Query 010439
Match_columns 510
No_of_seqs 440 out of 4377
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 00:32:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010439.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010439hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 100.0 9.2E-37 2E-41 258.1 10.5 172 14-192 35-208 (226)
2 KOG4412 26S proteasome regulat 100.0 4.5E-34 9.9E-39 241.8 12.0 206 17-239 3-212 (226)
3 PHA02791 ankyrin-like protein; 100.0 2.7E-33 5.9E-38 269.4 18.1 205 11-236 24-231 (284)
4 PHA02878 ankyrin repeat protei 100.0 2.1E-31 4.6E-36 279.2 20.6 209 14-240 34-309 (477)
5 PHA02874 ankyrin repeat protei 100.0 3.4E-31 7.3E-36 274.5 21.9 215 10-242 28-265 (434)
6 PHA02946 ankyin-like protein; 100.0 1.6E-31 3.4E-36 275.4 17.7 193 6-204 61-258 (446)
7 PHA02716 CPXV016; CPX019; EVM0 100.0 1.9E-31 4E-36 283.3 17.4 180 8-193 167-404 (764)
8 PHA02791 ankyrin-like protein; 100.0 7.4E-31 1.6E-35 252.6 20.0 164 16-187 60-226 (284)
9 PHA02716 CPXV016; CPX019; EVM0 100.0 7.6E-31 1.7E-35 278.6 18.9 174 6-184 201-432 (764)
10 PHA03100 ankyrin repeat protei 100.0 1.1E-30 2.3E-35 274.8 19.0 217 7-239 58-291 (480)
11 KOG0509 Ankyrin repeat and DHH 100.0 5E-31 1.1E-35 264.0 14.8 209 18-241 45-255 (600)
12 PHA03095 ankyrin-like protein; 100.0 1E-30 2.3E-35 274.2 17.8 221 6-241 36-267 (471)
13 PHA02875 ankyrin repeat protei 100.0 2.8E-30 6.1E-35 266.2 20.3 220 7-239 25-246 (413)
14 PHA02874 ankyrin repeat protei 100.0 5E-30 1.1E-34 265.7 21.9 218 7-242 58-299 (434)
15 PHA03095 ankyrin-like protein; 100.0 4.2E-30 9.1E-35 269.7 20.6 221 6-241 72-300 (471)
16 KOG0509 Ankyrin repeat and DHH 100.0 5E-31 1.1E-35 264.0 12.9 186 7-198 68-255 (600)
17 PHA03100 ankyrin repeat protei 100.0 4.3E-30 9.3E-35 270.2 18.6 216 10-241 28-260 (480)
18 PHA02875 ankyrin repeat protei 100.0 1.5E-29 3.4E-34 260.7 20.9 209 17-241 2-212 (413)
19 PHA02859 ankyrin repeat protei 100.0 2E-29 4.4E-34 233.9 18.6 178 14-197 18-201 (209)
20 PHA02946 ankyin-like protein; 100.0 1.7E-29 3.7E-34 260.3 20.0 209 17-243 37-254 (446)
21 PHA02876 ankyrin repeat protei 100.0 2.4E-29 5.3E-34 274.8 21.8 229 6-242 167-453 (682)
22 PHA02878 ankyrin repeat protei 100.0 2.9E-29 6.4E-34 263.0 19.5 185 7-199 60-311 (477)
23 PHA02876 ankyrin repeat protei 100.0 8E-29 1.7E-33 270.8 21.1 230 7-252 263-496 (682)
24 PHA02798 ankyrin-like protein; 100.0 1.1E-28 2.3E-33 259.3 19.2 200 6-208 60-311 (489)
25 PHA02989 ankyrin repeat protei 100.0 2E-28 4.4E-33 257.5 19.7 219 6-241 25-299 (494)
26 KOG0510 Ankyrin repeat protein 100.0 7E-28 1.5E-32 245.7 17.6 236 7-256 144-402 (929)
27 PHA02798 ankyrin-like protein; 100.0 2.2E-27 4.8E-32 249.3 20.6 217 9-241 29-301 (489)
28 KOG0510 Ankyrin repeat protein 100.0 1.1E-27 2.3E-32 244.4 15.9 233 8-252 112-363 (929)
29 PHA02989 ankyrin repeat protei 99.9 4.2E-27 9.1E-32 247.5 19.7 200 6-209 59-310 (494)
30 PHA02859 ankyrin repeat protei 99.9 8.6E-27 1.9E-31 216.4 17.3 151 10-165 44-202 (209)
31 PHA02795 ankyrin-like protein; 99.9 9.4E-27 2E-31 232.3 18.4 168 12-185 111-292 (437)
32 KOG0508 Ankyrin repeat protein 99.9 2.4E-27 5.2E-32 228.1 11.1 188 14-208 39-235 (615)
33 PHA02917 ankyrin-like protein; 99.9 2E-26 4.4E-31 246.4 19.2 218 6-239 21-275 (661)
34 KOG0508 Ankyrin repeat protein 99.9 5E-27 1.1E-31 225.9 12.0 157 13-176 80-236 (615)
35 KOG0514 Ankyrin repeat protein 99.9 5.1E-27 1.1E-31 219.2 10.2 166 7-177 258-429 (452)
36 PHA02795 ankyrin-like protein; 99.9 1.5E-25 3.1E-30 223.8 17.4 181 7-200 72-266 (437)
37 PHA02730 ankyrin-like protein; 99.9 5E-25 1.1E-29 230.1 18.8 198 9-209 32-258 (672)
38 PLN03192 Voltage-dependent pot 99.9 4.5E-25 9.6E-30 244.7 19.4 167 14-188 522-688 (823)
39 KOG0502 Integral membrane anky 99.9 2.4E-25 5.2E-30 194.4 8.7 180 13-200 92-271 (296)
40 PHA02743 Viral ankyrin protein 99.9 2.8E-24 6.2E-29 192.1 14.6 145 6-155 9-162 (166)
41 KOG4177 Ankyrin [Cell wall/mem 99.9 1.6E-24 3.4E-29 234.6 13.2 222 7-239 430-652 (1143)
42 PHA02730 ankyrin-like protein; 99.9 1E-23 2.2E-28 220.3 18.1 186 6-197 224-505 (672)
43 PHA02792 ankyrin-like protein; 99.9 2.8E-24 6.1E-29 222.2 13.3 217 6-240 94-452 (631)
44 PHA02917 ankyrin-like protein; 99.9 8.6E-24 1.9E-28 226.3 16.2 204 30-249 12-250 (661)
45 KOG4177 Ankyrin [Cell wall/mem 99.9 7.7E-25 1.7E-29 237.0 8.1 219 6-240 396-615 (1143)
46 KOG0502 Integral membrane anky 99.9 9.9E-25 2.1E-29 190.6 7.0 174 6-188 118-291 (296)
47 KOG0507 CASK-interacting adapt 99.9 3.4E-24 7.4E-29 217.4 10.7 220 6-240 38-263 (854)
48 PHA02743 Viral ankyrin protein 99.9 2.5E-23 5.3E-28 186.0 14.0 144 39-188 9-161 (166)
49 PHA02741 hypothetical protein; 99.9 3.6E-23 7.8E-28 185.8 14.0 131 11-144 15-157 (169)
50 PHA02792 ankyrin-like protein; 99.9 1E-22 2.2E-27 210.6 17.9 181 9-197 167-452 (631)
51 PLN03192 Voltage-dependent pot 99.9 8.6E-23 1.9E-27 226.5 17.2 151 6-164 547-698 (823)
52 PHA02884 ankyrin repeat protei 99.9 1.9E-22 4.1E-27 194.2 17.0 157 10-179 25-186 (300)
53 KOG0505 Myosin phosphatase, re 99.9 9.3E-23 2E-27 200.6 11.8 174 21-200 44-276 (527)
54 TIGR00870 trp transient-recept 99.9 3.7E-22 8E-27 220.1 16.4 225 15-249 15-276 (743)
55 PHA02741 hypothetical protein; 99.9 4.6E-22 1E-26 178.6 13.6 131 44-180 15-157 (169)
56 PHA02736 Viral ankyrin protein 99.9 1.7E-22 3.7E-27 178.7 10.5 134 8-146 8-153 (154)
57 KOG0514 Ankyrin repeat protein 99.9 6.7E-22 1.5E-26 185.1 9.2 160 42-208 260-427 (452)
58 TIGR00870 trp transient-recept 99.9 2.7E-21 5.9E-26 213.3 15.5 197 7-210 42-279 (743)
59 KOG0512 Fetal globin-inducing 99.9 7E-21 1.5E-25 160.6 13.3 143 18-166 64-209 (228)
60 PHA02736 Viral ankyrin protein 99.9 1.9E-21 4.2E-26 172.0 10.5 132 43-182 10-153 (154)
61 PHA02884 ankyrin repeat protei 99.8 3.1E-20 6.8E-25 178.9 15.8 131 44-177 26-159 (300)
62 KOG0505 Myosin phosphatase, re 99.8 5.8E-21 1.3E-25 188.0 10.2 154 7-164 63-273 (527)
63 KOG0507 CASK-interacting adapt 99.8 9.2E-20 2E-24 185.4 13.2 208 18-242 4-232 (854)
64 KOG0195 Integrin-linked kinase 99.8 2.3E-20 5E-25 169.6 7.2 155 25-185 8-163 (448)
65 KOG0195 Integrin-linked kinase 99.8 1E-19 2.2E-24 165.4 9.5 136 8-146 25-160 (448)
66 KOG0512 Fetal globin-inducing 99.8 4.1E-19 8.9E-24 150.0 11.6 147 52-204 65-214 (228)
67 PF12796 Ank_2: Ankyrin repeat 99.8 1E-18 2.2E-23 139.3 11.1 89 21-116 1-89 (89)
68 cd00204 ANK ankyrin repeats; 99.8 7.1E-18 1.5E-22 142.7 14.6 124 13-139 3-126 (126)
69 KOG4369 RTK signaling protein 99.8 1.2E-18 2.7E-23 182.1 8.6 217 14-243 754-971 (2131)
70 KOG3676 Ca2+-permeable cation 99.8 6.7E-18 1.5E-22 174.3 13.7 164 10-177 136-330 (782)
71 PF12796 Ank_2: Ankyrin repeat 99.7 1.4E-17 2.9E-22 132.8 10.9 89 54-151 1-89 (89)
72 cd00204 ANK ankyrin repeats; 99.7 5.5E-17 1.2E-21 137.2 15.0 125 45-175 2-126 (126)
73 KOG4369 RTK signaling protein 99.7 7.1E-18 1.5E-22 176.5 7.3 219 7-239 780-1035(2131)
74 KOG3676 Ca2+-permeable cation 99.7 3.9E-16 8.4E-21 161.4 11.5 125 14-141 181-330 (782)
75 COG0666 Arp FOG: Ankyrin repea 99.6 1.4E-15 3E-20 142.7 13.4 129 44-178 67-203 (235)
76 KOG4214 Myotrophin and similar 99.6 1E-15 2.3E-20 115.8 7.8 103 18-124 3-105 (117)
77 KOG4214 Myotrophin and similar 99.6 3.2E-15 6.8E-20 113.2 9.5 102 52-159 4-105 (117)
78 COG0666 Arp FOG: Ankyrin repea 99.6 1.8E-14 3.9E-19 135.1 15.6 129 11-142 67-203 (235)
79 KOG1710 MYND Zn-finger and ank 99.6 1.4E-14 3E-19 132.2 11.4 125 15-141 10-134 (396)
80 PTZ00322 6-phosphofructo-2-kin 99.5 3E-14 6.5E-19 154.0 12.3 106 19-127 84-196 (664)
81 PTZ00322 6-phosphofructo-2-kin 99.5 3.4E-14 7.5E-19 153.6 12.2 103 52-159 84-193 (664)
82 KOG4172 Predicted E3 ubiquitin 99.5 2.4E-15 5.2E-20 100.3 -1.7 54 457-510 8-62 (62)
83 KOG0515 p53-interacting protei 99.5 1.5E-13 3.2E-18 134.8 9.6 91 20-113 553-643 (752)
84 PF13857 Ank_5: Ankyrin repeat 99.5 5.1E-14 1.1E-18 101.0 4.8 55 36-93 1-56 (56)
85 PF13857 Ank_5: Ankyrin repeat 99.5 5.4E-14 1.2E-18 100.9 4.7 55 70-126 1-56 (56)
86 KOG1710 MYND Zn-finger and ank 99.4 9.1E-13 2E-17 120.4 10.8 120 50-175 12-132 (396)
87 PF13637 Ank_4: Ankyrin repeat 99.4 2.9E-13 6.3E-18 96.5 6.1 54 17-71 1-54 (54)
88 PF13637 Ank_4: Ankyrin repeat 99.4 3.7E-13 8.1E-18 96.0 6.6 53 86-138 1-53 (54)
89 KOG0515 p53-interacting protei 99.4 1.4E-12 3E-17 128.1 10.1 118 54-176 554-673 (752)
90 PF13920 zf-C3HC4_3: Zinc fing 99.3 1.2E-12 2.5E-17 91.4 3.3 49 456-504 2-50 (50)
91 KOG4275 Predicted E3 ubiquitin 99.1 3.9E-12 8.5E-17 116.0 -1.4 51 456-510 300-350 (350)
92 KOG4265 Predicted E3 ubiquitin 99.1 2E-11 4.3E-16 116.0 2.8 56 454-509 288-343 (349)
93 PLN03208 E3 ubiquitin-protein 98.9 1.1E-09 2.3E-14 96.6 5.3 54 454-508 16-87 (193)
94 KOG0317 Predicted E3 ubiquitin 98.9 6.6E-10 1.4E-14 102.4 3.8 48 455-503 238-285 (293)
95 KOG0823 Predicted E3 ubiquitin 98.9 1.2E-09 2.6E-14 97.8 4.5 56 453-509 44-104 (230)
96 KOG0320 Predicted E3 ubiquitin 98.9 2.9E-09 6.3E-14 91.0 6.4 53 455-508 130-186 (187)
97 KOG0783 Uncharacterized conser 98.9 9.7E-10 2.1E-14 113.7 3.9 99 28-128 28-128 (1267)
98 KOG0818 GTPase-activating prot 98.9 8.1E-09 1.7E-13 101.3 9.3 100 44-145 121-226 (669)
99 PF13923 zf-C3HC4_2: Zinc fing 98.8 2.1E-09 4.6E-14 70.5 2.6 38 459-497 1-39 (39)
100 KOG0506 Glutaminase (contains 98.8 4.5E-09 9.7E-14 102.6 5.4 94 47-143 503-597 (622)
101 KOG0818 GTPase-activating prot 98.8 2E-08 4.3E-13 98.6 9.1 87 19-108 135-222 (669)
102 PF13639 zf-RING_2: Ring finge 98.8 2.9E-09 6.3E-14 72.0 2.1 40 458-498 2-44 (44)
103 KOG0783 Uncharacterized conser 98.8 4.2E-09 9.1E-14 109.1 4.2 83 10-95 45-128 (1267)
104 KOG0506 Glutaminase (contains 98.8 7E-09 1.5E-13 101.3 5.4 93 84-179 504-597 (622)
105 PHA02929 N1R/p28-like protein; 98.8 6.1E-09 1.3E-13 96.1 4.2 51 456-507 174-232 (238)
106 KOG0782 Predicted diacylglycer 98.8 3.9E-08 8.5E-13 97.9 9.9 118 21-141 870-989 (1004)
107 KOG1571 Predicted E3 ubiquitin 98.7 2.8E-09 6E-14 101.6 1.5 54 453-510 302-355 (355)
108 PF15227 zf-C3HC4_4: zinc fing 98.7 7E-09 1.5E-13 68.8 2.9 38 459-497 1-42 (42)
109 PF13606 Ank_3: Ankyrin repeat 98.7 1.7E-08 3.7E-13 61.8 3.9 28 50-78 2-29 (30)
110 PF13606 Ank_3: Ankyrin repeat 98.7 1.9E-08 4.2E-13 61.5 3.9 28 86-113 2-29 (30)
111 PF00023 Ank: Ankyrin repeat H 98.7 3.1E-08 6.8E-13 62.4 4.4 30 50-80 2-31 (33)
112 KOG0705 GTPase-activating prot 98.7 5.6E-08 1.2E-12 97.2 8.3 84 62-145 635-720 (749)
113 KOG0705 GTPase-activating prot 98.6 7.2E-08 1.6E-12 96.5 8.3 92 88-182 626-721 (749)
114 PF00023 Ank: Ankyrin repeat H 98.6 3.5E-08 7.6E-13 62.2 3.9 33 16-48 1-33 (33)
115 KOG0522 Ankyrin repeat protein 98.6 1.1E-07 2.3E-12 94.8 7.6 86 20-108 23-110 (560)
116 KOG0782 Predicted diacylglycer 98.6 2E-07 4.3E-12 93.0 9.3 117 55-177 871-989 (1004)
117 KOG0522 Ankyrin repeat protein 98.6 1.4E-07 3E-12 94.0 7.9 87 52-141 22-110 (560)
118 PHA02926 zinc finger-like prot 98.5 4.8E-08 1E-12 86.8 2.7 50 455-505 169-233 (242)
119 KOG3609 Receptor-activated Ca2 98.5 4.9E-07 1.1E-11 95.3 9.8 123 14-146 22-158 (822)
120 PF14634 zf-RING_5: zinc-RING 98.4 1.5E-07 3.3E-12 63.4 2.9 41 458-499 1-44 (44)
121 PF00097 zf-C3HC4: Zinc finger 98.4 1.3E-07 2.8E-12 62.9 2.5 38 459-497 1-41 (41)
122 cd00162 RING RING-finger (Real 98.4 1.8E-07 3.9E-12 63.4 2.9 43 458-501 1-45 (45)
123 KOG0521 Putative GTPase activa 98.4 1.5E-07 3.3E-12 101.8 3.5 102 71-175 641-742 (785)
124 KOG2384 Major histocompatibili 98.4 1.4E-06 3.1E-11 75.7 8.3 71 74-146 2-73 (223)
125 smart00504 Ubox Modified RING 98.4 2.6E-07 5.7E-12 67.9 3.3 45 457-502 2-46 (63)
126 TIGR00599 rad18 DNA repair pro 98.4 2.6E-07 5.7E-12 91.8 3.6 50 453-503 23-72 (397)
127 COG5574 PEX10 RING-finger-cont 98.3 2.2E-07 4.8E-12 84.9 2.2 46 456-502 215-262 (271)
128 KOG0521 Putative GTPase activa 98.3 6.4E-07 1.4E-11 97.1 6.2 100 37-139 641-742 (785)
129 smart00184 RING Ring finger. E 98.3 4.9E-07 1.1E-11 59.0 3.0 38 459-497 1-39 (39)
130 PF13445 zf-RING_UBOX: RING-ty 98.3 3.6E-07 7.9E-12 60.5 2.0 35 459-495 1-43 (43)
131 KOG2384 Major histocompatibili 98.3 1.6E-06 3.5E-11 75.4 6.5 65 41-108 3-68 (223)
132 KOG3609 Receptor-activated Ca2 98.3 2.5E-06 5.4E-11 90.1 8.7 126 49-185 24-161 (822)
133 KOG2164 Predicted E3 ubiquitin 98.2 5.8E-07 1.3E-11 89.7 2.9 52 456-508 186-244 (513)
134 KOG0520 Uncharacterized conser 98.2 1.5E-06 3.2E-11 93.6 5.2 122 14-139 571-700 (975)
135 PF12678 zf-rbx1: RING-H2 zinc 98.2 1.6E-06 3.5E-11 65.4 3.5 41 457-498 20-73 (73)
136 KOG0287 Postreplication repair 98.2 6.3E-07 1.4E-11 84.1 1.4 48 455-503 22-69 (442)
137 COG5432 RAD18 RING-finger-cont 98.1 1.8E-06 3.9E-11 79.3 2.8 46 457-503 26-71 (391)
138 KOG0978 E3 ubiquitin ligase in 98.1 6.2E-07 1.3E-11 94.0 -0.4 51 457-508 644-697 (698)
139 KOG0511 Ankyrin repeat protein 98.1 2.2E-05 4.7E-10 75.4 9.6 56 19-75 38-93 (516)
140 KOG0511 Ankyrin repeat protein 98.1 1.5E-05 3.3E-10 76.4 8.5 85 51-141 37-121 (516)
141 KOG0520 Uncharacterized conser 98.0 5E-06 1.1E-10 89.7 5.6 129 44-177 568-702 (975)
142 KOG1100 Predicted E3 ubiquitin 97.9 2.3E-06 5E-11 78.1 0.7 47 458-508 160-206 (207)
143 COG5540 RING-finger-containing 97.9 4.3E-06 9.3E-11 77.5 2.2 49 453-502 320-372 (374)
144 COG5243 HRD1 HRD ubiquitin lig 97.9 4.3E-06 9.4E-11 79.6 2.3 45 456-501 287-344 (491)
145 PF04564 U-box: U-box domain; 97.8 1.7E-05 3.6E-10 59.9 3.7 48 455-503 3-51 (73)
146 KOG0824 Predicted E3 ubiquitin 97.8 6.2E-06 1.4E-10 76.7 1.5 48 457-505 8-56 (324)
147 KOG4628 Predicted E3 ubiquitin 97.8 1.5E-05 3.3E-10 77.2 3.1 46 457-503 230-279 (348)
148 KOG4692 Predicted E3 ubiquitin 97.7 2E-05 4.4E-10 74.5 2.4 51 454-505 420-470 (489)
149 KOG1785 Tyrosine kinase negati 97.6 3.2E-05 6.9E-10 74.4 1.8 48 457-505 370-419 (563)
150 KOG2177 Predicted E3 ubiquitin 97.5 4.2E-05 9.1E-10 76.2 1.6 45 454-499 11-55 (386)
151 PF14835 zf-RING_6: zf-RING of 97.4 2.2E-05 4.8E-10 55.8 -1.1 43 457-502 8-51 (65)
152 COG5236 Uncharacterized conser 97.4 0.00016 3.4E-09 68.4 4.1 56 448-504 53-110 (493)
153 PF12861 zf-Apc11: Anaphase-pr 97.3 0.00018 4E-09 54.7 3.2 33 469-502 47-82 (85)
154 KOG4159 Predicted E3 ubiquitin 97.2 0.00016 3.4E-09 72.3 2.6 49 454-503 82-130 (398)
155 KOG0802 E3 ubiquitin ligase [P 97.2 0.00013 2.9E-09 77.4 1.7 47 455-502 290-341 (543)
156 PF14447 Prok-RING_4: Prokaryo 97.2 0.00014 2.9E-09 50.1 0.8 44 457-503 8-51 (55)
157 KOG1039 Predicted E3 ubiquitin 97.1 0.00024 5.3E-09 69.5 1.8 50 455-505 160-224 (344)
158 KOG0311 Predicted E3 ubiquitin 97.0 8.6E-05 1.9E-09 70.8 -1.5 50 455-505 42-93 (381)
159 KOG2505 Ankyrin repeat protein 96.9 0.0021 4.5E-08 64.3 6.3 67 62-128 402-472 (591)
160 KOG2879 Predicted E3 ubiquitin 96.8 0.0011 2.4E-08 61.2 3.7 46 456-502 239-287 (298)
161 PF14570 zf-RING_4: RING/Ubox 96.8 0.00078 1.7E-08 45.3 1.8 42 459-501 1-47 (48)
162 smart00248 ANK ankyrin repeats 96.7 0.0023 5E-08 37.5 3.6 27 50-77 2-28 (30)
163 smart00248 ANK ankyrin repeats 96.7 0.003 6.6E-08 37.0 4.0 27 86-112 2-28 (30)
164 COG5152 Uncharacterized conser 96.6 0.00088 1.9E-08 58.5 1.2 47 457-504 197-243 (259)
165 KOG2505 Ankyrin repeat protein 96.5 0.0045 9.8E-08 62.0 5.5 62 30-94 404-471 (591)
166 TIGR00570 cdk7 CDK-activating 96.4 0.0026 5.6E-08 61.0 3.4 30 473-503 25-55 (309)
167 KOG1813 Predicted E3 ubiquitin 96.4 0.0012 2.5E-08 61.8 0.7 47 457-504 242-288 (313)
168 COG5175 MOT2 Transcriptional r 96.2 0.0024 5.3E-08 60.4 2.2 48 455-503 13-65 (480)
169 KOG1734 Predicted RING-contain 96.2 0.0019 4.2E-08 59.3 1.1 45 457-502 225-281 (328)
170 KOG0825 PHD Zn-finger protein 96.1 0.0046 1E-07 64.9 3.4 52 455-507 122-176 (1134)
171 PF07800 DUF1644: Protein of u 95.9 0.0078 1.7E-07 51.2 3.5 51 457-507 3-96 (162)
172 KOG3039 Uncharacterized conser 95.9 0.0073 1.6E-07 54.9 3.2 48 455-503 220-271 (303)
173 smart00744 RINGv The RING-vari 95.9 0.0075 1.6E-07 41.4 2.6 40 458-498 1-49 (49)
174 KOG0828 Predicted E3 ubiquitin 95.8 0.0038 8.2E-08 62.3 1.3 46 456-502 571-634 (636)
175 KOG0804 Cytoplasmic Zn-finger 95.7 0.0078 1.7E-07 59.6 2.9 41 457-500 176-220 (493)
176 PF04641 Rtf2: Rtf2 RING-finge 95.4 0.015 3.2E-07 55.7 3.8 52 454-507 111-168 (260)
177 PF03854 zf-P11: P-11 zinc fin 95.4 0.01 2.3E-07 39.2 1.8 46 458-506 4-50 (50)
178 KOG3002 Zn finger protein [Gen 95.4 0.0085 1.8E-07 57.9 2.0 45 454-503 46-92 (299)
179 KOG0297 TNF receptor-associate 95.1 0.0081 1.8E-07 61.0 1.0 49 455-504 20-69 (391)
180 KOG2660 Locus-specific chromos 94.6 0.0087 1.9E-07 57.2 -0.1 50 457-507 16-66 (331)
181 KOG0826 Predicted E3 ubiquitin 94.6 0.017 3.8E-07 54.9 1.8 54 455-509 299-355 (357)
182 PF06128 Shigella_OspC: Shigel 94.6 0.28 6E-06 44.7 9.2 45 21-73 157-201 (284)
183 PF03158 DUF249: Multigene fam 94.6 0.3 6.4E-06 43.2 9.1 138 19-176 48-191 (192)
184 COG5194 APC11 Component of SCF 94.2 0.046 1E-06 40.6 2.8 33 469-502 49-81 (88)
185 KOG1002 Nucleotide excision re 94.1 0.019 4.2E-07 57.8 1.0 50 452-502 532-586 (791)
186 KOG1001 Helicase-like transcri 94.1 0.022 4.8E-07 61.5 1.4 44 457-502 455-500 (674)
187 KOG1814 Predicted E3 ubiquitin 93.8 0.034 7.3E-07 54.7 1.9 31 457-488 185-218 (445)
188 PF06128 Shigella_OspC: Shigel 93.7 0.24 5.2E-06 45.1 6.9 95 85-181 178-280 (284)
189 PF11793 FANCL_C: FANCL C-term 93.6 0.017 3.7E-07 43.0 -0.4 45 457-502 3-66 (70)
190 PF11789 zf-Nse: Zinc-finger o 93.6 0.072 1.6E-06 37.8 2.8 39 457-496 12-53 (57)
191 KOG3579 Predicted E3 ubiquitin 93.3 0.17 3.6E-06 47.3 5.5 32 457-489 269-304 (352)
192 COG5219 Uncharacterized conser 93.2 0.038 8.3E-07 59.6 1.4 48 454-502 1467-1523(1525)
193 PF05290 Baculo_IE-1: Baculovi 92.6 0.07 1.5E-06 44.0 1.8 47 457-504 81-134 (140)
194 KOG2932 E3 ubiquitin ligase in 92.5 0.027 5.8E-07 53.0 -0.8 43 457-503 91-135 (389)
195 KOG1428 Inhibitor of type V ad 92.0 0.089 1.9E-06 59.2 2.2 49 454-503 3484-3545(3738)
196 COG5220 TFB3 Cdk activating ki 91.6 0.076 1.6E-06 48.2 1.0 43 456-499 10-61 (314)
197 PF05883 Baculo_RING: Baculovi 91.1 0.12 2.7E-06 43.1 1.7 32 457-489 27-67 (134)
198 KOG2113 Predicted RNA binding 89.7 0.27 5.8E-06 46.6 2.8 50 456-507 343-392 (394)
199 PF11929 DUF3447: Domain of un 89.0 0.98 2.1E-05 34.1 5.0 48 18-73 7-54 (76)
200 KOG2930 SCF ubiquitin ligase, 88.9 0.27 5.8E-06 38.6 1.8 31 469-500 76-106 (114)
201 PF10272 Tmpp129: Putative tra 88.7 0.47 1E-05 47.0 3.9 28 474-502 311-351 (358)
202 PHA02825 LAP/PHD finger-like p 87.6 0.52 1.1E-05 40.5 2.9 47 455-502 7-59 (162)
203 KOG1493 Anaphase-promoting com 87.6 0.18 3.9E-06 37.1 0.2 28 473-501 50-80 (84)
204 PF03158 DUF249: Multigene fam 87.4 3.3 7.2E-05 36.7 7.8 113 16-140 75-191 (192)
205 PHA02862 5L protein; Provision 87.3 0.5 1.1E-05 39.7 2.6 45 457-502 3-53 (156)
206 KOG2817 Predicted E3 ubiquitin 86.9 0.41 8.9E-06 47.3 2.2 40 469-509 350-394 (394)
207 PF04710 Pellino: Pellino; In 86.3 0.22 4.7E-06 49.1 0.0 54 455-509 327-411 (416)
208 COG5222 Uncharacterized conser 86.2 0.38 8.2E-06 45.2 1.5 42 457-499 275-318 (427)
209 PF10367 Vps39_2: Vacuolar sor 86.0 0.29 6.2E-06 39.8 0.6 31 455-486 77-109 (109)
210 PHA03096 p28-like protein; Pro 85.7 0.46 9.9E-06 45.8 1.9 44 457-501 179-236 (284)
211 KOG3161 Predicted E3 ubiquitin 82.2 0.62 1.3E-05 48.6 1.2 36 457-495 12-51 (861)
212 PF11929 DUF3447: Domain of un 81.2 2.7 5.9E-05 31.7 4.2 46 53-108 9-54 (76)
213 KOG4445 Uncharacterized conser 81.0 0.68 1.5E-05 43.8 0.9 45 457-502 116-186 (368)
214 KOG2113 Predicted RNA binding 80.1 0.49 1.1E-05 45.0 -0.3 52 456-507 136-188 (394)
215 KOG1941 Acetylcholine receptor 79.7 0.56 1.2E-05 45.9 -0.1 47 455-502 364-416 (518)
216 KOG4217 Nuclear receptors of t 78.6 9.1 0.0002 38.8 7.8 30 453-488 266-297 (605)
217 KOG3842 Adaptor protein Pellin 75.8 2.4 5.2E-05 40.4 2.9 49 454-503 339-415 (429)
218 KOG4362 Transcriptional regula 75.2 0.83 1.8E-05 48.8 -0.3 47 456-503 21-70 (684)
219 PF12906 RINGv: RING-variant d 74.3 1.3 2.9E-05 29.9 0.6 39 459-497 1-47 (47)
220 KOG0298 DEAD box-containing he 73.7 1 2.2E-05 51.1 -0.2 44 457-501 1154-1198(1394)
221 KOG0827 Predicted E3 ubiquitin 72.7 2.5 5.5E-05 41.6 2.3 28 473-501 25-55 (465)
222 KOG2068 MOT2 transcription fac 72.0 2.3 5.1E-05 41.2 1.8 46 457-503 250-299 (327)
223 KOG4185 Predicted E3 ubiquitin 71.8 2.4 5.3E-05 41.4 2.0 31 470-501 23-54 (296)
224 PF04216 FdhE: Protein involve 71.2 1.1 2.5E-05 43.6 -0.4 51 457-508 173-228 (290)
225 KOG2114 Vacuolar assembly/sort 69.8 1.3 2.7E-05 48.1 -0.5 43 457-503 841-884 (933)
226 KOG1940 Zn-finger protein [Gen 67.7 1.7 3.6E-05 41.5 -0.1 46 457-504 159-208 (276)
227 PF08746 zf-RING-like: RING-li 67.5 6.5 0.00014 26.0 2.7 38 459-497 1-43 (43)
228 PF02891 zf-MIZ: MIZ/SP-RING z 67.4 3.1 6.7E-05 28.6 1.2 43 457-500 3-50 (50)
229 PRK03564 formate dehydrogenase 67.2 2.5 5.4E-05 41.2 1.0 44 456-499 187-234 (309)
230 KOG3799 Rab3 effector RIM1 and 66.5 2.8 6E-05 34.7 0.9 28 454-487 63-91 (169)
231 TIGR01562 FdhE formate dehydro 65.2 1.9 4.1E-05 42.0 -0.2 44 457-500 185-233 (305)
232 KOG1952 Transcription factor N 64.6 3.1 6.8E-05 45.2 1.2 46 454-500 189-245 (950)
233 KOG3113 Uncharacterized conser 64.0 10 0.00022 35.2 4.1 45 456-503 111-159 (293)
234 KOG4218 Nuclear hormone recept 63.1 4.5 9.8E-05 39.1 1.8 31 453-487 12-42 (475)
235 KOG3899 Uncharacterized conser 63.1 4.2 9.1E-05 38.4 1.6 28 474-502 325-365 (381)
236 COG5183 SSM4 Protein involved 62.0 6.5 0.00014 42.5 2.9 53 455-508 11-71 (1175)
237 KOG3053 Uncharacterized conser 61.1 4.8 0.0001 37.4 1.5 51 452-503 16-83 (293)
238 cd00350 rubredoxin_like Rubred 54.0 5.1 0.00011 24.7 0.4 15 492-506 18-32 (33)
239 KOG3842 Adaptor protein Pellin 53.8 6.7 0.00014 37.5 1.2 43 464-507 312-356 (429)
240 PF04423 Rad50_zn_hook: Rad50 53.6 5.6 0.00012 27.7 0.6 17 487-503 16-32 (54)
241 KOG3039 Uncharacterized conser 53.5 9.7 0.00021 35.2 2.2 33 454-487 41-73 (303)
242 PF13240 zinc_ribbon_2: zinc-r 51.2 2.6 5.5E-05 23.7 -1.2 22 480-501 2-23 (23)
243 PF14569 zf-UDP: Zinc-binding 50.2 13 0.00029 27.8 2.0 47 456-503 9-63 (80)
244 KOG3970 Predicted E3 ubiquitin 48.0 15 0.00032 33.5 2.4 45 457-502 51-105 (299)
245 KOG0513 Ca2+-independent phosp 47.7 2.4 5.2E-05 44.4 -3.0 140 11-168 49-206 (503)
246 KOG1812 Predicted E3 ubiquitin 47.6 7.6 0.00017 39.4 0.7 32 457-489 147-182 (384)
247 PF04710 Pellino: Pellino; In 46.0 6.8 0.00015 39.0 0.0 41 466-507 301-343 (416)
248 KOG1645 RING-finger-containing 45.3 11 0.00024 37.6 1.3 33 469-502 22-56 (463)
249 KOG1815 Predicted E3 ubiquitin 45.1 13 0.00028 38.7 1.9 32 457-489 71-103 (444)
250 COG5109 Uncharacterized conser 43.4 16 0.00035 35.1 2.0 51 457-508 337-395 (396)
251 cd00729 rubredoxin_SM Rubredox 43.4 9.1 0.0002 23.8 0.3 15 492-506 19-33 (34)
252 PF10571 UPF0547: Uncharacteri 37.5 6.2 0.00014 22.9 -1.0 18 481-498 4-21 (26)
253 PF10083 DUF2321: Uncharacteri 37.5 18 0.00039 31.1 1.3 26 475-504 27-52 (158)
254 PF07975 C1_4: TFIIH C1-like d 36.8 24 0.00051 24.4 1.5 25 473-498 26-50 (51)
255 PF10764 Gin: Inhibitor of sig 36.7 30 0.00066 23.2 2.0 31 458-490 1-31 (46)
256 KOG3268 Predicted E3 ubiquitin 35.6 25 0.00054 30.8 1.9 47 455-502 164-228 (234)
257 KOG0825 PHD Zn-finger protein 35.1 63 0.0014 35.3 5.0 46 457-503 100-155 (1134)
258 KOG3576 Ovo and related transc 33.0 40 0.00087 30.4 2.7 16 452-467 113-128 (267)
259 PF05605 zf-Di19: Drought indu 32.5 16 0.00034 25.4 0.1 38 457-502 3-42 (54)
260 PF13248 zf-ribbon_3: zinc-rib 30.9 9 0.0002 22.2 -1.1 21 480-500 5-25 (26)
261 PF02318 FYVE_2: FYVE-type zin 29.6 7.1 0.00015 32.3 -2.4 45 455-500 53-103 (118)
262 PF07191 zinc-ribbons_6: zinc- 29.4 4.1 9E-05 30.0 -3.3 40 457-502 2-41 (70)
263 KOG3836 HLH transcription fact 29.0 13 0.00029 39.1 -1.0 47 96-142 406-452 (605)
264 KOG2807 RNA polymerase II tran 29.0 27 0.00059 33.8 1.1 41 457-498 331-374 (378)
265 KOG2034 Vacuolar sorting prote 28.9 27 0.00059 38.6 1.2 31 457-488 818-850 (911)
266 COG4306 Uncharacterized protei 28.8 30 0.00065 28.4 1.2 22 480-504 31-52 (160)
267 KOG3836 HLH transcription fact 27.6 14 0.0003 39.0 -1.2 62 57-121 403-464 (605)
268 KOG0801 Predicted E3 ubiquitin 26.9 27 0.00058 30.1 0.6 22 454-475 175-199 (205)
269 COG1592 Rubrerythrin [Energy p 26.8 23 0.00049 31.2 0.2 15 492-506 150-164 (166)
270 COG1379 PHP family phosphoeste 26.8 21 0.00046 34.6 -0.0 46 458-504 228-278 (403)
271 cd00730 rubredoxin Rubredoxin; 25.5 28 0.00061 23.9 0.4 14 493-506 36-49 (50)
272 PLN02436 cellulose synthase A 25.1 44 0.00095 38.2 2.0 45 457-502 37-89 (1094)
273 PF09788 Tmemb_55A: Transmembr 24.7 2.7E+02 0.0059 26.3 6.7 40 457-501 86-135 (256)
274 PLN02189 cellulose synthase 24.7 46 0.00099 37.9 2.1 45 457-502 35-87 (1040)
275 PRK01343 zinc-binding protein; 24.6 30 0.00066 24.4 0.4 11 493-503 11-21 (57)
276 KOG4451 Uncharacterized conser 24.4 46 0.001 30.5 1.6 23 480-502 252-274 (286)
277 PF14311 DUF4379: Domain of un 24.1 44 0.00095 23.2 1.2 23 473-497 33-55 (55)
278 PF10217 DUF2039: Uncharacteri 23.5 36 0.00077 26.7 0.7 34 458-500 57-90 (92)
279 KOG1709 Guanidinoacetate methy 23.3 66 0.0014 29.7 2.4 40 70-111 1-40 (271)
280 COG2093 DNA-directed RNA polym 22.8 28 0.0006 24.9 -0.0 22 479-500 6-27 (64)
281 smart00290 ZnF_UBP Ubiquitin C 22.2 56 0.0012 21.9 1.4 21 459-480 2-22 (50)
282 PF06906 DUF1272: Protein of u 22.0 66 0.0014 22.5 1.6 22 480-503 32-53 (57)
283 KOG1812 Predicted E3 ubiquitin 21.5 50 0.0011 33.6 1.5 40 457-497 307-351 (384)
284 KOG4335 FERM domain-containing 21.4 71 0.0015 33.1 2.4 70 56-127 149-219 (558)
285 KOG0513 Ca2+-independent phosp 21.0 2.1 4.5E-05 44.8 -8.6 99 36-146 122-220 (503)
286 KOG1709 Guanidinoacetate methy 20.5 78 0.0017 29.2 2.3 41 36-77 1-41 (271)
287 PHA02610 uvsY.-2 hypothetical 20.4 50 0.0011 22.6 0.8 15 493-507 3-17 (53)
288 COG4416 Com Mu-like prophage p 20.4 60 0.0013 22.4 1.2 21 479-499 6-32 (60)
289 COG4647 AcxC Acetone carboxyla 20.2 58 0.0013 26.9 1.3 24 458-482 59-82 (165)
290 KOG4846 Nuclear receptor [Sign 20.1 5.3E+02 0.012 26.3 8.0 14 454-467 130-143 (538)
291 KOG0309 Conserved WD40 repeat- 20.0 62 0.0013 35.2 1.8 38 458-496 1030-1069(1081)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-37 Score=258.08 Aligned_cols=172 Identities=26% Similarity=0.250 Sum_probs=163.3
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHc-CCCccccCCCCCCChHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLH 91 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~-ga~~n~~~~d~~g~TpLh 91 (510)
|.+|+|||||||..|+.++|++|++ .+..+|.+|..|+||||+||.. |+.++|+.|+.. |+|+|+. +..|.|+||
T Consensus 35 dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~-g~~evVk~Ll~r~~advna~--tn~G~T~LH 111 (226)
T KOG4412|consen 35 DQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN-GNDEVVKELLNRSGADVNAT--TNGGQTCLH 111 (226)
T ss_pred cccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc-CcHHHHHHHhcCCCCCccee--cCCCcceeh
Confidence 4599999999999999999999995 6788899999999999999997 899999999988 9999999 899999999
Q ss_pred HHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHH
Q 010439 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIW 171 (510)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~ 171 (510)
||+..|..+|+++|+++|+.++++|..|.||||-|+..|..+++++|+..|+.+| .+|+.|+|||| .|...++.+..
