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 198 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 251
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 252 EEVKMLIRNLLKTE 265
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIH-HVNVVQLLGFC 252
LG+G V L T + AVK++E + EV + + H NV++L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
E + LV+E M GS+ HI +K + F + + A + +LHN I
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHN---KGIA 133
Query: 313 HFDIKPHNILLDH--NFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 364
H D+KP NIL +H P K+ DFGL D IS G+ Y+APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 365 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 390
S + D++ G++L + G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 76 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 135
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 136 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 190
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 247
Query: 371 VSCKSDVYGFGMVL---------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLN 415
SC D++ G+++ L ++ G + IR + FP+ + +++
Sbjct: 248 KSC--DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVS 301
Query: 416 KGGDLELRNVTEIE 429
+ + +RN+ + E
Sbjct: 302 EEVKMLIRNLLKTE 315
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G V + T A+KML++ + E H V +V +
Sbjct: 70 LGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYA 129
Query: 255 GSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILH 313
G K L V E + G L I ++ Q F + EI + YLH+ + I H
Sbjct: 130 GRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAH 184
Query: 314 FDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGT 370
D+KP N+L N I K++DFG AK N S++ T Y+APE++
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYD 241
Query: 371 VSCKSDVYGFGMVL 384
SC D++ G+++
Sbjct: 242 KSC--DMWSLGVIM 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 196 LGQGGFGSVYKGQLH-TGRLIAVKMLENS---KFSAEEFINEVSTIGRIHHVNVVQLLGF 251
+G G +G V + TG+ +A+K + N+ +A+ + E+ + H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 252 C------SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHN 305
E +V + M L + I + Q E ++ RG+ Y+H+
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 306 GCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK---FHPKENDFVSISATRGTIGYIAPE 362
++H D+KP N+L++ N K+ DFG+A+ P E+ + ++ T Y APE
Sbjct: 178 AQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYF-MTEYVATRWYRAPE 233
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGGRR 392
L+ + + D++ G + EM R+
Sbjct: 234 LML-SLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 159
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 160 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 214
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 215 --GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 137
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 138 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 192
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 193 --GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 211 TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRAL-VYEFMPNGS 269
T A+KML++ + E H V +V + G K L V E + G
Sbjct: 56 TQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGE 115
Query: 270 LDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDH---N 326
L I ++ Q F + EI + YLH+ + I H D+KP N+L N
Sbjct: 116 LFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 170
Query: 327 FIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL-- 384
I K++DFG AK N S++ T Y+APE++ SC D++ G+++
Sbjct: 171 AILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSC--DMWSLGVIMYI 225
Query: 385 -------------LEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
L ++ G + IR + FP+ + ++++ + +RN+ + E
Sbjct: 226 LLCGYPPFYSNHGLAISPGMKTR----IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 279
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 163 DNIEKFLHNQQSWMPKRYSYP-EIIAVTNHFTH--KLGQGGFGSVY-KGQLHTGRLIAVK 218
+++++FL + K++ P + A + F LG G FG V +G A+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 219 MLENSKF----SAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
+L+ K E +NE + ++ +V+L + S +V E++ G + H+
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL 132
Query: 275 FPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
+ F + A YLH+ + +++ D+KP N+L+D +V+DF
Sbjct: 133 ----RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSCKSDVYGFGMVLLEMAGG--- 390
G AK + GT +APE+I S+ + D + G+++ EMA G
Sbjct: 186 GFAKRVKGRTWXLC-----GTPEALAPEIILSKGYNKA---VDWWALGVLIYEMAAGYPP 237
Query: 391 ----RRNSNMNAIRSSKAYFPSWVYDQLNKGGDLELRNVTEIE 429
+ I S K FPS L DL LRN+ +++
Sbjct: 238 FFADQPIQIYEKIVSGKVRFPSHFSSDLK---DL-LRNLLQVD 276
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 141
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 142 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKK 196