T Consensus 112 yAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n--~qDk~G~TpL~-~al~e~~~d~a 188 (226)
T KOG4412|consen 112 YAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLN--TQDKYGFTPLH-HALAEGHPDVA 188 (226)
T ss_pred hhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCC--cccccCccHHH-HHHhccCchHH
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999 88888999999
Q ss_pred HHHhhCCCCCCCCCccccccc
Q 010439 172 VVVIPCGTANPSKPLRFELVI 192 (510)
Q Consensus 172 ~~Ll~~ga~~~~~~~~~~~~l 192 (510)
.+|+++|++.+..|.++ +++
T Consensus 189 ~lLV~~gAd~~~edke~-t~~ 208 (226)
T KOG4412|consen 189 VLLVRAGADTDREDKEG-TAL 208 (226)
T ss_pred HHHHHhccceeeccccC-chH
Confidence 99999999999988766 553
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-34 Score=241.77 Aligned_cols=206 Identities=21% Similarity=0.223 Sum_probs=184.9
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCC-CCcccCC-CCChHHHHHHHhCCcHHHHHHHH-HcCCCccccCCCCCCChHHHHH
Q 010439 17 KDELLYQWVIAGDVDAIRALRSQGA-SLEWMDK-EGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRGGTPLHHA 93 (510)
Q Consensus 17 g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~-~g~TpL~~A~~~~~~~~~v~~Ll-~~ga~~n~~~~d~~g~TpLh~A 93 (510)
+.++.+.+++.....-|+.|++... .++.++. +|+||||+||.. |+.+++.+|+ +.+..+|.+ |..||||||+|
T Consensus 3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~-g~~eiv~fLlsq~nv~~ddk--DdaGWtPlhia 79 (226)
T KOG4412|consen 3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSF-GHVEIVYFLLSQPNVKPDDK--DDAGWTPLHIA 79 (226)
T ss_pred ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeec-CchhHHHHHHhcCCCCCCCc--cccCCchhhhh
Confidence 4678888888888889999998766 6788776 999999999998 9999999999 556777766 89999999999
Q ss_pred HHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHH
Q 010439 94 AKRGLEPTVRLLLSC-GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (510)
Q Consensus 94 ~~~g~~~~v~~Ll~~-gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~ 172 (510)
+..|+.++|+.|+.+ |+|+|..++.|.|+||||+.+|+.+|+++|+++|+.++ ++|..|.|||| -|+..|..++++
T Consensus 80 ~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~--~kD~~~qtplH-RAAavGklkvie 156 (226)
T KOG4412|consen 80 ASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIR--IKDKQGQTPLH-RAAAVGKLKVIE 156 (226)
T ss_pred hhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCc--ccccccCchhH-HHHhccchhhHH
Confidence 999999999999998 99999999999999999999999999999999999999 99999999999 899999999999
Q ss_pred HHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehh
Q 010439 173 VVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (510)
Q Consensus 173 ~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~ 239 (510)
+|+..|+.+|.+|..|.+|++.+.-++++.....|... +++ +.+.|+.| |++..+.
T Consensus 157 ~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~--------gAd--~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 157 YLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRA--------GAD--TDREDKEG-TALRIAC 212 (226)
T ss_pred HHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHh--------ccc--eeeccccC-chHHHHH
Confidence 99999999999999999999999888887776654443 445 78888877 8876654
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=269.43 Aligned_cols=205 Identities=15% Similarity=0.143 Sum_probs=182.2
Q ss_pred hhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHH
Q 010439 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPL 90 (510)
Q Consensus 11 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpL 90 (510)
+.+|.+|+||||+|+..|+.++|++|+++|++++..+ |.||||+|+.. |+.+++++|+++|++++.+ |..|+|||
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~~TpLh~Aa~~-g~~eiV~lLL~~Gadvn~~--d~~G~TpL 98 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATL-EDTKIVKILLFSGMDDSQF--DDKGNTAL 98 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--CCCHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCCCHH
Confidence 4678999999999999999999999999999998764 79999999997 9999999999999999998 89999999
Q ss_pred HHHHHcCCHHHHHHHHHCCCCCccCCCCCC-cHHHHHHHcCCHHHHHHHHhccccccccccc-cCCCCHHHHHhhhcCCH
Q 010439 91 HHAAKRGLEPTVRLLLSCGANALVRNDDCH-TALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQLMSR 168 (510)
Q Consensus 91 h~A~~~g~~~~v~~Ll~~gad~~~~d~~g~-TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d-~~g~t~L~~~A~~~~~~ 168 (510)
|+|+..|+.+++++|+++|++++.++..|+ ||||+|+..|+.++|++|++++.+.. | ..|.|||| +|+..|+.
T Consensus 99 h~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~----d~~~g~TpLh-~Aa~~g~~ 173 (284)
T PHA02791 99 YYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF----DLAILLSCIH-ITIKNGHV 173 (284)
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc----ccccCccHHH-HHHHcCCH
Confidence 999999999999999999999999999885 89999999999999999999976542 3 35899999 99999999
Q ss_pred HHHHHHhhCCCCCCCCCcccccc-ccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceee
Q 010439 169 KIWVVVIPCGTANPSKPLRFELV-IYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYK 236 (510)
Q Consensus 169 ~~~~~Ll~~ga~~~~~~~~~~~~-l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~ 236 (510)
+++++|+++|++++.++..+.++ ++.++..++...+..|+. .|++ ++.+|.. .++|.
T Consensus 174 eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~--------~Ga~--in~~~~~-~~~l~ 231 (284)
T PHA02791 174 DMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFK--------YDIN--IYSVNLE-NVLLD 231 (284)
T ss_pred HHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHH--------CCCC--CccCccc-CccCC
Confidence 99999999999999999888877 899999999777765443 3556 6777773 35553
No 4
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.98 E-value=2.1e-31 Score=279.19 Aligned_cols=209 Identities=21% Similarity=0.189 Sum_probs=185.7
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCc------------------------------
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL------------------------------ 63 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~------------------------------ 63 (510)
+..+.||||+|+..|+.++|++|+++|+++|.+|..|.||||+||.. |+
T Consensus 34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~ 112 (477)
T PHA02878 34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKE-PNKLGMKEMIRSINKCSVFYTLVAIKDAFNNR 112 (477)
T ss_pred cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC-ccHhHHHHHHHHHhccccccchhhHHHHHHcC
Confidence 45688999999999999999999999999999999999999999975 32
Q ss_pred ----------------------------------HHHHHHHHHcCCCccccCCCCC-CChHHHHHHHcCCHHHHHHHHHC
Q 010439 64 ----------------------------------INVAKTLIELGANINAYRPGGR-GGTPLHHAAKRGLEPTVRLLLSC 108 (510)
Q Consensus 64 ----------------------------------~~~v~~Ll~~ga~~n~~~~d~~-g~TpLh~A~~~g~~~~v~~Ll~~ 108 (510)
.+++++|+++|++++.. +.. |+||||+|+..|+.+++++|+++
T Consensus 113 ~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~--~~~~g~tpLh~A~~~~~~~iv~~Ll~~ 190 (477)
T PHA02878 113 NVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMK--DRHKGNTALHYATENKDQRLTELLLSY 190 (477)
T ss_pred CHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCcc--CCCCCCCHHHHHHhCCCHHHHHHHHHC
Confidence 23778888899999998 777 99999999999999999999999
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhc-CCHHHHHHHhhCCCCCCCCCc-
Q 010439 109 GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL-MSRKIWVVVIPCGTANPSKPL- 186 (510)
Q Consensus 109 gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~-~~~~~~~~Ll~~ga~~~~~~~- 186 (510)
|++++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+.. ++.+++++|+++|++++.++.
T Consensus 191 gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in--~~d~~g~TpLh-~A~~~~~~~~iv~~Ll~~gadvn~~~~~ 267 (477)
T PHA02878 191 GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTD--ARDKCGNTPLH-ISVGYCKDYDILKLLLEHGVDVNAKSYI 267 (477)
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-HHHHhcCCHHHHHHHHHcCCCCCccCCC
Confidence 99999999999999999999999999999999999999 89999999999 78764 789999999999999998875
Q ss_pred cccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhc
Q 010439 187 RFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (510)
Q Consensus 187 ~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~ 240 (510)
.+.+|++.+.. ....+.. +...+++ +++.|..|.|||++|+.
T Consensus 268 ~g~TpLh~A~~--~~~~v~~--------Ll~~gad--in~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 268 LGLTALHSSIK--SERKLKL--------LLEYGAD--INSLNSYKLTPLSSAVK 309 (477)
T ss_pred CCCCHHHHHcc--CHHHHHH--------HHHCCCC--CCCcCCCCCCHHHHHHH
Confidence 78999999943 3333332 2345667 88899999999999985
No 5
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.98 E-value=3.4e-31 Score=274.45 Aligned_cols=215 Identities=17% Similarity=0.192 Sum_probs=192.8
Q ss_pred hhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCC-------------
Q 010439 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN------------- 76 (510)
Q Consensus 10 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~------------- 76 (510)
.+..+..|.||||+|+..|+.++|++|+++|+++|..+..|.||||+|+.. |+.+++++|+++|++
T Consensus 28 ~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~-~~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 106 (434)
T PHA02874 28 INISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKI-GAHDIIKLLIDNGVDTSILPIPCIEKDM 106 (434)
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCCCcchhccCCHHH
Confidence 456678899999999999999999999999999999999999999999997 999999999887654
Q ss_pred ----------ccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 77 ----------INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 77 ----------~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
++.+ +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus 107 i~~ll~~g~d~n~~--~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n 184 (434)
T PHA02874 107 IKTILDCGIDVNIK--DAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN 184 (434)
T ss_pred HHHHHHCcCCCCCC--CCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC
Confidence 5555 7899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEE
Q 010439 147 GWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTI 226 (510)
Q Consensus 147 ~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~ 226 (510)
.++..|.|||| +|+..++.+++++|+++|++++.++..+.++++.+...... .+..+. .+.+ ++.
T Consensus 185 --~~~~~g~tpL~-~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~-~i~~Ll---------~~~~--in~ 249 (434)
T PHA02874 185 --VKDNNGESPLH-NAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRS-AIELLI---------NNAS--IND 249 (434)
T ss_pred --CCCCCCCCHHH-HHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChH-HHHHHH---------cCCC--CCC
Confidence 89999999999 99999999999999999999999999999999999876542 222111 2344 677
Q ss_pred ecCCCcceeeehhcCC
Q 010439 227 YDQATKIRYKFASANE 242 (510)
Q Consensus 227 ~d~~~~t~l~~a~~~~ 242 (510)
.|..|.||||+|+...
T Consensus 250 ~d~~G~TpLh~A~~~~ 265 (434)
T PHA02874 250 QDIDGSTPLHHAINPP 265 (434)
T ss_pred cCCCCCCHHHHHHhcC
Confidence 8999999999999654
No 6
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.6e-31 Score=275.45 Aligned_cols=193 Identities=16% Similarity=0.130 Sum_probs=174.4
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC-CcHHHHHHHHHcCCCccccCCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~-~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
.++++|.+|.+|.||||+|+..|+.++|++||++|+++|.+|..|.||||+|+..+ +..+++++|+++|+++|... |.
T Consensus 61 ~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~-d~ 139 (446)
T PHA02946 61 RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSV-DE 139 (446)
T ss_pred CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccccc-CC
Confidence 46788999999999999999999999999999999999999999999999998752 24899999999999999632 78
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC--HHHHHHHHhccccccccccccCCCCHHHHHh
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH--INVVRAIESHICYFCGWLREFYGPSFLEALA 162 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~--~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A 162 (510)
.|.|||| |+..++.+++++|+++|++++.+|..|+||||+|+..++ .+++++|+++|++++ .+|.+|.|||| +|
T Consensus 140 ~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin--~~d~~G~TpLH-~A 215 (446)
T PHA02946 140 EGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPS--KPDHDGNTPLH-IV 215 (446)
T ss_pred CCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCc--ccCCCCCCHHH-HH
Confidence 9999997 667799999999999999999999999999999987654 689999999999999 89999999999 88
Q ss_pred hhcC--CHHHHHHHhhCCCCCCCCCccccccccccccccChHHH
Q 010439 163 PQLM--SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAV 204 (510)
Q Consensus 163 ~~~~--~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i 204 (510)
+..+ +.+++++|+. |++++.++..+.+|++.++...+...+
T Consensus 216 a~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~ 258 (446)
T PHA02946 216 CSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHL 258 (446)
T ss_pred HHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHH
Confidence 8875 7899999885 899999999999999999988775433
No 7
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=1.9e-31 Score=283.27 Aligned_cols=180 Identities=16% Similarity=0.133 Sum_probs=156.7
Q ss_pred cChhhh-cCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCc--HHHHHHHHHcCCCccccCC
Q 010439 8 MNQHQQ-RQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL--INVAKTLIELGANINAYRP 82 (510)
Q Consensus 8 ~~~~~~-~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~--~~~v~~Ll~~ga~~n~~~~ 82 (510)
+++|.+ +..|.||||+|+. .++.++|++|+++|+++|.+|..|.||||+|+.. |+ .++|++|+++|||+|.+
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~-g~~~~eIVklLLe~GADVN~k-- 243 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLIT-GNVCASVIKKIIELGGDMDMK-- 243 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc-CCCCHHHHHHHHHcCCCCCCC--
Confidence 677777 8889999998865 4678999999999999999999999999999987 64 58999999999999988
Q ss_pred CCCCChHHHHH-------------------------------------HHcCCHHHHHHHHHCCCCCccCCCCCCcHHHH
Q 010439 83 GGRGGTPLHHA-------------------------------------AKRGLEPTVRLLLSCGANALVRNDDCHTALGV 125 (510)
Q Consensus 83 d~~g~TpLh~A-------------------------------------~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~ 125 (510)
|..|+||||+| +..|+.+++++|+++|++++.+|..|+||||+
T Consensus 244 D~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~ 323 (764)
T PHA02716 244 CVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQ 323 (764)
T ss_pred CCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHH
Confidence 88999999864 45699999999999999999999999999998
Q ss_pred HHH--cCCHHHHHHHHhccccccccccccCCCCHHHHHhhh--------------cCCHHHHHHHhhCCCCCCCCCcccc
Q 010439 126 ARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ--------------LMSRKIWVVVIPCGTANPSKPLRFE 189 (510)
Q Consensus 126 A~~--~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~--------------~~~~~~~~~Ll~~ga~~~~~~~~~~ 189 (510)
|+. .++.+++++|+++|++++ .+|..|.|||| +|+. .++.+++++|+++|++++.++..|.
T Consensus 324 Aaa~~~~~~eIVklLLe~GADIN--~kD~~G~TPLH-~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~ 400 (764)
T PHA02716 324 YILRHNISTDIIKLLHEYGNDLN--EPDNIGNTVLH-TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGY 400 (764)
T ss_pred HHHHhCCCchHHHHHHHcCCCCc--cCCCCCCCHHH-HHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCC
Confidence 765 457899999999999998 88999999999 6643 3678999999999999999999999
Q ss_pred cccc
Q 010439 190 LVIY 193 (510)
Q Consensus 190 ~~l~ 193 (510)
+|++
T Consensus 401 TPLh 404 (764)
T PHA02716 401 TPLT 404 (764)
T ss_pred ChHH
Confidence 9987
No 8
>PHA02791 ankyrin-like protein; Provisional
Probab=99.97 E-value=7.4e-31 Score=252.55 Aligned_cols=164 Identities=16% Similarity=0.103 Sum_probs=153.3
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCC-hHHHHHH
Q 010439 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG-TPLHHAA 94 (510)
Q Consensus 16 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~-TpLh~A~ 94 (510)
+|.||||+|+..|+.++|++|+++|++++.+|..|+||||+|+.. |+.+++++|+++|++++.+ +..|+ ||||+|+
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~-g~~eivk~Ll~~gadin~~--~~~g~~TpL~~Aa 136 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS-GNMQTVKLFVKKNWRLMFY--GKTGWKTSFYHAV 136 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHCCCCcCcc--CCCCCcHHHHHHH
Confidence 478999999999999999999999999999999999999999998 9999999999999999988 77775 9999999
Q ss_pred HcCCHHHHHHHHHCCCCCccCC-CCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCH-HHHHhhhcCCHHHHH
Q 010439 95 KRGLEPTVRLLLSCGANALVRN-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSF-LEALAPQLMSRKIWV 172 (510)
Q Consensus 95 ~~g~~~~v~~Ll~~gad~~~~d-~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~-L~~~A~~~~~~~~~~ 172 (510)
..|+.++|++|++++.+. .| ..|.||||+|+.+|+.+++++|+++|++++ .+|..|.|| || +|+..++.++++
T Consensus 137 ~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n--~~d~~g~t~~L~-~Aa~~~~~e~v~ 211 (284)
T PHA02791 137 MLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN--TNNSLLFIPDIK-LAIDNKDLEMLQ 211 (284)
T ss_pred HcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC--cccCCCCChHHH-HHHHcCCHHHHH
Confidence 999999999999987543 33 358999999999999999999999999999 899999987 99 999999999999
Q ss_pred HHhhCCCCCCCCCcc
Q 010439 173 VVIPCGTANPSKPLR 187 (510)
Q Consensus 173 ~Ll~~ga~~~~~~~~ 187 (510)
+|+++|++++.++..
T Consensus 212 lLl~~Ga~in~~~~~ 226 (284)
T PHA02791 212 ALFKYDINIYSVNLE 226 (284)
T ss_pred HHHHCCCCCccCccc
Confidence 999999999999864
No 9
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.97 E-value=7.6e-31 Score=278.60 Aligned_cols=174 Identities=18% Similarity=0.183 Sum_probs=154.1
Q ss_pred cccChhhhcCCchHHHHHHHHcCC--HHHHHHHHHcCCCCcccCCCCChHHHHHH-------------------------
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGD--VDAIRALRSQGASLEWMDKEGKTPLIVAC------------------------- 58 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~--~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~------------------------- 58 (510)
++++++.+|..|.||||+|+..|+ .++|++||++|+++|.+|..|+||||+|+
T Consensus 201 ~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~ 280 (764)
T PHA02716 201 NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKN 280 (764)
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccccc
Confidence 467889999999999999999995 59999999999999999999999999763
Q ss_pred ------------HhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHH--cCCHHHHHHHHHCCCCCccCCCCCCcHHH
Q 010439 59 ------------MDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAK--RGLEPTVRLLLSCGANALVRNDDCHTALG 124 (510)
Q Consensus 59 ------------~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~--~g~~~~v~~Ll~~gad~~~~d~~g~TpL~ 124 (510)
.. |+.+++++|+++|++++.+ |..|+||||+|+. .++.+++++|+++|++++.+|..|+||||
T Consensus 281 ~~~~L~~~i~AA~~-g~leiVklLLe~GAdIN~k--D~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH 357 (764)
T PHA02716 281 IPMILHSYITLARN-IDISVVYSFLQPGVKLHYK--DSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLH 357 (764)
T ss_pred chhhhHHHHHHHHc-CCHHHHHHHHhCCCceecc--CCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHH
Confidence 33 7789999999999999998 8999999999875 46899999999999999999999999999
Q ss_pred HHHH--------------cCCHHHHHHHHhccccccccccccCCCCHHHHH---hhhcCCHHHHHHHhhCCCCCCCC
Q 010439 125 VARI--------------KGHINVVRAIESHICYFCGWLREFYGPSFLEAL---APQLMSRKIWVVVIPCGTANPSK 184 (510)
Q Consensus 125 ~A~~--------------~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~---A~~~~~~~~~~~Ll~~ga~~~~~ 184 (510)
+|+. .++.+++++|+++|++++ .+|..|.||||.+ |...++.+++++|++.|+....+
T Consensus 358 ~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn--~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~ 432 (764)
T PHA02716 358 TYLSMLSVVNILDPETDNDIRLDVIQCLISLGADIT--AVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVK 432 (764)
T ss_pred HHHHhhhhhccccccccccChHHHHHHHHHCCCCCC--CcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhh
Confidence 9875 368999999999999999 8999999999932 23357799999999998765433
No 10
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.1e-30 Score=274.84 Aligned_cols=217 Identities=17% Similarity=0.178 Sum_probs=130.0
Q ss_pred ccChhhhcCCchHHHHH-----HHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHH--HhCCcHHHHHHHHHcCCCccc
Q 010439 7 SMNQHQQRQSKDELLYQ-----WVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVAC--MDSGLINVAKTLIELGANINA 79 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~-----A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~--~~~~~~~~v~~Ll~~ga~~n~ 79 (510)
+++++..+..|.||||+ |+..|+.+++++|+++|++++..|..|.||||+|+ .. |+.+++++|+++|++++.
T Consensus 58 g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~-~~~~iv~~Ll~~g~~~~~ 136 (480)
T PHA03100 58 GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKS-NSYSIVEYLLDNGANVNI 136 (480)
T ss_pred CCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhccc-ChHHHHHHHHHcCCCCCc
Confidence 34445555556666666 66666666666666666666666666666666666 54 566666666666666665
Q ss_pred cCCCCCCChHHHHHHHcC--CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCC---
Q 010439 80 YRPGGRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG--- 154 (510)
Q Consensus 80 ~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g--- 154 (510)
. +..|.||||+|+..| +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|
T Consensus 137 ~--~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~~~~~ 212 (480)
T PHA03100 137 K--NSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN--AGDIETLLF 212 (480)
T ss_pred c--CCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc--CCCCCCCcH
Confidence 5 556666666666666 5666666666666666666666666666666666666666666666665 555555
Q ss_pred ---CCHHHHHhhhcCC--HHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecC
Q 010439 155 ---PSFLEALAPQLMS--RKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQ 229 (510)
Q Consensus 155 ---~t~L~~~A~~~~~--~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~ 229 (510)
.|||| .|+..++ .+++++|+++|++++.++..+.+|++.++..++...+..++. .+++ ++..|.
T Consensus 213 ~~~~t~l~-~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~--------~gad--~n~~d~ 281 (480)
T PHA03100 213 TIFETPLH-IAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLD--------LGAN--PNLVNK 281 (480)
T ss_pred HHHHhHHH-HHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH--------cCCC--CCccCC
Confidence 56666 5666666 666666666666666666666666666666555444443222 2334 555666
Q ss_pred CCcceeeehh
Q 010439 230 ATKIRYKFAS 239 (510)
Q Consensus 230 ~~~t~l~~a~ 239 (510)
.|.||+++|.
T Consensus 282 ~g~tpl~~A~ 291 (480)
T PHA03100 282 YGDTPLHIAI 291 (480)
T ss_pred CCCcHHHHHH
Confidence 6666666666
No 11
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=5e-31 Score=264.05 Aligned_cols=209 Identities=25% Similarity=0.242 Sum_probs=189.5
Q ss_pred hHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHc
Q 010439 18 DELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (510)
Q Consensus 18 ~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~ 96 (510)
...++.|++.|+++.||.|++. |.+++..|.+|.|+||+||.+ ++++++++|+++||++|... ..-+.||||||+++
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiN-Nrl~v~r~li~~gadvn~~g-G~l~stPLHWAar~ 122 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAIN-NRLDVARYLISHGADVNAIG-GVLGSTPLHWAARN 122 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHc-CcHHHHHHHHHcCCCccccC-CCCCCCcchHHHHc
Confidence 5778999999999999999998 999999999999999999998 99999999999999999983 37789999999999
Q ss_pred CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhh
Q 010439 97 GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIP 176 (510)
Q Consensus 97 g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~ 176 (510)
|+..+|++|+++|||++.+|.+|.||||+|+..|+.-+|-+|+.+|++++ .+|.+|+|||| +|+.++....+..|+.
T Consensus 123 G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d--~~D~~grTpLm-wAaykg~~~~v~~LL~ 199 (600)
T KOG0509|consen 123 GHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADID--LRDNNGRTPLM-WAAYKGFALFVRRLLK 199 (600)
T ss_pred CcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCC--CcCCCCCCHHH-HHHHhcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999 9999999888999999
Q ss_pred CCCCCCCCC-ccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcC
Q 010439 177 CGTANPSKP-LRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (510)
Q Consensus 177 ~ga~~~~~~-~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~ 241 (510)
.|+.+..+| ..+.+|+|+++..++...+. + +...+++ ....|.+|+||+.+|.+.
T Consensus 200 f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-L-------l~~g~~~--~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 200 FGASLLLTDDNHGNTPLHWAVVGGNLTAVK-L-------LLEGGAD--LDKTNTNGKTPFDLAQER 255 (600)
T ss_pred hcccccccccccCCchHHHHHhcCCcceEe-h-------hhhcCCc--ccccccCCCCHHHHHHHh
Confidence 999999888 89999999999888855544 2 2223345 677788899999999755
No 12
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=1e-30 Score=274.22 Aligned_cols=221 Identities=18% Similarity=0.134 Sum_probs=195.6
Q ss_pred cccChhhhcCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCC-cHHHHHHHHHcCCCccccC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYR 81 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~-~~~~v~~Ll~~ga~~n~~~ 81 (510)
.+++++.++..|.||||+|+..| +.++|++|+++|+++|.+|..|.||||+|+.. + +.+++++|+++|++++.+
T Consensus 36 ~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~-~~~~~iv~lLl~~ga~in~~- 113 (471)
T PHA03095 36 AGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYN-ATTLDVIKLLIKAGADVNAK- 113 (471)
T ss_pred cCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-CCcHHHHHHHHHcCCCCCCC-
Confidence 35778889999999999999998 99999999999999999999999999999998 6 699999999999999998
Q ss_pred CCCCCChHHHHHH--HcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC--CHHHHHHHHhccccccccccccCCCCH
Q 010439 82 PGGRGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSF 157 (510)
Q Consensus 82 ~d~~g~TpLh~A~--~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~~~d~~g~t~ 157 (510)
|..|+||||+|+ ..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++ ..|..|.||
T Consensus 114 -~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~--~~d~~g~t~ 190 (471)
T PHA03095 114 -DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY--AVDDRFRSL 190 (471)
T ss_pred -CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc--ccCCCCCCH
Confidence 889999999999 567899999999999999999999999999999876 6899999999999998 679999999
Q ss_pred HHHHhhh--cCCHHHHHHHhhCCCCCCCCCccccccccccccccChHH-HHHHHHhhcCCCCCCCCCCceEEecCCCcce
Q 010439 158 LEALAPQ--LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRA-VIALWKAKIDEPKFHQPDPSLTIYDQATKIR 234 (510)
Q Consensus 158 L~~~A~~--~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~-i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~ 234 (510)
|| +++. .+..+++++|++.|++++.++..+.+|++.++..+.... +.. .++..+.+ ++..|..|+||
T Consensus 191 Lh-~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~-------~ll~~g~d--in~~d~~g~Tp 260 (471)
T PHA03095 191 LH-HHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVL-------PLLIAGIS--INARNRYGQTP 260 (471)
T ss_pred HH-HHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHH-------HHHHcCCC--CCCcCCCCCCH
Confidence 99 6665 477899999999999999999999999999988766432 221 11233455 78889999999
Q ss_pred eeehhcC
Q 010439 235 YKFASAN 241 (510)
Q Consensus 235 l~~a~~~ 241 (510)
||+|+..
T Consensus 261 Lh~A~~~ 267 (471)
T PHA03095 261 LHYAAVF 267 (471)
T ss_pred HHHHHHc
Confidence 9999954
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.8e-30 Score=266.19 Aligned_cols=220 Identities=17% Similarity=0.137 Sum_probs=194.0
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRG 86 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g 86 (510)
+++++.++.+|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. |+.+++++|++.|++.+... +..|
T Consensus 25 g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~-g~~~~v~~Ll~~~~~~~~~~-~~~g 102 (413)
T PHA02875 25 GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEE-GDVKAVEELLDLGKFADDVF-YKDG 102 (413)
T ss_pred CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHC-CCHHHHHHHHHcCCcccccc-cCCC
Confidence 577788888999999999999999999999999999999989999999999997 99999999999998875432 6789
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcC
Q 010439 87 GTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLM 166 (510)
Q Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~ 166 (510)
+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..+
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~--~~d~~g~TpL~-~A~~~g 179 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLD--IEDCCGCTPLI-IAMAKG 179 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC--CCCCCCCCHHH-HHHHcC
Confidence 999999999999999999999999999999999999999999999999999999999999 89999999999 999999
Q ss_pred CHHHHHHHhhCCCCCCCCCcccc-ccccccccccChHHHHHHHHhhcCCCCCCCCCCce-EEecCCCcceeeehh
Q 010439 167 SRKIWVVVIPCGTANPSKPLRFE-LVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSL-TIYDQATKIRYKFAS 239 (510)
Q Consensus 167 ~~~~~~~Ll~~ga~~~~~~~~~~-~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~-~~~d~~~~t~l~~a~ 239 (510)
+.+++++|+++|++++..+..+. ++++.+...++...+..++.. |+++.+ ...+..+.|+++++.
T Consensus 180 ~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~--------gad~n~~~~~~~~~~t~l~~~~ 246 (413)
T PHA02875 180 DIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR--------GADCNIMFMIEGEECTILDMIC 246 (413)
T ss_pred CHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHC--------CcCcchHhhcCCCchHHHHHHH
Confidence 99999999999999998887775 567768888887776655443 445332 234667788887665
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.97 E-value=5e-30 Score=265.69 Aligned_cols=218 Identities=21% Similarity=0.185 Sum_probs=192.2
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCC-----------------------CCcccCCCCChHHHHHHHhCCc
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA-----------------------SLEWMDKEGKTPLIVACMDSGL 63 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----------------------~~~~~d~~g~TpL~~A~~~~~~ 63 (510)
+++++..+..|.||||+|+..|+.++|++|+++|+ +++.+|..|.||||+|+.. |+
T Consensus 58 Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~-~~ 136 (434)
T PHA02874 58 GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKK-GD 136 (434)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHC-CC
Confidence 56777888899999999999999999999988764 5677889999999999997 99
Q ss_pred HHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccc
Q 010439 64 INVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHIC 143 (510)
Q Consensus 64 ~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga 143 (510)
.+++++|+++|++++.+ |..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 137 ~~~v~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~ 214 (434)
T PHA02874 137 LESIKMLFEYGADVNIE--DDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214 (434)
T ss_pred HHHHHHHHhCCCCCCCc--CCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 99999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCcccccccccccccc-ChHHHHHHHHhhcCCCCCCCCCC
Q 010439 144 YFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDV-QPRAVIALWKAKIDEPKFHQPDP 222 (510)
Q Consensus 144 ~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~-~~~~i~~l~~~~~~~~~~~~~~~ 222 (510)
+++ .++..|.|||| +|+..+. +.+++|+ .|++++.++..|.+|++.++... ....+..|+ ..+++
T Consensus 215 ~i~--~~~~~g~TpL~-~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll--------~~gad- 280 (434)
T PHA02874 215 HIM--NKCKNGFTPLH-NAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILL--------YHKAD- 280 (434)
T ss_pred CCc--CCCCCCCCHHH-HHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHH--------HCcCC-
Confidence 998 88999999999 8888765 5666666 68999999999999999998765 333333322 34566
Q ss_pred ceEEecCCCcceeeehhcCC
Q 010439 223 SLTIYDQATKIRYKFASANE 242 (510)
Q Consensus 223 ~~~~~d~~~~t~l~~a~~~~ 242 (510)
+++.|..|+|||++|....
T Consensus 281 -~n~~d~~g~TpL~~A~~~~ 299 (434)
T PHA02874 281 -ISIKDNKGENPIDTAFKYI 299 (434)
T ss_pred -CCCCCCCCCCHHHHHHHhC
Confidence 7889999999999998543
No 15
>PHA03095 ankyrin-like protein; Provisional
Probab=99.97 E-value=4.2e-30 Score=269.67 Aligned_cols=221 Identities=20% Similarity=0.182 Sum_probs=199.9
Q ss_pred cccChhhhcCCchHHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCChHHHHHHHh-CCcHHHHHHHHHcCCCccccCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMD-SGLINVAKTLIELGANINAYRPG 83 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~-~~~~~~v~~Ll~~ga~~n~~~~d 83 (510)
.+++++.++..|.||||+|+..| ..+++++|+++|++++.+|..|+||||+|+.. .++.+++++|+++|++++.. |
T Consensus 72 ~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~--d 149 (471)
T PHA03095 72 AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNAL--D 149 (471)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCcc--C
Confidence 36788889999999999999999 59999999999999999999999999999942 26789999999999999998 8
Q ss_pred CCCChHHHHHHHcC--CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc--CCHHHHHHHHhccccccccccccCCCCHHH
Q 010439 84 GRGGTPLHHAAKRG--LEPTVRLLLSCGANALVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWLREFYGPSFLE 159 (510)
Q Consensus 84 ~~g~TpLh~A~~~g--~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~--g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~ 159 (510)
..|.||||+|+..+ ..+++++|+++|++++..|..|+||||+|+.. ++.+++++|+++|++++ .+|..|.||||
T Consensus 150 ~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~--~~d~~g~tpLh 227 (471)
T PHA03095 150 LYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPA--ATDMLGNTPLH 227 (471)
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCc--ccCCCCCCHHH
Confidence 99999999999865 68999999999999999999999999999975 77899999999999999 89999999999
Q ss_pred HHhhhcCCH--HHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeee
Q 010439 160 ALAPQLMSR--KIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKF 237 (510)
Q Consensus 160 ~~A~~~~~~--~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~ 237 (510)
+|+..++. .+++.|+..|++++.++..|.+|++.++..++...+..|+. .|++ +++.|..|+||+++
T Consensus 228 -~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~--------~gad--~n~~~~~g~tpl~~ 296 (471)
T PHA03095 228 -SMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIA--------LGAD--INAVSSDGNTPLSL 296 (471)
T ss_pred -HHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH--------cCCC--CcccCCCCCCHHHH
Confidence 89888864 68889999999999999999999999999988777766544 3567 78899999999999
Q ss_pred hhcC
Q 010439 238 ASAN 241 (510)
Q Consensus 238 a~~~ 241 (510)
|+..
T Consensus 297 A~~~ 300 (471)
T PHA03095 297 MVRN 300 (471)
T ss_pred HHHh
Confidence 9843
No 16
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97 E-value=5e-31 Score=264.04 Aligned_cols=186 Identities=25% Similarity=0.214 Sum_probs=175.2
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMD-KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
+..++..|.+|-|+||||+.+++++++++||++|+++|... .-|.||||+|+++ |++.+|.+|+++|||++++ |..
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~-G~~~vv~lLlqhGAdpt~~--D~~ 144 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN-GHISVVDLLLQHGADPTLK--DKQ 144 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc-CcHHHHHHHHHcCCCCcee--cCC
Confidence 45667788999999999999999999999999999999998 5789999999998 9999999999999999999 999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccc-cCCCCHHHHHhhh
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE-FYGPSFLEALAPQ 164 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d-~~g~t~L~~~A~~ 164 (510)
|.+|||+|++.|+.-+|-+||.+|+|++.+|.+|+||||+|+.+|+...++.||+.|+.+. .+| ..|.|||| +|+.
T Consensus 145 G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~--~~d~~~g~TpLH-wa~~ 221 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLL--LTDDNHGNTPLH-WAVV 221 (600)
T ss_pred CCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccc--ccccccCCchHH-HHHh
Confidence 9999999999999999999999999999999999999999999999888999999999998 666 89999999 9999
Q ss_pred cCCHHHHHHHhhCCCCCCCCCccccccccccccc
Q 010439 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQD 198 (510)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~ 198 (510)
.|+.+++.+|++.|++.+..+.+|++|+..+.+.
T Consensus 222 ~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 222 GGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred cCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999988888899999999999999888655
No 17
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.97 E-value=4.3e-30 Score=270.20 Aligned_cols=216 Identities=21% Similarity=0.202 Sum_probs=198.2
Q ss_pred hhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHH-----HHHhCCcHHHHHHHHHcCCCccccCCCC
Q 010439 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIV-----ACMDSGLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 10 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~-----A~~~~~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
.+..+..+.||||+|+..|+.++|++||++|++++..+..|.||||+ |+.. ++.+++++|+++|++++.. |.
T Consensus 28 ~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~-~~~~iv~~Ll~~ga~i~~~--d~ 104 (480)
T PHA03100 28 NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLT-DVKEIVKLLLEYGANVNAP--DN 104 (480)
T ss_pred chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhh-chHHHHHHHHHCCCCCCCC--CC
Confidence 34567889999999999999999999999999999999999999999 9997 9999999999999999988 89
Q ss_pred CCChHHHHHH--HcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC--CHHHHHHHHhccccccccccccCCCCHHHH
Q 010439 85 RGGTPLHHAA--KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG--HINVVRAIESHICYFCGWLREFYGPSFLEA 160 (510)
Q Consensus 85 ~g~TpLh~A~--~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g--~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~ 160 (510)
.|.||||+|+ ..|+.+++++|+++|++++..+..|.||||+|+..| +.+++++|+++|++++ .++..|.||||
T Consensus 105 ~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din--~~d~~g~tpL~- 181 (480)
T PHA03100 105 NGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN--AKNRYGYTPLH- 181 (480)
T ss_pred CCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc--cccCCCCCHHH-
Confidence 9999999999 999999999999999999999999999999999999 9999999999999999 88999999999
Q ss_pred HhhhcCCHHHHHHHhhCCCCCCCCCccc------cccccccccccC--hHHHHHHHHhhcCCCCCCCCCCceEEecCCCc
Q 010439 161 LAPQLMSRKIWVVVIPCGTANPSKPLRF------ELVIYPSLQDVQ--PRAVIALWKAKIDEPKFHQPDPSLTIYDQATK 232 (510)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ga~~~~~~~~~------~~~l~~a~~~~~--~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~ 232 (510)
+|+..++.+++++|+++|++++..+..+ .++++.+...+. ...+..++. .|.+ ++..|..|.
T Consensus 182 ~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~--------~g~d--in~~d~~g~ 251 (480)
T PHA03100 182 IAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLS--------YGVP--INIKDVYGF 251 (480)
T ss_pred HHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHH--------cCCC--CCCCCCCCC
Confidence 9999999999999999999999888777 788888887777 666655443 3445 777889999
Q ss_pred ceeeehhcC
Q 010439 233 IRYKFASAN 241 (510)
Q Consensus 233 t~l~~a~~~ 241 (510)
||||+|+..
T Consensus 252 TpL~~A~~~ 260 (480)
T PHA03100 252 TPLHYAVYN 260 (480)
T ss_pred CHHHHHHHc
Confidence 999999954
No 18
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.97 E-value=1.5e-29 Score=260.69 Aligned_cols=209 Identities=18% Similarity=0.090 Sum_probs=189.0
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHc
Q 010439 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (510)
Q Consensus 17 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~ 96 (510)
.+++||.|+..|+.++|++|+++|+++|..+..|.||||+|+.. |+.+++++|+++|++++.. +..+.||||+|+..
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~ga~~~~~--~~~~~t~L~~A~~~ 78 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKF-RDSEAIKLLMKHGAIPDVK--YPDIESELHDAVEE 78 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHhCCCCcccc--CCCcccHHHHHHHC
Confidence 57999999999999999999999999999999999999999997 9999999999999999987 78899999999999
Q ss_pred CCHHHHHHHHHCCCCCc-cCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHh
Q 010439 97 GLEPTVRLLLSCGANAL-VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (510)
Q Consensus 97 g~~~~v~~Ll~~gad~~-~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll 175 (510)
|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|+++|++++ .++..|.|||| +|+..++.+++++|+
T Consensus 79 g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~--~~~~~g~tpLh-~A~~~~~~~~v~~Ll 155 (413)
T PHA02875 79 GDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPD--IPNTDKFSPLH-LAVMMGDIKGIELLI 155 (413)
T ss_pred CCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC--CCCCCCCCHHH-HHHHcCCHHHHHHHH
Confidence 99999999999998764 456789999999999999999999999999999 89999999999 999999999999999
Q ss_pred hCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCC-cceeeehhcC
Q 010439 176 PCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQAT-KIRYKFASAN 241 (510)
Q Consensus 176 ~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~-~t~l~~a~~~ 241 (510)
++|++++.++..+.+|++.++..++...+..++. .|++ ++..+..| .|++++|+..
T Consensus 156 ~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~--------~ga~--~n~~~~~~~~t~l~~A~~~ 212 (413)
T PHA02875 156 DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLD--------SGAN--IDYFGKNGCVAALCYAIEN 212 (413)
T ss_pred hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh--------CCCC--CCcCCCCCCchHHHHHHHc
Confidence 9999999999999999999999988776665444 3445 55566655 5788878843
No 19
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2e-29 Score=233.94 Aligned_cols=178 Identities=16% Similarity=0.125 Sum_probs=160.0
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC-CcHHHHHHHHHcCCCccccCCCCCCChHHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~-~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~ 92 (510)
...+.||||+|+..|+.++|+.|++. ++..|..|.||||+|+..+ ++.+++++|+++|+++|.++ +..|+||||+
T Consensus 18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh~ 93 (209)
T PHA02859 18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT-RDNNLSALHH 93 (209)
T ss_pred hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC-CCCCCCHHHH
Confidence 45678999999999999999999985 5668899999999999852 48999999999999999882 2589999999
Q ss_pred HHHc---CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH--cCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCC
Q 010439 93 AAKR---GLEPTVRLLLSCGANALVRNDDCHTALGVARI--KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMS 167 (510)
Q Consensus 93 A~~~---g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~--~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~ 167 (510)
|+.. ++.+++++|+++|++++.+|..|.||||+|+. .++.+++++|+++|++++ .+|.+|.||||.+++..++
T Consensus 94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin--~~d~~g~t~Lh~~a~~~~~ 171 (209)
T PHA02859 94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL--NKDFDNNNILYSYILFHSD 171 (209)
T ss_pred HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--cccCCCCcHHHHHHHhcCC
Confidence 8764 47999999999999999999999999999986 468999999999999999 8999999999954667889
Q ss_pred HHHHHHHhhCCCCCCCCCcccccccccccc
Q 010439 168 RKIWVVVIPCGTANPSKPLRFELVIYPSLQ 197 (510)
Q Consensus 168 ~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~ 197 (510)
.+++++|+++|++++.++..+.+|++.+..
T Consensus 172 ~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~ 201 (209)
T PHA02859 172 KKIFDFLTSLGIDINETNKSGYNCYDLIKF 201 (209)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 999999999999999999999999988754
No 20
>PHA02946 ankyin-like protein; Provisional
Probab=99.97 E-value=1.7e-29 Score=260.33 Aligned_cols=209 Identities=15% Similarity=0.079 Sum_probs=182.3
Q ss_pred chHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHH
Q 010439 17 KDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (510)
Q Consensus 17 g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~ 94 (510)
+.++||.++. .++.++|++||++|+++|.+|.+|.||||+|+.. |+.+++++|+++|+++|.+ |..|+||||+|+
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~-g~~eiv~lLL~~GAdin~~--d~~g~TpLh~A~ 113 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKI-NNNRIVAMLLTHGADPNAC--DKQHKTPLYYLS 113 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHc-CCHHHHHHHHHCcCCCCCC--CCCCCCHHHHHH
Confidence 4699998774 4578999999999999999999999999999998 9999999999999999998 899999999998
Q ss_pred HcC--CHHHHHHHHHCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhc--CCHH
Q 010439 95 KRG--LEPTVRLLLSCGANALV-RNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL--MSRK 169 (510)
Q Consensus 95 ~~g--~~~~v~~Ll~~gad~~~-~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~--~~~~ 169 (510)
..+ ..+++++|+++|++++. .|..|.|||| |+..++.+++++|+++|++++ .+|..|+|||| +|+.. ++.+
T Consensus 114 ~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~--~~d~~G~t~Lh-~A~~~~~~~~~ 189 (446)
T PHA02946 114 GTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR--IVDKFGKNHIH-RHLMSDNPKAS 189 (446)
T ss_pred HcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccccc--ccCCCCCCHHH-HHHHhcCCCHH
Confidence 866 48999999999999995 6899999997 677899999999999999999 89999999999 77654 4468
Q ss_pred HHHHHhhCCCCCCCCCcccccccccccccc--ChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcCCC
Q 010439 170 IWVVVIPCGTANPSKPLRFELVIYPSLQDV--QPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEG 243 (510)
Q Consensus 170 ~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~--~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~~~ 243 (510)
++++|+++|++++.++..|.+|++.++..+ ....+..++ .+.+ ++..|..|+||||+|+....
T Consensus 190 ~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl---------~gad--in~~d~~G~TpLh~A~~~~~ 254 (446)
T PHA02946 190 TISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLL---------PSTD--VNKQNKFGDSPLTLLIKTLS 254 (446)
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHH---------cCCC--CCCCCCCCCCHHHHHHHhCC
Confidence 999999999999999999999999999765 333332211 1345 88899999999999996654
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.97 E-value=2.4e-29 Score=274.81 Aligned_cols=229 Identities=15% Similarity=0.102 Sum_probs=144.4
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHH--------------
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI-------------- 71 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll-------------- 71 (510)
.+++++.+|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+.. ++.+++++|+
T Consensus 167 ~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~-~~~~ivk~Ll~~~~~~~~~~~~L~ 245 (682)
T PHA02876 167 GGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDS-KNIDTIKAIIDNRSNINKNDLSLL 245 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHc-CCHHHHHHHHhcCCCCCCCcHHHH
Confidence 3577888999999999999999999999999999999887777777777776664 5555544333
Q ss_pred ---------------HcCCCccccCCCCCCChHHHHHHHcCCH-HHHHHHHHCCCCCccCCCCCCcHHHHHHHcC-CHHH
Q 010439 72 ---------------ELGANINAYRPGGRGGTPLHHAAKRGLE-PTVRLLLSCGANALVRNDDCHTALGVARIKG-HINV 134 (510)
Q Consensus 72 ---------------~~ga~~n~~~~d~~g~TpLh~A~~~g~~-~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g-~~~~ 134 (510)
+.|++++.. |..|+||||+|+..++. +++++|++.|++++.+|..|.||||+|+..| ..++
T Consensus 246 ~ai~~~~~~~~~~Ll~~g~~vn~~--d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~ 323 (682)
T PHA02876 246 KAIRNEDLETSLLLYDAGFSVNSI--DDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTEN 323 (682)
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHH
Confidence 344445544 55566666666666654 4666666666666666666666666666665 3555
Q ss_pred HHHHHhccccccccccccCCCCHHHHHhhh-cCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhh--
Q 010439 135 VRAIESHICYFCGWLREFYGPSFLEALAPQ-LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAK-- 211 (510)
Q Consensus 135 v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~-~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~-- 211 (510)
+++|+..|++++ .+|..|.|||| +|+. .+..+++++|++.|++++.++..+.+|++.++..++...+..++...
T Consensus 324 v~~Ll~~gadin--~~d~~g~TpLh-~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad 400 (682)
T PHA02876 324 IRTLIMLGADVN--AADRLYITPLH-QASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD 400 (682)
T ss_pred HHHHHHcCCCCC--CcccCCCcHHH-HHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 555555555555 45555555555 4433 23455555555555555555555555555555544444443333111
Q ss_pred ------------------------cCCCCCCCCCCceEEecCCCcceeeehhcCC
Q 010439 212 ------------------------IDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (510)
Q Consensus 212 ------------------------~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~~ 242 (510)
+..++..+.+ ++..|..|+||||+|+...
T Consensus 401 ~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad--in~~d~~G~TpLh~Aa~~~ 453 (682)
T PHA02876 401 IEALSQKIGTALHFALCGTNPYMSVKTLIDRGAN--VNSKNKDLSTPLHYACKKN 453 (682)
T ss_pred ccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCC--CCcCCCCCChHHHHHHHhC
Confidence 1122334556 7788889999999988543
No 22
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2.9e-29 Score=263.00 Aligned_cols=185 Identities=21% Similarity=0.230 Sum_probs=170.0
Q ss_pred ccChhhhcCCchHHHHHHHHcCCH--------------------------------------------------------
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDV-------------------------------------------------------- 30 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~-------------------------------------------------------- 30 (510)
+++++.+|.+|.||||+|+..|+.
T Consensus 60 gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~ 139 (477)
T PHA02878 60 GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKK 139 (477)
T ss_pred CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhc
Confidence 577888999999999999986543
Q ss_pred --------HHHHHHHHcCCCCcccCCC-CChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHH
Q 010439 31 --------DAIRALRSQGASLEWMDKE-GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPT 101 (510)
Q Consensus 31 --------~~v~~Ll~~g~~~~~~d~~-g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~ 101 (510)
+++++|+++|++++..|.. |.||||+|+.. |+.+++++|+++|++++.. |..|+||||+|+..|+.++
T Consensus 140 ~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~-~~~~iv~~Ll~~gad~n~~--d~~g~tpLh~A~~~~~~~i 216 (477)
T PHA02878 140 SKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATEN-KDQRLTELLLSYGANVNIP--DKTNNSPLHHAVKHYNKPI 216 (477)
T ss_pred cchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhC-CCHHHHHHHHHCCCCCCCc--CCCCCCHHHHHHHhCCHHH
Confidence 2677788889999999988 99999999998 9999999999999999998 8999999999999999999
Q ss_pred HHHHHHCCCCCccCCCCCCcHHHHHHHc-CCHHHHHHHHhcccccccccccc-CCCCHHHHHhhhcCCHHHHHHHhhCCC
Q 010439 102 VRLLLSCGANALVRNDDCHTALGVARIK-GHINVVRAIESHICYFCGWLREF-YGPSFLEALAPQLMSRKIWVVVIPCGT 179 (510)
Q Consensus 102 v~~Ll~~gad~~~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~ga~~~~~~~d~-~g~t~L~~~A~~~~~~~~~~~Ll~~ga 179 (510)
+++|++.|++++.+|..|.||||+|+.. ++.+++++|+++|++++ .++. .|.|||| +| .++.+++++|+++|+
T Consensus 217 v~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn--~~~~~~g~TpLh-~A--~~~~~~v~~Ll~~ga 291 (477)
T PHA02878 217 VHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN--AKSYILGLTALH-SS--IKSERKLKLLLEYGA 291 (477)
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC--ccCCCCCCCHHH-HH--ccCHHHHHHHHHCCC
Confidence 9999999999999999999999999976 78999999999999999 6765 7999999 78 577899999999999
Q ss_pred CCCCCCcccccccccccccc
Q 010439 180 ANPSKPLRFELVIYPSLQDV 199 (510)
Q Consensus 180 ~~~~~~~~~~~~l~~a~~~~ 199 (510)
|++..+..|.+|++.++...
T Consensus 292 din~~d~~g~TpL~~A~~~~ 311 (477)
T PHA02878 292 DINSLNSYKLTPLSSAVKQY 311 (477)
T ss_pred CCCCcCCCCCCHHHHHHHHc
Confidence 99999999999999998643
No 23
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.96 E-value=8e-29 Score=270.76 Aligned_cols=230 Identities=18% Similarity=0.096 Sum_probs=200.0
Q ss_pred ccChhhhcCCchHHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDV-DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
+++.+.++..|.||||+|+..|+. +++++|+++|++++.+|..|.||||+|+..+...+++++|+..|++++.. |..
T Consensus 263 g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~--d~~ 340 (682)
T PHA02876 263 GFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAA--DRL 340 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCc--ccC
Confidence 456777888999999999999997 58999999999999999999999999999833799999999999999998 899
Q ss_pred CChHHHHHHHc-CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 86 GGTPLHHAAKR-GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 86 g~TpLh~A~~~-g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
|+||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++ ..+..|.|||| +|+.
T Consensus 341 g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~--~~~~~g~T~Lh-~A~~ 417 (682)
T PHA02876 341 YITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIE--ALSQKIGTALH-FALC 417 (682)
T ss_pred CCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcc--ccCCCCCchHH-HHHH
Confidence 99999999985 57899999999999999999999999999999999999999999999999 89999999999 7765
Q ss_pred cC-CHHHHHHHhhCCCCCCCCCccccccccccccccC-hHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcCC
Q 010439 165 LM-SRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ-PRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANE 242 (510)
Q Consensus 165 ~~-~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~-~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~~ 242 (510)
.+ ...++++|+++|++++.++..|.+|++.++..+. ...+..| +..+++ ++..|..|.||+++|+...
T Consensus 418 ~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lL--------l~~Gad--~n~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 418 GTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEML--------LDNGAD--VNAINIQNQYPLLIALEYH 487 (682)
T ss_pred cCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHH--------HHCCCC--CCCCCCCCCCHHHHHHHhC
Confidence 54 4678999999999999999999999999987653 3333322 234667 8889999999999998654
Q ss_pred CChHHHHHHH
Q 010439 243 GDKHQLQWLD 252 (510)
Q Consensus 243 ~~~~ql~~~~ 252 (510)
..+.++..+
T Consensus 488 -~~v~~Ll~~ 496 (682)
T PHA02876 488 -GIVNILLHY 496 (682)
T ss_pred -CHHHHHHHC
Confidence 344444433
No 24
>PHA02798 ankyrin-like protein; Provisional
Probab=99.96 E-value=1.1e-28 Score=259.32 Aligned_cols=200 Identities=15% Similarity=0.108 Sum_probs=178.4
Q ss_pred cccChhhhcCCchHHHHHHHHc-----CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC--CcHHHHHHHHHcCCCcc
Q 010439 6 NSMNQHQQRQSKDELLYQWVIA-----GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANIN 78 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~--~~~~~v~~Ll~~ga~~n 78 (510)
.++++|.++..|.||||.|+.+ +..+++++|+++|+|+|.+|..|+||||+|+..+ ++.+++++|+++|++++
T Consensus 60 ~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn 139 (489)
T PHA02798 60 LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT 139 (489)
T ss_pred CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc
Confidence 4678888999999999999864 7799999999999999999999999999999863 37899999999999999
Q ss_pred ccCCCCCCChHHHHHHHcCC---HHHHHHHHHCCCCCccCC-CCCCcHHHHHHHc----CCHHHHHHHHhccccccc---
Q 010439 79 AYRPGGRGGTPLHHAAKRGL---EPTVRLLLSCGANALVRN-DDCHTALGVARIK----GHINVVRAIESHICYFCG--- 147 (510)
Q Consensus 79 ~~~~d~~g~TpLh~A~~~g~---~~~v~~Ll~~gad~~~~d-~~g~TpL~~A~~~----g~~~~v~~Ll~~ga~~~~--- 147 (510)
.. |..|+||||+|+..++ .+++++|+++|+|++.++ ..|.||||.++.. ++.+++++|+++|++++.
T Consensus 140 ~~--d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~ 217 (489)
T PHA02798 140 LL--DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK 217 (489)
T ss_pred cc--CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence 98 8999999999999988 999999999999999885 5789999998764 478999999988875541
Q ss_pred ----------------------------------cccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCcccccccc
Q 010439 148 ----------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIY 193 (510)
Q Consensus 148 ----------------------------------~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~ 193 (510)
+.+|..|.|||| +|+..++.+++++|+++|+|++.++..|++|++
T Consensus 218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL~-~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~ 296 (489)
T PHA02798 218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLY-YSVSHNNRKIFEYLLQLGGDINIITELGNTCLF 296 (489)
T ss_pred cccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHHH-HHHHcCcHHHHHHHHHcCCcccccCCCCCcHHH
Confidence 146778999999 999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHH
Q 010439 194 PSLQDVQPRAVIALW 208 (510)
Q Consensus 194 ~a~~~~~~~~i~~l~ 208 (510)
.+...+....+..++
T Consensus 297 ~A~~~~~~~iv~~lL 311 (489)
T PHA02798 297 TAFENESKFIFNSIL 311 (489)
T ss_pred HHHHcCcHHHHHHHH
Confidence 999988877666544
No 25
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.96 E-value=2e-28 Score=257.52 Aligned_cols=219 Identities=16% Similarity=0.134 Sum_probs=170.0
Q ss_pred cccChhhhcCCchHHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC-----CcHHHHHHHHHcCCCcc
Q 010439 6 NSMNQHQQRQSKDELLYQWVIA--GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-----GLINVAKTLIELGANIN 78 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~-----~~~~~v~~Ll~~ga~~n 78 (510)
.++++|.+ .+|.|+||+++.. ++.++|++||++|+|+|.++ .+.||||.|+.++ ++.+++++|+++|+|+|
T Consensus 25 ~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin 102 (494)
T PHA02989 25 TGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADIN 102 (494)
T ss_pred cCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCC
Confidence 36677777 5688988776654 37899999999999999876 5789999887641 34789999999999999
Q ss_pred ccCCCCCCChHHHHHHHc---CCHHHHHHHHHCCCCC-ccCCCCCCcHHHHHHHc--CCHHHHHHHHhccccccccc-cc
Q 010439 79 AYRPGGRGGTPLHHAAKR---GLEPTVRLLLSCGANA-LVRNDDCHTALGVARIK--GHINVVRAIESHICYFCGWL-RE 151 (510)
Q Consensus 79 ~~~~d~~g~TpLh~A~~~---g~~~~v~~Ll~~gad~-~~~d~~g~TpL~~A~~~--g~~~~v~~Ll~~ga~~~~~~-~d 151 (510)
.+ |..|+||||.|+.. ++.+++++|+++|+|+ +.+|..|+||||+|+.. ++.++|++|+++|++++ . .+
T Consensus 103 ~~--d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~--~~~~ 178 (494)
T PHA02989 103 LK--TFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLF--EKTS 178 (494)
T ss_pred CC--CCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--cccc
Confidence 98 88999999988765 6789999999999999 78999999999998764 57899999999999998 5 67
Q ss_pred cCCCCHHHHHhhhc----CCHHHHHHHhhCCCCCCCCCcc--------------------------------------cc
Q 010439 152 FYGPSFLEALAPQL----MSRKIWVVVIPCGTANPSKPLR--------------------------------------FE 189 (510)
Q Consensus 152 ~~g~t~L~~~A~~~----~~~~~~~~Ll~~ga~~~~~~~~--------------------------------------~~ 189 (510)
..|.|||| +|+.. ++.+++++|+++|++++.++.. |.
T Consensus 179 ~~g~tpL~-~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~ 257 (494)
T PHA02989 179 LYGLTPMN-IYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGF 257 (494)
T ss_pred ccCCChHH-HHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCC
Confidence 88999999 77654 4889999999999888766643 44
Q ss_pred ccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcC
Q 010439 190 LVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (510)
Q Consensus 190 ~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~ 241 (510)
+|++.++..++...+.. ++..|++ ++..|..|.|||++|+..
T Consensus 258 TpL~~Aa~~~~~~~v~~--------LL~~Gad--in~~d~~G~TpL~~A~~~ 299 (494)
T PHA02989 258 NPLLISAKVDNYEAFNY--------LLKLGDD--IYNVSKDGDTVLTYAIKH 299 (494)
T ss_pred CHHHHHHHhcCHHHHHH--------HHHcCCC--ccccCCCCCCHHHHHHHc
Confidence 44444444444333332 2334556 677778888888887743
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=7e-28 Score=245.69 Aligned_cols=236 Identities=16% Similarity=0.068 Sum_probs=182.1
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHH-----cCCCccccC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIE-----LGANINAYR 81 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~-----~ga~~n~~~ 81 (510)
++++|..|+.|.||||.|+..++.|..+.|++.|+++-..|.+|.+|+|.|++. |..++.++.+. .+..+|..
T Consensus 144 ~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s-~s~e~mEi~l~~~g~~r~~~in~~- 221 (929)
T KOG0510|consen 144 GADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARS-GSKECMEIFLPEHGYERQTHINFD- 221 (929)
T ss_pred cCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHh-cchhhhhhhhccccchhhcccccc-
Confidence 366777777777777777777777777777777777777777777777777776 77777777776 56677776
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCC---------------CccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGAN---------------ALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 82 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad---------------~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
+..|.||||.|+..|+.++++.+|+.|.. ++..|++|.||||+|++.|+.+.|+.|+..|++++
T Consensus 222 -~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~ 300 (929)
T KOG0510|consen 222 -NNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASIN 300 (929)
T ss_pred -cCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCccc
Confidence 77788888888888888888888877643 35578889999999999999999999999999998
Q ss_pred ccccccCCCCHHHHHhhhcCCHHHHHHHhh-CC-CCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCce
Q 010439 147 GWLREFYGPSFLEALAPQLMSRKIWVVVIP-CG-TANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSL 224 (510)
Q Consensus 147 ~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~-~g-a~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 224 (510)
.++.++.|||| .|+.+|+..+++.|++ .| ...+..|..+.+|+|.+.+.++.+.+..|++....... .
T Consensus 301 --~kn~d~~spLH-~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~-------~ 370 (929)
T KOG0510|consen 301 --SKNKDEESPLH-FAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN-------M 370 (929)
T ss_pred --ccCCCCCCchH-HHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc-------c
Confidence 88899999999 8999999999998887 43 45677888889999999988888877766654432221 1
Q ss_pred EEecCCCcceeeehh-cCCCChHHHHHHHHhhc
Q 010439 225 TIYDQATKIRYKFAS-ANEGDKHQLQWLDNACR 256 (510)
Q Consensus 225 ~~~d~~~~t~l~~a~-~~~~~~~ql~~~~~~~~ 256 (510)
...|.+|.|+||+|+ ..+...++.+..+ +|.
T Consensus 371 ~e~D~dg~TaLH~Aa~~g~~~av~~Li~~-Ga~ 402 (929)
T KOG0510|consen 371 SEADSDGNTALHLAAKYGNTSAVQKLISH-GAD 402 (929)
T ss_pred cccccCCchhhhHHHHhccHHHHHHHHHc-CCc
Confidence 134899999999999 5555566666655 443
No 27
>PHA02798 ankyrin-like protein; Provisional
Probab=99.95 E-value=2.2e-27 Score=249.30 Aligned_cols=217 Identities=18% Similarity=0.181 Sum_probs=175.8
Q ss_pred ChhhhcCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHh----CCcHHHHHHHHHcCCCccccCC
Q 010439 9 NQHQQRQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGANINAYRP 82 (510)
Q Consensus 9 ~~~~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~----~~~~~~v~~Ll~~ga~~n~~~~ 82 (510)
+.+.. ..|.|+++.+.. .++.++|++|+++|+++|.+|..|.||||+|+.+ .+..+++++|+++|+|+|.+
T Consensus 29 ~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~-- 105 (489)
T PHA02798 29 NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKK-- 105 (489)
T ss_pred Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCC--
Confidence 44443 457787775554 4589999999999999999999999999998752 15689999999999999998
Q ss_pred CCCCChHHHHHHHcC---CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC---HHHHHHHHhcccccccccc-ccCCC
Q 010439 83 GGRGGTPLHHAAKRG---LEPTVRLLLSCGANALVRNDDCHTALGVARIKGH---INVVRAIESHICYFCGWLR-EFYGP 155 (510)
Q Consensus 83 d~~g~TpLh~A~~~g---~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~---~~~v~~Ll~~ga~~~~~~~-d~~g~ 155 (510)
|..|+||||+|+..+ +.+++++|+++|+|++.+|..|.||||+|+..++ .+++++|+++|++++ .+ +..|.
T Consensus 106 d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin--~~~~~~~~ 183 (489)
T PHA02798 106 NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDIN--THNNKEKY 183 (489)
T ss_pred CCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcc--cccCcCCC
Confidence 889999999999875 7899999999999999999999999999999998 999999999999998 66 45789
Q ss_pred CHHHHHhhhc----CCHHHHHHHhhCCCCCCCC---------------------------------------Cccccccc
Q 010439 156 SFLEALAPQL----MSRKIWVVVIPCGTANPSK---------------------------------------PLRFELVI 192 (510)
Q Consensus 156 t~L~~~A~~~----~~~~~~~~Ll~~ga~~~~~---------------------------------------~~~~~~~l 192 (510)
|||| .+... ++.+++++|+++|++++.. +..|.+|+
T Consensus 184 t~Lh-~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~~dvN~~d~~G~TPL 262 (489)
T PHA02798 184 DTLH-CYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPL 262 (489)
T ss_pred cHHH-HHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhcCCCCCcCcCCccHH
Confidence 9999 66543 4789999999888766553 34456666
Q ss_pred cccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcC
Q 010439 193 YPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASAN 241 (510)
Q Consensus 193 ~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~ 241 (510)
+.++..++...+..| +..|++ +++.|..|+|||++|+.+
T Consensus 263 ~~A~~~~~~~~v~~L--------L~~GAd--in~~d~~G~TpL~~A~~~ 301 (489)
T PHA02798 263 YYSVSHNNRKIFEYL--------LQLGGD--INIITELGNTCLFTAFEN 301 (489)
T ss_pred HHHHHcCcHHHHHHH--------HHcCCc--ccccCCCCCcHHHHHHHc
Confidence 666666554444433 334556 778888888888888743
No 28
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.95 E-value=1.1e-27 Score=244.38 Aligned_cols=233 Identities=19% Similarity=0.138 Sum_probs=189.9
Q ss_pred cChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCC
Q 010439 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (510)
Q Consensus 8 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~ 87 (510)
++.+..+.++.+|||+|+..|+++.++.|+++|+|+|..|..|.||||+||.. ++.|..++|++.|+++-.. |.+|+
T Consensus 112 ad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~-~~~E~~k~Li~~~a~~~K~--~~~~~ 188 (929)
T KOG0510|consen 112 ADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARK-NKVEAKKELINKGADPCKS--DIDGN 188 (929)
T ss_pred CCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhc-ChHHHHHHHHhcCCCCCcc--cCcCC
Confidence 45556677778888888888888888888888888888888888888888876 7777777888888888766 77888
Q ss_pred hHHHHHHHcCCHHHHHHHHH-----CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccc-------------cc
Q 010439 88 TPLHHAAKRGLEPTVRLLLS-----CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCG-------------WL 149 (510)
Q Consensus 88 TpLh~A~~~g~~~~v~~Ll~-----~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~-------------~~ 149 (510)
+|+|.|++.|..++.++.+. .+..+|..+..|.||||.|+..|+.++++.+|+.|..... +.
T Consensus 189 ~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~ 268 (929)
T KOG0510|consen 189 FPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVND 268 (929)
T ss_pred chHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhc
Confidence 88888888888888888876 5667888889999999999999999999999988854331 35
Q ss_pred cccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecC
Q 010439 150 REFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQ 229 (510)
Q Consensus 150 ~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~ 229 (510)
.|.+|.|||| +|+..|+.+.++.|+..|++++.++..+.+|+|.|+..+...++..|+++.- ...++..|.
T Consensus 269 ~d~dg~tpLH-~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~--------~rllne~D~ 339 (929)
T KOG0510|consen 269 EDNDGCTPLH-YAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESD--------TRLLNESDL 339 (929)
T ss_pred ccccCCchHH-HHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcC--------ccccccccc
Confidence 6889999999 9999999999999999999999999999999999999999999998877221 234677888
Q ss_pred CCcceeeehhcCCCC-hHHHHHHH
Q 010439 230 ATKIRYKFASANEGD-KHQLQWLD 252 (510)
Q Consensus 230 ~~~t~l~~a~~~~~~-~~ql~~~~ 252 (510)
.|.||||+++.+..+ ..|+++-.
T Consensus 340 ~g~tpLHlaa~~gH~~v~qlLl~~ 363 (929)
T KOG0510|consen 340 HGMTPLHLAAKSGHDRVVQLLLNK 363 (929)
T ss_pred cCCCchhhhhhcCHHHHHHHHHhc
Confidence 999999999944444 44444433
No 29
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.95 E-value=4.2e-27 Score=247.54 Aligned_cols=200 Identities=14% Similarity=0.126 Sum_probs=151.8
Q ss_pred cccChhhhcCCchHHHHHHHH------cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC--CcHHHHHHHHHcCCCc
Q 010439 6 NSMNQHQQRQSKDELLYQWVI------AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS--GLINVAKTLIELGANI 77 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~------~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~--~~~~~v~~Ll~~ga~~ 77 (510)
.++++|.++ .+.||||.|+. .|+.++|++||++|+|+|.+|..|.||||.|+..+ ++.+++++|+++|+|+
T Consensus 59 ~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadi 137 (494)
T PHA02989 59 NGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINV 137 (494)
T ss_pred cCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCc
Confidence 355666555 45777777764 46777777777777777777777777777766532 4577777777777777
Q ss_pred -cccCCCCCCChHHHHHHHc--CCHHHHHHHHHCCCCCcc-CCCCCCcHHHHHHHcC----CHHHHHHHHhccccccc--
Q 010439 78 -NAYRPGGRGGTPLHHAAKR--GLEPTVRLLLSCGANALV-RNDDCHTALGVARIKG----HINVVRAIESHICYFCG-- 147 (510)
Q Consensus 78 -n~~~~d~~g~TpLh~A~~~--g~~~~v~~Ll~~gad~~~-~d~~g~TpL~~A~~~g----~~~~v~~Ll~~ga~~~~-- 147 (510)
+.. |..|+||||+|+.. ++.++|++|+++|+|++. .+..|.||||+|+..+ +.+++++|+++|++++.
T Consensus 138 n~~~--d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~ 215 (494)
T PHA02989 138 NDVK--NSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNN 215 (494)
T ss_pred cccc--CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccC
Confidence 565 67777777777653 567777777777777776 5667777777776553 67777777777766541
Q ss_pred ----------------------------------cccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCcccccccc
Q 010439 148 ----------------------------------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIY 193 (510)
Q Consensus 148 ----------------------------------~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~ 193 (510)
+.+|..|.|||| +|+..++.+++++|+++|+|++.++..|.+|++
T Consensus 216 ~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~-~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~ 294 (494)
T PHA02989 216 NGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLL-ISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLT 294 (494)
T ss_pred CccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHH-HHHHhcCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 145677999999 999999999999999999999999999999999
Q ss_pred ccccccChHHHHHHHH
Q 010439 194 PSLQDVQPRAVIALWK 209 (510)
Q Consensus 194 ~a~~~~~~~~i~~l~~ 209 (510)
.+...++...+..++.
T Consensus 295 ~A~~~~~~~iv~~LL~ 310 (494)
T PHA02989 295 YAIKHGNIDMLNRILQ 310 (494)
T ss_pred HHHHcCCHHHHHHHHh
Confidence 9999988777765543
No 30
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95 E-value=8.6e-27 Score=216.35 Aligned_cols=151 Identities=15% Similarity=0.115 Sum_probs=137.1
Q ss_pred hhhhcCCchHHHHHHHHcC--CHHHHHHHHHcCCCCcccC-CCCChHHHHHHHhC--CcHHHHHHHHHcCCCccccCCCC
Q 010439 10 QHQQRQSKDELLYQWVIAG--DVDAIRALRSQGASLEWMD-KEGKTPLIVACMDS--GLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 10 ~~~~~~~g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~d-~~g~TpL~~A~~~~--~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
.+..+..|.||||+|+..+ +.++|++||++|+++|.++ ..|.||||+|+... ++.+++++|+++|+++|.+ |.
T Consensus 44 ~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~--d~ 121 (209)
T PHA02859 44 VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEE--DE 121 (209)
T ss_pred hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCc--CC
Confidence 4567889999999999864 8999999999999999997 48999999988642 4799999999999999998 89
Q ss_pred CCChHHHHHHH--cCCHHHHHHHHHCCCCCccCCCCCCcHHHH-HHHcCCHHHHHHHHhccccccccccccCCCCHHHHH
Q 010439 85 RGGTPLHHAAK--RGLEPTVRLLLSCGANALVRNDDCHTALGV-ARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL 161 (510)
Q Consensus 85 ~g~TpLh~A~~--~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~-A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~ 161 (510)
.|.||||+|+. .++.+++++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++ .+|..|.|||| +
T Consensus 122 ~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~--~~d~~g~tpl~-l 198 (209)
T PHA02859 122 DGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDIN--ETNKSGYNCYD-L 198 (209)
T ss_pred CCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCC--CCCCCCCCHHH-H
Confidence 99999999986 468999999999999999999999999995 567889999999999999999 89999999999 7
Q ss_pred hhhc
Q 010439 162 APQL 165 (510)
Q Consensus 162 A~~~ 165 (510)
|...
T Consensus 199 a~~~ 202 (209)
T PHA02859 199 IKFR 202 (209)
T ss_pred Hhhh
Confidence 7654
No 31
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95 E-value=9.4e-27 Score=232.33 Aligned_cols=168 Identities=13% Similarity=0.019 Sum_probs=151.8
Q ss_pred hhcCCchHHHHHHHH--cCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCcccc-CC---CCC
Q 010439 12 QQRQSKDELLYQWVI--AGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAY-RP---GGR 85 (510)
Q Consensus 12 ~~~~~g~t~L~~A~~--~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~-~~---d~~ 85 (510)
.++.+++|+||.|+. .|+.++|++|+++|||++.. ++.||||+|+.. ++.+++++|+++|++.+.. +. +..
T Consensus 111 ~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~-~~~eIVk~Lls~Ga~~~n~~~~~l~~~~ 187 (437)
T PHA02795 111 KNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK-KESSVVEFILNCGIPDENDVKLDLYKII 187 (437)
T ss_pred hccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc-CcHHHHHHHHhcCCcccccccchhhhhh
Confidence 567889999999999 89999999999999999884 568999999997 9999999999999854322 00 134
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhc
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~ 165 (510)
|.|++|.|+..++.+++++|+++|+|++.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|.|||| +|+..
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN--~~d~~G~TpLh-~Aa~~ 264 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVN--AVMSNGYTCLD-VAVDR 264 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CcCCCCCCHHH-HHHHc
Confidence 7899999999999999999999999999999999999999999999999999999999999 89999999999 89888
Q ss_pred C--------CHHHHHHHhhCCCCCCCCC
Q 010439 166 M--------SRKIWVVVIPCGTANPSKP 185 (510)
Q Consensus 166 ~--------~~~~~~~Ll~~ga~~~~~~ 185 (510)
| +.+++++|+++|++++...
T Consensus 265 g~~~~~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 265 GSVIARRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred CCcccccccHHHHHHHHHhCCCCCCchh
Confidence 7 4699999999999987654
No 32
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=2.4e-27 Score=228.05 Aligned_cols=188 Identities=23% Similarity=0.225 Sum_probs=144.4
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHc-CCCCc--------ccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCC
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQ-GASLE--------WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~--------~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
..+|.|||.+|+++|+.++|++|+++ ++++. -....|-+||-.|+.. ||+++|++|+++|+++|.. ..
T Consensus 39 ~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaA-GHl~vVk~L~~~ga~VN~t--T~ 115 (615)
T KOG0508|consen 39 VQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAA-GHLEVVKLLLRRGASVNDT--TR 115 (615)
T ss_pred ccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhcc-CcHHHHHHHHHhcCccccc--cc
Confidence 45677888888888888888888883 34432 2234677777777765 8888888888888888866 55
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
...|||--||.-|+.++|++|+++|+|+++.|..|.|.||+|+.+||.+|+++|++.|+|+| .++..|.|+|| .++.
T Consensus 116 TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn--~ks~kGNTALH-~caE 192 (615)
T KOG0508|consen 116 TNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVN--AKSYKGNTALH-DCAE 192 (615)
T ss_pred cCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcc--hhcccCchHHH-hhhh
Confidence 66688888888888888888888888888888888888888888888888888888888888 78888888888 7888
Q ss_pred cCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHH
Q 010439 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALW 208 (510)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~ 208 (510)
.|+.+|+++|+.+|+.++. +..|.+|+..+...++...+..+.