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 197 GH--SFEVDVWSIGCIMYTLLVGK 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 196 LGQGGFGSVYK-GQLHTGRLIAVKMLENSKF----SAEEFINEVSTIGRIHHVNVVQLLG 250
LG+GGF ++ T + A K++ S E+ E+S + H +VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 251 FCSEGSKRALVYEFMPNGSL-DRHIFPKENKGQTFGWEK--LQEIALGTARGVAYLHNGC 307
F + +V E SL + H K K T + L++I LG YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELH---KRRKALTEPEARYYLRQIVLG----CQYLHRNR 161
Query: 308 DMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
++H D+K N+ L+ + K+ DFGLA E D GT YIAPE++S+
Sbjct: 162 ---VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKVLCGTPNYIAPEVLSKK 216
Query: 368 FGTVSCKSDVYGFGMVLLEMAGGR 391
S + DV+ G ++ + G+
Sbjct: 217 --GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 37/213 (17%)
Query: 177 PKRYSYPEIIAVTNHFTHK------LGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEE 229
PK + A ++ K LG G FG V+ + + VK ++ K +
Sbjct: 7 PKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDC 66
Query: 230 FIN---------EVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGS-----LDRHIF 275
+I E++ + R+ H N++++L LV E +G +DRH
Sbjct: 67 WIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH-- 124
Query: 276 PKENKG-QTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDF 334
P+ ++ ++ + +L +A G L + I+H DIK NI++ +F K+ DF
Sbjct: 125 PRLDEPLASYIFRQLV-----SAVGYLRLKD-----IIHRDIKDENIVIAEDFTIKLIDF 174
Query: 335 GLAKFHPKENDFVSISATRGTIGYIAPELISRN 367
G A + + F + GTI Y APE++ N
Sbjct: 175 GSAAYLERGKLFYTFC---GTIEYCAPEVLMGN 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 191 HFTHKLGQGGFGSVYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 244
+F LG+G FG V + T L AVK+L+ ++ + R+ +
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 245 VVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLH 304
+ QL + V E++ G L HI + EIA+G + +L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIG----LFFLQ 459
Query: 305 NGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEN--DFVSISATRGTIGYIAPE 362
+ I++ D+K N++LD K++DFG+ KEN D V+ GT YIAPE
Sbjct: 460 S---KGIIYRDLKLDNVMLDSEGHIKIADFGMC----KENIWDGVTTKXFCGTPDYIAPE 512
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
+I+ + D + FG++L EM G+
Sbjct: 513 IIA--YQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 21/220 (9%)
Query: 177 PKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVS 235
P Y Y E + H +LG+G FG V++ + TG AVK + F AEE +
Sbjct: 83 PVDYEYREEVHWATHQL-RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELM---- 137
Query: 236 TIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALG 295
+ +V L G EG + E + GSL + + K Q E LG
Sbjct: 138 ACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV-----KEQGCLPEDRALYYLG 192
Query: 296 TA-RGVAYLHNGCDMCILHFDIKPHNILLDHNFI-PKVSDFGLAK-FHPK--ENDFVSIS 350
A G+ YLH+ ILH D+K N+LL + + DFG A P ++
Sbjct: 193 QALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 351 ATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGG 390
GT ++APE++ + K DV+ ++L M G
Sbjct: 250 YIPGTETHMAPEVVLGR--SCDAKVDVWSSCCMMLHMLNG 287
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 191 HFTHKLGQGGFGSVYKGQLHTGRLIAVKMLENSKFS---AEEFINEVSTIGRIHHVNVVQ 247
+F KL + G ++KG+ G I VK+L+ +S + +F E + H NV+
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 248 LLGFCSE--GSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEI--ALGTARGVAYL 303
+LG C L+ + P GSL + ++G F ++ Q + AL ARG A+L
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSLYNVL----HEGTNFVVDQSQAVKFALDXARGXAFL 127
Query: 304 HNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG-TIGYIAPE 362
H + I + ++ +D + ++S + F S R ++APE
Sbjct: 128 HT-LEPLIPRHALNSRSVXIDEDXTARISXADVK--------FSFQSPGRXYAPAWVAPE 178
Query: 363 LISRNFGTVSCKS-DVYGFGMVLLEM 387
+ + + +S D + F ++L E+
Sbjct: 179 ALQKKPEDTNRRSADXWSFAVLLWEL 204
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 21/206 (10%)
Query: 192 FTHKLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEE---FINEVSTIGRIHHVNVVQ 247
F ++G+G F +VYKG T +A L++ K + E F E + + H N+V+
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 248 LLGFCSEGSKR----ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYL 303
K LV E +G+L ++ + + + L+ +G+ +L
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYL----KRFKVXKIKVLRSWCRQILKGLQFL 145
Query: 304 HNGCDMCILHFDIKPHNILLDH-NFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPE 362
H I+H D+K NI + K+ D GLA K F A GT + APE
Sbjct: 146 HTRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATL--KRASFA--KAVIGTPEFXAPE 200
Query: 363 LISRNFGTVSCKSDVYGFGMVLLEMA 388
+ DVY FG LE A
Sbjct: 201 XYEEKYDE---SVDVYAFGXCXLEXA 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 21/209 (10%)
Query: 196 LGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFI-NEVSTIGRIH-HVNVVQLLGFC 252
LG+G V L T + AVK++E + EV + + H NV++L+ F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 253 SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCIL 312
E + LV+E M GS+ HI +K + F + + A + +LHN I
Sbjct: 81 EEEDRFYLVFEKMRGGSILSHI----HKRRHFNELEASVVVQDVASALDFLHN---KGIA 133
Query: 313 HFDIKPHNILLDH--NFIP-KVSDFGLAKFHPKENDFVSISATR-----GTIGYIAPELI 364
H D+KP NIL +H P K+ DF L D IS G+ Y+APE++
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 365 ---SRNFGTVSCKSDVYGFGMVLLEMAGG 390
S + D++ G++L + G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 241 HHVNVVQLLGFCSEGSKRAL-VYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARG 299
H V +V + G K L V E + G L I ++ Q F + EI
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRI--QDRGDQAFTEREASEIXKSIGEA 173
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDH---NFIPKVSDFGLAKFHPKENDFVSISATRGTI 356
+ YLH+ + I H D+KP N+L N I K++DFG AK N S++ T
Sbjct: 174 IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYTP 227
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMV 383
Y+APE++ SC D + G++
Sbjct: 228 YYVAPEVLGPEKYDKSC--DXWSLGVI 252
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 195 KLGQGGFGSVYKG-QLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHH-VNVVQLLGFC 252
KLG+G + V++ + + VK+L+ K + E+ + + N++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVK--KNKIKREIKILENLRGGPNIITLADIV 101
Query: 253 SEGSKR--ALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMC 310
+ R ALV+E + N + ++ QT ++ + + Y H+ M
Sbjct: 102 KDPVSRTPALVFEHVNNTDF-KQLY------QTLTDYDIRFYMYEILKALDYCHS---MG 151
Query: 311 ILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFG 369
I+H D+KPHN+++DH ++ D+GLA+F+ ++ A+R G PEL+ ++
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG---PELLV-DYQ 207
Query: 370 TVSCKSDVYGFGMVLLEM 387
D++ G +L M
Sbjct: 208 MYDYSLDMWSLGCMLASM 225
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 61/284 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSAEEFIN-------EVSTIGRI----HHV 243
LG+GGFG+V+ G T RL +A+K++ ++ ++ EV+ + ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 244 NVVQLLGFCSEGSKRALVYEF-MPNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTAR 298
V++LL + LV E +P L +I K E + F + + I +R
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR 158
Query: 299 GVAYLHNGCDMCILHFDIKPHNILLD-HNFIPKVSDFGLAKFHPKE--NDFVSISATRGT 355
GV +H DIK NIL+D K+ DFG E DF GT
Sbjct: 159 GV-----------VHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDF------DGT 201
Query: 356 IGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNA-IRSSKAYFPSWVYDQL 414
Y PE ISR+ + + V+ G++L +M G + I ++ +FP+ V
Sbjct: 202 RVYSPPEWISRH-QYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV---- 256
Query: 415 NKGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKVL 458
+ C + C+ K + RPS+ ++L
Sbjct: 257 ------------------SPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 51/246 (20%)
Query: 194 HKLGQGGFGSVYKG-QLHTGRLIAVKMLEN---SKFSAEEFINEVSTIGRIHHVNVVQLL 249
H +G G +G V + R++A+K + + + E++ + R++H +VV++L
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVL 118
Query: 250 GFC--SEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWE-KLQEIALGTARGVAYLHNG 306
+ K +Y + D F K + + E ++ + GV Y+H+
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSD---FKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175
Query: 307 CDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-------------FHPKEND--FVSISA 351
ILH D+KP N L++ + KV DFGLA+ P+E+D V+
Sbjct: 176 G---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 352 TRG----------TIGYIAPELI--SRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAI 399
T+ T Y APELI N+ DV+ G + E+ +N I
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSIGCIFAEL--------LNMI 281
Query: 400 RSSKAY 405
+ + AY
Sbjct: 282 KENVAY 287
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 95 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQHG-- 147
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 148 -IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 79 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQHG-- 131
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 132 -IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 95 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQHG-- 147
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 148 -IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 114/281 (40%), Gaps = 59/281 (20%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 246 VQLLGFCSEGSKRALVYEFM-PNGSLDRHIFPK----ENKGQTFGWEKLQEIALGTARGV 300
++LL + L+ E M P L I + E ++F W+ L+ V
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE--------AV 127
Query: 301 AYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGYI 359
+ HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VYS 180
Query: 360 APELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G + I + +F
Sbjct: 181 PPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF---------- 227
Query: 417 GGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 228 ----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQ---H 174
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 175 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 75 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQHG-- 127
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 128 -IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKEND------ 345