T Consensus 193 sG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 193 SGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred cccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHh
Confidence 8888888888888876643 445788888877777776666554
No 33
>PHA02917 ankyrin-like protein; Provisional
Probab=99.94 E-value=2e-26 Score=246.43 Aligned_cols=218 Identities=14% Similarity=0.112 Sum_probs=175.9
Q ss_pred cccChhhhcCCchHHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcH----HHHHHHHHcCCCcc
Q 010439 6 NSMNQHQQRQSKDELLYQWVIA---GDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANIN 78 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~----~~v~~Ll~~ga~~n 78 (510)
++...+.+|.+|+||||+|+.. |+.++|++||++|++++.+|..|+||||+|+.. |+. +++++|++.+...|
T Consensus 21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~-g~~~v~~~~~~~Ll~~~~~~n 99 (661)
T PHA02917 21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNS-RHVKVNKDIAMALLEATGYSN 99 (661)
T ss_pred ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHc-CChhHHHHHHHHHHhccCCCC
Confidence 4555677799999999998655 889999999999999999999999999999997 774 46688888765555
Q ss_pred ccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHH--HcCCHHHHHHHHhcccccccccccc---C
Q 010439 79 AYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVAR--IKGHINVVRAIESHICYFCGWLREF---Y 153 (510)
Q Consensus 79 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~--~~g~~~~v~~Ll~~ga~~~~~~~d~---~ 153 (510)
.. + ..+++|+|+..++.++|++|+++|+|++.+|..|+||||+|+ ..|+.++|++|+++|++++ .+|. .
T Consensus 100 ~~--~--~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn--~~d~~~~~ 173 (661)
T PHA02917 100 IN--D--FNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL--YEDEDDEY 173 (661)
T ss_pred CC--C--cchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc--cccccccc
Confidence 54 3 237788899999999999999999999999999999999654 5789999999999999997 4443 3
Q ss_pred C-----------CCHHHHHhhh-----------cCCHHHHHHHhhCCCCCCCCCccccccccccccccChH-HHHHHHHh
Q 010439 154 G-----------PSFLEALAPQ-----------LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPR-AVIALWKA 210 (510)
Q Consensus 154 g-----------~t~L~~~A~~-----------~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~-~i~~l~~~ 210 (510)
| .|||| +|+. +++.+++++|+++|+|++.++..|.+|++.++..++.. .+.+++..
T Consensus 174 g~~~~~~~~~~~~t~L~-~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 174 GYAYDDYQPRNCGTVLH-LYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred ccccccccccccccHHH-HHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 4 59999 7764 56899999999999999999999999999999888753 23332222
Q ss_pred hcCCCCCCCCCC--ceEEecCCCcceeeehh
Q 010439 211 KIDEPKFHQPDP--SLTIYDQATKIRYKFAS 239 (510)
Q Consensus 211 ~~~~~~~~~~~~--~~~~~d~~~~t~l~~a~ 239 (510)
+.+. ...+.|..+.++++++.
T Consensus 253 --------g~d~~~~~~~~~~~~~~~~~~a~ 275 (661)
T PHA02917 253 --------GIDNTAYSYIDDLTCCTRGIMAD 275 (661)
T ss_pred --------CCcccccccccCcccccchHHHH
Confidence 2220 12345566677777777
No 34
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=5e-27 Score=225.87 Aligned_cols=157 Identities=25% Similarity=0.287 Sum_probs=151.3
Q ss_pred hcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHH
Q 010439 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (510)
Q Consensus 13 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~ 92 (510)
....|-+||-.|+..||+++||.|+++|++||.......|||--||.- |+.++|++|+++|+|+++. |..|.|.||+
T Consensus 80 e~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfD-G~leivKyLvE~gad~~Ia--nrhGhTcLmI 156 (615)
T KOG0508|consen 80 ETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFD-GHLEIVKYLVEHGADPEIA--NRHGHTCLMI 156 (615)
T ss_pred cccCCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhc-chhHHHHHHHHcCCCCccc--ccCCCeeEEe
Confidence 456789999999999999999999999999999988889999999997 9999999999999999998 9999999999
Q ss_pred HHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHH
Q 010439 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (510)
Q Consensus 93 A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~ 172 (510)
||.+||.+|+++|++.|+|+|.++..|.|+||.+++.|+++++++|+++|+.+. +|..|.|||. .|+..|+.++++
T Consensus 157 a~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~---~d~~GmtPL~-~Aa~tG~~~iVe 232 (615)
T KOG0508|consen 157 ACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID---VDGHGMTPLL-LAAVTGHTDIVE 232 (615)
T ss_pred eeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceee---ecCCCCchHH-HHhhhcchHHHH
Confidence 999999999999999999999999999999999999999999999999999986 7889999999 999999999999
Q ss_pred HHhh
Q 010439 173 VVIP 176 (510)
Q Consensus 173 ~Ll~ 176 (510)
+|++
T Consensus 233 ~L~~ 236 (615)
T KOG0508|consen 233 RLLQ 236 (615)
T ss_pred HHhc
Confidence 9996
No 35
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=5.1e-27 Score=219.22 Aligned_cols=166 Identities=25% Similarity=0.378 Sum_probs=151.2
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCChHHHHHHHh----CCcHHHHHHHHHcCCCccccC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQG-ASLEWMDKEGKTPLIVACMD----SGLINVAKTLIELGANINAYR 81 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~TpL~~A~~~----~~~~~~v~~Ll~~ga~~n~~~ 81 (510)
.+-+|.-|.+|+|+||||+.++++++|+.||+-| +++|..|+.|+||+|+|+.. ..+.++|..|.+.| |+|++-
T Consensus 258 ~yvVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA 336 (452)
T KOG0514|consen 258 EYVVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA 336 (452)
T ss_pred HHHhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence 3446778999999999999999999999999988 69999999999999999874 14578899999886 888874
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc-cccccccccccCCCCHHHH
Q 010439 82 PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYGPSFLEA 160 (510)
Q Consensus 82 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~t~L~~ 160 (510)
...|+|+||+|+.+|+.++|+.||.+|+|+|++|.+|-|+||+|++.||.|||++||.. ++|+. ..|.+|.|+|.
T Consensus 337 -sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~s--LtD~DgSTAl~- 412 (452)
T KOG0514|consen 337 -SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDIS--LTDVDGSTALS- 412 (452)
T ss_pred -hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccce--eecCCCchhhh-
Confidence 67899999999999999999999999999999999999999999999999999999976 47888 89999999999
Q ss_pred HhhhcCCHHHHHHHhhC
Q 010439 161 LAPQLMSRKIWVVVIPC 177 (510)
Q Consensus 161 ~A~~~~~~~~~~~Ll~~ 177 (510)
+|...|+.+|.-+|-.+
T Consensus 413 IAleagh~eIa~mlYa~ 429 (452)
T KOG0514|consen 413 IALEAGHREIAVMLYAH 429 (452)
T ss_pred hHHhcCchHHHHHHHHH
Confidence 99999999999887644
No 36
>PHA02795 ankyrin-like protein; Provisional
Probab=99.93 E-value=1.5e-25 Score=223.84 Aligned_cols=181 Identities=12% Similarity=-0.038 Sum_probs=164.3
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCc------ccCCCCChHHHHHHH--hCCcHHHHHHHHHcCCCcc
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLE------WMDKEGKTPLIVACM--DSGLINVAKTLIELGANIN 78 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~d~~g~TpL~~A~~--~~~~~~~v~~Ll~~ga~~n 78 (510)
+.+++....+| +|+..+..+++++|+++|+++| .++..++|+||+++. . |+.++|++|+++|||++
T Consensus 72 ~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~-n~~eiV~~LI~~GADIn 145 (437)
T PHA02795 72 RDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAY-VEIDIVDFMVDHGAVIY 145 (437)
T ss_pred Ccchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcC-CCHHHHHHHHHCCCCCC
Confidence 45666666666 8999999999999999999999 788899999999998 6 89999999999999999
Q ss_pred ccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccC------CCCCCcHHHHHHHcCCHHHHHHHHhcccccccccccc
Q 010439 79 AYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR------NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF 152 (510)
Q Consensus 79 ~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~------d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~ 152 (510)
.. .+.||||+|+..++.+++++|+++|++.... +..|.|++|.|...++.+++++|+++|++++ .+|.
T Consensus 146 ~~----~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN--~kD~ 219 (437)
T PHA02795 146 KI----ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN--QLDA 219 (437)
T ss_pred CC----CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcC--cCCC
Confidence 75 4589999999999999999999999854322 2357899999999999999999999999999 8999
Q ss_pred CCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccC
Q 010439 153 YGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (510)
Q Consensus 153 ~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~ 200 (510)
.|.|||| +|+..|+.+++++|+++|++++.++..|.+|++.|+..+.
T Consensus 220 ~G~TpLh-~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 220 GGRTLLY-RAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred CCCCHHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 9999999 9999999999999999999999999999999999988774
No 37
>PHA02730 ankyrin-like protein; Provisional
Probab=99.93 E-value=5e-25 Score=230.08 Aligned_cols=198 Identities=17% Similarity=0.088 Sum_probs=164.5
Q ss_pred Chh-hhcCCchHHHHHHHHcC---CHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC-CcHHHHHHHHHcCCCc--cccC
Q 010439 9 NQH-QQRQSKDELLYQWVIAG---DVDAIRALRSQGASLEWMDKEGKTPLIVACMDS-GLINVAKTLIELGANI--NAYR 81 (510)
Q Consensus 9 ~~~-~~~~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~-~~~~~v~~Ll~~ga~~--n~~~ 81 (510)
++| .+|..|+||||+|+..| +.++|++||++||+++.+|..|+||||+|+..+ ++.++|++|+++|++. +..
T Consensus 32 ~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~- 110 (672)
T PHA02730 32 NLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT- 110 (672)
T ss_pred chhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc-
Confidence 555 77889999999999997 599999999999999999999999999999862 3799999999997655 655
Q ss_pred CCCCCChHHHHHHH--cCCHHHHHHHHH-CCCCCccCCC-----CCCcHHHHHHHcCCHHHHHHHHhcccccccc-----
Q 010439 82 PGGRGGTPLHHAAK--RGLEPTVRLLLS-CGANALVRND-----DCHTALGVARIKGHINVVRAIESHICYFCGW----- 148 (510)
Q Consensus 82 ~d~~g~TpLh~A~~--~g~~~~v~~Ll~-~gad~~~~d~-----~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~----- 148 (510)
+..+.+|||.++. +++.++|++|+. .++|++...+ .|.+|++++...++.++|++|+++|+++++.
T Consensus 111 -~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~ 189 (672)
T PHA02730 111 -SNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSC 189 (672)
T ss_pred -cccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccc
Confidence 7779999999998 899999999996 6788876643 7899999999999999999999999999642
Q ss_pred ccccCCCC-HHHHHh------hhcCCHHHHHHHhhCCCCCCCCCccccccccc--cccccChHHHHHHHH
Q 010439 149 LREFYGPS-FLEALA------PQLMSRKIWVVVIPCGTANPSKPLRFELVIYP--SLQDVQPRAVIALWK 209 (510)
Q Consensus 149 ~~d~~g~t-~L~~~A------~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~--a~~~~~~~~i~~l~~ 209 (510)
..+..+.+ .|| +. ...+..|++++|+++|++++.++..|++|++. +....+...+..|+.
T Consensus 190 ~~~~~~c~~~l~-~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~ 258 (672)
T PHA02730 190 MYDSDRCKNSLH-YYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIK 258 (672)
T ss_pred cccCCccchhHH-HHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHh
Confidence 23444444 444 22 56788999999999999999999999999984 444455555555444
No 38
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.93 E-value=4.5e-25 Score=244.68 Aligned_cols=167 Identities=15% Similarity=0.149 Sum_probs=156.9
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A 93 (510)
+.++.++||.||..|+.++++.|+++|+|+|..|..|.||||+|+.+ |+.+++++|+++|+++|.+ |..|+||||+|
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~-g~~~~v~~Ll~~gadin~~--d~~G~TpL~~A 598 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASK-GYEDCVLVLLKHACNVHIR--DANGNTALWNA 598 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-ChHHHHHHHHhcCCCCCCc--CCCCCCHHHHH
Confidence 45678999999999999999999999999999999999999999998 9999999999999999998 89999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHH
Q 010439 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (510)
Q Consensus 94 ~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~ 173 (510)
+..|+.+++++|++.++..+ ...|.++||.|+.+|+.+++++|+++|++++ .+|.+|.|||| +|+..|+.+++++
T Consensus 599 ~~~g~~~iv~~L~~~~~~~~--~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin--~~d~~G~TpLh-~A~~~g~~~iv~~ 673 (823)
T PLN03192 599 ISAKHHKIFRILYHFASISD--PHAAGDLLCTAAKRNDLTAMKELLKQGLNVD--SEDHQGATALQ-VAMAEDHVDMVRL 673 (823)
T ss_pred HHhCCHHHHHHHHhcCcccC--cccCchHHHHHHHhCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHCCcHHHHHH
Confidence 99999999999999887654 3457799999999999999999999999999 89999999999 9999999999999
Q ss_pred HhhCCCCCCCCCccc
Q 010439 174 VIPCGTANPSKPLRF 188 (510)
Q Consensus 174 Ll~~ga~~~~~~~~~ 188 (510)
|+++|++++..+..+
T Consensus 674 Ll~~GAdv~~~~~~g 688 (823)
T PLN03192 674 LIMNGADVDKANTDD 688 (823)
T ss_pred HHHcCCCCCCCCCCC
Confidence 999999998887554
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92 E-value=2.4e-25 Score=194.43 Aligned_cols=180 Identities=19% Similarity=0.146 Sum_probs=149.3
Q ss_pred hcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHH
Q 010439 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (510)
Q Consensus 13 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~ 92 (510)
.+.+|+++++.|+-.|+...+..+|.+|+..|..+.-+++|+++++.+ .+.+.+.+|.+. .+|.. |..|.|||+|
T Consensus 92 t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhq-l~L~~~~~~~~n--~VN~~--De~GfTpLiW 166 (296)
T KOG0502|consen 92 TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQ-LHLDVVDLLVNN--KVNAC--DEFGFTPLIW 166 (296)
T ss_pred CCchhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHH-HHHHHHHHHhhc--cccCc--cccCchHhHH
Confidence 466688888888888888888888888888888888888888888877 677776666655 46666 8888888888
Q ss_pred HHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHH
Q 010439 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (510)
Q Consensus 93 A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~ 172 (510)
|+.+|++.+|++||+.|+|+++..+...|+|++|...|..+||++||.++.|+| ..|.+|-|||. +|++.|+.+|++
T Consensus 167 Aaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVN--vyDwNGgTpLl-yAvrgnhvkcve 243 (296)
T KOG0502|consen 167 AAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVN--VYDWNGGTPLL-YAVRGNHVKCVE 243 (296)
T ss_pred HHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcc--eeccCCCceee-eeecCChHHHHH
Confidence 888888888888888888888888888888888888888888888888888888 88888888888 888888888888
Q ss_pred HHhhCCCCCCCCCccccccccccccccC
Q 010439 173 VVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (510)
Q Consensus 173 ~Ll~~ga~~~~~~~~~~~~l~~a~~~~~ 200 (510)
.||..|++++..+..|..++..++.-+.
T Consensus 244 ~Ll~sGAd~t~e~dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 244 SLLNSGADVTQEDDSGYWIMDLAVALGY 271 (296)
T ss_pred HHHhcCCCcccccccCCcHHHHHHHhhh
Confidence 8888888888888788777776665444
No 40
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.92 E-value=2.8e-24 Score=192.06 Aligned_cols=145 Identities=19% Similarity=0.185 Sum_probs=119.5
Q ss_pred cccChhhhcCCchHHHHHHHHcCCH----HHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHH---HHHHHHHcCCCcc
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDV----DAIRALRSQGASLEWMDKEGKTPLIVACMDSGLIN---VAKTLIELGANIN 78 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~---~v~~Ll~~ga~~n 78 (510)
++++.+..+.++.++||+|++.|++ +++++|++.|++++.+|..|+||||+|+.. |+.+ ++++|+++|+++|
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~-g~~~~~~~i~~Ll~~Gadin 87 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWY-DRANAVMKIELLVNMGADIN 87 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHh-CccCHHHHHHHHHHcCCCCC
Confidence 4566667778888889999998888 566677788888888888899999999887 6544 4788899999998
Q ss_pred ccCCC-CCCChHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCC
Q 010439 79 AYRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGP 155 (510)
Q Consensus 79 ~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~ 155 (510)
.+ + ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++ .++..|.
T Consensus 88 ~~--d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~--~~~~~~~ 162 (166)
T PHA02743 88 AR--ELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCD--DPLSIGL 162 (166)
T ss_pred CC--CCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--CcccCCc
Confidence 87 6 478899999999999999999885 788888888899999999999999999999999998888 5665553
No 41
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91 E-value=1.6e-24 Score=234.64 Aligned_cols=222 Identities=23% Similarity=0.178 Sum_probs=171.1
Q ss_pred ccChhhhcCCchHHHHHHHHcC-CHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAG-DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g-~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
+.+.+..+..|.|+||+|+..| ..++...+++.|+++|..-..|.||||+|+.. |+.+++++|++.++..+.. ...
T Consensus 430 gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~-Gh~~~~~llle~~~~~~~~--~~~ 506 (1143)
T KOG4177|consen 430 GASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQE-GHTEVVQLLLEGGANDNLD--AKK 506 (1143)
T ss_pred CCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhcc-CCchHHHHhhhcCCccCcc--chh
Confidence 4556666777777777777777 66666677777777777777777777777765 7777777777777666654 566
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhc
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~ 165 (510)
|.|+||.|...+...+++.++++|++++.++..|+||||.|+.+|+..+|++|+++|++++ .+++.|+|||| .|+..
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~--ak~~~G~TPLH-~Aa~~ 583 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN--AKDKLGYTPLH-QAAQQ 583 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCcccc--ccCCCCCChhh-HHHHc
Confidence 7777777777777777777778888889999999999999999999999999999999999 89999999999 99999
Q ss_pred CCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehh
Q 010439 166 MSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (510)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~ 239 (510)
|+.+|+.+|+++|+++|..+..+.++++.+...++......+....... ...........|.+|..+.-
T Consensus 584 G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~-----~~~~~~~e~~~g~~p~~v~e 652 (1143)
T KOG4177|consen 584 GHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATP-----AATDPVKENRKGAVPEDVAE 652 (1143)
T ss_pred ChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCcc-----ccccchhhhhcccChhhHHH
Confidence 9999999999999999999999999999999888876665543332211 11112334445666766555
No 42
>PHA02730 ankyrin-like protein; Provisional
Probab=99.91 E-value=1e-23 Score=220.31 Aligned_cols=186 Identities=13% Similarity=0.107 Sum_probs=158.5
Q ss_pred cccChhhhcCCchHHHHH--HHHcCCHHHHHHHHH--------------------------------cCCCCcc------
Q 010439 6 NSMNQHQQRQSKDELLYQ--WVIAGDVDAIRALRS--------------------------------QGASLEW------ 45 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~--A~~~g~~~~v~~Ll~--------------------------------~g~~~~~------ 45 (510)
.++++|.+|.+|.||||+ |...|+.|+|++|++ +|+|+..
T Consensus 224 ~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~ 303 (672)
T PHA02730 224 NNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIE 303 (672)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhh
Confidence 468899999999999995 555678999999999 7888876
Q ss_pred --------------cCCCCCh---------------------HHHHHHHhC--CcHHHHHHHHHcCCCccccCCCCCCCh
Q 010439 46 --------------MDKEGKT---------------------PLIVACMDS--GLINVAKTLIELGANINAYRPGGRGGT 88 (510)
Q Consensus 46 --------------~d~~g~T---------------------pL~~A~~~~--~~~~~v~~Ll~~ga~~n~~~~d~~g~T 88 (510)
.|..|.+ .||.-...+ -+.+++++|+++||++|. +..|+|
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~---k~~G~T 380 (672)
T PHA02730 304 GRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDK---TTDNNY 380 (672)
T ss_pred ccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCc---CCCCCc
Confidence 5667765 677777653 368999999999999996 358999
Q ss_pred HHHHHHHcCC----HHHHHHHHHCCC--CCccCCCCCCcHHHH---HHHcC---------CHHHHHHHHhcccccccccc
Q 010439 89 PLHHAAKRGL----EPTVRLLLSCGA--NALVRNDDCHTALGV---ARIKG---------HINVVRAIESHICYFCGWLR 150 (510)
Q Consensus 89 pLh~A~~~g~----~~~v~~Ll~~ga--d~~~~d~~g~TpL~~---A~~~g---------~~~~v~~Ll~~ga~~~~~~~ 150 (510)
|||+|+..++ .+++++|+++|+ +++.+|..|.||||. |...+ ..+++++|+++|++++ .+
T Consensus 381 pLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADIN--ak 458 (672)
T PHA02730 381 PLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDID--MI 458 (672)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchh--cc
Confidence 9999998875 899999999997 689999999999984 33232 2357999999999999 99
Q ss_pred ccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCc-ccccccccccc
Q 010439 151 EFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPL-RFELVIYPSLQ 197 (510)
Q Consensus 151 d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~-~~~~~l~~a~~ 197 (510)
|..|.|||| +|+..++.+++++|+++|++++.++. .+.++++.+..
T Consensus 459 D~~G~TPLh-~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 459 DNENKTLLY-YAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred CCCCCCHHH-HHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHH
Confidence 999999999 99999999999999999999999996 58899988765
No 43
>PHA02792 ankyrin-like protein; Provisional
Probab=99.91 E-value=2.8e-24 Score=222.16 Aligned_cols=217 Identities=14% Similarity=0.025 Sum_probs=167.5
Q ss_pred cccChhhhcCCchHHHHHHHH-cCCHHHHHHHHHcCCCC------------------------------------cccCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVI-AGDVDAIRALRSQGASL------------------------------------EWMDK 48 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~g~~~------------------------------------~~~d~ 48 (510)
+++++|.++..|.++||+|+. .++.++|++||++|+++ |..|.
T Consensus 94 ~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 173 (631)
T PHA02792 94 KGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDR 173 (631)
T ss_pred cCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCC
Confidence 467888888888888888865 68889999999888763 23456
Q ss_pred CCChHHHHHHHhCC-------cHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcC--CHHHHHHHHH------------
Q 010439 49 EGKTPLIVACMDSG-------LINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG--LEPTVRLLLS------------ 107 (510)
Q Consensus 49 ~g~TpL~~A~~~~~-------~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g--~~~~v~~Ll~------------ 107 (510)
.|.||||+|+.. + +.+++++|+.+|++++.+ |..|.||||+|+.+. ..+++++|+.
T Consensus 174 ~g~t~L~~~i~~-~s~~~~~~~~~v~k~Li~~g~~~~~~--d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l 250 (631)
T PHA02792 174 MGKTVLYYYIIT-RSQDGYATSLDVINYLISHEKEMRYY--TYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNIL 250 (631)
T ss_pred CCCchHHHHHhh-CCcccccCCHHHHHHHHhCCCCcCcc--CCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHH
Confidence 688899998886 6 688899999999888887 778889999988766 4555555543
Q ss_pred -------------------------------------------------------------------------------C
Q 010439 108 -------------------------------------------------------------------------------C 108 (510)
Q Consensus 108 -------------------------------------------------------------------------------~ 108 (510)
+
T Consensus 251 ~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~ 330 (631)
T PHA02792 251 SNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDE 330 (631)
T ss_pred HHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHC
Confidence 2
Q ss_pred CCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCC--CCHHHHHhhhcCCH---HHHHHHhhCCCCCCC
Q 010439 109 GANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG--PSFLEALAPQLMSR---KIWVVVIPCGTANPS 183 (510)
Q Consensus 109 gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g--~t~L~~~A~~~~~~---~~~~~Ll~~ga~~~~ 183 (510)
|+++. ...+...++.|+..|+.++|++|+++|++++ .+|.+| .|||| +|...... +++++|+++|++++.
T Consensus 331 Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN--~kD~~g~~~TpLh-~A~~n~~~~v~~IlklLIs~GADIN~ 405 (631)
T PHA02792 331 GATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVV--EDDDNIINIMPLF-PTLSIHESDVLSILKLCKPYIDDINK 405 (631)
T ss_pred CCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchh--hhcCCCCChhHHH-HHHHhccHhHHHHHHHHHhcCCcccc
Confidence 22221 1234567888888999999999999999998 777775 68999 77665554 467888999999999
Q ss_pred CCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhc
Q 010439 184 KPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (510)
Q Consensus 184 ~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~ 240 (510)
++..+.+|++.++..+....+..|+ .+|++ ++.+|..|+|++++|..
T Consensus 406 kD~~G~TPLh~Aa~~~n~eivelLL--------s~GAD--IN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 406 IDKHGRSILYYCIESHSVSLVEWLI--------DNGAD--INITTKYGSTCIGICVI 452 (631)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHH--------HCCCC--CCCcCCCCCCHHHHHHH
Confidence 9999999999999887765554433 34567 88899999999999873
No 44
>PHA02917 ankyrin-like protein; Provisional
Probab=99.91 E-value=8.6e-24 Score=226.27 Aligned_cols=204 Identities=13% Similarity=0.056 Sum_probs=163.1
Q ss_pred HHHHHHHHHcCCCCcccCCCCChHHHHHHHh--CCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHH----HHH
Q 010439 30 VDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP----TVR 103 (510)
Q Consensus 30 ~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~--~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~----~v~ 103 (510)
++.||.||.+|..++.+|.+|+||||+|+.. .|+.++|++||++|++++.. +..|+||||+|+..|+.+ +++
T Consensus 12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~--~~~g~TpL~~Aa~~g~~~v~~~~~~ 89 (661)
T PHA02917 12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHK--NWRQLTPLEEYTNSRHVKVNKDIAM 89 (661)
T ss_pred HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCcccc--CCCCCCHHHHHHHcCChhHHHHHHH
Confidence 5788999999999999999999999998553 26799999999999999987 899999999999999854 567
Q ss_pred HHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHH-hhhcCCHHHHHHHhhCCCCCC
Q 010439 104 LLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEAL-APQLMSRKIWVVVIPCGTANP 182 (510)
Q Consensus 104 ~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~-A~~~~~~~~~~~Ll~~ga~~~ 182 (510)
+|++.+..++..+. .+++|+|+.+++.++|++|+++|++++ .+|.+|+||||.+ |+..++.+++++|+++|++++
T Consensus 90 ~Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin--~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn 165 (661)
T PHA02917 90 ALLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDLS--VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL 165 (661)
T ss_pred HHHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCCC--ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc
Confidence 88887554555443 377888999999999999999999999 8999999999932 346789999999999999998
Q ss_pred CCCcc---c-----------ccccccccc-----------ccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeee
Q 010439 183 SKPLR---F-----------ELVIYPSLQ-----------DVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKF 237 (510)
Q Consensus 183 ~~~~~---~-----------~~~l~~a~~-----------~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~ 237 (510)
.++.. | .++++.+.. ..+.. .++.++.+|++ ++..|..|.||||+
T Consensus 166 ~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~e--------iv~~Li~~Gad--vn~~d~~G~TpLh~ 235 (661)
T PHA02917 166 YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPE--------VVKCLINHGIK--PSSIDKNYCTALQY 235 (661)
T ss_pred ccccccccccccccccccccccHHHHHHhhcccccccccccCcHH--------HHHHHHHCCCC--cccCCCCCCcHHHH
Confidence 65432 2 477777653 12322 23334455777 89999999999999
Q ss_pred hhcCCC---ChHHHH
Q 010439 238 ASANEG---DKHQLQ 249 (510)
Q Consensus 238 a~~~~~---~~~ql~ 249 (510)
|+.+.. +.++++
T Consensus 236 A~~~g~~~~eivk~L 250 (661)
T PHA02917 236 YIKSSHIDIDIVKLL 250 (661)
T ss_pred HHHcCCCcHHHHHHH
Confidence 996554 344444
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.91 E-value=7.7e-25 Score=236.99 Aligned_cols=219 Identities=24% Similarity=0.212 Sum_probs=193.4
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCC-cHHHHHHHHHcCCCccccCCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG-LINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~-~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
.+.+++.++.+|.||||.|+..++..+|+.++++|++++..+..|+||+|+|+.. | ..+++..++..|+++|+. ..
T Consensus 396 ~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~-g~~~~~~~~l~~~g~~~n~~--s~ 472 (1143)
T KOG4177|consen 396 AGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKK-GRYLQIARLLLQYGADPNAV--SK 472 (1143)
T ss_pred ccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhc-ccHhhhhhhHhhcCCCcchh--cc
Confidence 3556778888888888888888888888888888888888888889999999887 6 788888888899999888 77
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
.|.||||+|+..|+.+++.+|++.++..+.....|.|+||+|...++..+++.++++|++++ .++.+|.|||| .|+.
T Consensus 473 ~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~--~~~~r~~TpLh-~A~~ 549 (1143)
T KOG4177|consen 473 QGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVD--LRTGRGYTPLH-VAVH 549 (1143)
T ss_pred ccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCcee--hhcccccchHH-HHHh
Confidence 88999999999999999999998888888888888999999999999999999999999999 89999999999 9999
Q ss_pred cCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhc
Q 010439 165 LMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASA 240 (510)
Q Consensus 165 ~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~ 240 (510)
+|+.++|++|+++|+|++.++..+.+|++.++..++...+..|++. |++ ++..|-.+.|||+++..
T Consensus 550 ~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~--------GA~--vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH--------GAS--VNAADLDGFTPLHIAVR 615 (1143)
T ss_pred cCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc--------CCC--CCcccccCcchhHHHHH
Confidence 9999999999999999999999999999999999986666654444 446 88889999999999993
No 46
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91 E-value=9.9e-25 Score=190.62 Aligned_cols=174 Identities=24% Similarity=0.171 Sum_probs=157.2
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
|+...|..+..+++|+++++.+.+++++..+.+. .+|..|++|.|||++|+.+ |++.+|++||+.|||+++. .+.
T Consensus 118 N~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De~GfTpLiWAaa~-G~i~vV~fLL~~GAdp~~l--gk~ 192 (296)
T KOG0502|consen 118 NGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDEFGFTPLIWAAAK-GHIPVVQFLLNSGADPDAL--GKY 192 (296)
T ss_pred ccccCCccccccCChhhHHHHHHHHHHHHHHhhc--cccCccccCchHhHHHHhc-CchHHHHHHHHcCCChhhh--hhh
Confidence 4455677788899999999999999988777664 5788999999999999998 9999999999999999998 788
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhc
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQL 165 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~ 165 (510)
..|+|++|++.|..+||++||.++.|+|..|-+|-|||.||++.+|.++++.|++.|++++ ..+..|.+++. +|+..
T Consensus 193 resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t--~e~dsGy~~md-lAVal 269 (296)
T KOG0502|consen 193 RESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVT--QEDDSGYWIMD-LAVAL 269 (296)
T ss_pred hhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcc--cccccCCcHHH-HHHHh
Confidence 8899999999999999999999999999999999999999999999999999999999999 89999999999 99999
Q ss_pred CCHHHHHHHhhCCCCCCCCCccc
Q 010439 166 MSRKIWVVVIPCGTANPSKPLRF 188 (510)
Q Consensus 166 ~~~~~~~~Ll~~ga~~~~~~~~~ 188 (510)
|+. +++..|++.+....++...
T Consensus 270 Gyr-~Vqqvie~h~lkl~Q~~~~ 291 (296)
T KOG0502|consen 270 GYR-IVQQVIEKHALKLCQDSEK 291 (296)
T ss_pred hhH-HHHHHHHHHHHHHhhcccC
Confidence 998 8888887776665555333
No 47
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90 E-value=3.4e-24 Score=217.40 Aligned_cols=220 Identities=23% Similarity=0.184 Sum_probs=191.7
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
...+.|.+|.+|.|+||.|+.+|+.+++++|++..+-++..|..|.+|||+|++. |+.+++++||.++..+|+. ...
T Consensus 38 rsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~-g~~e~vkmll~q~d~~na~--~~e 114 (854)
T KOG0507|consen 38 RSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWN-GNLEIVKMLLLQTDILNAV--NIE 114 (854)
T ss_pred CCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhc-CcchHHHHHHhcccCCCcc--ccc
Confidence 4456788899999999999999999999999999999999999999999999998 9999999999999999998 899
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc------ccccccCCCCHHH
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC------GWLREFYGPSFLE 159 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~------~~~~d~~g~t~L~ 159 (510)
|.||||.|+.+||.+++.+|+.+|+|+-.+|+.+.|+|.+|++.|..++|+.|+.....+. ...++..+-+|||
T Consensus 115 ~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plH 194 (854)
T KOG0507|consen 115 NETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLH 194 (854)
T ss_pred CcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcc
Confidence 9999999999999999999999999999999999999999999999999999998732221 1256777899999
Q ss_pred HHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehh
Q 010439 160 ALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (510)
Q Consensus 160 ~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~ 239 (510)
+|+++|+.++++.|++.|.+++... +..++++.+..-+....+..++...+ + ..+.+..++|.|++..
T Consensus 195 -laakngh~~~~~~ll~ag~din~~t-~~gtalheaalcgk~evvr~ll~~gi--------n--~h~~n~~~qtaldil~ 262 (854)
T KOG0507|consen 195 -LAAKNGHVECMQALLEAGFDINYTT-EDGTALHEAALCGKAEVVRFLLEIGI--------N--THIKNQHGQTALDIII 262 (854)
T ss_pred -hhhhcchHHHHHHHHhcCCCccccc-ccchhhhhHhhcCcchhhhHHHhhcc--------c--cccccccchHHHHHHH
Confidence 9999999999999999999999877 44577777776666555555454544 4 5677888889888777
Q ss_pred c
Q 010439 240 A 240 (510)
Q Consensus 240 ~ 240 (510)
.
T Consensus 263 d 263 (854)
T KOG0507|consen 263 D 263 (854)
T ss_pred h
Confidence 3
No 48
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.90 E-value=2.5e-23 Score=186.01 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=131.0
Q ss_pred cCCCCcccCCCCChHHHHHHHhCCcH----HHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHH---HHHHHHCCCC
Q 010439 39 QGASLEWMDKEGKTPLIVACMDSGLI----NVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPT---VRLLLSCGAN 111 (510)
Q Consensus 39 ~g~~~~~~d~~g~TpL~~A~~~~~~~----~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~---v~~Ll~~gad 111 (510)
+|++++..+.++.++||+||.. |+. +++++|++.|++++.+ |..|+||||+|+..|+.++ +++|+++|++
T Consensus 9 ~~~~~~~~~~~~~~~l~~a~~~-g~~~~l~~~~~~l~~~g~~~~~~--d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad 85 (166)
T PHA02743 9 NNLGAVEIDEDEQNTFLRICRT-GNIYELMEVAPFISGDGHLLHRY--DHHGRQCTHMVAWYDRANAVMKIELLVNMGAD 85 (166)
T ss_pred cchHHhhhccCCCcHHHHHHHc-CCHHHHHHHHHHHhhcchhhhcc--CCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence 5678888889999999999998 776 6677888999999988 8899999999999988654 8999999999
Q ss_pred CccCC-CCCCcHHHHHHHcCCHHHHHHHHh-ccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccc
Q 010439 112 ALVRN-DDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRF 188 (510)
Q Consensus 112 ~~~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~ 188 (510)
++.++ ..|+||||+|+..++.+++++|+. .|++++ .+|..|.|||| +|+..++.+++++|+++|++++.++..+
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~--~~d~~g~tpL~-~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 161 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG--AINYQHETAYH-IAYKMRDRRMMEILRANGAVCDDPLSIG 161 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc--CcCCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCCCcccCC
Confidence 99998 589999999999999999999995 899999 89999999999 9999999999999999999998887654
No 49
>PHA02741 hypothetical protein; Provisional
Probab=99.90 E-value=3.6e-23 Score=185.77 Aligned_cols=131 Identities=22% Similarity=0.276 Sum_probs=92.7
Q ss_pred hhhcCCchHHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCChHHHHHHHhCCc----HHHHHHHHHcCCCcccc
Q 010439 11 HQQRQSKDELLYQWVIAGDVDAIRALRS------QGASLEWMDKEGKTPLIVACMDSGL----INVAKTLIELGANINAY 80 (510)
Q Consensus 11 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~~~~~d~~g~TpL~~A~~~~~~----~~~v~~Ll~~ga~~n~~ 80 (510)
+.++..|.|+||+|+..|+.++|+.|+. .|++++.+|..|+||||+|+.. |+ .+++++|+++|+++|.+
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~-g~~~~~~~ii~~Ll~~gadin~~ 93 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEK-HEAQLAAEIIDHLIELGADINAQ 93 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHc-CChHHHHHHHHHHHHcCCCCCCC
Confidence 4556677777777777777777777643 2466777777777777777775 55 46777777777777766
Q ss_pred CCCC-CCChHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccc
Q 010439 81 RPGG-RGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICY 144 (510)
Q Consensus 81 ~~d~-~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~ 144 (510)
+. .|+||||+|+..++.+++++|+. .|++++.+|..|+||||+|+..++.+++++|++.++.
T Consensus 94 --~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 94 --EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred --CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence 53 67777777777777777777776 4777777777777777777777777777777766543
No 50
>PHA02792 ankyrin-like protein; Provisional
Probab=99.90 E-value=1e-22 Score=210.62 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=157.4
Q ss_pred ChhhhcCCchHHHHHHHHcC-------CHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCC--cHHHHHHHHH-------
Q 010439 9 NQHQQRQSKDELLYQWVIAG-------DVDAIRALRSQGASLEWMDKEGKTPLIVACMDSG--LINVAKTLIE------- 72 (510)
Q Consensus 9 ~~~~~~~~g~t~L~~A~~~g-------~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~--~~~~v~~Ll~------- 72 (510)
..+.++..|.||||+|+.++ +.++++.||++|++++.+|..|.||||+|+.+ . ..|++++|++
T Consensus 167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~-~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDK-CDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHc-ccchHHHHHHHHhccccccc
Confidence 34678889999999999999 89999999999999999999999999999987 5 5666666664
Q ss_pred --------------------------------------------------------------------------------
Q 010439 73 -------------------------------------------------------------------------------- 72 (510)
Q Consensus 73 -------------------------------------------------------------------------------- 72 (510)
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence
Q ss_pred ----cCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCC--CcHHHHHHHcCCH---HHHHHHHhccc
Q 010439 73 ----LGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDC--HTALGVARIKGHI---NVVRAIESHIC 143 (510)
Q Consensus 73 ----~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g--~TpL~~A~~~g~~---~~v~~Ll~~ga 143 (510)
+|++++ ...+...+|.|+..|+.++|++|+++|+|++.+|..| .||||+|...... +++++|+++|+
T Consensus 326 ~LId~Ga~~~----r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 326 CMIDEGATLY----RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHCCCccc----cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 233322 1125677999999999999999999999999999875 6999998876654 46899999999
Q ss_pred cccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCcccccccccccc
Q 010439 144 YFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQ 197 (510)
Q Consensus 144 ~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~ 197 (510)
+++ .+|..|.|||| +|+..++.+++++|+++|++++.++..+.++++.+..
T Consensus 402 DIN--~kD~~G~TPLh-~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 402 DIN--KIDKHGRSILY-YCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVI 452 (631)
T ss_pred ccc--cccccCcchHH-HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999 89999999999 9999999999999999999999999999999998864
No 51
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.89 E-value=8.6e-23 Score=226.50 Aligned_cols=151 Identities=21% Similarity=0.134 Sum_probs=141.0
Q ss_pred cccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 6 NSMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 6 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
.++++|.+|.+|.||||+|+..|+.++|++|+++|+++|.+|.+|.||||+|+.. |+.+++++|++.++..+ ...