I + A V +LH+ ++H D+KP NI + + KV DFGL ++ +
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 346 ----FVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
+ + GT Y++PE I N S K D++ G++L E+
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFEL 269
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 144 PIVFLVFLIHKYRTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGS 203
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGSFGQ 112
Query: 204 VYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 256
V K H + +A+KM+ N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 257 KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDI 316
+ +E + S++ + K+NK Q F +++ A + + LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 317 KPHNILLDHNFIP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSC 373
KP NILL KV DFG + + + + I + Y APE+I +G
Sbjct: 227 KPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSRF----YRAPEVILGARYGM--- 278
Query: 374 KSDVYGFGMVLLEMAGG 390
D++ G +L E+ G
Sbjct: 279 PIDMWSLGCILAELLTG 295
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 76 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQ---H 127
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 128 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 96/241 (39%), Gaps = 23/241 (9%)
Query: 156 RTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRL 214
R +T DN L + P Y Y E + H +LG+G FG V++ + TG
Sbjct: 43 RLGPETEDNEGVLL--TEKLKPVDYEYREEVHWMTH-QPRLGRGSFGEVHRMKDKQTGFQ 99
Query: 215 IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
AVK + F EE + + +V L G EG + E + GSL + I
Sbjct: 100 CAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI 155
Query: 275 FPKENKGQTFGWEKLQEIALGTA-RGVAYLHNGCDMCILHFDIKPHNILLDHNFI-PKVS 332
K E LG A G+ YLH ILH D+K N+LL + +
Sbjct: 156 -----KQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALC 207
Query: 333 DFGLAK-FHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAG 389
DFG A P ++ GT ++APE++ K D++ ++L M
Sbjct: 208 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMMLHMLN 265
Query: 390 G 390
G
Sbjct: 266 G 266
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 155
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 250
Query: 417 GGDLELRN--VTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
GG + R +E + +I WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 154
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 249
Query: 417 GGDLELRN--VTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
GG + R +E + +I WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 144 PIVFLVFLIHKYRTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGS 203
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGSFGQ 112
Query: 204 VYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 256
V K H + +A+KM+ N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 257 KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDI 316
+ +E + S++ + K+NK Q F +++ A + + LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 317 KPHNILLDHNFIP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSC 373
KP NILL KV DFG + + + + I + Y APE+I +G
Sbjct: 227 KPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTXIQSR----FYRAPEVILGARYGM--- 278
Query: 374 KSDVYGFGMVLLEMAGG 390
D++ G +L E+ G
Sbjct: 279 PIDMWSLGCILAELLTG 295
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 63/283 (22%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 176 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 217
Query: 417 GGDLELRN--VTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
GG + R +E + +I WC+ ++ +DRP+ ++
Sbjct: 218 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 155
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 250
Query: 417 GGDLELRN--VTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
GG + R +E + +I WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 155
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 250
Query: 417 GGDLELRNVTEIESVIARKLCM-IGLWCIQVKAADRPSMTKV 457
GG + R E C + WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSXE-------CQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 63/283 (22%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 154
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 249
Query: 417 GGDLELRN--VTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
GG + R +E + +I WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G+V GR +AVK ML + F + H NV++ +CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRY--YCSE 78
Query: 255 GSKRALVYEF-MPNGSLDRHIFPKENKGQTFGWEK-LQEIAL--GTARGVAYLHNGCDMC 310
+ R L + N +L + K + +K I+L A GVA+LH+ +
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LK 135
Query: 311 ILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKFHPKENDF-VSISATRGT 355
I+H D+KP NIL+ N +SDFGL K ++ F +++ GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 356 IGYIAPELI--SRNFGT---VSCKSDVYGFGMV 383
G+ APEL+ S N T ++ D++ G V
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 105 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 155