T Consensus 547 ~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~-g~~~iv~~L~~~~~~~~----~~~ 621 (823)
T PLN03192 547 AKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISA-KHHKIFRILYHFASISD----PHA 621 (823)
T ss_pred CCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHh-CCHHHHHHHHhcCcccC----ccc
Confidence 3578889999999999999999999999999999999999999999999999997 99999999999887766 446
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCC-CCHHHHHhhh
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYG-PSFLEALAPQ 164 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g-~t~L~~~A~~ 164 (510)
|.++||+|+..|+.+++++|+++|+|++.+|.+|.||||+|+..|+.+++++|+++|++++ ..|..| .||+. ++..
T Consensus 622 ~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~--~~~~~g~~t~~~-l~~~ 698 (823)
T PLN03192 622 AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD--KANTDDDFSPTE-LREL 698 (823)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC--CCCCCCCCCHHH-HHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999 888888 99998 5533
No 52
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.89 E-value=1.9e-22 Score=194.16 Aligned_cols=157 Identities=22% Similarity=0.175 Sum_probs=135.7
Q ss_pred hhhhcCCchH-HHHHHHHcCCHHHHHHHHHcCCCCcccC----CCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCC
Q 010439 10 QHQQRQSKDE-LLYQWVIAGDVDAIRALRSQGASLEWMD----KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 10 ~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~~d----~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
...+|..|.| +||.|+..|+.++|++|+++|+++|.++ ..|.||||+|+.. ++.+++++|+++|||+|..+ +.
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~-~~~eivklLL~~GADVN~~~-~~ 102 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDC-DNDDAAKLLIRYGADVNRYA-EE 102 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcCccc-CC
Confidence 3456667665 5667777899999999999999999874 5899999999997 99999999999999999862 46
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
.|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++.+++.++... ..+..+.+|++ ++
T Consensus 103 ~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~~-- 172 (300)
T PHA02884 103 AKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN-------EISNFYKHPKK-IL-- 172 (300)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC-------cccccccChhh-hh--
Confidence 799999999999999999999999999999999999999999999999888666532 24567788998 44
Q ss_pred cCCHHHHHHHhhCCC
Q 010439 165 LMSRKIWVVVIPCGT 179 (510)
Q Consensus 165 ~~~~~~~~~Ll~~ga 179 (510)
++.+++++|+.++.
T Consensus 173 -~n~ei~~~Lish~v 186 (300)
T PHA02884 173 -INFDILKILVSHFI 186 (300)
T ss_pred -ccHHHHHHHHHHHH
Confidence 46899999999987
No 53
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88 E-value=9.3e-23 Score=200.58 Aligned_cols=174 Identities=28% Similarity=0.318 Sum_probs=132.0
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHH
Q 010439 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (510)
Q Consensus 21 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~ 100 (510)
+.-|+..|+.+-|+.||..|+++|..+.+|.|+||-+|.- .+.+||++|+++|++||.. |..||||||.|+..|+..
T Consensus 44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id-~~~e~v~~l~e~ga~Vn~~--d~e~wtPlhaaascg~~~ 120 (527)
T KOG0505|consen 44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACID-DNLEMVKFLVENGANVNAQ--DNEGWTPLHAAASCGYLN 120 (527)
T ss_pred HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhc-ccHHHHHHHHHhcCCcccc--ccccCCcchhhcccccHH
Confidence 3344455666666666666666666666666666666664 5666666666666666665 566666666666666666
Q ss_pred HHHHHHHCCCC-----------------------------------------------------------CccCCCCCCc
Q 010439 101 TVRLLLSCGAN-----------------------------------------------------------ALVRNDDCHT 121 (510)
Q Consensus 101 ~v~~Ll~~gad-----------------------------------------------------------~~~~d~~g~T 121 (510)
++++|+.+|++ .++.+..|-|
T Consensus 121 i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T 200 (527)
T KOG0505|consen 121 IVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGAT 200 (527)
T ss_pred HHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccch
Confidence 66666665543 3556667999
Q ss_pred HHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccC
Q 010439 122 ALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQ 200 (510)
Q Consensus 122 pL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~ 200 (510)
.||.|+.+|..++.++|+++|.+++ .+|.+|+|||| +|+.++..+.+++|+++|++++.....+++++-.+..+..
T Consensus 201 ~lHvAaa~Gy~e~~~lLl~ag~~~~--~~D~dgWtPlH-AAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee~~ 276 (527)
T KOG0505|consen 201 ALHVAAANGYTEVAALLLQAGYSVN--IKDYDGWTPLH-AAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEEEL 276 (527)
T ss_pred HHHHHHhhhHHHHHHHHHHhccCcc--cccccCCCccc-HHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhhhH
Confidence 9999999999999999999999999 99999999999 9999999999999999999999999999998877765433
No 54
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.88 E-value=3.7e-22 Score=220.14 Aligned_cols=225 Identities=16% Similarity=0.075 Sum_probs=169.1
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCChHHH-HHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHH
Q 010439 15 QSKDELLYQWVIAGDVDAIRALRSQ--GASLEWMDKEGKTPLI-VACMDSGLINVAKTLIELGANINAYRPGGRGGTPLH 91 (510)
Q Consensus 15 ~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~TpL~-~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh 91 (510)
..++..|+.|++.|+.+.|+.++++ +.++|..|..|+|||| .|+. +++.+++++|+++|+ . +..|.||||
T Consensus 15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~-~~~~eiv~lLl~~g~----~--~~~G~T~Lh 87 (743)
T TIGR00870 15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIE-NENLELTELLLNLSC----R--GAVGDTLLH 87 (743)
T ss_pred CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHh-cChHHHHHHHHhCCC----C--CCcChHHHH
Confidence 4678999999999999999999998 8999999999999999 5555 599999999999997 3 778999999
Q ss_pred HHHHcC---CHHHHHHHHHCCCC------Cc----cCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccc-------
Q 010439 92 HAAKRG---LEPTVRLLLSCGAN------AL----VRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLRE------- 151 (510)
Q Consensus 92 ~A~~~g---~~~~v~~Ll~~gad------~~----~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d------- 151 (510)
.|+..+ ...++.+++..+.+ ++ ..+..|.||||+|+.+|+.++|++|+++|++++ .++
T Consensus 88 ~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~--~~~~~~~~~~ 165 (743)
T TIGR00870 88 AISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP--ARACGDFFVK 165 (743)
T ss_pred HHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC--cCcCCchhhc
Confidence 999732 22334444444322 11 123569999999999999999999999999998 432
Q ss_pred -------cCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCccccccccccccccChHHH----HHHHHhhcCCCCCCCC
Q 010439 152 -------FYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPLRFELVIYPSLQDVQPRAV----IALWKAKIDEPKFHQP 220 (510)
Q Consensus 152 -------~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~l~~a~~~~~~~~i----~~l~~~~~~~~~~~~~ 220 (510)
..|.|||| +|+..++.+++++|+++|+|++.++..+.++++.+......... .......+........
T Consensus 166 ~~~~~~~~~g~tpL~-~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~ 244 (743)
T TIGR00870 166 SQGVDSFYHGESPLN-AAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLR 244 (743)
T ss_pred CCCCCcccccccHHH-HHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC
Confidence 35899999 99999999999999999999999999999999998876521110 0001111111111111
Q ss_pred --CCceEEecCCCcceeeehhcC-CCChHHHH
Q 010439 221 --DPSLTIYDQATKIRYKFASAN-EGDKHQLQ 249 (510)
Q Consensus 221 --~~~~~~~d~~~~t~l~~a~~~-~~~~~ql~ 249 (510)
....++.|+.|.|||++|+.. +.+..+++
T Consensus 245 ~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lL 276 (743)
T TIGR00870 245 DSKELEVILNHQGLTPLKLAAKEGRIVLFRLK 276 (743)
T ss_pred ChHhhhhhcCCCCCCchhhhhhcCCccHHHHH
Confidence 122367899999999999843 33444433
No 55
>PHA02741 hypothetical protein; Provisional
Probab=99.88 E-value=4.6e-22 Score=178.59 Aligned_cols=131 Identities=17% Similarity=0.109 Sum_probs=120.3
Q ss_pred cccCCCCChHHHHHHHhCCcHHHHHHHHH------cCCCccccCCCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCc
Q 010439 44 EWMDKEGKTPLIVACMDSGLINVAKTLIE------LGANINAYRPGGRGGTPLHHAAKRGL----EPTVRLLLSCGANAL 113 (510)
Q Consensus 44 ~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~------~ga~~n~~~~d~~g~TpLh~A~~~g~----~~~v~~Ll~~gad~~ 113 (510)
+.+|..|.||||+|+.. |+.+++++|+. .|++++.+ |..|+||||+|+..|+ .+++++|+++|++++
T Consensus 15 ~~~~~~g~t~Lh~Aa~~-g~~~~v~~l~~~~~~~~~ga~in~~--d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin 91 (169)
T PHA02741 15 AEKNSEGENFFHEAARC-GCFDIIARFTPFIRGDCHAAALNAT--DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN 91 (169)
T ss_pred hccccCCCCHHHHHHHc-CCHHHHHHHHHHhccchhhhhhhcc--CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC
Confidence 45788999999999998 99999999864 36889988 8899999999999998 589999999999999
Q ss_pred cCCC-CCCcHHHHHHHcCCHHHHHHHHh-ccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCC
Q 010439 114 VRND-DCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTA 180 (510)
Q Consensus 114 ~~d~-~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~ 180 (510)
.++. .|+||||+|+..++.+++++|++ .|++++ .+|.+|.|||| +|...++.+++++|++.++.
T Consensus 92 ~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~--~~n~~g~tpL~-~A~~~~~~~iv~~L~~~~~~ 157 (169)
T PHA02741 92 AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH--FCNADNKSPFE-LAIDNEDVAMMQILREIVAT 157 (169)
T ss_pred CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC--cCCCCCCCHHH-HHHHCCCHHHHHHHHHHHHH
Confidence 9985 99999999999999999999997 599998 89999999999 99999999999999988754
No 56
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88 E-value=1.7e-22 Score=178.71 Aligned_cols=134 Identities=20% Similarity=0.156 Sum_probs=108.4
Q ss_pred cChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCC--C-----CcccCCCCChHHHHHHHhCCcH---HHHHHHHHcCCCc
Q 010439 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGA--S-----LEWMDKEGKTPLIVACMDSGLI---NVAKTLIELGANI 77 (510)
Q Consensus 8 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~-----~~~~d~~g~TpL~~A~~~~~~~---~~v~~Ll~~ga~~ 77 (510)
...+.+|.+|.||||+|++.|+.. ++++.++. + ++.+|..|+||||+|+.. ++. +++++|+++|+++
T Consensus 8 ~~~~~~d~~g~tpLh~A~~~g~~~--~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~-~~~~~~e~v~~Ll~~gadi 84 (154)
T PHA02736 8 IFASEPDIEGENILHYLCRNGGVT--DLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNP-DKADPQEKLKLLMEWGADI 84 (154)
T ss_pred hHHHhcCCCCCCHHHHHHHhCCHH--HHHHHHHHhcchhHHHHHHhcCCCCEEEEeeccc-CchhHHHHHHHHHHcCCCc
Confidence 345677888999999999999843 33332222 2 334688899999999987 665 4688899999999
Q ss_pred cccCCC-CCCChHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 78 NAYRPG-GRGGTPLHHAAKRGLEPTVRLLLS-CGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 78 n~~~~d-~~g~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
|.+ + ..|+||||+|+..|+.+++++|+. .|++++.+|..|.||||+|+..|+.+++++|+++|++.+
T Consensus 85 n~~--~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 85 NGK--ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred ccc--CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 987 6 489999999999999999999997 489999999999999999999999999999999988764
No 57
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86 E-value=6.7e-22 Score=185.11 Aligned_cols=160 Identities=18% Similarity=0.220 Sum_probs=143.2
Q ss_pred CCcccCCCCChHHHHHHHhCCcHHHHHHHHHcC-CCccccCCCCCCChHHHHHHHc-----CCHHHHHHHHHCCCCCccC
Q 010439 42 SLEWMDKEGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGRGGTPLHHAAKR-----GLEPTVRLLLSCGANALVR 115 (510)
Q Consensus 42 ~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~g-a~~n~~~~d~~g~TpLh~A~~~-----g~~~~v~~Ll~~gad~~~~ 115 (510)
-||.-|.+|+|+||||+.+ .++++|+.||+.| ++++.+ ++-|+||+|+++.. .+..+|..|+..| |+|++
T Consensus 260 vVNlaDsNGNTALHYsVSH-aNF~VV~~LLDSgvC~VD~q--NrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaK 335 (452)
T KOG0514|consen 260 VVNLADSNGNTALHYAVSH-ANFDVVSILLDSGVCDVDQQ--NRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAK 335 (452)
T ss_pred HhhhhcCCCCeeeeeeecc-cchHHHHHHhccCccccccc--ccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchh
Confidence 3688999999999999999 8999999999998 799998 99999999999863 4678899998885 67776
Q ss_pred C-CCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhC-CCCCCCCCcccccccc
Q 010439 116 N-DDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC-GTANPSKPLRFELVIY 193 (510)
Q Consensus 116 d-~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~-ga~~~~~~~~~~~~l~ 193 (510)
- ..|+|+||+|+..|+.++|+.||..|+|+| ++|.+|.|+|+ +|+.+|+.||+++||.. +.|....|..+.+++.
T Consensus 336 AsQ~gQTALMLAVSHGr~d~vk~LLacgAdVN--iQDdDGSTALM-CA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~ 412 (452)
T KOG0514|consen 336 ASQHGQTALMLAVSHGRVDMVKALLACGADVN--IQDDDGSTALM-CAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALS 412 (452)
T ss_pred hhhhcchhhhhhhhcCcHHHHHHHHHccCCCc--cccCCccHHHh-hhhhhChHHHHHHHhccCcccceeecCCCchhhh
Confidence 5 579999999999999999999999999999 99999999999 99999999999999864 6888899999999999
Q ss_pred ccccccChHHHHHHH
Q 010439 194 PSLQDVQPRAVIALW 208 (510)
Q Consensus 194 ~a~~~~~~~~i~~l~ 208 (510)
.+.+.++......++
T Consensus 413 IAleagh~eIa~mlY 427 (452)
T KOG0514|consen 413 IALEAGHREIAVMLY 427 (452)
T ss_pred hHHhcCchHHHHHHH
Confidence 999988866655443
No 58
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.86 E-value=2.7e-21 Score=213.29 Aligned_cols=197 Identities=15% Similarity=0.073 Sum_probs=157.6
Q ss_pred ccChhhhcCCchHHHH-HHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHh--CCcHHHHHHHHHcCCC------c
Q 010439 7 SMNQHQQRQSKDELLY-QWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMD--SGLINVAKTLIELGAN------I 77 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~--~~~~~~v~~Ll~~ga~------~ 77 (510)
+.++|..|..|.|||| .|+.+++.+++++|+++|+ .+..|.||||.|+.. ++...++++++..+.+ +
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~ 117 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELA 117 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhh
Confidence 5778888999999999 8889999999999999987 677899999999962 1222344444444422 1
Q ss_pred ccc--CCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCC--------------CCCCcHHHHHHHcCCHHHHHHHHhc
Q 010439 78 NAY--RPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN--------------DDCHTALGVARIKGHINVVRAIESH 141 (510)
Q Consensus 78 n~~--~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d--------------~~g~TpL~~A~~~g~~~~v~~Ll~~ 141 (510)
+.. +.+..|.||||+|+.+|+.++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++
T Consensus 118 ~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ 197 (743)
T TIGR00870 118 NDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSED 197 (743)
T ss_pred ccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcC
Confidence 111 113469999999999999999999999999998763 3589999999999999999999999
Q ss_pred cccccccccccCCCCHHHHHhhhcC---------CHHHHHHHhhCCCCC-------CCCCccccccccccccccChHHHH
Q 010439 142 ICYFCGWLREFYGPSFLEALAPQLM---------SRKIWVVVIPCGTAN-------PSKPLRFELVIYPSLQDVQPRAVI 205 (510)
Q Consensus 142 ga~~~~~~~d~~g~t~L~~~A~~~~---------~~~~~~~Ll~~ga~~-------~~~~~~~~~~l~~a~~~~~~~~i~ 205 (510)
|+|++ .+|..|+|||| +|+..+ ...+.++++..+++. +..+..+.+|++.+...++...+.
T Consensus 198 gadin--~~d~~g~T~Lh-~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~ 274 (743)
T TIGR00870 198 PADIL--TADSLGNTLLH-LLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFR 274 (743)
T ss_pred Ccchh--hHhhhhhHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHH
Confidence 99999 89999999999 888876 234566676666554 456778999999999998888777
Q ss_pred HHHHh
Q 010439 206 ALWKA 210 (510)
Q Consensus 206 ~l~~~ 210 (510)
.++..
T Consensus 275 lLL~~ 279 (743)
T TIGR00870 275 LKLAI 279 (743)
T ss_pred HHHHH
Confidence 66653
No 59
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.86 E-value=7e-21 Score=160.65 Aligned_cols=143 Identities=22% Similarity=0.218 Sum_probs=125.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHc
Q 010439 18 DELLYQWVIAGDVDAIRALRSQGA-SLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKR 96 (510)
Q Consensus 18 ~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~ 96 (510)
.-.+.+|+..+.+..|+.||+..+ .+|.+|.+|+||||-|+.+ |+.+||+.|+..||+++++ ...||||||-||+.
T Consensus 64 ~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn-~h~div~~ll~~gAn~~a~--T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 64 IRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYN-GHLDIVHELLLSGANKEAK--TNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhc-CchHHHHHHHHccCCcccc--cccCccchhhhhcc
Confidence 456889999999999999999876 4899999999999999997 9999999999999999999 89999999999999
Q ss_pred CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCH-HHHHHHH-hccccccccccccCCCCHHHHHhhhcC
Q 010439 97 GLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHI-NVVRAIE-SHICYFCGWLREFYGPSFLEALAPQLM 166 (510)
Q Consensus 97 g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~-~~v~~Ll-~~ga~~~~~~~d~~g~t~L~~~A~~~~ 166 (510)
.+.+++.+||.+|+|+|+.....+||||+|+...+. ..+++|+ ..+.+.. .++..+.||+. +|-+.+
T Consensus 141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg--~~nn~eeta~~-iARRT~ 209 (228)
T KOG0512|consen 141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPG--LKNNLEETAFD-IARRTS 209 (228)
T ss_pred cchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChh--hhcCccchHHH-HHHHhh
Confidence 999999999999999999999999999999987665 4455554 4445555 78889999999 776543
No 60
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.86 E-value=1.9e-21 Score=171.98 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=113.0
Q ss_pred CcccCCCCChHHHHHHHhCCcHHHHHHHHHcCC--C-----ccccCCCCCCChHHHHHHHcCCH---HHHHHHHHCCCCC
Q 010439 43 LEWMDKEGKTPLIVACMDSGLINVAKTLIELGA--N-----INAYRPGGRGGTPLHHAAKRGLE---PTVRLLLSCGANA 112 (510)
Q Consensus 43 ~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga--~-----~n~~~~d~~g~TpLh~A~~~g~~---~~v~~Ll~~gad~ 112 (510)
.+..|..|.||||+||.. |+ ++.+|+..+. + ++.+ |..|+||||+|+..|+. +++++|+++|+++
T Consensus 10 ~~~~d~~g~tpLh~A~~~-g~--~~~l~~~~~~~~~~~~~~~~~~--d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadi 84 (154)
T PHA02736 10 ASEPDIEGENILHYLCRN-GG--VTDLLAFKNAISDENRYLVLEY--NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADI 84 (154)
T ss_pred HHhcCCCCCCHHHHHHHh-CC--HHHHHHHHHHhcchhHHHHHHh--cCCCCEEEEeecccCchhHHHHHHHHHHcCCCc
Confidence 355788999999999998 76 3444443332 2 2234 78999999999999987 4689999999999
Q ss_pred ccCC-CCCCcHHHHHHHcCCHHHHHHHHh-ccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCC
Q 010439 113 LVRN-DDCHTALGVARIKGHINVVRAIES-HICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANP 182 (510)
Q Consensus 113 ~~~d-~~g~TpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~ 182 (510)
+.++ ..|+||||+|+..|+.+++++|+. .|++++ .+|..|.|||| +|+..++.+++++|+.+|++.+
T Consensus 85 n~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n--~~~~~g~tpL~-~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 85 NGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME--ILNYAFKTPYY-VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred cccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc--cccCCCCCHHH-HHHHcCCHHHHHHHHHcCCCCC
Confidence 9998 499999999999999999999998 499999 89999999999 9999999999999999998764
No 61
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.84 E-value=3.1e-20 Score=178.85 Aligned_cols=131 Identities=15% Similarity=0.151 Sum_probs=115.4
Q ss_pred cccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCC--CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCC-CCCC
Q 010439 44 EWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRP--GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRN-DDCH 120 (510)
Q Consensus 44 ~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~--d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d-~~g~ 120 (510)
..+|+.|.|++++++...|+.+++++|+++|+++|.++. +..|.||||+|+..++.+++++|+++|+|++.++ ..|.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~ 105 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKI 105 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCC
Confidence 347888888766555555899999999999999998731 4589999999999999999999999999999864 6899
Q ss_pred cHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhC
Q 010439 121 TALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (510)
Q Consensus 121 TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ 177 (510)
||||+|+..++.+++++|+++|++++ .+|..|.|||| +|+..++.+++.++...
T Consensus 106 TpLh~Aa~~~~~eivklLL~~GAdin--~kd~~G~TpL~-~A~~~~~~~~~~~~~~~ 159 (300)
T PHA02884 106 TPLYISVLHGCLKCLEILLSYGADIN--IQTNDMVTPIE-LALMICNNFLAFMICDN 159 (300)
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCCHHH-HHHHhCChhHHHHhcCC
Confidence 99999999999999999999999999 89999999999 99998888887666533
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.84 E-value=5.8e-21 Score=188.01 Aligned_cols=154 Identities=27% Similarity=0.325 Sum_probs=142.3
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccC-----
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR----- 81 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~----- 81 (510)
+.+++..+.+|.|+||.++...+.++|++|+++|++||..|..|+||||.|+.- |+..++++|+.+|+++-...
T Consensus 63 ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaasc-g~~~i~~~li~~gA~~~avNsdg~~ 141 (527)
T KOG0505|consen 63 GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASC-GYLNIVEYLIQHGANLLAVNSDGNM 141 (527)
T ss_pred CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhccc-ccHHHHHHHHHhhhhhhhccCCCCC
Confidence 456788899999999999999999999999999999999999999999999986 99999999999998866542
Q ss_pred ----------------------------------------------------CCCCCChHHHHHHHcCCHHHHHHHHHCC
Q 010439 82 ----------------------------------------------------PGGRGGTPLHHAAKRGLEPTVRLLLSCG 109 (510)
Q Consensus 82 ----------------------------------------------------~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 109 (510)
++..|.|+||.|+.+|..++.++|+.+|
T Consensus 142 P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag 221 (527)
T KOG0505|consen 142 PYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAG 221 (527)
T ss_pred ccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhc
Confidence 1223899999999999999999999999
Q ss_pred CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 110 ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 110 ad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
.+++++|.+||||||.|+..|+.++.++|+++|++++ .....|.||+. +|..
T Consensus 222 ~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d--~~t~~g~~p~d-v~de 273 (527)
T KOG0505|consen 222 YSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMD--AKTKMGETPLD-VADE 273 (527)
T ss_pred cCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccc--hhhhcCCCCcc-chhh
Confidence 9999999999999999999999999999999999999 89999999999 6654
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.82 E-value=9.2e-20 Score=185.45 Aligned_cols=208 Identities=22% Similarity=0.198 Sum_probs=180.3
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcC-------------CCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCC
Q 010439 18 DELLYQWVIAGDVDAIRALRSQG-------------ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGG 84 (510)
Q Consensus 18 ~t~L~~A~~~g~~~~v~~Ll~~g-------------~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~ 84 (510)
.+-|..|++.|+++.|..||+.. ..+|..|.+|.|+||+|+.+ |+.+++++|+++.+-++.. |.
T Consensus 4 ~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Ln-g~~~is~llle~ea~ldl~--d~ 80 (854)
T KOG0507|consen 4 KQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLN-GQNQISKLLLDYEALLDLC--DT 80 (854)
T ss_pred hhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhc-CchHHHHHHhcchhhhhhh--hc
Confidence 46688899999999999999841 34677889999999999998 9999999999999999998 89
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhh
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQ 164 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~ 164 (510)
.|.+|||+|+..|+.++++.||.++..+|+.+..|.||||.|+..||.++|.+|+++|++.. ++|..+.|+|. +|++
T Consensus 81 kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~--i~nns~~t~ld-lA~q 157 (854)
T KOG0507|consen 81 KGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPF--IRNNSKETVLD-LASR 157 (854)
T ss_pred cCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCcc--ccCcccccHHH-HHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 99999999999 9999
Q ss_pred cCCHHHHHHHhhCCCC--------CCCCCccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceee
Q 010439 165 LMSRKIWVVVIPCGTA--------NPSKPLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYK 236 (510)
Q Consensus 165 ~~~~~~~~~Ll~~ga~--------~~~~~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~ 236 (510)
.|..++++.|++...+ ...+++..-.++|.+.++++.+.+..++...+ + ++...+. -|+||
T Consensus 158 fgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~--------d--in~~t~~-gtalh 226 (854)
T KOG0507|consen 158 FGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF--------D--INYTTED-GTALH 226 (854)
T ss_pred hhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC--------C--ccccccc-chhhh
Confidence 9999999999876221 22455667889999999999888877665554 3 5554444 47888
Q ss_pred ehhcCC
Q 010439 237 FASANE 242 (510)
Q Consensus 237 ~a~~~~ 242 (510)
.|+.-.
T Consensus 227 eaalcg 232 (854)
T KOG0507|consen 227 EAALCG 232 (854)
T ss_pred hHhhcC
Confidence 887433
No 64
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2.3e-20 Score=169.59 Aligned_cols=155 Identities=23% Similarity=0.250 Sum_probs=123.6
Q ss_pred HHcCCHHHHHHHHH-cCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHH
Q 010439 25 VIAGDVDAIRALRS-QGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVR 103 (510)
Q Consensus 25 ~~~g~~~~v~~Ll~-~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~ 103 (510)
|+.|+.-.|++-|+ ..-|+|.-|..|.+|||+||+. |+..+++.||..|+.+|.. +....||||+|+.+||.++|+
T Consensus 8 cregna~qvrlwld~tehdln~gddhgfsplhwaake-gh~aivemll~rgarvn~t--nmgddtplhlaaahghrdivq 84 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKE-GHVAIVEMLLSRGARVNST--NMGDDTPLHLAAAHGHRDIVQ 84 (448)
T ss_pred hhcCCeEEEEEEecCcccccccccccCcchhhhhhhc-ccHHHHHHHHhcccccccc--cCCCCcchhhhhhcccHHHHH
Confidence 55666655654444 5567888888999999999986 8999999999999999987 666679999999999999999
Q ss_pred HHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCC
Q 010439 104 LLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPS 183 (510)
Q Consensus 104 ~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~ 183 (510)
.||+..+|+|+.|..|.|||||||..|+..+.+-|+..|+.++ +.+++|.|||. .|...-...+.++--+.|.+++.
T Consensus 85 kll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~--icnk~g~tpld-kakp~l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVN--ICNKKGMTPLD-KAKPMLKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred HHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceee--ecccCCCCchh-hhchHHHHHHHHHHHHhCCCCCc
Confidence 9999999999999999999999999999999999999999888 88999999998 55443333444444466766664
Q ss_pred CC
Q 010439 184 KP 185 (510)
Q Consensus 184 ~~ 185 (510)
.+
T Consensus 162 ip 163 (448)
T KOG0195|consen 162 IP 163 (448)
T ss_pred cc
Confidence 44
No 65
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1e-19 Score=165.41 Aligned_cols=136 Identities=25% Similarity=0.263 Sum_probs=122.4
Q ss_pred cChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCC
Q 010439 8 MNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGG 87 (510)
Q Consensus 8 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~ 87 (510)
-+.|.-|..|.+|||+|++.|+..+|+.||.+|+.+|..|.-..||||+|+.. ||.++|+.||+..+|+|+. +.+|.
T Consensus 25 hdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaah-ghrdivqkll~~kadvnav--nehgn 101 (448)
T KOG0195|consen 25 HDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH-GHRDIVQKLLSRKADVNAV--NEHGN 101 (448)
T ss_pred cccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc-ccHHHHHHHHHHhcccchh--hccCC
Confidence 34566788899999999999999999999999999999999999999999998 9999999999999999999 99999
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 88 TPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 88 TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
|||||||..|...+.+-|+..|+-+++.|++|.|||..|.-.-...+.+.-.++|.+++
T Consensus 102 tplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~gq~~n 160 (448)
T KOG0195|consen 102 TPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKHGQSPN 160 (448)
T ss_pred CchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999998865443444555556676665
No 66
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.80 E-value=4.1e-19 Score=150.00 Aligned_cols=147 Identities=21% Similarity=0.090 Sum_probs=124.0
Q ss_pred hHHHHHHHhCCcHHHHHHHHHcCCC-ccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q 010439 52 TPLIVACMDSGLINVAKTLIELGAN-INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG 130 (510)
Q Consensus 52 TpL~~A~~~~~~~~~v~~Ll~~ga~-~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g 130 (510)
--+.+|+.. +.+..|+.||+..++ +|.+ |.+|+||||.|+.+|+.+||+.|+..|++++.+...|+||||-|+..+
T Consensus 65 rl~lwaae~-nrl~eV~~lL~e~an~vNtr--D~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 65 RLLLWAAEK-NRLTEVQRLLSEKANHVNTR--DEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred HHHHHHHhh-ccHHHHHHHHHhcccccccc--ccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 346788887 889999999988775 7877 999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccccccccccccCCCCHHHHHhhhc-CCHHHHHHHh-hCCCCCCCCCccccccccccccccChHHH
Q 010439 131 HINVVRAIESHICYFCGWLREFYGPSFLEALAPQL-MSRKIWVVVI-PCGTANPSKPLRFELVIYPSLQDVQPRAV 204 (510)
Q Consensus 131 ~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~-~~~~~~~~Ll-~~ga~~~~~~~~~~~~l~~a~~~~~~~~i 204 (510)
+.+++.+||++|+|++ +......|||| +|+.. +....+.+|+ ..+.+...+...+++++..+-+.+....+
T Consensus 142 N~~va~~LLqhgaDVn--A~t~g~ltpLh-laa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~s~~l 214 (228)
T KOG0512|consen 142 NFEVAGRLLQHGADVN--AQTKGLLTPLH-LAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSMSHYL 214 (228)
T ss_pred chhHHHHHHhccCccc--ccccccchhhH-HhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhhhHHH
Confidence 9999999999999999 88888899999 66655 4455566655 56777777887888888777655443333
No 67
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.79 E-value=1e-18 Score=139.29 Aligned_cols=89 Identities=36% Similarity=0.517 Sum_probs=72.9
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHH
Q 010439 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEP 100 (510)
Q Consensus 21 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~ 100 (510)
||+|++.|+.+++++|++.+.+++. |.||||+|+.. |+.+++++|+++|++++.+ |..|+||||+|+.+|+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~-~~~~~~~~Ll~~g~~~~~~--~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAEN-GNLEIVKLLLENGADINSQ--DKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHT-TTHHHHHHHHHTTTCTT-B--STTSSBHHHHHHHTTHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHc-CCHHHHHHHHHhccccccc--CCCCCCHHHHHHHcCCHH
Confidence 7888888888888888888877766 78888888887 8888888888888888887 788888888888888888
Q ss_pred HHHHHHHCCCCCccCC
Q 010439 101 TVRLLLSCGANALVRN 116 (510)
Q Consensus 101 ~v~~Ll~~gad~~~~d 116 (510)
++++|+++|++++.+|
T Consensus 74 ~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 74 IVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHHHTTT-TTSS-
T ss_pred HHHHHHHcCCCCCCcC
Confidence 8888888888887765
No 68
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.77 E-value=7.1e-18 Score=142.71 Aligned_cols=124 Identities=34% Similarity=0.527 Sum_probs=104.3
Q ss_pred hcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHH
Q 010439 13 QRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHH 92 (510)
Q Consensus 13 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~ 92 (510)
++.+|.|+||+|+..|+.+++++|++++.+.+..+..|.||||+|+.. ++.+++++|++.|++++.. +..|.||+|+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~-~~~~~~~~ll~~~~~~~~~--~~~~~~~l~~ 79 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKN-GHLEIVKLLLEKGADVNAR--DKDGNTPLHL 79 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHc-CCHHHHHHHHHcCCCcccc--CCCCCCHHHH
Confidence 456788888888888888888888888888778888888888888887 7788888888888877776 7788888888
Q ss_pred HHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 010439 93 AAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (510)
Q Consensus 93 A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll 139 (510)
|+..++.+++++|+..+.+++..+..|.|||++|...++.+++++|+
T Consensus 80 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 80 AARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 88888888888888888888888888888888888888888888774
No 69
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.76 E-value=1.2e-18 Score=182.07 Aligned_cols=217 Identities=23% Similarity=0.212 Sum_probs=186.3
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A 93 (510)
..+-+|+|-.|+..|+.|+|++|+.+|+++..+|+.|.+||.+|+-. ||..+|+.|+++.+++++.. |..+.|+|-+|
T Consensus 754 e~n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaata-gh~tvV~~llk~ha~veaQs-drtkdt~lSla 831 (2131)
T KOG4369|consen 754 EPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATA-GHITVVQDLLKAHADVEAQS-DRTKDTMLSLA 831 (2131)
T ss_pred CccccccccccccCccHHHHHHHHHhcccccccccccchhhhhhccc-CchHHHHHHHhhhhhhhhhc-ccccCceEEEe
Confidence 45568999999999999999999999999999999999999999985 99999999999999999986 89999999999
Q ss_pred HHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHH
Q 010439 94 AKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVV 173 (510)
Q Consensus 94 ~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~ 173 (510)
|..|..++|++||.+|++-..++...+|||.+|..-|++++|.+|+.+|++++...-.+.|-.||+ +|.++|+...++.
T Consensus 832 csggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLm-latmngh~~at~~ 910 (2131)
T KOG4369|consen 832 CSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLM-LATMNGHQAATLS 910 (2131)
T ss_pred cCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhh-hhhhccccHHHHH
Confidence 999999999999999999999999999999999999999999999999999985455678999999 9999999999999
Q ss_pred HhhCCCCCCCC-CccccccccccccccChHHHHHHHHhhcCCCCCCCCCCceEEecCCCcceeeehhcCCC
Q 010439 174 VIPCGTANPSK-PLRFELVIYPSLQDVQPRAVIALWKAKIDEPKFHQPDPSLTIYDQATKIRYKFASANEG 243 (510)
Q Consensus 174 Ll~~ga~~~~~-~~~~~~~l~~a~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~~~~~ 243 (510)
|++.|.|+|.. ..+.++++-.+.-.+....+..|+.... + +...-+.|-|||..++....
T Consensus 911 ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~a--------n--vehRaktgltplme~AsgGy 971 (2131)
T KOG4369|consen 911 LLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQA--------N--VEHRAKTGLTPLMEMASGGY 971 (2131)
T ss_pred HhcccchhccccccccccceeeccccCcchHHHHHHHHhh--------h--hhhhcccCCcccchhhcCCc
Confidence 99999999853 3455667777766666666666554332 2 44445566777776664333
No 70
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.75 E-value=6.7e-18 Score=174.28 Aligned_cols=164 Identities=21% Similarity=0.226 Sum_probs=143.3
Q ss_pred hhhhcCCchHHHHHHHH---cCCHHHHHHHHHcCCC----Ccc-cCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccC
Q 010439 10 QHQQRQSKDELLYQWVI---AGDVDAIRALRSQGAS----LEW-MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYR 81 (510)
Q Consensus 10 ~~~~~~~g~t~L~~A~~---~g~~~~v~~Ll~~g~~----~~~-~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~ 81 (510)
.+.+...|+|+||.|.. .++.++++.||+.-.. +-. ....|+||||+|+.+ .+.++|++||+.|||++++-
T Consensus 136 ~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~-~~~~~V~lLl~~gADV~aRa 214 (782)
T KOG3676|consen 136 LNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVN-RDAELVRLLLAAGADVHARA 214 (782)
T ss_pred cccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHh-ccHHHHHHHHHcCCchhhHh
Confidence 34567889999999997 3667999999995322 111 235799999999998 99999999999999999852
Q ss_pred ------C-C--------------CCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 010439 82 ------P-G--------------GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (510)
Q Consensus 82 ------~-d--------------~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 140 (510)
+ | ..|..||-+||.-++.+++++|+++|+|++++|.+|+|.||..+..-..++-.++++
T Consensus 215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~ 294 (782)
T KOG3676|consen 215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALE 294 (782)
T ss_pred hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHh
Confidence 0 1 137899999999999999999999999999999999999999999988999999999
Q ss_pred cccc--ccccccccCCCCHHHHHhhhcCCHHHHHHHhhC
Q 010439 141 HICY--FCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (510)
Q Consensus 141 ~ga~--~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ 177 (510)
+|++ .. .+|..|.|||. +|++.|+.++.+.+++.
T Consensus 295 ~ga~~l~~--v~N~qgLTPLt-LAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 295 LGANALEH--VRNNQGLTPLT-LAAKLGKKEMFQHILER 330 (782)
T ss_pred cCCCcccc--ccccCCCChHH-HHHHhhhHHHHHHHHHh
Confidence 9999 66 89999999999 99999999999999987
No 71
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.74 E-value=1.4e-17 Score=132.78 Aligned_cols=89 Identities=35% Similarity=0.485 Sum_probs=77.6
Q ss_pred HHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHH
Q 010439 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHIN 133 (510)
Q Consensus 54 L~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~ 133 (510)
||+||.+ |+.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+
T Consensus 1 L~~A~~~-~~~~~~~~ll~~~~~~~~------~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 73 (89)
T PF12796_consen 1 LHIAAQN-GNLEILKFLLEKGADINL------GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLE 73 (89)
T ss_dssp HHHHHHT-TTHHHHHHHHHTTSTTTS------SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHH
T ss_pred CHHHHHc-CCHHHHHHHHHCcCCCCC------CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHH
Confidence 7899987 999999999998877763 788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccccccc
Q 010439 134 VVRAIESHICYFCGWLRE 151 (510)
Q Consensus 134 ~v~~Ll~~ga~~~~~~~d 151 (510)
++++|+++|++++ .+|
T Consensus 74 ~~~~Ll~~g~~~~--~~n 89 (89)
T PF12796_consen 74 IVKLLLEHGADVN--IRN 89 (89)
T ss_dssp HHHHHHHTTT-TT--SS-
T ss_pred HHHHHHHcCCCCC--CcC
Confidence 9999999999887 543
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.74 E-value=5.5e-17 Score=137.22 Aligned_cols=125 Identities=35% Similarity=0.475 Sum_probs=117.5
Q ss_pred ccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHH
Q 010439 45 WMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (510)
Q Consensus 45 ~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~ 124 (510)
.+|.+|.||||+|+.. ++.+++++|++.|.+.+.. +..|.||||+|+..+..+++++|++.|++++..+..|.||+|
T Consensus 2 ~~~~~g~t~l~~a~~~-~~~~~i~~li~~~~~~~~~--~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASN-GHLEVVKLLLENGADVNAK--DNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHc-CcHHHHHHHHHcCCCCCcc--CCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 4567899999999998 9999999999999998777 889999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHh
Q 010439 125 VARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (510)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll 175 (510)
+|+..++.+++++|++++.+++ ..+..|.||++ +|...++.+++++|+
T Consensus 79 ~a~~~~~~~~~~~L~~~~~~~~--~~~~~~~~~l~-~~~~~~~~~~~~~Ll 126 (126)
T cd00204 79 LAARNGNLDVVKLLLKHGADVN--ARDKDGRTPLH-LAAKNGHLEVVKLLL 126 (126)
T ss_pred HHHHcCcHHHHHHHHHcCCCCc--ccCCCCCCHHH-HHHhcCCHHHHHHhC
Confidence 9999999999999999998888 78999999999 999999999999875
No 73
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.72 E-value=7.1e-18 Score=176.46 Aligned_cols=219 Identities=20% Similarity=0.181 Sum_probs=154.6
Q ss_pred ccChhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCC
Q 010439 7 SMNQHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWM-DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGR 85 (510)
Q Consensus 7 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~ 85 (510)
+.|+..+|+.|.+||.+|+..||..+|+.||++-++++.. |+.+.|+|-+||. +|..++|++||.+|++-..+ +..
T Consensus 780 ganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacs-ggr~~vvelLl~~gankehr--nvs 856 (2131)
T KOG4369|consen 780 GANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACS-GGRTRVVELLLNAGANKEHR--NVS 856 (2131)
T ss_pred cccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecC-CCcchHHHHHHHhhcccccc--chh
Confidence 5778888888888888888888888888888887777763 5677777777776 47777777777777766665 556
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCC--CCCCcHHHHHHHcCCHHHHHHHHhcccccccc---------------
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRN--DDCHTALGVARIKGHINVVRAIESHICYFCGW--------------- 148 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d--~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~--------------- 148 (510)
.+|||-+|...|..++|+.||.+|+++|.+. +.|-.||++|..+||...++.|++.|.|+|..
T Consensus 857 DytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fq 936 (2131)
T KOG4369|consen 857 DYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQ 936 (2131)
T ss_pred hcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeecccc
Confidence 6666666666666666666666666665443 34556666666655555555555555444420
Q ss_pred -----------------ccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCCc--cccccccccccccChHHHHHHHH
Q 010439 149 -----------------LREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKPL--RFELVIYPSLQDVQPRAVIALWK 209 (510)
Q Consensus 149 -----------------~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~~--~~~~~l~~a~~~~~~~~i~~l~~ 209 (510)
.+-+.|.|||+ -++..|..++-++||..|+|.+..+. ...+++.+.+..++...+..++
T Consensus 937 gr~evv~lLLa~~anvehRaktgltplm-e~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~ll- 1014 (2131)
T KOG4369|consen 937 GRPEVVFLLLAAQANVEHRAKTGLTPLM-EMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLL- 1014 (2131)
T ss_pred CcchHHHHHHHHhhhhhhhcccCCcccc-hhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhh-
Confidence 56677888888 78888888888888888888876543 4467777777777766655422
Q ss_pred hhcCCCCCCCCCCceEEecCCCcceeeehh
Q 010439 210 AKIDEPKFHQPDPSLTIYDQATKIRYKFAS 239 (510)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~d~~~~t~l~~a~ 239 (510)
..|..+.+.++.|.|+|-+++
T Consensus 1015 ---------n~~atv~v~NkkG~T~Lwla~ 1035 (2131)
T KOG4369|consen 1015 ---------NGDATVRVPNKKGCTVLWLAS 1035 (2131)
T ss_pred ---------CCccceecccCCCCcccchhc
Confidence 224458888999999988776
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.66 E-value=3.9e-16 Score=161.39 Aligned_cols=125 Identities=26% Similarity=0.273 Sum_probs=117.3
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccC-----------------------CCCChHHHHHHHhCCcHHHHHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQGASLEWMD-----------------------KEGKTPLIVACMDSGLINVAKTL 70 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-----------------------~~g~TpL~~A~~~~~~~~~v~~L 70 (510)
...|.||||+|+.+.+.++|++||+.||||+.+- ..|..||-+||.. ++.||+++|
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~-nq~eivrlL 259 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACT-NQPEIVRLL 259 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHc-CCHHHHHHH
Confidence 3569999999999999999999999999997541 2478999999997 999999999
Q ss_pred HHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 010439 71 IELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN--ALVRNDDCHTALGVARIKGHINVVRAIESH 141 (510)
Q Consensus 71 l~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad--~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 141 (510)
+++|||++++ |..|+|.||..+..-..++.+++|++|++ ...+|+.|.|||.+|+..|..++.+.+++.
T Consensus 260 l~~gAd~~aq--DS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~ 330 (782)
T KOG3676|consen 260 LAHGADPNAQ--DSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER 330 (782)
T ss_pred HhcCCCCCcc--ccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence 9999999999 99999999999999999999999999999 899999999999999999999999999998
No 75
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.65 E-value=1.4e-15 Score=142.74 Aligned_cols=129 Identities=29% Similarity=0.362 Sum_probs=99.5
Q ss_pred cccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCC-----HHHHHHHHHCCC---CCccC
Q 010439 44 EWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL-----EPTVRLLLSCGA---NALVR 115 (510)
Q Consensus 44 ~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~-----~~~v~~Ll~~ga---d~~~~ 115 (510)
...+..+.+++|.++.. +..+++++|+..|++++.+ +..|.||||+|+..++ .+++++|++.|+ +.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~ 143 (235)
T COG0666 67 AARDLDGRLPLHSAASK-GDDKIVKLLLASGADVNAK--DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLR 143 (235)
T ss_pred ccCCccccCHHHHHHHc-CcHHHHHHHHHcCCCcccc--cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcccc
Confidence 34555677888888776 7777777888888888776 7778888888888877 788888888877 55555
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhCC
Q 010439 116 NDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPCG 178 (510)
Q Consensus 116 d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~g 178 (510)
|..|+||||+|+..|+.+++++|++.|++++ .++..|.|+++ .|...++.+++..++..+
T Consensus 144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~--~~~~~g~t~l~-~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 144 DEDGNTPLHWAALNGDADIVELLLEAGADPN--SRNSYGVTALD-PAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCCchhHHHHHcCchHHHHHHHhcCCCCc--ccccCCCcchh-hhcccchHHHHHHHHhcC
Confidence 7788888888888888888888888888777 67777888888 788888888888777765
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.63 E-value=1e-15 Score=115.77 Aligned_cols=103 Identities=29% Similarity=0.390 Sum_probs=74.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcC
Q 010439 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (510)
Q Consensus 18 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g 97 (510)
..-++|++++|.++.||..+..|.++|.. ..|+||||||+-. |+.+++++|+..|++++.+ |+.|-|||.-|+..|
T Consensus 3 d~~~~W~vkNG~~DeVk~~v~~g~nVn~~-~ggR~plhyAAD~-GQl~ilefli~iGA~i~~k--DKygITPLLsAvwEG 78 (117)
T KOG4214|consen 3 DMSVAWNVKNGEIDEVKQSVNEGLNVNEI-YGGRTPLHYAADY-GQLSILEFLISIGANIQDK--DKYGITPLLSAVWEG 78 (117)
T ss_pred chhHhhhhccCcHHHHHHHHHccccHHHH-hCCcccchHhhhc-chHHHHHHHHHhccccCCc--cccCCcHHHHHHHHh
Confidence 34567777777777777777777666654 3677777777776 7777777777777777766 777777777777777
Q ss_pred CHHHHHHHHHCCCCCccCCCCCCcHHH
Q 010439 98 LEPTVRLLLSCGANALVRNDDCHTALG 124 (510)
Q Consensus 98 ~~~~v~~Ll~~gad~~~~d~~g~TpL~ 124 (510)
|.++|++||..|+|-..+..+|.+.+.
T Consensus 79 H~~cVklLL~~GAdrt~~~PdG~~~~e 105 (117)
T KOG4214|consen 79 HRDCVKLLLQNGADRTIHAPDGTALIE 105 (117)
T ss_pred hHHHHHHHHHcCcccceeCCCchhHHh
Confidence 777777777777776666666655443
No 77
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.62 E-value=3.2e-15 Score=113.18 Aligned_cols=102 Identities=26% Similarity=0.292 Sum_probs=93.7
Q ss_pred hHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q 010439 52 TPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (510)
Q Consensus 52 TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 131 (510)
--.++++++ |.++-|+..+..|.++|.. ..|++|||||+-+|..+++++|+..|++++.+|+.|-|||.-|+..||
T Consensus 4 ~~~~W~vkN-G~~DeVk~~v~~g~nVn~~---~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH 79 (117)
T KOG4214|consen 4 MSVAWNVKN-GEIDEVKQSVNEGLNVNEI---YGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGH 79 (117)
T ss_pred hhHhhhhcc-CcHHHHHHHHHccccHHHH---hCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhh
Confidence 346788887 9999999999999999865 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccccccccCCCCHHH
Q 010439 132 INVVRAIESHICYFCGWLREFYGPSFLE 159 (510)
Q Consensus 132 ~~~v~~Ll~~ga~~~~~~~d~~g~t~L~ 159 (510)
.++|++||+.|++.. .+..+|.+.+.
T Consensus 80 ~~cVklLL~~GAdrt--~~~PdG~~~~e 105 (117)
T KOG4214|consen 80 RDCVKLLLQNGADRT--IHAPDGTALIE 105 (117)
T ss_pred HHHHHHHHHcCcccc--eeCCCchhHHh
Confidence 999999999999988 77888888777
No 78
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.60 E-value=1.8e-14 Score=135.14 Aligned_cols=129 Identities=35% Similarity=0.406 Sum_probs=110.5
Q ss_pred hhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCc-----HHHHHHHHHcCC---CccccCC
Q 010439 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGL-----INVAKTLIELGA---NINAYRP 82 (510)
Q Consensus 11 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~-----~~~v~~Ll~~ga---~~n~~~~ 82 (510)
...+..+.+++|.++..+..+++++|+..|++++.+|..|.||||+|+.. ++ .+++++|++.|+ +.+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~-~~~~~~~~~~~~~ll~~g~~~~~~~~~-- 143 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALN-GNPPEGNIEVAKLLLEAGADLDVNNLR-- 143 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhc-CCcccchHHHHHHHHHcCCCCCCcccc--
Confidence 34455678889999999999998889999988888888999999999887 77 899999999988 45544
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcc
Q 010439 83 GGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (510)
Q Consensus 83 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 142 (510)
|..|+||||+|+..|+.+++++|++.|++++.++..|.|++++|+..++.++++.|+..+
T Consensus 144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~ 203 (235)
T COG0666 144 DEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203 (235)
T ss_pred CCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence 888899999999999889999999999988888888999999999999999988888876
No 79
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.58 E-value=1.4e-14 Score=132.22 Aligned_cols=125 Identities=31% Similarity=0.364 Sum_probs=115.6
Q ss_pred CCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHH
Q 010439 15 QSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (510)
Q Consensus 15 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~ 94 (510)
..-..+|.-++..|+.+....||+---.+|.+|..|+|+|+.|+.+ |+.+++++||+.|+|+|... +..++||||+|+
T Consensus 10 d~~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAayk-Gnl~~v~lll~~gaDvN~~q-hg~~YTpLmFAA 87 (396)
T KOG1710|consen 10 DAPKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYK-GNLTLVELLLELGADVNDKQ-HGTLYTPLMFAA 87 (396)
T ss_pred cchhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhc-CcHHHHHHHHHhCCCcCccc-ccccccHHHHHH
Confidence 3457899999999999999999997667899999999999999998 99999999999999999863 778999999999
Q ss_pred HcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 010439 95 KRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (510)
Q Consensus 95 ~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 141 (510)
..|+.++.++||+.|+.....|.-|+|+-.+|+.-|+.++|..+-.+
T Consensus 88 LSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 88 LSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred HcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 99999999999999999999999999999999999999999877544
No 80
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.54 E-value=3e-14 Score=154.05 Aligned_cols=106 Identities=32% Similarity=0.432 Sum_probs=99.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCC
Q 010439 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL 98 (510)
Q Consensus 19 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~ 98 (510)
..||.|+..|+.+.|++|+++|+++|.+|..|.||||+|+.+ |+.+++++|+++|++++.+ |..|+||||+|+..|+
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~-g~~eiv~~LL~~Gadvn~~--d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACAN-GHVQVVRVLLEFGADPTLL--DKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHC-CCHHHHHHHHHCCCCCCCC--CCCCCCHHHHHHHCCc
Confidence 468999999999999999999999999999999999999997 9999999999999999998 8999999999999999
Q ss_pred HHHHHHHHHC-------CCCCccCCCCCCcHHHHHH
Q 010439 99 EPTVRLLLSC-------GANALVRNDDCHTALGVAR 127 (510)
Q Consensus 99 ~~~v~~Ll~~-------gad~~~~d~~g~TpL~~A~ 127 (510)
.+++++|+++ |++++..+..|.+|+..+.
T Consensus 161 ~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 161 REVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 9999999998 8888888888888877655
No 81
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.53 E-value=3.4e-14 Score=153.58 Aligned_cols=103 Identities=29% Similarity=0.298 Sum_probs=95.9
Q ss_pred hHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q 010439 52 TPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGH 131 (510)
Q Consensus 52 TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~ 131 (510)
+.||.|+.. |+.+++++|+++|+++|.+ |..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus 84 ~~L~~aa~~-G~~~~vk~LL~~Gadin~~--d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAAS-GDAVGARILLTGGADPNCR--DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHc-CCHHHHHHHHHCCCCCCCc--CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCc
Confidence 358899987 9999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-------cccccccccccCCCCHHH
Q 010439 132 INVVRAIESH-------ICYFCGWLREFYGPSFLE 159 (510)
Q Consensus 132 ~~~v~~Ll~~-------ga~~~~~~~d~~g~t~L~ 159 (510)
.+++++|+++ |++.+ ..+..|.+++.
T Consensus 161 ~~iv~~Ll~~~~~~~~~ga~~~--~~~~~g~~~~~ 193 (664)
T PTZ00322 161 REVVQLLSRHSQCHFELGANAK--PDSFTGKPPSL 193 (664)
T ss_pred HHHHHHHHhCCCcccccCCCCC--ccccCCCCccc
Confidence 9999999999 78777 67777777766
No 82
>KOG4172 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.47 E-value=2.4e-15 Score=100.27 Aligned_cols=54 Identities=41% Similarity=0.965 Sum_probs=49.9
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhc-cCCccccccccccceeEeeeC
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKINQVIRLYTV 510 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~~~~~i~~~ 510 (510)
.+|.||+|.+.+.|+.-|||++.|++|..++++ ..+.||+||++|..+|+.|..
T Consensus 8 dECTICye~pvdsVlYtCGHMCmCy~Cg~rl~~~~~g~CPiCRapi~dvIkTY~s 62 (62)
T KOG4172|consen 8 DECTICYEHPVDSVLYTCGHMCMCYACGLRLKKALHGCCPICRAPIKDVIKTYRS 62 (62)
T ss_pred cceeeeccCcchHHHHHcchHHhHHHHHHHHHHccCCcCcchhhHHHHHHHhhcC
Confidence 589999999999999999999999999999988 456899999999999998863
No 83
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=1.5e-13 Score=134.84 Aligned_cols=91 Identities=33% Similarity=0.434 Sum_probs=45.8
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCH
Q 010439 20 LLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLE 99 (510)
Q Consensus 20 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~ 99 (510)
.|.-|+..|.+++|+..+..=-|+..-|..|.|+||-|+.. ||++||++||+.|+|+|+. |.+||||||.|+..+++
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCa-ghyeIVkFLi~~ganVNa~--DSdGWTPLHCAASCNnv 629 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICA-GHYEIVKFLIEFGANVNAA--DSDGWTPLHCAASCNNV 629 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhc-chhHHHHHHHhcCCcccCc--cCCCCchhhhhhhcCch
Confidence 34444455555555555544444444445555555555543 5555555555555555554 45555555555555555
Q ss_pred HHHHHHHHCCCCCc
Q 010439 100 PTVRLLLSCGANAL 113 (510)
Q Consensus 100 ~~v~~Ll~~gad~~ 113 (510)
.+++.|+++|+-+.
T Consensus 630 ~~ckqLVe~Gaavf 643 (752)
T KOG0515|consen 630 PMCKQLVESGAAVF 643 (752)
T ss_pred HHHHHHHhccceEE
Confidence 55555555554443
No 84
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.47 E-value=5.1e-14 Score=101.04 Aligned_cols=55 Identities=42% Similarity=0.501 Sum_probs=18.2
Q ss_pred HHHcC-CCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHH
Q 010439 36 LRSQG-ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHA 93 (510)
Q Consensus 36 Ll~~g-~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A 93 (510)
||++| +++|.+|..|+||||+||.+ |+.+++++|++.|+|++.+ |..|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~-g~~~~v~~Ll~~g~d~~~~--d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARY-GHSEVVRLLLQNGADPNAK--DKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHH-T-HHHHHHHHHCT--TT-----TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHc-CcHHHHHHHHHCcCCCCCC--cCCCCCHHHhC
Confidence 34444 45555555555555555554 5555555555555555555 55555555554
No 85
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.47 E-value=5.4e-14 Score=100.92 Aligned_cols=55 Identities=45% Similarity=0.631 Sum_probs=29.1
Q ss_pred HHHcC-CCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHH
Q 010439 70 LIELG-ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVA 126 (510)
Q Consensus 70 Ll~~g-a~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A 126 (510)
||++| +++|.. |..|.||||+|+.+|+.+++++|++.|+|++.+|..|+||||+|
T Consensus 1 LL~~~~~~~n~~--d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQ--DKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT-----TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCc--CCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 56777 777877 78888888888888888888888888888888888888888876
No 86
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.43 E-value=9.1e-13 Score=120.42 Aligned_cols=120 Identities=23% Similarity=0.224 Sum_probs=109.6
Q ss_pred CChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccC-CCCCCcHHHHHHH
Q 010439 50 GKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR-NDDCHTALGVARI 128 (510)
Q Consensus 50 g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~-d~~g~TpL~~A~~ 128 (510)
-..||.-++-+ |..+-+..||..--++|.+ |..|+|+|+.|+..|+.++|++||+.|+|+|.. +..++||||+|+.
T Consensus 12 ~~~~Lle~i~K-ndt~~a~~LLs~vr~vn~~--D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAAL 88 (396)
T KOG1710|consen 12 PKSPLLEAIDK-NDTEAALALLSTVRQVNQR--DPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAAL 88 (396)
T ss_pred hhhHHHHHHcc-CcHHHHHHHHHHhhhhhcc--CCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHH
Confidence 46889999987 8899999999876668988 899999999999999999999999999999864 5678999999999
Q ss_pred cCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHh
Q 010439 129 KGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVI 175 (510)
Q Consensus 129 ~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll 175 (510)
.|+.++.++|++.|+... ..|.-|+|+-. +|+.-|+.++|.++-
T Consensus 89 SGn~dvcrllldaGa~~~--~vNsvgrTAaq-mAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 89 SGNQDVCRLLLDAGARMY--LVNSVGRTAAQ-MAAFVGHHECVAIIN 132 (396)
T ss_pred cCCchHHHHHHhccCccc--cccchhhhHHH-HHHHhcchHHHHHHh
Confidence 999999999999999998 88999999999 999999999998664
No 87
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.42 E-value=2.9e-13 Score=96.54 Aligned_cols=54 Identities=28% Similarity=0.449 Sum_probs=25.7
Q ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHH
Q 010439 17 KDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLI 71 (510)
Q Consensus 17 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll 71 (510)
|.|+||+|++.|+.+++++|+++|+++|.+|.+|+||||+|+.. |+.+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~-g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKN-GNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHT-T-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc-cCHHHHHHHC
Confidence 34555555555555555555555555555555555555555554 5555555553
No 88
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.42 E-value=3.7e-13 Score=95.96 Aligned_cols=53 Identities=40% Similarity=0.596 Sum_probs=23.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHH
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAI 138 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~L 138 (510)
|+||||+|++.|+.+++++|+++|+|++.+|.+|+||||+|+..|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 34445555555555555555544444444444455555555555555544444
No 89
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=1.4e-12 Score=128.10 Aligned_cols=118 Identities=17% Similarity=0.114 Sum_probs=102.5
Q ss_pred HHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHH
Q 010439 54 LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHIN 133 (510)
Q Consensus 54 L~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~ 133 (510)
|.-|+.. |.+|+|+..+..--|+..- +..|.|+||-|+..||.+||++|++.|+++|..|.+||||||+|+..+++.
T Consensus 554 LLDaaLe-GEldlVq~~i~ev~DpSqp--NdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~ 630 (752)
T KOG0515|consen 554 LLDAALE-GELDLVQRIIYEVTDPSQP--NDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVP 630 (752)
T ss_pred HHhhhhc-chHHHHHHHHHhhcCCCCC--CccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchH
Confidence 3446666 9999999999887788776 889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccccccccCCCCHHHHHh--hhcCCHHHHHHHhh
Q 010439 134 VVRAIESHICYFCGWLREFYGPSFLEALA--PQLMSRKIWVVVIP 176 (510)
Q Consensus 134 ~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A--~~~~~~~~~~~Ll~ 176 (510)
+++.|++.|+-+.. .+-.++.|+.. -+ ...|+..|.+||-.
T Consensus 631 ~ckqLVe~GaavfA-sTlSDmeTa~e-KCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 631 MCKQLVESGAAVFA-STLSDMETAAE-KCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred HHHHHHhccceEEe-eecccccchhh-hcchhhhhHHHHHHHHHH
Confidence 99999999988873 34456788887 44 34688899999863
No 90
>PF13920 zf-C3HC4_3: Zinc finger, C3HC4 type (RING finger); PDB: 2YHN_B 2YHO_G 3T6P_A 2CSY_A 2VJE_B 2VJF_B 2HDP_B 2EA5_A 2ECG_A 3EB5_A ....
Probab=99.31 E-value=1.2e-12 Score=91.43 Aligned_cols=49 Identities=37% Similarity=0.956 Sum_probs=42.6
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccce
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
+..|.||++.+.+++++||||.++|..|+.++....++||+||++|.++
T Consensus 2 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CP~Cr~~i~~V 50 (50)
T PF13920_consen 2 DEECPICFENPRDVVLLPCGHLCFCEECAERLLKRKKKCPICRQPIESV 50 (50)
T ss_dssp HSB-TTTSSSBSSEEEETTCEEEEEHHHHHHHHHTTSBBTTTTBB-SEE
T ss_pred cCCCccCCccCCceEEeCCCChHHHHHHhHHhcccCCCCCcCChhhcCC
Confidence 3689999999999999999999559999999988778999999999764
No 91
>KOG4275 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=3.9e-12 Score=116.03 Aligned_cols=51 Identities=37% Similarity=0.959 Sum_probs=48.9
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccceeEeeeC
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 510 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i~~~ 510 (510)
...|.||||.+++.+|++|||++.|..|.++|.. ||+||+.|.++++||.|
T Consensus 300 ~~LC~ICmDaP~DCvfLeCGHmVtCt~CGkrm~e----CPICRqyi~rvvrif~~ 350 (350)
T KOG4275|consen 300 RRLCAICMDAPRDCVFLECGHMVTCTKCGKRMNE----CPICRQYIVRVVRIFRV 350 (350)
T ss_pred HHHHHHHhcCCcceEEeecCcEEeehhhcccccc----CchHHHHHHHHHhhhcC
Confidence 6799999999999999999999999999999986 99999999999999986
No 92
>KOG4265 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=2e-11 Score=116.04 Aligned_cols=56 Identities=29% Similarity=0.866 Sum_probs=51.6
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccceeEeee
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYT 509 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i~~ 509 (510)
++..+|+||+...++.+++||+|.+.|..|++.+.-+..+||+||++|.+.+.||.
T Consensus 288 ~~gkeCVIClse~rdt~vLPCRHLCLCs~Ca~~Lr~q~n~CPICRqpi~~ll~i~~ 343 (349)
T KOG4265|consen 288 ESGKECVICLSESRDTVVLPCRHLCLCSGCAKSLRYQTNNCPICRQPIEELLEIYV 343 (349)
T ss_pred cCCCeeEEEecCCcceEEecchhhehhHhHHHHHHHhhcCCCccccchHhhheecc
Confidence 44579999999999999999999999999999999777889999999999999874
No 93
>PLN03208 E3 ubiquitin-protein ligase RMA2; Provisional
Probab=98.93 E-value=1.1e-09 Score=96.56 Aligned_cols=54 Identities=26% Similarity=0.807 Sum_probs=45.2
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHHhcc----------------CCccccccccccc--eeEee
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK----------------KGDCPVCRTKINQ--VIRLY 508 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~----------------~~~Cp~Cr~~i~~--~~~i~ 508 (510)
++...|.||++...+++..+|||.| |+.|+..|... ..+||+||.+|.. .+.||
T Consensus 16 ~~~~~CpICld~~~dPVvT~CGH~F-C~~CI~~wl~~s~~s~~~~~~~~~~k~~~~CPvCR~~Is~~~LvPiy 87 (193)
T PLN03208 16 GGDFDCNICLDQVRDPVVTLCGHLF-CWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDVSEATLVPIY 87 (193)
T ss_pred CCccCCccCCCcCCCcEEcCCCchh-HHHHHHHHHHhccccccccccccccCCCCcCCCCCCcCChhcEEEee
Confidence 3457899999999999999999999 99999988531 2479999999964 66666
No 94
>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]
Probab=98.92 E-value=6.6e-10 Score=102.41 Aligned_cols=48 Identities=35% Similarity=0.938 Sum_probs=44.1
Q ss_pred cccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 455 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
....|++|+|...++...||||.| |+.|+..|...+..||+||.++..
T Consensus 238 a~~kC~LCLe~~~~pSaTpCGHiF-CWsCI~~w~~ek~eCPlCR~~~~p 285 (293)
T KOG0317|consen 238 ATRKCSLCLENRSNPSATPCGHIF-CWSCILEWCSEKAECPLCREKFQP 285 (293)
T ss_pred CCCceEEEecCCCCCCcCcCcchH-HHHHHHHHHccccCCCcccccCCC
Confidence 336899999999999999999999 999999999888899999999863
No 95
>KOG0823 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=1.2e-09 Score=97.80 Aligned_cols=56 Identities=32% Similarity=0.831 Sum_probs=48.7
Q ss_pred CCcccccccccccccceEEeCCCCccchHHhHHHHhccC---Ccccccccccc--ceeEeee
Q 010439 453 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKIN--QVIRLYT 509 (510)
Q Consensus 453 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i~--~~~~i~~ 509 (510)
++....|.||+|..+++|+..|||.| ||.|+-+|.... +.||+|+..|. ++|.||-
T Consensus 44 ~~~~FdCNICLd~akdPVvTlCGHLF-CWpClyqWl~~~~~~~~cPVCK~~Vs~~~vvPlYG 104 (230)
T KOG0823|consen 44 DGGFFDCNICLDLAKDPVVTLCGHLF-CWPCLYQWLQTRPNSKECPVCKAEVSIDTVVPLYG 104 (230)
T ss_pred CCCceeeeeeccccCCCEEeecccce-ehHHHHHHHhhcCCCeeCCccccccccceEEeeec
Confidence 45567999999999999999999999 999999998753 36999999885 6888884
No 96
>KOG0320 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=2.9e-09 Score=90.99 Aligned_cols=53 Identities=34% Similarity=0.855 Sum_probs=44.6
Q ss_pred cccccccccccccce--EEeCCCCccchHHhHHHHhccCCcccccccccc--ceeEee
Q 010439 455 SSSSCVICWEAPVEG--ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN--QVIRLY 508 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~--~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~--~~~~i~ 508 (510)
....|+|||+..... +...|||+| |..|++...+...+||+||+.|+ ++++||
T Consensus 130 ~~~~CPiCl~~~sek~~vsTkCGHvF-C~~Cik~alk~~~~CP~C~kkIt~k~~~rI~ 186 (187)
T KOG0320|consen 130 GTYKCPICLDSVSEKVPVSTKCGHVF-CSQCIKDALKNTNKCPTCRKKITHKQFHRIY 186 (187)
T ss_pred cccCCCceecchhhccccccccchhH-HHHHHHHHHHhCCCCCCcccccchhhheecc
Confidence 337899999986444 457999999 99999999988889999998886 588887
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.89 E-value=9.7e-10 Score=113.67 Aligned_cols=99 Identities=19% Similarity=0.251 Sum_probs=83.6
Q ss_pred CCHHHHHHHHH-cCCC-CcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHH
Q 010439 28 GDVDAIRALRS-QGAS-LEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLL 105 (510)
Q Consensus 28 g~~~~v~~Ll~-~g~~-~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~L 105 (510)
+..+-++-+++ .+.+ .|++|..|+|+||+|+.. +..+++++||++|+|++.+| ...|+||||.|+.+|+++++-+|
T Consensus 28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~-~k~~~l~wLlqhGidv~vqD-~ESG~taLHRaiyyG~idca~lL 105 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSE-NKNSFLRWLLQHGIDVFVQD-EESGYTALHRAIYYGNIDCASLL 105 (1267)
T ss_pred CChhHHHHHHHHhhhhhhhHHHhhccceeeeeecc-chhHHHHHHHhcCceeeecc-ccccchHhhHhhhhchHHHHHHH
Confidence 33334554444 3322 577899999999999987 88999999999999999995 56799999999999999999999
Q ss_pred HHCCCCCccCCCCCCcHHHHHHH
Q 010439 106 LSCGANALVRNDDCHTALGVARI 128 (510)
Q Consensus 106 l~~gad~~~~d~~g~TpL~~A~~ 128 (510)
|++|+.+.++|++|..||.+-++
T Consensus 106 L~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 106 LSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred HhcCCceEEecccCCCHHHHHhh
Confidence 99999999999999999998776
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.87 E-value=8.1e-09 Score=101.29 Aligned_cols=100 Identities=27% Similarity=0.344 Sum_probs=85.1
Q ss_pred cccCCCCChH------HHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCC
Q 010439 44 EWMDKEGKTP------LIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRND 117 (510)
Q Consensus 44 ~~~d~~g~Tp------L~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 117 (510)
-.+|.+|.|. ||-.++. |+.+..-.||..||++|+.. -..|.||||.|++.|...-+++|+-+|+|++..|.
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt-~nlet~LRll~lGA~~N~~h-pekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~ 198 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRT-GNLETCLRLLSLGAQANFFH-PEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDS 198 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhc-ccHHHHHHHHHcccccCCCC-cccCCchhHHHHhccchhhhhHHhhccCCCCCCCC
Confidence 3456666554 6777765 99999888999999999986 35799999999999999999999999999999999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhccccc
Q 010439 118 DCHTALGVARIKGHINVVRAIESHICYF 145 (510)
Q Consensus 118 ~g~TpL~~A~~~g~~~~v~~Ll~~ga~~ 145 (510)
+|.||+.+|-..||-++.+.|++...++
T Consensus 199 ~GmtP~~~AR~~gH~~laeRl~e~~y~v 226 (669)
T KOG0818|consen 199 SGMTPVDYARQGGHHELAERLVEIQYEL 226 (669)
T ss_pred CCCcHHHHHHhcCchHHHHHHHHHHHHH
Confidence 9999999999999999988888764443
No 99
>PF13923 zf-C3HC4_2: Zinc finger, C3HC4 type (RING finger); PDB: 3HCU_A 2ECI_A 2JMD_A 3HCS_B 3HCT_A 3ZTG_A 2YUR_A 3L11_A.
Probab=98.82 E-value=2.1e-09 Score=70.50 Aligned_cols=38 Identities=37% Similarity=0.983 Sum_probs=33.4
Q ss_pred cccccccccce-EEeCCCCccchHHhHHHHhccCCccccc
Q 010439 459 CVICWEAPVEG-ACVPCGHMAGCMSCLSEIKAKKGDCPVC 497 (510)
Q Consensus 459 C~iC~~~~~~~-~~~pCgH~~~C~~C~~~~~~~~~~Cp~C 497 (510)
|+||++...++ ++++|||.| |+.|+.++.+.+.+||+|
T Consensus 1 C~iC~~~~~~~~~~~~CGH~f-C~~C~~~~~~~~~~CP~C 39 (39)
T PF13923_consen 1 CPICLDELRDPVVVTPCGHSF-CKECIEKYLEKNPKCPVC 39 (39)
T ss_dssp ETTTTSB-SSEEEECTTSEEE-EHHHHHHHHHCTSB-TTT
T ss_pred CCCCCCcccCcCEECCCCCch-hHHHHHHHHHCcCCCcCC
Confidence 89999999999 689999999 999999998887799998
No 100
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.81 E-value=4.5e-09 Score=102.63 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=74.7
Q ss_pred CCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHH
Q 010439 47 DKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC-GANALVRNDDCHTALGV 125 (510)
Q Consensus 47 d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~TpL~~ 125 (510)
+.++.-.++||+.. |.+..++.+.-.|.|++.. |.+.+|+||.|+..|+++++++||+. +.+++.+|..|+|||.-
T Consensus 503 ~~~~~i~~~~aa~~-GD~~alrRf~l~g~D~~~~--DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDd 579 (622)
T KOG0506|consen 503 ENDTVINVMYAAKN-GDLSALRRFALQGMDLETK--DYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDD 579 (622)
T ss_pred cccchhhhhhhhhc-CCHHHHHHHHHhccccccc--ccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchH
Confidence 34567778888876 7788888877788888877 77788888888888888888888864 77888888888888888
Q ss_pred HHHcCCHHHHHHHHhccc
Q 010439 126 ARIKGHINVVRAIESHIC 143 (510)
Q Consensus 126 A~~~g~~~~v~~Ll~~ga 143 (510)
|...+|.+++++|.+..-
T Consensus 580 A~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 580 AKHFKHKEVVKLLEEAQY 597 (622)
T ss_pred hHhcCcHHHHHHHHHHhc
Confidence 888888888888876653
No 101
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.79 E-value=2e-08 Score=98.63 Aligned_cols=87 Identities=30% Similarity=0.358 Sum_probs=81.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccC-CCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcC
Q 010439 19 ELLYQWVIAGDVDAIRALRSQGASLEWMD-KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (510)
Q Consensus 19 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d-~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g 97 (510)
--||..++.|++++--.||..|+++|..+ ..|.||||.|++. |+.--+++|+-+|||+++. |..|+||+.||-..|
T Consensus 135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~-Gq~~Q~ElL~vYGAD~~a~--d~~GmtP~~~AR~~g 211 (669)
T KOG0818|consen 135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKA-GQILQAELLAVYGADPGAQ--DSSGMTPVDYARQGG 211 (669)
T ss_pred HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhc-cchhhhhHHhhccCCCCCC--CCCCCcHHHHHHhcC
Confidence 35999999999999999999999999987 4799999999998 9999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHC
Q 010439 98 LEPTVRLLLSC 108 (510)
Q Consensus 98 ~~~~v~~Ll~~ 108 (510)
|-++.+.|++.
T Consensus 212 H~~laeRl~e~ 222 (669)
T KOG0818|consen 212 HHELAERLVEI 222 (669)
T ss_pred chHHHHHHHHH
Confidence 99998888874
No 102
>PF13639 zf-RING_2: Ring finger domain; PDB: 2KIZ_A 4EPO_C 1IYM_A 2EP4_A 2ECT_A 2JRJ_A 2ECN_A 2ECM_A 3NG2_A 2EA6_A ....
Probab=98.78 E-value=2.9e-09 Score=72.02 Aligned_cols=40 Identities=40% Similarity=0.888 Sum_probs=35.4
Q ss_pred ccccccccc---cceEEeCCCCccchHHhHHHHhccCCcccccc
Q 010439 458 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 498 (510)
Q Consensus 458 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr 498 (510)
.|+||++.. ..++.++|||.| |..|+..|.+.+.+||+||
T Consensus 2 ~C~IC~~~~~~~~~~~~l~C~H~f-h~~Ci~~~~~~~~~CP~CR 44 (44)
T PF13639_consen 2 ECPICLEEFEDGEKVVKLPCGHVF-HRSCIKEWLKRNNSCPVCR 44 (44)
T ss_dssp CETTTTCBHHTTSCEEEETTSEEE-EHHHHHHHHHHSSB-TTTH
T ss_pred CCcCCChhhcCCCeEEEccCCCee-CHHHHHHHHHhCCcCCccC
Confidence 699999985 577788999999 9999999999888999997
No 103
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.78 E-value=4.2e-09 Score=109.11 Aligned_cols=83 Identities=22% Similarity=0.213 Sum_probs=78.6
Q ss_pred hhhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC-CCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCCh
Q 010439 10 QHQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDK-EGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGT 88 (510)
Q Consensus 10 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~T 88 (510)
.|.+|..|+|+||+|+..|..+++++||++|+|++.+|. .|+||||-|+.. |++|++-+||.+|+.+.++ |+.|.+
T Consensus 45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyy-G~idca~lLL~~g~SL~i~--Dkegls 121 (1267)
T KOG0783|consen 45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYY-GNIDCASLLLSKGRSLRIK--DKEGLS 121 (1267)
T ss_pred hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhh-chHHHHHHHHhcCCceEEe--cccCCC
Confidence 467889999999999999999999999999999999996 799999999999 9999999999999999999 999999
Q ss_pred HHHHHHH
Q 010439 89 PLHHAAK 95 (510)
Q Consensus 89 pLh~A~~ 95 (510)
||..-++
T Consensus 122 plq~~~r 128 (1267)
T KOG0783|consen 122 PLQFLSR 128 (1267)
T ss_pred HHHHHhh
Confidence 9998876
No 104
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.77 E-value=7e-09 Score=101.32 Aligned_cols=93 Identities=20% Similarity=0.180 Sum_probs=68.5
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc-cccccccccccCCCCHHHHHh
Q 010439 84 GRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH-ICYFCGWLREFYGPSFLEALA 162 (510)
Q Consensus 84 ~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~d~~g~t~L~~~A 162 (510)
.++.-.++||++.|.+..++.+.-.|.|++.+|.+.+|+||.|+..|+++++++|++. +.+++ .+|..|+|||. -|
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~--~kDRw~rtPlD-dA 580 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPD--PKDRWGRTPLD-DA 580 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCC--hhhccCCCcch-Hh
Confidence 4556677777777777777777777777777777777777777777777777777765 24455 67777777777 77
Q ss_pred hhcCCHHHHHHHhhCCC
Q 010439 163 PQLMSRKIWVVVIPCGT 179 (510)
Q Consensus 163 ~~~~~~~~~~~Ll~~ga 179 (510)
...++.+++++|-+...
T Consensus 581 ~~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 581 KHFKHKEVVKLLEEAQY 597 (622)
T ss_pred HhcCcHHHHHHHHHHhc
Confidence 77777777777766544
No 105
>PHA02929 N1R/p28-like protein; Provisional
Probab=98.76 E-value=6.1e-09 Score=96.12 Aligned_cols=51 Identities=37% Similarity=0.840 Sum_probs=43.2
Q ss_pred ccccccccccccc--------eEEeCCCCccchHHhHHHHhccCCccccccccccceeEe
Q 010439 456 SSSCVICWEAPVE--------GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 456 ~~~C~iC~~~~~~--------~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i 507 (510)
..+|+||++...+ +++.+|+|.| |..|+..|...+..||+||.++..+++.