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 156 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 208
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 209 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 250
Query: 417 GGDLELRNVTEIESVIARKLCM-IGLWCIQVKAADRPSMTKV 457
GG + R E C + WC+ ++ +DRP+ ++
Sbjct: 251 GGQVFFRQRVSXE-------CQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 115/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 154
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFPSWVYDQLNK 416
PE I R G + V+ G++L +M G P + +D+
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGD--------------IP-FEHDEEII 249
Query: 417 GGDLELRNVTEIESVIARKLCM-IGLWCIQVKAADRPSMTKV 457
GG + R E C + WC+ ++ +DRP+ ++
Sbjct: 250 GGQVFFRQRVSXE-------CQHLIRWCLALRPSDRPTFEEI 284
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 23/211 (10%)
Query: 195 KLGQGGFGSVYKGQLHTGRLIAVKML---ENSKFSAEEFINEVSTIGRI--HHVNVVQLL 249
++G GG V++ ++ A+K + E + + + NE++ + ++ H +++L
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 250 GFCSEGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDM 309
+ +Y M G++D + + K+ K WE+ + V +H
Sbjct: 123 DY---EITDQYIYMVMECGNIDLNSWLKKKKS-IDPWER-KSYWKNMLEAVHTIHQ---H 174
Query: 310 CILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI----- 364
I+H D+KP N L+ + K+ DFG+A + V + GT+ Y+ PE I
Sbjct: 175 GIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 365 SRNFG----TVSCKSDVYGFGMVLLEMAGGR 391
SR G +S KSDV+ G +L M G+
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 176 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------- 225
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 226 -------RVSSECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 75 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 125
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 126 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 178
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 179 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------- 228
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 229 -------RVSSECQHLIR--------WCLALRPSDRPTFEEI 255
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 228
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 229 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 76 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 126
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 127 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 179
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 180 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 227
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 228 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 256
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 144 PIVFLVFLIHKYRTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGS 203
P ++ + L K R + N + +Q S++ + + +A +G+G FG
Sbjct: 56 PEIYFLGLNAKKRQGMTGGPNNGGYDDDQGSYVQVPHDH---VAYRYEVLKVIGKGXFGQ 112
Query: 204 VYKGQLH-TGRLIAVKMLENSKFSAEEFINEVSTIGRIHH------VNVVQLLGFCSEGS 256
V K H + +A+KM+ N K + E+ + + +NV+ +L + +
Sbjct: 113 VVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172
Query: 257 KRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTARGVAYLHNGCDMCILHFDI 316
+ +E + S++ + K+NK Q F +++ A + + LH I+H D+
Sbjct: 173 HICMTFELL---SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDL 226
Query: 317 KPHNILLDHNFIP--KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELI-SRNFGTVSC 373
KP NILL KV DFG + + + + I + Y APE+I +G
Sbjct: 227 KPENILLKQQGRSGIKVIDFG-SSCYEHQRVYXXIQSR----FYRAPEVILGARYGM--- 278
Query: 374 KSDVYGFGMVLLEMAGG 390
D++ G +L E+ G
Sbjct: 279 PIDMWSLGCILAELLTG 295
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 113/300 (37%), Gaps = 60/300 (20%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENS------------KFSAEEFINEVSTIGRIHHV 243
+ G +G+V G G +A+K + N+ F + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 244 NVVQLLGFCSEGSKRA-----LVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIAL 294
N++ L + A LV E M D+ I Q F + I L
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH----ILL 145
Query: 295 GTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG 354
G LH + ++H D+ P NILL N + DF LA+ + + R
Sbjct: 146 G-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR- 197
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFP-SWVYDQ 413
Y APEL+ + F + D++ G V+ EM + KA F S Y+Q
Sbjct: 198 --WYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQ 242
Query: 414 LNK----GGDLELRNVTEIESVIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLE 462
LNK G ++ +V S AR L W V AD ++ + +MLE
Sbjct: 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE 302
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR---NF 368
+H DIKP N+LLD N +++DFG + ++ V S GT YI+PE++
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 369 GTVSCKSDVYGFGMVLLEMAGGRRNSNMNAI---------RSSKAYFPSWVYDQLNKGGD 419
G + D + G+ + EM G ++ + FPS V D + D
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 315