T Consensus 174 ~~eC~ICle~~~~~~~~~~~~~vl~~C~H~F-C~~CI~~Wl~~~~tCPlCR~~~~~v~~~ 232 (238)
T PHA02929 174 DKECAICMEKVYDKEIKNMYFGILSNCNHVF-CIECIDIWKKEKNTCPVCRTPFISVIKS 232 (238)
T ss_pred CCCCccCCcccccCccccccceecCCCCCcc-cHHHHHHHHhcCCCCCCCCCEeeEEeee
Confidence 3689999997543 3566899999 9999999998888999999999887655
No 106
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.75 E-value=3.9e-08 Score=97.90 Aligned_cols=118 Identities=21% Similarity=0.266 Sum_probs=91.0
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCC--ccccCCCCCCChHHHHHHHcCC
Q 010439 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGAN--INAYRPGGRGGTPLHHAAKRGL 98 (510)
Q Consensus 21 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~--~n~~~~d~~g~TpLh~A~~~g~ 98 (510)
|..|+..+++--+..+-..|.++-.++.+..|.||||+.. |+-++|++||++|.. ++.. |..|.|+||-|+..++
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~t-g~~eivkyildh~p~elld~~--de~get~lhkaa~~~~ 946 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKT-GNGEIVKYILDHGPSELLDMA--DETGETALHKAACQRN 946 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhc-CChHHHHHHHhcCCHHHHHHH--hhhhhHHHHHHHHhcc
Confidence 5556666766666666667777777777888888888876 888888888888753 3444 6778888888888888
Q ss_pred HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q 010439 99 EPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESH 141 (510)
Q Consensus 99 ~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ 141 (510)
..+..+|++.|+.+...|..|.||-.-|-+.|..++..+|..+
T Consensus 947 r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 947 RAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLESR 989 (1004)
T ss_pred hHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence 8888888888888888888888888888888888888887655
No 107
>KOG1571 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.74 E-value=2.8e-09 Score=101.63 Aligned_cols=54 Identities=35% Similarity=0.857 Sum_probs=48.4
Q ss_pred CCcccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccceeEeeeC
Q 010439 453 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLYTV 510 (510)
Q Consensus 453 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i~~~ 510 (510)
......|+||++.+.+.+++||||+++|..|...+.+ ||+||+.|...+++|+.
T Consensus 302 ~~~p~lcVVcl~e~~~~~fvpcGh~ccct~cs~~l~~----CPvCR~rI~~~~k~y~~ 355 (355)
T KOG1571|consen 302 LPQPDLCVVCLDEPKSAVFVPCGHVCCCTLCSKHLPQ----CPVCRQRIRLVRKRYRS 355 (355)
T ss_pred cCCCCceEEecCCccceeeecCCcEEEchHHHhhCCC----CchhHHHHHHHHHHhcC
Confidence 3344689999999999999999999999999998876 99999999999999863
No 108
>PF15227 zf-C3HC4_4: zinc finger of C3HC4-type, RING; PDB: 2EGP_A 2ECV_A 2ECJ_A 2YSL_A 2YSJ_A.
Probab=98.74 E-value=7e-09 Score=68.83 Aligned_cols=38 Identities=37% Similarity=0.905 Sum_probs=30.8
Q ss_pred cccccccccceEEeCCCCccchHHhHHHHhccC----Cccccc
Q 010439 459 CVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK----GDCPVC 497 (510)
Q Consensus 459 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~----~~Cp~C 497 (510)
|+||++.+.++|.++|||.| |..|+.++++.. ..||.|
T Consensus 1 CpiC~~~~~~Pv~l~CGH~F-C~~Cl~~~~~~~~~~~~~CP~C 42 (42)
T PF15227_consen 1 CPICLDLFKDPVSLPCGHSF-CRSCLERLWKEPSGSGFSCPEC 42 (42)
T ss_dssp ETTTTSB-SSEEE-SSSSEE-EHHHHHHHHCCSSSST---SSS
T ss_pred CCccchhhCCccccCCcCHH-HHHHHHHHHHccCCcCCCCcCC
Confidence 89999999999999999999 999999999764 259987
No 109
>PF13606 Ank_3: Ankyrin repeat
Probab=98.71 E-value=1.7e-08 Score=61.76 Aligned_cols=28 Identities=46% Similarity=0.767 Sum_probs=12.2
Q ss_pred CChHHHHHHHhCCcHHHHHHHHHcCCCcc
Q 010439 50 GKTPLIVACMDSGLINVAKTLIELGANIN 78 (510)
Q Consensus 50 g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n 78 (510)
|+||||+||.. |+.+++++||++|+|+|
T Consensus 2 G~T~Lh~A~~~-g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASN-GNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHh-CCHHHHHHHHHcCCCCC
Confidence 44444444443 44444444444444443
No 110
>PF13606 Ank_3: Ankyrin repeat
Probab=98.70 E-value=1.9e-08 Score=61.52 Aligned_cols=28 Identities=46% Similarity=0.614 Sum_probs=17.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCc
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANAL 113 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 113 (510)
|+||||+|++.|+.++|++||++|+|+|
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5666666666666666666666666654
No 111
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.68 E-value=3.1e-08 Score=62.40 Aligned_cols=30 Identities=43% Similarity=0.610 Sum_probs=13.1
Q ss_pred CChHHHHHHHhCCcHHHHHHHHHcCCCcccc
Q 010439 50 GKTPLIVACMDSGLINVAKTLIELGANINAY 80 (510)
Q Consensus 50 g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~ 80 (510)
|+||||+|+.. |+.+++++||++|++++.+
T Consensus 2 G~TpLh~A~~~-~~~~~v~~Ll~~ga~~~~~ 31 (33)
T PF00023_consen 2 GNTPLHYAAQR-GHPDIVKLLLKHGADINAR 31 (33)
T ss_dssp SBBHHHHHHHT-TCHHHHHHHHHTTSCTTCB
T ss_pred cccHHHHHHHH-HHHHHHHHHHHCcCCCCCC
Confidence 44444444443 4444444444444444433
No 112
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.67 E-value=5.6e-08 Score=97.21 Aligned_cols=84 Identities=27% Similarity=0.326 Sum_probs=55.0
Q ss_pred CcHHHHHHHHHcCCC--ccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHH
Q 010439 62 GLINVAKTLIELGAN--INAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIE 139 (510)
Q Consensus 62 ~~~~~v~~Ll~~ga~--~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll 139 (510)
..+..+-+||.+|-. +|..--+.+|+|+||+||+.|++.+.++|+-+|+|+..+|..|+|+|.||-..|.-+++..|+
T Consensus 635 ~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~ll 714 (749)
T KOG0705|consen 635 EDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLL 714 (749)
T ss_pred HHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHH
Confidence 455666666666643 222212455677777777777777777777777777777777777777777777777777777
Q ss_pred hccccc
Q 010439 140 SHICYF 145 (510)
Q Consensus 140 ~~ga~~ 145 (510)
.+|+.-
T Consensus 715 q~gcp~ 720 (749)
T KOG0705|consen 715 QYGCPD 720 (749)
T ss_pred HcCCCc
Confidence 777543
No 113
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.65 E-value=7.2e-08 Score=96.48 Aligned_cols=92 Identities=24% Similarity=0.177 Sum_probs=80.8
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCCC----ccCCCCCCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhh
Q 010439 88 TPLHHAAKRGLEPTVRLLLSCGANA----LVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAP 163 (510)
Q Consensus 88 TpLh~A~~~g~~~~v~~Ll~~gad~----~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~ 163 (510)
.-|..|+....+..+-+||.+|... ...+.+|+|+||+|+..|++.+.++|+=+|+|+. .+|..|+|+|. ||-
T Consensus 626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~--~rda~g~t~l~-yar 702 (749)
T KOG0705|consen 626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM--ARDAHGRTALF-YAR 702 (749)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccce--ecccCCchhhh-hHh
Confidence 4577788888889999999998543 3345678999999999999999999999999999 99999999999 999
Q ss_pred hcCCHHHHHHHhhCCCCCC
Q 010439 164 QLMSRKIWVVVIPCGTANP 182 (510)
Q Consensus 164 ~~~~~~~~~~Ll~~ga~~~ 182 (510)
+.+..+++.+|+++|...+
T Consensus 703 ~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 703 QAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred hcccHHHHHHHHHcCCCcc
Confidence 9999999999999998653
No 114
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.64 E-value=3.5e-08 Score=62.18 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=31.1
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCC
Q 010439 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDK 48 (510)
Q Consensus 16 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~ 48 (510)
+|.||||+|+..|+.++|++||++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 589999999999999999999999999998874
No 115
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.59 E-value=1.1e-07 Score=94.82 Aligned_cols=86 Identities=27% Similarity=0.373 Sum_probs=67.5
Q ss_pred HHHHHHHcCCHHHHHHHHHc--CCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcC
Q 010439 20 LLYQWVIAGDVDAIRALRSQ--GASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRG 97 (510)
Q Consensus 20 ~L~~A~~~g~~~~v~~Ll~~--g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g 97 (510)
+||+++...+.+-+..++.. ...++.+|..|.||||+|+.. |+.+.++.|+.+|+++-.+ +..||+|||-|+..|
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~L-g~~~~a~~Ll~a~Adv~~k--N~~gWs~L~EAv~~g 99 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRL-GHVEAARILLSAGADVSIK--NNEGWSPLHEAVSTG 99 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHh-cCHHHHHHHHhcCCCcccc--ccccccHHHHHHHcC
Confidence 48888887777666654442 346777888888888888887 8888888888888888887 888888888888888
Q ss_pred CHHHHHHHHHC
Q 010439 98 LEPTVRLLLSC 108 (510)
Q Consensus 98 ~~~~v~~Ll~~ 108 (510)
+.+++..+|.+
T Consensus 100 ~~q~i~~vlr~ 110 (560)
T KOG0522|consen 100 NEQIITEVLRH 110 (560)
T ss_pred CHHHHHHHHHH
Confidence 88887777765
No 116
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.59 E-value=2e-07 Score=93.00 Aligned_cols=117 Identities=18% Similarity=0.097 Sum_probs=100.1
Q ss_pred HHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHcCCH
Q 010439 55 IVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN--ALVRNDDCHTALGVARIKGHI 132 (510)
Q Consensus 55 ~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad--~~~~d~~g~TpL~~A~~~g~~ 132 (510)
.-|+.. +.+--++.+...|.++-.+ +.+..|-||||++.|+-++|++||++|-. ++..|..|.|+||-|+-.++.
T Consensus 871 l~av~~-~D~~klqE~h~~gg~ll~~--~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r 947 (1004)
T KOG0782|consen 871 LRAVLS-SDLMKLQETHLNGGSLLIQ--GPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR 947 (1004)
T ss_pred HHHHHh-ccHHHHHHHHhcCCceEee--CcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch
Confidence 444544 5444455566678888888 77889999999999999999999999853 456789999999999999999
Q ss_pred HHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHHHHhhC
Q 010439 133 NVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (510)
Q Consensus 133 ~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ 177 (510)
.+.++|++.|+.+. ..|..|+||-. -|.+.+..++..+|-.+
T Consensus 948 ~vc~~lvdagasl~--ktd~kg~tp~e-raqqa~d~dlaayle~r 989 (1004)
T KOG0782|consen 948 AVCQLLVDAGASLR--KTDSKGKTPQE-RAQQAGDPDLAAYLESR 989 (1004)
T ss_pred HHHHHHHhcchhhe--ecccCCCChHH-HHHhcCCchHHHHHhhh
Confidence 99999999999998 89999999999 89999999999988654
No 117
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.57 E-value=1.4e-07 Score=94.05 Aligned_cols=87 Identities=26% Similarity=0.401 Sum_probs=73.2
Q ss_pred hHHHHHHHhCCcHH-HHHHHHH-cCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q 010439 52 TPLIVACMDSGLIN-VAKTLIE-LGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIK 129 (510)
Q Consensus 52 TpL~~A~~~~~~~~-~v~~Ll~-~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~ 129 (510)
-|||+++.. ...+ +.+.|+. .+..++.+ |..|.||||+|+..|+...+++|+..|+++..+|+.|++|||.|+..
T Consensus 22 ~~lh~~~~~-~~~~sl~~el~~~~~~~id~~--D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~ 98 (560)
T KOG0522|consen 22 KPLHWAVVT-TDSDSLEQELLAKVSLVIDRR--DPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVST 98 (560)
T ss_pred cccchhhhc-cchhhHHHHHhhhhhceeccc--cCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHc
Confidence 459999987 5444 5554443 34556666 88999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhc
Q 010439 130 GHINVVRAIESH 141 (510)
Q Consensus 130 g~~~~v~~Ll~~ 141 (510)
|+..++..++.+
T Consensus 99 g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 99 GNEQIITEVLRH 110 (560)
T ss_pred CCHHHHHHHHHH
Confidence 999888877765
No 118
>PHA02926 zinc finger-like protein; Provisional
Probab=98.52 E-value=4.8e-08 Score=86.83 Aligned_cols=50 Identities=28% Similarity=0.828 Sum_probs=39.7
Q ss_pred cccccccccccc---------cceEEeCCCCccchHHhHHHHhccC------Ccccccccccccee
Q 010439 455 SSSSCVICWEAP---------VEGACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKINQVI 505 (510)
Q Consensus 455 ~~~~C~iC~~~~---------~~~~~~pCgH~~~C~~C~~~~~~~~------~~Cp~Cr~~i~~~~ 505 (510)
.+.+|.||||.. +-.++.+|+|.| |..|+..|...+ ..||+||..+..++
T Consensus 169 kE~eCgICmE~I~eK~~~~eRrFGIL~~CnHsF-Cl~CIr~Wr~~r~~~~~~rsCPiCR~~f~~I~ 233 (242)
T PHA02926 169 KEKECGICYEVVYSKRLENDRYFGLLDSCNHIF-CITCINIWHRTRRETGASDNCPICRTRFRNIT 233 (242)
T ss_pred CCCCCccCccccccccccccccccccCCCCchH-HHHHHHHHHHhccccCcCCcCCCCcceeeeec
Confidence 346899999873 235777999999 999999998742 35999999887544
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.49 E-value=4.9e-07 Score=95.27 Aligned_cols=123 Identities=17% Similarity=0.125 Sum_probs=102.5
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHcC----CCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQG----ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTP 89 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~Tp 89 (510)
...+.-....|+++|+.-.|+..++.. .++|.+|.-|+++|++|+.+ .+.+++++|++++..+ ..+
T Consensus 22 l~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~n-enle~~eLLl~~~~~~---------gdA 91 (822)
T KOG3609|consen 22 LNEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDN-ENLELQELLLDTSSEE---------GDA 91 (822)
T ss_pred cchhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceeccccc-ccHHHHHHHhcCcccc---------chH
Confidence 344566778899999999999999853 45788899999999999987 8999999999997554 359
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC----------ccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 90 LHHAAKRGLEPTVRLLLSCGANA----------LVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 90 Lh~A~~~g~~~~v~~Ll~~gad~----------~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
|.+|+..|..++|++++.+.... ...-..+.|||++|+..++.||+++|+.+|+.+.
T Consensus 92 LL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 92 LLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 99999999999999999885332 1223457899999999999999999999998775
No 120
>PF14634 zf-RING_5: zinc-RING finger domain
Probab=98.44 E-value=1.5e-07 Score=63.41 Aligned_cols=41 Identities=39% Similarity=0.972 Sum_probs=34.6
Q ss_pred ccccccccc---cceEEeCCCCccchHHhHHHHhccCCccccccc
Q 010439 458 SCVICWEAP---VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 499 (510)
Q Consensus 458 ~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~ 499 (510)
.|.||++.. ..+.+++|||.| |..|+..+......||+||+
T Consensus 1 ~C~~C~~~~~~~~~~~l~~CgH~~-C~~C~~~~~~~~~~CP~C~k 44 (44)
T PF14634_consen 1 HCNICFEKYSEERRPRLTSCGHIF-CEKCLKKLKGKSVKCPICRK 44 (44)
T ss_pred CCcCcCccccCCCCeEEcccCCHH-HHHHHHhhcCCCCCCcCCCC
Confidence 489999887 467888999999 99999999844458999985
No 121
>PF00097 zf-C3HC4: Zinc finger, C3HC4 type (RING finger); InterPro: IPR018957 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid []. Many proteins containing a RING finger play a key role in the ubiquitination pathway []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1CHC_A 2ECW_A 2Y43_B 1V87_A 2DJB_A 2H0D_B 3RPG_C 3KNV_A 2CKL_B 1JM7_A ....
Probab=98.44 E-value=1.3e-07 Score=62.90 Aligned_cols=38 Identities=37% Similarity=0.926 Sum_probs=34.1
Q ss_pred cccccccccceE-EeCCCCccchHHhHHHHhcc--CCccccc
Q 010439 459 CVICWEAPVEGA-CVPCGHMAGCMSCLSEIKAK--KGDCPVC 497 (510)
Q Consensus 459 C~iC~~~~~~~~-~~pCgH~~~C~~C~~~~~~~--~~~Cp~C 497 (510)
|.||++...+.+ +++|||.| |..|+.++... ..+||+|
T Consensus 1 C~iC~~~~~~~~~~~~C~H~f-C~~C~~~~~~~~~~~~CP~C 41 (41)
T PF00097_consen 1 CPICLEPFEDPVILLPCGHSF-CRDCLRKWLENSGSVKCPLC 41 (41)
T ss_dssp ETTTSSBCSSEEEETTTSEEE-EHHHHHHHHHHTSSSBTTTT
T ss_pred CCcCCccccCCCEEecCCCcc-hHHHHHHHHHhcCCccCCcC
Confidence 889999999998 89999999 99999999883 3489998
No 122
>cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H)
Probab=98.41 E-value=1.8e-07 Score=63.40 Aligned_cols=43 Identities=42% Similarity=0.913 Sum_probs=35.5
Q ss_pred ccccccccccceEEeC-CCCccchHHhHHHHhcc-CCccccccccc
Q 010439 458 SCVICWEAPVEGACVP-CGHMAGCMSCLSEIKAK-KGDCPVCRTKI 501 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i 501 (510)
.|.||++.....+.++ |||.| |..|...+... +.+||+||..+
T Consensus 1 ~C~iC~~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~Cp~C~~~~ 45 (45)
T cd00162 1 ECPICLEEFREPVVLLPCGHVF-CRSCIDKWLKSGKNTCPLCRTPI 45 (45)
T ss_pred CCCcCchhhhCceEecCCCChh-cHHHHHHHHHhCcCCCCCCCCcC
Confidence 4999999985555554 99999 99999999876 56899999754
No 123
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.40 E-value=1.5e-07 Score=101.77 Aligned_cols=102 Identities=22% Similarity=0.124 Sum_probs=84.9
Q ss_pred HHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccccccc
Q 010439 71 IELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLR 150 (510)
Q Consensus 71 l~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 150 (510)
+.+++++|...+-..|.|+||.|+..+...++++||..|+++|..|..|+||||.+...|+...+.+|+++|++.+ +.
T Consensus 641 ~~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~--a~ 718 (785)
T KOG0521|consen 641 LAHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPN--AF 718 (785)
T ss_pred hcchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccc--cc
Confidence 3455666543224568899999999999999999999999999999999999999999999999999999999998 88
Q ss_pred ccCCCCHHHHHhhhcCCHHHHHHHh
Q 010439 151 EFYGPSFLEALAPQLMSRKIWVVVI 175 (510)
Q Consensus 151 d~~g~t~L~~~A~~~~~~~~~~~Ll 175 (510)
+.+|+++|+ +|....+.+++-+|.
T Consensus 719 ~~~~~~~l~-~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 719 DPDGKLPLD-IAMEAANADIVLLLR 742 (785)
T ss_pred CccCcchhh-HHhhhccccHHHHHh
Confidence 999999999 776667766666554
No 124
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.38 E-value=1.4e-06 Score=75.67 Aligned_cols=71 Identities=28% Similarity=0.204 Sum_probs=59.9
Q ss_pred CCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 74 GANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCG-ANALVRNDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 74 ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
+.++|.+ |..|||+||.|+..|..+.+.+|+.+| +.+...|..|.+++.+|-+.|+.++|+.|.+.-.+-.
T Consensus 2 e~~in~r--D~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 2 EGNINAR--DAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred CCCccch--hhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 4578887 888999999999999999999999988 8888888899999999999999999888887754443
No 125
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=98.38 E-value=2.6e-07 Score=67.89 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=41.6
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCcccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
..|+||.+...+++..+|||.| |..|+..+......||+|+.++.
T Consensus 2 ~~Cpi~~~~~~~Pv~~~~G~v~-~~~~i~~~~~~~~~cP~~~~~~~ 46 (63)
T smart00504 2 FLCPISLEVMKDPVILPSGQTY-ERRAIEKWLLSHGTDPVTGQPLT 46 (63)
T ss_pred cCCcCCCCcCCCCEECCCCCEE-eHHHHHHHHHHCCCCCCCcCCCC
Confidence 4799999999999999999999 99999999887778999999884
No 126
>TIGR00599 rad18 DNA repair protein rad18. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.36 E-value=2.6e-07 Score=91.78 Aligned_cols=50 Identities=24% Similarity=0.549 Sum_probs=44.1
Q ss_pred CCcccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 453 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 453 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
.+....|.||++.+.+++.++|||.| |..|+..+......||+||..+..
T Consensus 23 Le~~l~C~IC~d~~~~PvitpCgH~F-Cs~CI~~~l~~~~~CP~Cr~~~~~ 72 (397)
T TIGR00599 23 LDTSLRCHICKDFFDVPVLTSCSHTF-CSLCIRRCLSNQPKCPLCRAEDQE 72 (397)
T ss_pred cccccCCCcCchhhhCccCCCCCCch-hHHHHHHHHhCCCCCCCCCCcccc
Confidence 34457999999999999999999999 999999998777789999998753
No 127
>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.33 E-value=2.2e-07 Score=84.87 Aligned_cols=46 Identities=43% Similarity=0.995 Sum_probs=39.4
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhc-cCC-cccccccccc
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKG-DCPVCRTKIN 502 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~-~Cp~Cr~~i~ 502 (510)
+..|.||++.+-.++..||||.| |+.|+..++. ++. .||+||+.+.
T Consensus 215 d~kC~lC~e~~~~ps~t~CgHlF-C~~Cl~~~~t~~k~~~CplCRak~~ 262 (271)
T COG5574 215 DYKCFLCLEEPEVPSCTPCGHLF-CLSCLLISWTKKKYEFCPLCRAKVY 262 (271)
T ss_pred ccceeeeecccCCcccccccchh-hHHHHHHHHHhhccccCchhhhhcc
Confidence 36899999999999999999999 9999998444 333 5999999874
No 128
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.33 E-value=6.4e-07 Score=97.06 Aligned_cols=100 Identities=29% Similarity=0.388 Sum_probs=87.6
Q ss_pred HHcCCCCcccC--CCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCcc
Q 010439 37 RSQGASLEWMD--KEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALV 114 (510)
Q Consensus 37 l~~g~~~~~~d--~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~ 114 (510)
+.+++++|..+ ..|.|+||.|+.. +..-++++||+.|+++|.. |..|+||||.+...|+...+.+|++.|++.++
T Consensus 641 ~~~~~~~n~~~~~~~~~s~lh~a~~~-~~~~~~e~ll~~ga~vn~~--d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a 717 (785)
T KOG0521|consen 641 LAHGCCENWPVVLCIGCSLLHVAVGT-GDSGAVELLLQNGADVNAL--DSKGRTPLHHATASGHTSIACLLLKRGADPNA 717 (785)
T ss_pred hcchhhhccchhhhcccchhhhhhcc-chHHHHHHHHhcCCcchhh--hccCCCcchhhhhhcccchhhhhccccccccc
Confidence 33455555533 5689999999997 9999999999999999999 99999999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHH
Q 010439 115 RNDDCHTALGVARIKGHINVVRAIE 139 (510)
Q Consensus 115 ~d~~g~TpL~~A~~~g~~~~v~~Ll 139 (510)
.+.+|+++|++|....+.+++-+|.
T Consensus 718 ~~~~~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 718 FDPDGKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cCccCcchhhHHhhhccccHHHHHh
Confidence 9999999999998877777665554
No 129
>smart00184 RING Ring finger. E3 ubiquitin-protein ligase activity is intrinsic to the RING domain of c-Cbl and is likely to be a general function of this domain; Various RING fingers exhibit binding activity towards E2 ubiquitin-conjugating enzymes (Ubc' s)
Probab=98.31 E-value=4.9e-07 Score=59.03 Aligned_cols=38 Identities=37% Similarity=0.988 Sum_probs=33.9
Q ss_pred cccccccccceEEeCCCCccchHHhHHHHhc-cCCccccc
Q 010439 459 CVICWEAPVEGACVPCGHMAGCMSCLSEIKA-KKGDCPVC 497 (510)
Q Consensus 459 C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~C 497 (510)
|.||++.....+.++|||.| |..|...|.. .+..||+|
T Consensus 1 C~iC~~~~~~~~~~~C~H~~-c~~C~~~~~~~~~~~CP~C 39 (39)
T smart00184 1 CPICLEELKDPVVLPCGHTF-CRSCIRKWLKSGNNTCPIC 39 (39)
T ss_pred CCcCccCCCCcEEecCCChH-HHHHHHHHHHhCcCCCCCC
Confidence 78999999999999999998 9999999877 44579987
No 130
>PF13445 zf-RING_UBOX: RING-type zinc-finger; PDB: 2CT2_A.
Probab=98.29 E-value=3.6e-07 Score=60.53 Aligned_cols=35 Identities=40% Similarity=0.938 Sum_probs=22.1
Q ss_pred cccccccccc----eEEeCCCCccchHHhHHHHhccC----Cccc
Q 010439 459 CVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKK----GDCP 495 (510)
Q Consensus 459 C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~----~~Cp 495 (510)
|+||.+ +.+ ++.++|||.| |..|+.+|...+ -+||
T Consensus 1 CpIc~e-~~~~~n~P~~L~CGH~~-c~~cl~~l~~~~~~~~~kCP 43 (43)
T PF13445_consen 1 CPICKE-FSTEENPPMVLPCGHVF-CKDCLQKLSKKSDRNRFKCP 43 (43)
T ss_dssp -TTT-----TTSS-EEE-SSS-EE-EHHHHHHHHHH-S-S-B--T
T ss_pred CCcccc-ccCCCCCCEEEeCccHH-HHHHHHHHHhcCCCCeeeCc
Confidence 899999 777 8999999999 999999998743 1576
No 131
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.29 E-value=1.6e-06 Score=75.38 Aligned_cols=65 Identities=23% Similarity=0.230 Sum_probs=40.9
Q ss_pred CCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcC-CCccccCCCCCCChHHHHHHHcCCHHHHHHHHHC
Q 010439 41 ASLEWMDKEGKTPLIVACMDSGLINVAKTLIELG-ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC 108 (510)
Q Consensus 41 ~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~g-a~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 108 (510)
.++|.+|.+|+||||.|+.. |+.+.+.+|+.+| +.+... |..|.+++.+|-+.|+.++++.|.+.
T Consensus 3 ~~in~rD~fgWTalmcaa~e-g~~eavsyllgrg~a~vgv~--d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAME-GSNEAVSYLLGRGVAFVGVT--DESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CCccchhhhcchHHHHHhhh-cchhHHHHHhccCccccccc--ccccchHHHHHHhcChHHHHHHHHHH
Confidence 45566666666666666665 6666666666666 566655 56666666666666666666666654
No 132
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.27 E-value=2.5e-06 Score=90.09 Aligned_cols=126 Identities=22% Similarity=0.172 Sum_probs=101.6
Q ss_pred CCChHHHHHHHhCCcHHHHHHHHHcC----CCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHH
Q 010439 49 EGKTPLIVACMDSGLINVAKTLIELG----ANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALG 124 (510)
Q Consensus 49 ~g~TpL~~A~~~~~~~~~v~~Ll~~g----a~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~ 124 (510)
.+.--...|+.+ |+.-.|+..++.. .++|.+ |.-|+++|+.|+.+.+.+++++|++++..+ ..+|.
T Consensus 24 ~~e~~fL~a~E~-gd~~~V~k~l~~~~~~~lninc~--d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL 93 (822)
T KOG3609|consen 24 EGEKGFLLAHEN-GDVPLVAKALEYKAVSKLNINCR--DPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALL 93 (822)
T ss_pred hhhHHHHHHHHc-CChHHHHHHHHhccccccchhcc--ChHhhhceecccccccHHHHHHHhcCcccc-------chHHH
Confidence 344556678888 8888888887653 456777 889999999999999999999999987654 35899
Q ss_pred HHHHcCCHHHHHHHHhccccccc--------cccccCCCCHHHHHhhhcCCHHHHHHHhhCCCCCCCCC
Q 010439 125 VARIKGHINVVRAIESHICYFCG--------WLREFYGPSFLEALAPQLMSRKIWVVVIPCGTANPSKP 185 (510)
Q Consensus 125 ~A~~~g~~~~v~~Ll~~ga~~~~--------~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ga~~~~~~ 185 (510)
+|+..|.+++|++|+.+.....+ -..-.-+.|||. +|+..++.||+++||.+|+.+....
T Consensus 94 ~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPli-LAAh~NnyEil~~Ll~kg~~i~~PH 161 (822)
T KOG3609|consen 94 LAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLM-LAAHLNNFEILQCLLTRGHCIPIPH 161 (822)
T ss_pred HHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHH-HHHHhcchHHHHHHHHcCCCCCCCc
Confidence 99999999999999988644311 012234689999 9999999999999999999886544
No 133
>KOG2164 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=5.8e-07 Score=89.67 Aligned_cols=52 Identities=29% Similarity=0.768 Sum_probs=43.9
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccC-----Cccccccccccc--eeEee
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-----GDCPVCRTKINQ--VIRLY 508 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-----~~Cp~Cr~~i~~--~~~i~ 508 (510)
...|+||++.+.-++...|||.| |..|+.+.+... ++||+||..|.- ...+|
T Consensus 186 ~~~CPICL~~~~~p~~t~CGHiF-C~~CiLqy~~~s~~~~~~~CPiC~s~I~~kdl~pv~ 244 (513)
T KOG2164|consen 186 DMQCPICLEPPSVPVRTNCGHIF-CGPCILQYWNYSAIKGPCSCPICRSTITLKDLLPVF 244 (513)
T ss_pred CCcCCcccCCCCcccccccCcee-eHHHHHHHHhhhcccCCccCCchhhhccccceeeee
Confidence 46899999999999999999999 999999988754 479999999875 44443
No 134
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.19 E-value=1.5e-06 Score=93.64 Aligned_cols=122 Identities=25% Similarity=0.168 Sum_probs=61.8
Q ss_pred cCCchHHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCChHHHHHHHhCCcHHHHHHHH-HcCCCccccCCCCCCChHHH
Q 010439 14 RQSKDELLYQWVIAGDVDAIRALRSQ-GASLEWMDKEGKTPLIVACMDSGLINVAKTLI-ELGANINAYRPGGRGGTPLH 91 (510)
Q Consensus 14 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll-~~ga~~n~~~~d~~g~TpLh 91 (510)
...|++.||+++..+..-+++.+++- |......|.+|+-.+|+++ . ++++++.+|+ -.|..++++ |..||||||
T Consensus 571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~-lg~ewA~ll~~~~~~ai~i~--D~~G~tpL~ 646 (975)
T KOG0520|consen 571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-A-LGYEWAFLPISADGVAIDIR--DRNGWTPLH 646 (975)
T ss_pred CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-h-cCCceeEEEEeecccccccc--cCCCCcccc
Confidence 34455555555555555555555553 4444444555555555533 2 3444444443 334555555 555555555
Q ss_pred HHHHcCCHHHHHHHHHCCCCCc------cCCCCCCcHHHHHHHcCCHHHHHHHH
Q 010439 92 HAAKRGLEPTVRLLLSCGANAL------VRNDDCHTALGVARIKGHINVVRAIE 139 (510)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~gad~~------~~d~~g~TpL~~A~~~g~~~~v~~Ll 139 (510)
+|+.+|+..++..|++.|++.. ..+-.|.|+-.+|..+|+..+.-+|-
T Consensus 647 wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~ls 700 (975)
T KOG0520|consen 647 WAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLS 700 (975)
T ss_pred hHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHh
Confidence 5555555555555555544322 22223555555555555555544443
No 135
>PF12678 zf-rbx1: RING-H2 zinc finger; InterPro: IPR024766 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This domain constitutes a conserved region found in proteins that participate in diverse functions relevant to chromosome metabolism and cell cycle control [].The domain contains 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding.; PDB: 4A0C_D 4A0L_I 4A0K_B 2ECL_A 1LDK_C 3RTR_F 3DQV_Y 1U6G_B 1LDJ_B 2HYE_D ....
Probab=98.17 E-value=1.6e-06 Score=65.37 Aligned_cols=41 Identities=34% Similarity=0.853 Sum_probs=33.6
Q ss_pred cccccccccc-------------cceEEeCCCCccchHHhHHHHhccCCcccccc
Q 010439 457 SSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCR 498 (510)
Q Consensus 457 ~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr 498 (510)
..|.||++.. ..++..+|||.| +..|+.+|...+..||+||
T Consensus 20 d~C~IC~~~l~~~~~~~~~~~~~~~i~~~~C~H~F-H~~Ci~~Wl~~~~~CP~CR 73 (73)
T PF12678_consen 20 DNCAICREPLEDPCPECQAPQDECPIVWGPCGHIF-HFHCISQWLKQNNTCPLCR 73 (73)
T ss_dssp SBETTTTSBTTSTTCCHHHCTTTS-EEEETTSEEE-EHHHHHHHHTTSSB-TTSS
T ss_pred CcccccChhhhChhhhhcCCccccceEecccCCCE-EHHHHHHHHhcCCcCCCCC
Confidence 3599999876 344566899999 9999999998888999998
No 136
>KOG0287 consensus Postreplication repair protein RAD18 [Replication, recombination and repair]
Probab=98.16 E-value=6.3e-07 Score=84.10 Aligned_cols=48 Identities=27% Similarity=0.645 Sum_probs=44.0
Q ss_pred cccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 455 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
+...|.||+|-+..+++.||+|.| |..|+......++.||.|+.++.+
T Consensus 22 ~lLRC~IC~eyf~ip~itpCsHtf-CSlCIR~~L~~~p~CP~C~~~~~E 69 (442)
T KOG0287|consen 22 DLLRCGICFEYFNIPMITPCSHTF-CSLCIRKFLSYKPQCPTCCVTVTE 69 (442)
T ss_pred HHHHHhHHHHHhcCceeccccchH-HHHHHHHHhccCCCCCceecccch
Confidence 346899999999999999999999 999999999888899999998864
No 137
>COG5432 RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Probab=98.09 E-value=1.8e-06 Score=79.32 Aligned_cols=46 Identities=28% Similarity=0.547 Sum_probs=42.8
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
..|-||-+..+.++..+|||.| |+.|+.+.....+.||+||.+...
T Consensus 26 lrC~IC~~~i~ip~~TtCgHtF-CslCIR~hL~~qp~CP~Cr~~~~e 71 (391)
T COG5432 26 LRCRICDCRISIPCETTCGHTF-CSLCIRRHLGTQPFCPVCREDPCE 71 (391)
T ss_pred HHhhhhhheeecceecccccch-hHHHHHHHhcCCCCCccccccHHh
Confidence 6899999999999999999999 999999999888899999998754
No 138
>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]
Probab=98.08 E-value=6.2e-07 Score=93.96 Aligned_cols=51 Identities=24% Similarity=0.621 Sum_probs=44.7
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhcc-CCcccccccccc--ceeEee
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN--QVIRLY 508 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~--~~~~i~ 508 (510)
..|++|.++++++|+..|||.| |+.|+...... .++||.|.+++. ++.+||
T Consensus 644 LkCs~Cn~R~Kd~vI~kC~H~F-C~~Cvq~r~etRqRKCP~Cn~aFganDv~~I~ 697 (698)
T KOG0978|consen 644 LKCSVCNTRWKDAVITKCGHVF-CEECVQTRYETRQRKCPKCNAAFGANDVHRIH 697 (698)
T ss_pred eeCCCccCchhhHHHHhcchHH-HHHHHHHHHHHhcCCCCCCCCCCCcccccccC
Confidence 4799999999999999999999 99999776654 468999999995 688876
No 139
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.07 E-value=2.2e-05 Score=75.36 Aligned_cols=56 Identities=36% Similarity=0.471 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCC
Q 010439 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGA 75 (510)
Q Consensus 19 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga 75 (510)
--|..|++.|+++.|+.|++.|.++|.+|+...+||.+|+.- ||.++|++||+.||
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLc-GHe~vvklLLenGA 93 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLC-GHEDVVKLLLENGA 93 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHc-CcHHHHHHHHHcCC
Confidence 345556666666666666666666666666666666666654 56666666666655
No 140
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.06 E-value=1.5e-05 Score=76.35 Aligned_cols=85 Identities=28% Similarity=0.307 Sum_probs=68.7
Q ss_pred ChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC
Q 010439 51 KTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKG 130 (510)
Q Consensus 51 ~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g 130 (510)
.--|.+||+. |..+.|+.|++.|.++|.+ |....+||.+|+..||..+|++||+.|+-...-.-+|.- -||++.+.
T Consensus 37 f~elceacR~-GD~d~v~~LVetgvnVN~v--D~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R-C~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCEACRA-GDVDRVRYLVETGVNVNAV--DRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR-CHYGALND 112 (516)
T ss_pred hHHHHHHhhc-ccHHHHHHHHHhCCCcchh--hcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch-hhhhhhhH
Confidence 5568999997 9999999999999999999 899999999999999999999999999865544445544 36666653
Q ss_pred CHHHHHHHHhc
Q 010439 131 HINVVRAIESH 141 (510)
Q Consensus 131 ~~~~v~~Ll~~ 141 (510)
.|-+.|++.
T Consensus 113 --~IR~mllsy 121 (516)
T KOG0511|consen 113 --RIRRMLLSY 121 (516)
T ss_pred --HHHHHHHHH
Confidence 344555554
No 141
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.05 E-value=5e-06 Score=89.74 Aligned_cols=129 Identities=15% Similarity=-0.030 Sum_probs=101.4
Q ss_pred cccCCCCChHHHHHHHhCCcHHHHHHHHHc-CCCccccCCCCCCChHHHHHHHcCCHHHHHHH-HHCCCCCccCCCCCCc
Q 010439 44 EWMDKEGKTPLIVACMDSGLINVAKTLIEL-GANINAYRPGGRGGTPLHHAAKRGLEPTVRLL-LSCGANALVRNDDCHT 121 (510)
Q Consensus 44 ~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~-ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~L-l~~gad~~~~d~~g~T 121 (510)
......|+|-||+++.. +..-+++.+++- |-..... |.+|...+|+++ .++.+..-+| .-.|..++.+|..|+|
T Consensus 568 ~~~~~r~~lllhL~a~~-lyawLie~~~e~~~~~~~el--d~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~t 643 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAEL-LYAWLIEKVIEWAGSGDLEL--DRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWT 643 (975)
T ss_pred ccCCCcchHHHHHHHHH-hHHHHHHHHhcccccCchhh--cccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCc
Confidence 33456799999999988 888889998885 6555555 777888888844 4555555444 4568899999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhccccccc----cccccCCCCHHHHHhhhcCCHHHHHHHhhC
Q 010439 122 ALGVARIKGHINVVRAIESHICYFCG----WLREFYGPSFLEALAPQLMSRKIWVVVIPC 177 (510)
Q Consensus 122 pL~~A~~~g~~~~v~~Ll~~ga~~~~----~~~d~~g~t~L~~~A~~~~~~~~~~~Ll~~ 177 (510)
|||+|+.+|+..++..|++.|++... ....-.|.|+-. +|..+|+..+..+|-+.