Query: 420 LELRNVTEIESVIAR 434
L R + E + +
Sbjct: 316 LIQRLICSRERRLGQ 330
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 228
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 229 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 113/300 (37%), Gaps = 60/300 (20%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVKMLENS------------KFSAEEFINEVSTIGRIHHV 243
+ G +G+V G G +A+K + N+ F + + E+ + HH
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 244 NVVQLLGFCSEGSKRA-----LVYEFMPNGSL----DRHIFPKENKGQTFGWEKLQEIAL 294
N++ L + A LV E M D+ I Q F + I L
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYH----ILL 145
Query: 295 GTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRG 354
G LH + ++H D+ P NILL N + DF LA+ + + R
Sbjct: 146 G-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR- 197
Query: 355 TIGYIAPELISRNFGTVSCKSDVYGFGMVLLEMAGGRRNSNMNAIRSSKAYFP-SWVYDQ 413
Y APEL+ + F + D++ G V+ EM + KA F S Y+Q
Sbjct: 198 --WYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMF------------NRKALFRGSTFYNQ 242
Query: 414 LNK----GGDLELRNVTEIESVIARKLCMIGL-------WCIQVKAADRPSMTKVLEMLE 462
LNK G ++ +V S AR L W V AD ++ + +MLE
Sbjct: 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLE 302
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 77 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 127
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 128 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 180
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 181 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 228
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 229 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 313 HFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVS 372
H D+KP NIL+ + + DFG+A E + T GT+ Y APE S + T
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEK-LTQLGNTVGTLYYXAPERFSESHATY- 214
Query: 373 CKSDVYGFGMVLLEMAGG 390
++D+Y VL E G
Sbjct: 215 -RADIYALTCVLYECLTG 231
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 141
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 142 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 194
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 195 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 242
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 243 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 13/135 (9%)
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR---NF 368
+H DIKP N+LLD N +++DFG + ++ V S GT YI+PE++
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 369 GTVSCKSDVYGFGMVLLEMAGGRRNSNMNAI---------RSSKAYFPSWVYDQLNKGGD 419
G + D + G+ + EM G ++ + FPS V D + D
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 331
Query: 420 LELRNVTEIESVIAR 434
L R + E + +
Sbjct: 332 LIQRLICSRERRLGQ 346
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 191 HFTHKLGQGGFGSVY-KGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 244
H KLG G F +V+ + + +A+K++++++ E ++E+ + + + +
Sbjct: 24 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 83
Query: 245 ---VVQLLGFCS----EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
VVQLL G+ +V+E + + L I ++ Q +++I
Sbjct: 84 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVKKIIQQVL 140
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHN 326
+G+ YLH C I+H DIKP NILL N
Sbjct: 141 QGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 104 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 154
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 155 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 207
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 208 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 255
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 256 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 284
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 143 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 195
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 196 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 243
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 244 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 72 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 122
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 123 VRHCHN---XGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 175
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 176 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ------- 225
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R E + +I WC+ ++ +DRP+ ++
Sbjct: 226 -------RVSXECQHLIR--------WCLALRPSDRPTFEEI 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 156 RTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRL 214
R +T DN L + P Y Y E + H ++G+G FG V++ + TG
Sbjct: 45 RLGPETEDNEGVLL--TEKLKPVDYEYREEVHWMTH-QPRVGRGSFGEVHRMKDKQTGFQ 101
Query: 215 IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
AVK + F EE + + +V L G EG + E + GSL + I
Sbjct: 102 CAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI 157
Query: 275 -----FPKENKGQTFGWEKLQEIALGTA-RGVAYLHNGCDMCILHFDIKPHNILLDHNFI 328
P E++ + LG A G+ YLH ILH D+K N+LL +
Sbjct: 158 KQMGCLP-EDRALYY---------LGQALEGLEYLHT---RRILHGDVKADNVLLSSDGS 204
Query: 329 -PKVSDFGLAK-FHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
+ DFG A P ++ GT ++APE++ K D++ ++
Sbjct: 205 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMM 262
Query: 385 LEMAGG 390
L M G
Sbjct: 263 LHMLNG 268
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 111 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 161
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 162 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 214
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 215 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 262
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 263 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 291
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 191 HFTHKLGQGGFGSVY-KGQLHTGRLIAVKMLENSKFSAEEFINEVSTIGRIHHVN----- 244
H KLG G F +V+ + + +A+K++++++ E ++E+ + + + +
Sbjct: 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPN 99
Query: 245 ---VVQLLGFCS----EGSKRALVYEFMPNGSLDRHIFPKENKGQTFGWEKLQEIALGTA 297
VVQLL G+ +V+E + + L I ++ Q +++I
Sbjct: 100 REMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII---KSNYQGLPLPCVKKIIQQVL 156
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHN 326
+G+ YLH C I+H DIKP NILL N
Sbjct: 157 QGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 99/246 (40%), Gaps = 33/246 (13%)
Query: 156 RTTLQTVDNIEKFLHNQQSWMPKRYSYPEIIAVTNHFTHKLGQGGFGSVYKGQ-LHTGRL 214
R +T DN L + P Y Y E + H ++G+G FG V++ + TG
Sbjct: 29 RLGPETEDNEGVLL--TEKLKPVDYEYREEVHWMTH-QPRVGRGSFGEVHRMKDKQTGFQ 85
Query: 215 IAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSEGSKRALVYEFMPNGSLDRHI 274
AVK + F EE + + +V L G EG + E + GSL + I
Sbjct: 86 CAVKKVRLEVFRVEELV----ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI 141
Query: 275 -----FPKENKGQTFGWEKLQEIALGTA-RGVAYLHNGCDMCILHFDIKPHNILLDHNFI 328
P E++ + LG A G+ YLH ILH D+K N+LL +
Sbjct: 142 KQMGCLP-EDRALYY---------LGQALEGLEYLHT---RRILHGDVKADNVLLSSDGS 188
Query: 329 -PKVSDFGLAK-FHPK--ENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVL 384
+ DFG A P ++ GT ++APE++ K D++ ++
Sbjct: 189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK--PCDAKVDIWSSCCMM 246
Query: 385 LEMAGG 390
L M G
Sbjct: 247 LHMLNG 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 119 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 169
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 170 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 222
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 223 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 270
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R +E + +I WC+ ++ +DRP+ ++
Sbjct: 271 -----RQRVSSECQHLIR--------WCLALRPSDRPTFEEI 299
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 312 LHFDIKPHNILLDHNFIPKVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISR---NF 368
+H DIKP NIL+D N +++DFG + E+ V S GT YI+PE++
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 369 GTVSCKSDVYGFGMVLLEMAGG 390
G + D + G+ + EM G
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYG 277
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G+V GR +AVK ML + F + H NV++ +CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRY--YCSE 96
Query: 255 GSKRALVYEF-MPNGSLDRHIFPKENKGQTFGWEK-LQEIAL--GTARGVAYLHNGCDMC 310
+ R L + N +L + K + +K I+L A GVA+LH+ +
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LK 153
Query: 311 ILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKFHPKENDF-VSISATRGT 355
I+H D+KP NIL+ N +SDFGL K + F +++ GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 356 IGYIAPELISRNFGTVSCKS-DVYGFGMV 383
G+ APEL+ + +S D++ G V
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 99/218 (45%), Gaps = 36/218 (16%)
Query: 196 LGQGGFGSVYKGQLHT--GRLIAVKMLENSKFSAEEFINEVSTIGRIHHVNVVQL----- 248
LG GG G V+ + R+ K++ S + + E+ I R+ H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 249 ---------LGFCSEGSKRALVYEFMPN---GSLDRHIFPKENKGQTFGWEKLQEIALGT 296
+G +E + +V E+M L++ +E+ + F ++ L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH-ARLFMYQLL------- 130
Query: 297 ARGVAYLHNGCDMCILHFDIKPHNILLD-HNFIPKVSDFGLAK-FHPKENDFVSISATRG 354
RG+ Y+H+ +LH D+KP N+ ++ + + K+ DFGLA+ P + +S
Sbjct: 131 -RGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 355 TIGYIAPE-LISRNFGTVSCKSDVYGFGMVLLEMAGGR 391
T Y +P L+S N T + D++ G + EM G+
Sbjct: 187 TKWYRSPRLLLSPNNYTKAI--DMWAAGCIFAEMLTGK 222
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 232 NEVSTIGRIHHVNVVQLLG--FCSEGSKRALVYEFMPNG------SLDRHIFPKENKGQT 283
E+ + R+ H NV+QL+ + E K +V E+ G S+ FP Q
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPV---CQA 111
Query: 284 FGWEKLQEIALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIPKVSDFGLAK-FHPK 342
G+ G+ YLH+ I+H DIKP N+LL K+S G+A+ HP
Sbjct: 112 HGY------FCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162
Query: 343 ENDFVSISATRGTIGYIAPELISRNFGTVSC-KSDVYGFGMVLLEMAGG 390
D + ++G+ + PE I+ T S K D++ G+ L + G
Sbjct: 163 AAD-DTCRTSQGSPAFQPPE-IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G+V GR +AVK ML + F + H NV++ +CSE
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRY--YCSE 96
Query: 255 GSKRALVYEF-MPNGSLDRHIFPKENKGQTFGWEK-LQEIAL--GTARGVAYLHNGCDMC 310
+ R L + N +L + K + +K I+L A GVA+LH+ +
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LK 153
Query: 311 ILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKFHPKENDF-VSISATRGT 355
I+H D+KP NIL+ N +SDFGL K + F +++ GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 356 IGYIAPELISRNFGTVSCKS-DVYGFGMV 383
G+ APEL+ + +S D++ G V
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCV 242
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 46/244 (18%)
Query: 180 YSYPEIIAVTNHF--THKLGQGGFGSVYKGQ-LHTGRLIAVKMLENSKFSAEEFINEVST 236
+S+ + + + N F K+G G FG V Q + + AVK++ N K E
Sbjct: 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADI 84
Query: 237 IGRIHHVNVVQLLGFCSEGSKRALVYEFM-----PNGSLDRHIFPKENKGQTFGWEKLQE 291
+ +I + ++ G + + Y+ M P G I + N F E ++
Sbjct: 85 LKKIQNDDINNNNIVKYHG--KFMYYDHMCLIFEPLGPSLYEIITRNNYN-GFHIEDIKL 141
Query: 292 IALGTARGVAYLHNGCDMCILHFDIKPHNILLDHNFIP---------------------- 329
+ + + YL M + H D+KP NILLD +
Sbjct: 142 YCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS 198
Query: 330 ---KVSDFGLAKFHPKENDFVSISATRGTIGYIAPELISRNFGTVSCKSDVYGFGMVLLE 386
K+ DFG A F K + SI TR Y APE+I N G SD++ FG VL E
Sbjct: 199 TGIKLIDFGCATF--KSDYHGSIINTR---QYRAPEVI-LNLGW-DVSSDMWSFGCVLAE 251
Query: 387 MAGG 390
+ G
Sbjct: 252 LYTG 255
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 196 LGQGGFGSVYKGQLHTGRLIAVK-MLENSKFSAEEFINEVSTIGRIHHVNVVQLLGFCSE 254
LG G G+V GR +AVK ML + F + H NV++ +CSE
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRY--YCSE 78
Query: 255 GSKRALVYEF-MPNGSLDRHIFPKENKGQTFGWEK-LQEIAL--GTARGVAYLHNGCDMC 310
+ R L + N +L + K + +K I+L A GVA+LH+ +
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LK 135
Query: 311 ILHFDIKPHNILLD-------------HNFIPKVSDFGL-AKFHPKENDF-VSISATRGT 355
I+H D+KP NIL+ N +SDFGL K + F +++ GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 195
Query: 356 IGYIAPELI--SRNFGT---VSCKSDVYGFGMV 383
G+ APEL+ S N T ++ D++ G V
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 91 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 141
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 142 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 194
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 195 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 242
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R E + +I WC+ ++ +DRP+ ++
Sbjct: 243 -----RQRVSXECQHLIR--------WCLALRPSDRPTFEEI 271
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 99 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 149
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN C +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 150 VRHCHN-CG--VLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 202
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 203 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 250
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R E + +I WC+ ++ +DRP+ ++
Sbjct: 251 -----RQRVSXECQHLIR--------WCLALRPSDRPTFEEI 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 61/282 (21%)
Query: 196 LGQGGFGSVYKGQLHTGRL-IAVKMLENSKFSA-EEFIN------EVSTIGRIHH--VNV 245
LG GGFGSVY G + L +A+K +E + S E N EV + ++ V
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 246 VQLLGFCSEGSKRALVYEFMPNGSLDRHIF------PKENKGQTFGWEKLQEIALGTARG 299
++LL + L+ E P D F +E ++F W+ L+
Sbjct: 92 IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELARSFFWQVLE--------A 142
Query: 300 VAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTIGY 358
V + HN +LH DIK NIL+D N K+ DFG K+ + TR Y
Sbjct: 143 VRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL-KDTVYTDFDGTR---VY 195
Query: 359 IAPELIS--RNFGTVSCKSDVYGFGMVLLEMAGGRRN-SNMNAIRSSKAYFPSWVYDQLN 415
PE I R G + V+ G++L +M G + I + +F
Sbjct: 196 SPPEWIRYHRYHGRSAA---VWSLGILLYDMVCGDIPFEHDEEIIRGQVFF--------- 243
Query: 416 KGGDLELRNVTEIESVIARKLCMIGLWCIQVKAADRPSMTKV 457
R E + +I WC+ ++ +DRP+ ++
Sbjct: 244 -----RQRVSXECQHLIR--------WCLALRPSDRPTFEEI 272
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 298 RGVAYLHNGCDMCILHFDIKPHNILLDHNFIP-KVSDFGLAKFHPKENDFVSISATRGTI 356
+ + Y H+ M I+H D+KPHN+L+DH ++ D+GLA+F+ ++ A+R
Sbjct: 142 KALDYCHS---MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFK 198
Query: 357 GYIAPELISRNFGTVSCKSDVYGFGMVLLEM 387
G PEL+ ++ D++ G +L M
Sbjct: 199 G---PELLV-DYQMYDYSLDMWSLGCMLASM 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.427
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,352,834
Number of Sequences: 62578
Number of extensions: 639660
Number of successful extensions: 3442
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 336
Number of HSP's that attempted gapping in prelim test: 1444
Number of HSP's gapped (non-prelim): 1150
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)