T Consensus 644 pL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~-la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 644 PLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD-LARANGHKGIAGYLSEK 702 (975)
T ss_pred ccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh-hhhcccccchHHHHhhh
Confidence 99999999999999999988876541 123446899999 89999999998888655
No 142
>KOG1100 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.95 E-value=2.3e-06 Score=78.07 Aligned_cols=47 Identities=28% Similarity=0.695 Sum_probs=42.6
Q ss_pred ccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccceeEee
Q 010439 458 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 508 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i~ 508 (510)
.|..|.++...++++||.|.+.|..|...+.. ||+|+.++...+.+|
T Consensus 160 ~Cr~C~~~~~~VlllPCrHl~lC~~C~~~~~~----CPiC~~~~~s~~~v~ 206 (207)
T KOG1100|consen 160 SCRKCGEREATVLLLPCRHLCLCGICDESLRI----CPICRSPKTSSVEVN 206 (207)
T ss_pred cceecCcCCceEEeecccceEecccccccCcc----CCCCcChhhceeecc
Confidence 49999999999999999999999999876443 999999999988876
No 143
>COG5540 RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.93 E-value=4.3e-06 Score=77.53 Aligned_cols=49 Identities=29% Similarity=0.617 Sum_probs=40.0
Q ss_pred CCcccccccccccc---cceEEeCCCCccchHHhHHHHhc-cCCcccccccccc
Q 010439 453 DGSSSSCVICWEAP---VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTKIN 502 (510)
Q Consensus 453 ~~~~~~C~iC~~~~---~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~ 502 (510)
.+..-+|.|||+.+ ...+.+||.|.| ...|+++|.. .+.+||+||.++.
T Consensus 320 a~~GveCaICms~fiK~d~~~vlPC~H~F-H~~Cv~kW~~~y~~~CPvCrt~iP 372 (374)
T COG5540 320 ADKGVECAICMSNFIKNDRLRVLPCDHRF-HVGCVDKWLLGYSNKCPVCRTAIP 372 (374)
T ss_pred cCCCceEEEEhhhhcccceEEEeccCcee-chhHHHHHHhhhcccCCccCCCCC
Confidence 34447999999874 236678999999 9999999987 5668999999874
No 144
>COG5243 HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones]
Probab=97.93 E-value=4.3e-06 Score=79.57 Aligned_cols=45 Identities=29% Similarity=0.874 Sum_probs=38.4
Q ss_pred ccccccccccc-------------cceEEeCCCCccchHHhHHHHhccCCccccccccc
Q 010439 456 SSSCVICWEAP-------------VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI 501 (510)
Q Consensus 456 ~~~C~iC~~~~-------------~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i 501 (510)
+..|.||||.. ..+.-+||||.+ ...|.+.|.+++..||+||.++
T Consensus 287 D~~C~ICmde~~h~~~~~~~~~~~~~pKrLpCGHil-Hl~CLknW~ERqQTCPICr~p~ 344 (491)
T COG5243 287 DRTCTICMDEMFHPDHEPLPRGLDMTPKRLPCGHIL-HLHCLKNWLERQQTCPICRRPV 344 (491)
T ss_pred CCeEEEecccccCCCCccCcccccCCccccccccee-eHHHHHHHHHhccCCCcccCcc
Confidence 36899999972 223578999999 9999999999888999999995
No 145
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=97.84 E-value=1.7e-05 Score=59.94 Aligned_cols=48 Identities=21% Similarity=0.282 Sum_probs=39.1
Q ss_pred cccccccccccccceEEeCCCCccchHHhHHHHhcc-CCccccccccccc
Q 010439 455 SSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 503 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 503 (510)
+...|+||.+...++|.+||||.| +..|+.+|... ...||+|+.++..
T Consensus 3 ~~f~CpIt~~lM~dPVi~~~G~ty-er~~I~~~l~~~~~~~P~t~~~l~~ 51 (73)
T PF04564_consen 3 DEFLCPITGELMRDPVILPSGHTY-ERSAIERWLEQNGGTDPFTRQPLSE 51 (73)
T ss_dssp GGGB-TTTSSB-SSEEEETTSEEE-EHHHHHHHHCTTSSB-TTT-SB-SG
T ss_pred cccCCcCcCcHhhCceeCCcCCEE-cHHHHHHHHHcCCCCCCCCCCcCCc
Confidence 457999999999999999999999 99999999988 5689999998875
No 146
>KOG0824 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.83 E-value=6.2e-06 Score=76.74 Aligned_cols=48 Identities=27% Similarity=0.625 Sum_probs=41.9
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccC-Ccccccccccccee
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQVI 505 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~~~ 505 (510)
.+|.||+....-++.++|+|.| |+.|++...... +.|++||.+|.+.|
T Consensus 8 ~eC~IC~nt~n~Pv~l~C~HkF-CyiCiKGsy~ndk~~CavCR~pids~i 56 (324)
T KOG0824|consen 8 KECLICYNTGNCPVNLYCFHKF-CYICIKGSYKNDKKTCAVCRFPIDSTI 56 (324)
T ss_pred CcceeeeccCCcCccccccchh-hhhhhcchhhcCCCCCceecCCCCcch
Confidence 5899999999889999999999 999998876554 46999999998754
No 147
>KOG4628 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=1.5e-05 Score=77.25 Aligned_cols=46 Identities=28% Similarity=0.689 Sum_probs=38.5
Q ss_pred ccccccccccc---ceEEeCCCCccchHHhHHHHhccCC-ccccccccccc
Q 010439 457 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~~~~~-~Cp~Cr~~i~~ 503 (510)
..|.||+|.+. ....+||+|.| ...|++.|..+.+ .||+|+..+..
T Consensus 230 ~~CaIClEdY~~GdklRiLPC~H~F-H~~CIDpWL~~~r~~CPvCK~di~~ 279 (348)
T KOG4628|consen 230 DTCAICLEDYEKGDKLRILPCSHKF-HVNCIDPWLTQTRTFCPVCKRDIRT 279 (348)
T ss_pred ceEEEeecccccCCeeeEecCCCch-hhccchhhHhhcCccCCCCCCcCCC
Confidence 48999999864 34467999999 9999999998876 59999997754
No 148
>KOG4692 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.68 E-value=2e-05 Score=74.51 Aligned_cols=51 Identities=27% Similarity=0.785 Sum_probs=44.7
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHHhccCCcccccccccccee
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVI 505 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~ 505 (510)
.++..|+||+..+.+.||.||+|.- |+.|+.+..-..+.|=.|+..+...+
T Consensus 420 sEd~lCpICyA~pi~Avf~PC~H~S-C~~CI~qHlmN~k~CFfCktTv~~~~ 470 (489)
T KOG4692|consen 420 SEDNLCPICYAGPINAVFAPCSHRS-CYGCITQHLMNCKRCFFCKTTVIDVI 470 (489)
T ss_pred cccccCcceecccchhhccCCCCch-HHHHHHHHHhcCCeeeEecceeeehh
Confidence 4557999999999999999999999 99999988776778999999887544
No 149
>KOG1785 consensus Tyrosine kinase negative regulator CBL [Defense mechanisms]
Probab=97.55 E-value=3.2e-05 Score=74.38 Aligned_cols=48 Identities=38% Similarity=0.857 Sum_probs=42.6
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccC-C-cccccccccccee
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-G-DCPVCRTKINQVI 505 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~-~Cp~Cr~~i~~~~ 505 (510)
..|-||-|+.+++..-||||.. |..|...|.... + .||.||..|...-
T Consensus 370 eLCKICaendKdvkIEPCGHLl-Ct~CLa~WQ~sd~gq~CPFCRcEIKGte 419 (563)
T KOG1785|consen 370 ELCKICAENDKDVKIEPCGHLL-CTSCLAAWQDSDEGQTCPFCRCEIKGTE 419 (563)
T ss_pred HHHHHhhccCCCcccccccchH-HHHHHHhhcccCCCCCCCceeeEecccc
Confidence 5899999999999999999999 999999998654 3 7999999997643
No 150
>KOG2177 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.47 E-value=4.2e-05 Score=76.17 Aligned_cols=45 Identities=38% Similarity=0.775 Sum_probs=39.2
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccc
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRT 499 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~ 499 (510)
.+...|.||++.+..++.+||||.| |..|+..++...-.||.||.
T Consensus 11 ~~~~~C~iC~~~~~~p~~l~C~H~~-c~~C~~~~~~~~~~Cp~cr~ 55 (386)
T KOG2177|consen 11 QEELTCPICLEYFREPVLLPCGHNF-CRACLTRSWEGPLSCPVCRP 55 (386)
T ss_pred cccccChhhHHHhhcCccccccchH-hHHHHHHhcCCCcCCcccCC
Confidence 4557999999999999999999999 99999999863337999994
No 151
>PF14835 zf-RING_6: zf-RING of BARD1-type protein; PDB: 1JM7_B.
Probab=97.40 E-value=2.2e-05 Score=55.77 Aligned_cols=43 Identities=35% Similarity=0.871 Sum_probs=23.1
Q ss_pred cccccccccccceEE-eCCCCccchHHhHHHHhccCCcccccccccc
Q 010439 457 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
..|.+|.+..+.+|. ..|.|.| |..|+..-.. ..||+|+.|..
T Consensus 8 LrCs~C~~~l~~pv~l~~CeH~f-Cs~Ci~~~~~--~~CPvC~~Paw 51 (65)
T PF14835_consen 8 LRCSICFDILKEPVCLGGCEHIF-CSSCIRDCIG--SECPVCHTPAW 51 (65)
T ss_dssp TS-SSS-S--SS-B---SSS--B--TTTGGGGTT--TB-SSS--B-S
T ss_pred cCCcHHHHHhcCCceeccCccHH-HHHHhHHhcC--CCCCCcCChHH
Confidence 589999999999975 5899999 9999866432 25999998874
No 152
>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=97.39 E-value=0.00016 Score=68.45 Aligned_cols=56 Identities=34% Similarity=0.742 Sum_probs=44.8
Q ss_pred CCCCCCCcccccccccccccceEEeCCCCccchHHhHHHHhcc--CCccccccccccce
Q 010439 448 SNVKDDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKINQV 504 (510)
Q Consensus 448 ~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~~~ 504 (510)
+..+.+++...|.||-+...-...+||+|.. |..|+-++... .+.||+||..-..+
T Consensus 53 SaddtDEen~~C~ICA~~~TYs~~~PC~H~~-CH~Ca~RlRALY~~K~C~~CrTE~e~V 110 (493)
T COG5236 53 SADDTDEENMNCQICAGSTTYSARYPCGHQI-CHACAVRLRALYMQKGCPLCRTETEAV 110 (493)
T ss_pred cccccccccceeEEecCCceEEEeccCCchH-HHHHHHHHHHHHhccCCCccccccceE
Confidence 3334456668999999998888889999999 99999988753 56899999876544
No 153
>PF12861 zf-Apc11: Anaphase-promoting complex subunit 11 RING-H2 finger
Probab=97.34 E-value=0.00018 Score=54.68 Aligned_cols=33 Identities=30% Similarity=0.644 Sum_probs=27.2
Q ss_pred eEEeCCCCccchHHhHHHHhcc---CCcccccccccc
Q 010439 469 GACVPCGHMAGCMSCLSEIKAK---KGDCPVCRTKIN 502 (510)
Q Consensus 469 ~~~~pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~ 502 (510)
.+.-.|+|.| ...|+.+|... +..||+||++..
T Consensus 47 lv~g~C~H~F-H~hCI~kWl~~~~~~~~CPmCR~~w~ 82 (85)
T PF12861_consen 47 LVWGKCSHNF-HMHCILKWLSTQSSKGQCPMCRQPWK 82 (85)
T ss_pred eeeccCccHH-HHHHHHHHHccccCCCCCCCcCCeee
Confidence 3455799999 99999999875 358999999764
No 154
>KOG4159 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.25 E-value=0.00016 Score=72.28 Aligned_cols=49 Identities=31% Similarity=0.807 Sum_probs=43.8
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
..+..|.||+..+..++..||||.+ |..|+.+...++..||.||.++.+
T Consensus 82 ~sef~c~vc~~~l~~pv~tpcghs~-c~~Cl~r~ld~~~~cp~Cr~~l~e 130 (398)
T KOG4159|consen 82 RSEFECCVCSRALYPPVVTPCGHSF-CLECLDRSLDQETECPLCRDELVE 130 (398)
T ss_pred cchhhhhhhHhhcCCCccccccccc-cHHHHHHHhccCCCCccccccccc
Confidence 3457999999999999999999999 999999987777799999998875
No 155
>KOG0802 consensus E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.21 E-value=0.00013 Score=77.40 Aligned_cols=47 Identities=36% Similarity=0.767 Sum_probs=41.2
Q ss_pred cccccccccccccc-----eEEeCCCCccchHHhHHHHhccCCcccccccccc
Q 010439 455 SSSSCVICWEAPVE-----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 455 ~~~~C~iC~~~~~~-----~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
....|.||+|.... +..+||+|.| |..|...|-+++..||+||..+.
T Consensus 290 ~~~~C~IC~e~l~~~~~~~~~rL~C~Hif-h~~CL~~W~er~qtCP~CR~~~~ 341 (543)
T KOG0802|consen 290 SDELCIICLEELHSGHNITPKRLPCGHIF-HDSCLRSWFERQQTCPTCRTVLY 341 (543)
T ss_pred cCCeeeeechhhccccccccceeecccch-HHHHHHHHHHHhCcCCcchhhhh
Confidence 34689999999877 6888999999 99999999998889999999543
No 156
>PF14447 Prok-RING_4: Prokaryotic RING finger family 4
Probab=97.17 E-value=0.00014 Score=50.05 Aligned_cols=44 Identities=32% Similarity=0.865 Sum_probs=36.1
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
..|..|.......+++||||.+ |..|...... ..||+|..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~pCgH~I-~~~~f~~~rY--ngCPfC~~~~~~ 51 (55)
T PF14447_consen 8 QPCVFCGFVGTKGTVLPCGHLI-CDNCFPGERY--NGCPFCGTPFEF 51 (55)
T ss_pred eeEEEcccccccccccccccee-eccccChhhc--cCCCCCCCcccC
Confidence 5799999998888899999999 9999655433 249999998863
No 157
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.07 E-value=0.00024 Score=69.45 Aligned_cols=50 Identities=32% Similarity=0.702 Sum_probs=40.5
Q ss_pred cccccccccccccceE-----E---eCCCCccchHHhHHHHh--cc-----CCcccccccccccee
Q 010439 455 SSSSCVICWEAPVEGA-----C---VPCGHMAGCMSCLSEIK--AK-----KGDCPVCRTKINQVI 505 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~-----~---~pCgH~~~C~~C~~~~~--~~-----~~~Cp~Cr~~i~~~~ 505 (510)
.+..|.|||+.....+ + .+|-|.| |..|+..|. .+ .+.||.||.+...++
T Consensus 160 ~~k~CGICme~i~ek~~~~~rfgilpnC~H~~-Cl~Cir~wr~~~q~~~~~sksCP~CRv~s~~v~ 224 (344)
T KOG1039|consen 160 SEKECGICMETINEKAASERRFGILPNCNHSF-CLNCIRKWRQATQFESKTSKSCPFCRVPSSFVN 224 (344)
T ss_pred ccccceehhhhccccchhhhhcccCCCcchhh-hhcHhHhhhhhhccccccccCCCcccCcccccc
Confidence 3468999999876665 4 6799999 999999998 33 467999999877554
No 158
>KOG0311 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=97.04 E-value=8.6e-05 Score=70.84 Aligned_cols=50 Identities=24% Similarity=0.554 Sum_probs=38.6
Q ss_pred cccccccccccccceEEe-CCCCccchHHhHHHHhc-cCCcccccccccccee
Q 010439 455 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKA-KKGDCPVCRTKINQVI 505 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i~~~~ 505 (510)
.+..|.||++..+..... -|+|.| |+.|+..-.. .+..||.||+......
T Consensus 42 ~~v~c~icl~llk~tmttkeClhrf-c~~ci~~a~r~gn~ecptcRk~l~Skr 93 (381)
T KOG0311|consen 42 IQVICPICLSLLKKTMTTKECLHRF-CFDCIWKALRSGNNECPTCRKKLVSKR 93 (381)
T ss_pred hhhccHHHHHHHHhhcccHHHHHHH-HHHHHHHHHHhcCCCCchHHhhccccc
Confidence 346899999997655544 699999 9999866544 4568999999887543
No 159
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.87 E-value=0.0021 Score=64.32 Aligned_cols=67 Identities=19% Similarity=0.089 Sum_probs=55.7
Q ss_pred CcHHHHHHHHHcCCCccccC----CCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q 010439 62 GLINVAKTLIELGANINAYR----PGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARI 128 (510)
Q Consensus 62 ~~~~~v~~Ll~~ga~~n~~~----~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~ 128 (510)
.-.+.++.|.+++++.|..- .+..--|+||||+..|..++|.+||+.|+|+..+|..|+||..++..
T Consensus 402 ~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 402 PEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred CchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCccccccc
Confidence 33678889999988886631 13446799999999999999999999999999999999999998873
No 160
>KOG2879 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.82 E-value=0.0011 Score=61.24 Aligned_cols=46 Identities=26% Similarity=0.780 Sum_probs=36.9
Q ss_pred ccccccccccccceEEe-CCCCccchHHhHHHHhcc--CCcccccccccc
Q 010439 456 SSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 502 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 502 (510)
..+|++|-+.+..+... +|||.+ |+.|+..-... .-.||.|...+.
T Consensus 239 ~~~C~~Cg~~PtiP~~~~~C~Hiy-CY~Ci~ts~~~~asf~Cp~Cg~~~~ 287 (298)
T KOG2879|consen 239 DTECPVCGEPPTIPHVIGKCGHIY-CYYCIATSRLWDASFTCPLCGENVE 287 (298)
T ss_pred CceeeccCCCCCCCeeecccccee-ehhhhhhhhcchhhcccCccCCCCc
Confidence 36899999999888766 599999 99998654432 347999988776
No 161
>PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B.
Probab=96.77 E-value=0.00078 Score=45.35 Aligned_cols=42 Identities=31% Similarity=0.755 Sum_probs=20.9
Q ss_pred cccccccc--cceEEe--CCCCccchHHhHHHHhc-cCCccccccccc
Q 010439 459 CVICWEAP--VEGACV--PCGHMAGCMSCLSEIKA-KKGDCPVCRTKI 501 (510)
Q Consensus 459 C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~i 501 (510)
|++|.+.. .+.-+. +||+.+ |..|..++.. ..++||-||++.
T Consensus 1 cp~C~e~~d~~d~~~~PC~Cgf~I-C~~C~~~i~~~~~g~CPgCr~~Y 47 (48)
T PF14570_consen 1 CPLCDEELDETDKDFYPCECGFQI-CRFCYHDILENEGGRCPGCREPY 47 (48)
T ss_dssp -TTTS-B--CCCTT--SSTTS-----HHHHHHHTTSS-SB-TTT--B-
T ss_pred CCCcccccccCCCccccCcCCCcH-HHHHHHHHHhccCCCCCCCCCCC
Confidence 56666653 333344 578888 9999999986 467999999875
No 162
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.72 E-value=0.0023 Score=37.50 Aligned_cols=27 Identities=44% Similarity=0.758 Sum_probs=12.9
Q ss_pred CChHHHHHHHhCCcHHHHHHHHHcCCCc
Q 010439 50 GKTPLIVACMDSGLINVAKTLIELGANI 77 (510)
Q Consensus 50 g~TpL~~A~~~~~~~~~v~~Ll~~ga~~ 77 (510)
|.||||+|+.. ++.++++.|+++|.++
T Consensus 2 ~~~~l~~~~~~-~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAEN-GNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHc-CCHHHHHHHHHcCCCC
Confidence 34455555444 4455555555444433
No 163
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.70 E-value=0.003 Score=36.97 Aligned_cols=27 Identities=52% Similarity=0.699 Sum_probs=15.9
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCC
Q 010439 86 GGTPLHHAAKRGLEPTVRLLLSCGANA 112 (510)
Q Consensus 86 g~TpLh~A~~~g~~~~v~~Ll~~gad~ 112 (510)
|.||||+|+..++.+++++|++++.++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 456666666666666666666655543
No 164
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=96.58 E-value=0.00088 Score=58.51 Aligned_cols=47 Identities=26% Similarity=0.467 Sum_probs=40.1
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccce
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
..|.||......+|...|||.| |..|+.+--+....|-+|.+.....
T Consensus 197 F~C~iCKkdy~spvvt~CGH~F-C~~Cai~~y~kg~~C~~Cgk~t~G~ 243 (259)
T COG5152 197 FLCGICKKDYESPVVTECGHSF-CSLCAIRKYQKGDECGVCGKATYGR 243 (259)
T ss_pred eeehhchhhccchhhhhcchhH-HHHHHHHHhccCCcceecchhhccc
Confidence 4899999999999999999999 9999877666566899998765543
No 165
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.46 E-value=0.0045 Score=61.99 Aligned_cols=62 Identities=29% Similarity=0.294 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCCcc------cCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHH
Q 010439 30 VDAIRALRSQGASLEW------MDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAA 94 (510)
Q Consensus 30 ~~~v~~Ll~~g~~~~~------~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~ 94 (510)
...|++|.+++.+.|. .+..--|+||||+.. |..++|.+||+.|+|+-+. |..|.||.+++.
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~q-g~~k~v~~~Leeg~Dp~~k--d~~Grtpy~ls~ 471 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQ-GARKCVKYFLEEGCDPSTK--DGAGRTPYSLSA 471 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhc-chHHHHHHHHHhcCCchhc--ccCCCCcccccc
Confidence 5678888888876643 234567999999997 9999999999999999999 999999999987
No 166
>TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1. All proteins in this family for which functions are known are cyclin dependent protein kinases that are components of TFIIH, a complex that is involved in nucleotide excision repair and transcription initiation. Also known as MAT1 (menage a trois 1). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=96.41 E-value=0.0026 Score=61.01 Aligned_cols=30 Identities=37% Similarity=0.972 Sum_probs=25.5
Q ss_pred CCCCccchHHhHHHHhcc-CCccccccccccc
Q 010439 473 PCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 503 (510)
Q Consensus 473 pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 503 (510)
+|||.| |..|+.+++.. ...||.|+.++..
T Consensus 25 ~CGH~~-C~sCv~~l~~~~~~~CP~C~~~lrk 55 (309)
T TIGR00570 25 VCGHTL-CESCVDLLFVRGSGSCPECDTPLRK 55 (309)
T ss_pred CCCCcc-cHHHHHHHhcCCCCCCCCCCCccch
Confidence 799999 99999998754 3489999998764
No 167
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.37 E-value=0.0012 Score=61.84 Aligned_cols=47 Identities=26% Similarity=0.531 Sum_probs=41.1
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccce
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
..|-||...+.++|...|+|.| |..|+..-.+...+|.+|.+.+...
T Consensus 242 f~c~icr~~f~~pVvt~c~h~f-c~~ca~~~~qk~~~c~vC~~~t~g~ 288 (313)
T KOG1813|consen 242 FKCFICRKYFYRPVVTKCGHYF-CEVCALKPYQKGEKCYVCSQQTHGS 288 (313)
T ss_pred ccccccccccccchhhcCCcee-ehhhhccccccCCcceecccccccc
Confidence 3699999999999999999999 9999887766667899999887654
No 168
>COG5175 MOT2 Transcriptional repressor [Transcription]
Probab=96.25 E-value=0.0024 Score=60.44 Aligned_cols=48 Identities=31% Similarity=0.841 Sum_probs=36.4
Q ss_pred cccccccccccc--cceEEe--CCCCccchHHhHHHHhcc-CCccccccccccc
Q 010439 455 SSSSCVICWEAP--VEGACV--PCGHMAGCMSCLSEIKAK-KGDCPVCRTKINQ 503 (510)
Q Consensus 455 ~~~~C~iC~~~~--~~~~~~--pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~~ 503 (510)
++..|+.|+|.. .+.-|. |||-.+ |..|...+++. +++||-||...++
T Consensus 13 eed~cplcie~mditdknf~pc~cgy~i-c~fc~~~irq~lngrcpacrr~y~d 65 (480)
T COG5175 13 EEDYCPLCIEPMDITDKNFFPCPCGYQI-CQFCYNNIRQNLNGRCPACRRKYDD 65 (480)
T ss_pred ccccCcccccccccccCCcccCCcccHH-HHHHHHHHHhhccCCChHhhhhccc
Confidence 345699999863 233344 688888 99999999874 6799999998764
No 169
>KOG1734 consensus Predicted RING-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=96.18 E-value=0.0019 Score=59.33 Aligned_cols=45 Identities=22% Similarity=0.536 Sum_probs=35.9
Q ss_pred ccccccccccc----------ceEEeCCCCccchHHhHHHHhccC--Ccccccccccc
Q 010439 457 SSCVICWEAPV----------EGACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~----------~~~~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 502 (510)
..|.||-...- +..-+.|+|.| .+.|+.-|.... ..||+|++.|+
T Consensus 225 ~vCaVCg~~~~~s~~eegvienty~LsCnHvF-HEfCIrGWcivGKkqtCPYCKekVd 281 (328)
T KOG1734|consen 225 SVCAVCGQQIDVSVDEEGVIENTYKLSCNHVF-HEFCIRGWCIVGKKQTCPYCKEKVD 281 (328)
T ss_pred chhHhhcchheeecchhhhhhhheeeecccch-HHHhhhhheeecCCCCCchHHHHhh
Confidence 68999976532 23467999999 999999998753 47999998875
No 170
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=96.07 E-value=0.0046 Score=64.93 Aligned_cols=52 Identities=21% Similarity=0.391 Sum_probs=41.7
Q ss_pred cccccccccccccceE---EeCCCCccchHHhHHHHhccCCccccccccccceeEe
Q 010439 455 SSSSCVICWEAPVEGA---CVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~---~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i 507 (510)
....|.+|+....+.. -.+|+|.| |..|+..|.+-...||+||..+.+++.+
T Consensus 122 ~~~~CP~Ci~s~~DqL~~~~k~c~H~F-C~~Ci~sWsR~aqTCPiDR~EF~~v~V~ 176 (1134)
T KOG0825|consen 122 VENQCPNCLKSCNDQLEESEKHTAHYF-CEECVGSWSRCAQTCPVDRGEFGEVKVL 176 (1134)
T ss_pred hhhhhhHHHHHHHHHhhcccccccccc-HHHHhhhhhhhcccCchhhhhhheeeee
Confidence 3468999997755443 34899999 9999999998777899999999877654
No 171
>PF07800 DUF1644: Protein of unknown function (DUF1644); InterPro: IPR012866 This family consists of sequences found in a number of hypothetical plant proteins of unknown function. The region of interest contains nine highly conserved cysteine residues and is approximately 160 amino acids in length, which probably represent a zinc-binding domain.
Probab=95.92 E-value=0.0078 Score=51.24 Aligned_cols=51 Identities=29% Similarity=0.701 Sum_probs=37.9
Q ss_pred cccccccccccceEEeCCC-Cccc-----------hHHhHHHHhcc-------------------------------CCc
Q 010439 457 SSCVICWEAPVEGACVPCG-HMAG-----------CMSCLSEIKAK-------------------------------KGD 493 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCg-H~~~-----------C~~C~~~~~~~-------------------------------~~~ 493 (510)
..|+||||-+=++|++-|. |.-. ..-|.++.++. +-.
T Consensus 3 ~~CpICme~PHNAVLLlCSS~~kgcRpymc~Ts~rhSNCLdqfkka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 82 (162)
T PF07800_consen 3 VTCPICMEHPHNAVLLLCSSHEKGCRPYMCDTSYRHSNCLDQFKKAYGKSSSSSSQSSSSAPSDSSSSESSESQEQPELA 82 (162)
T ss_pred ccCceeccCCCceEEEEeccccCCccccccCCccchhHHHHHHHHHhcCCCCccccccccCcCCCccccccccccccccc
Confidence 5899999999999999775 3322 35677776541 125
Q ss_pred cccccccccceeEe
Q 010439 494 CPVCRTKINQVIRL 507 (510)
Q Consensus 494 Cp~Cr~~i~~~~~i 507 (510)
||+||..|...+.+
T Consensus 83 CPLCRG~V~GWtvv 96 (162)
T PF07800_consen 83 CPLCRGEVKGWTVV 96 (162)
T ss_pred CccccCceeceEEc
Confidence 99999999987765
No 172
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.86 E-value=0.0073 Score=54.88 Aligned_cols=48 Identities=17% Similarity=0.344 Sum_probs=40.8
Q ss_pred cccccccccccccc----eEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 455 SSSSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 455 ~~~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
....|+||.+...+ +++.||||+| |++|++++......||+|..+..+
T Consensus 220 ~ryiCpvtrd~LtNt~~ca~Lr~sg~Vv-~~ecvEklir~D~v~pv~d~plkd 271 (303)
T KOG3039|consen 220 KRYICPVTRDTLTNTTPCAVLRPSGHVV-TKECVEKLIRKDMVDPVTDKPLKD 271 (303)
T ss_pred cceecccchhhhcCccceEEeccCCcEe-eHHHHHHhccccccccCCCCcCcc
Confidence 45799999997543 4577999999 999999999877789999998865
No 173
>smart00744 RINGv The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins. Some of these proteins have been shown both in vivo and in vitro to have ubiquitin E3 ligase activity. The RING-variant domain is reminiscent of both the RING and the PHD domains and may represent an evolutionary intermediate. To describe this domain the term PHD/LAP domain has been used in the past. Extended description: The RING-variant (RINGv) domain contains a C4HC3 zinc-finger-like motif similar to the PHD domain, while some of the spacing between the Cys/His residues follow a pattern somewhat closer to that found in the RING domain. The RINGv domain, similar to the RING, PHD and LIM domains, is thought to bind two zinc ions co-ordinated by the highly conserved Cys and His residues. RING variant domain: C-x (2) -C-x(10-45)-C-x (1) -C-x (7) -H-x(2)-C-x(11-25)-C-x(2)-C As opposed to a PHD: C-x(1-2) -C-x (7-13)-C-x(2-4)-C-x(4-5)-H-x(2)-C-x(10-21)-C-x(2)-C Class
Probab=95.86 E-value=0.0075 Score=41.38 Aligned_cols=40 Identities=23% Similarity=0.640 Sum_probs=31.8
Q ss_pred ccccccc--cccceEEeCCC-----CccchHHhHHHHhccC--Ccccccc
Q 010439 458 SCVICWE--APVEGACVPCG-----HMAGCMSCLSEIKAKK--GDCPVCR 498 (510)
Q Consensus 458 ~C~iC~~--~~~~~~~~pCg-----H~~~C~~C~~~~~~~~--~~Cp~Cr 498 (510)
.|.||++ ...+....||. |.+ ...|..+|...+ ..||+|+
T Consensus 1 ~CrIC~~~~~~~~~l~~PC~C~G~~~~v-H~~Cl~~W~~~~~~~~C~iC~ 49 (49)
T smart00744 1 ICRICHDEGDEGDPLVSPCRCKGSLKYV-HQECLERWINESGNKTCEICK 49 (49)
T ss_pred CccCCCCCCCCCCeeEeccccCCchhHH-HHHHHHHHHHHcCCCcCCCCC
Confidence 3889997 56677788996 566 999999998654 3899995
No 174
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=95.80 E-value=0.0038 Score=62.25 Aligned_cols=46 Identities=33% Similarity=0.664 Sum_probs=36.4
Q ss_pred cccccccccc-----------------ccceEEeCCCCccchHHhHHHHhcc-CCcccccccccc
Q 010439 456 SSSCVICWEA-----------------PVEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 502 (510)
Q Consensus 456 ~~~C~iC~~~-----------------~~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 502 (510)
...|+|||.. .++..+.||.|.| ...|..+|-.. +-.||.||.++.
T Consensus 571 t~dC~ICMt~I~l~~~~s~~~~~~~~~~~nYm~tPC~Hif-H~~CL~~WMd~ykl~CPvCR~pLP 634 (636)
T KOG0828|consen 571 TNDCVICMTPIDLRSTGSDCMVASMMVRRNYMLTPCHHIF-HRQCLLQWMDTYKLICPVCRCPLP 634 (636)
T ss_pred cccceEeccccceeeccCcchhhhhhhhccccccchHHHH-HHHHHHHHHhhhcccCCccCCCCC
Confidence 3589999953 2245567999999 99999999874 348999999874
No 175
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]
Probab=95.66 E-value=0.0078 Score=59.57 Aligned_cols=41 Identities=32% Similarity=0.650 Sum_probs=32.3
Q ss_pred cccccccccccc-e---EEeCCCCccchHHhHHHHhccCCcccccccc
Q 010439 457 SSCVICWEAPVE-G---ACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 457 ~~C~iC~~~~~~-~---~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
..|+||+|+.-. + +-+.|.|.| .-.|..+|+.. .||+||--
T Consensus 176 PTCpVCLERMD~s~~gi~t~~c~Hsf-h~~cl~~w~~~--scpvcR~~ 220 (493)
T KOG0804|consen 176 PTCPVCLERMDSSTTGILTILCNHSF-HCSCLMKWWDS--SCPVCRYC 220 (493)
T ss_pred CCcchhHhhcCccccceeeeeccccc-chHHHhhcccC--cChhhhhh
Confidence 489999998432 2 456899999 88999999864 59999853
No 176
>PF04641 Rtf2: Rtf2 RING-finger
Probab=95.40 E-value=0.015 Score=55.73 Aligned_cols=52 Identities=27% Similarity=0.454 Sum_probs=40.4
Q ss_pred Ccccccccccccc----cceEEeCCCCccchHHhHHHHhccCCccccccccccc--eeEe
Q 010439 454 GSSSSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ--VIRL 507 (510)
Q Consensus 454 ~~~~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~--~~~i 507 (510)
.....|+|....+ .-+++.||||+| ++.++..+. ....||+|..++.. +|.|
T Consensus 111 ~~~~~CPvt~~~~~~~~~fv~l~~cG~V~-s~~alke~k-~~~~Cp~c~~~f~~~DiI~L 168 (260)
T PF04641_consen 111 EGRFICPVTGKEFNGKHKFVYLRPCGCVF-SEKALKELK-KSKKCPVCGKPFTEEDIIPL 168 (260)
T ss_pred CceeECCCCCcccCCceeEEEEcCCCCEe-eHHHHHhhc-ccccccccCCccccCCEEEe
Confidence 3447999998664 456667999999 999999996 34579999999864 4544
No 177
>PF03854 zf-P11: P-11 zinc finger; InterPro: IPR003224 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The RING-finger is a specialised type of Zn-finger of 40 to 60 residues that binds two atoms of zinc, and is probably involved in mediating protein-protein interactions [, , ]. There are two different variants, the C3HC4-type and a C3H2C3-type, which is clearly related despite the different cysteine/histidine pattern. The latter type is sometimes referred to as 'RING-H2 finger'. The RING domain is a protein interaction domain which has been implicated in a range of diverse biological processes. Several 3D-structures for RING-fingers are known [, ]. The 3D structure of the zinc ligation system is unique to the RING domain and is referred to as the 'cross-brace' motif. The spacing of the cysteines in such a domain is: C-x(2)-C-x(9 to 39)-C-x(1 to 3)-H-x(2 to 3)-C-x(2)-C-x(4 to 48)-C-x(2)-C Metal ligand pairs one and three co-ordinate to bind one zinc ion, whilst pairs two and four bind the second. This entry represents RING finger protein Z, a small polypeptide found in some negative-strand RNA viruses including Lassa fever virus, which plays a crucial role in virion assembly and budding. RING finger Z has been shown to interact with several host proteins, including promyelocytic leukemia protein and the eukaryotic translation initiation factor 4E [, ]. It is sufficient in the absence of any other viral proteins to release virus-like particles from the infected cell []. This protein is also responsible for arenavirus superinfection exclusion; expression of this protein in a host cell strongly and specifically inhibits areanavirus transcription and replication []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003723 RNA binding, 0008270 zinc ion binding; PDB: 2KO5_A.
Probab=95.39 E-value=0.01 Score=39.19 Aligned_cols=46 Identities=30% Similarity=0.882 Sum_probs=26.5
Q ss_pred ccccccccccceEEeCCC-CccchHHhHHHHhccCCccccccccccceeE
Q 010439 458 SCVICWEAPVEGACVPCG-HMAGCMSCLSEIKAKKGDCPVCRTKINQVIR 506 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCg-H~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~ 506 (510)
.|--|+-..+. ++.|. |.. |..|...|...+..||+|..++...+|
T Consensus 4 nCKsCWf~~k~--Li~C~dHYL-Cl~CLt~ml~~s~~C~iC~~~LPtkir 50 (50)
T PF03854_consen 4 NCKSCWFANKG--LIKCSDHYL-CLNCLTLMLSRSDRCPICGKPLPTKIR 50 (50)
T ss_dssp ---SS-S--SS--EEE-SS-EE-EHHHHHHT-SSSSEETTTTEE----S-
T ss_pred cChhhhhcCCC--eeeecchhH-HHHHHHHHhccccCCCcccCcCccccC
Confidence 56777755554 45688 665 999999999988899999998876653
No 178
>KOG3002 consensus Zn finger protein [General function prediction only]
Probab=95.35 E-value=0.0085 Score=57.91 Aligned_cols=45 Identities=31% Similarity=0.813 Sum_probs=36.9
Q ss_pred CcccccccccccccceEEeCC--CCccchHHhHHHHhccCCccccccccccc
Q 010439 454 GSSSSCVICWEAPVEGACVPC--GHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pC--gH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
.+..+|+||.+....+++ .| ||.. |..|..++.. +||.||.++..
T Consensus 46 ~~lleCPvC~~~l~~Pi~-QC~nGHla-CssC~~~~~~---~CP~Cr~~~g~ 92 (299)
T KOG3002|consen 46 LDLLDCPVCFNPLSPPIF-QCDNGHLA-CSSCRTKVSN---KCPTCRLPIGN 92 (299)
T ss_pred hhhccCchhhccCcccce-ecCCCcEe-hhhhhhhhcc---cCCcccccccc
Confidence 344689999999888877 46 7999 9999876654 69999999874
No 179
>KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms]
Probab=95.08 E-value=0.0081 Score=60.95 Aligned_cols=49 Identities=33% Similarity=0.737 Sum_probs=42.8
Q ss_pred cccccccccccccceEE-eCCCCccchHHhHHHHhccCCccccccccccce
Q 010439 455 SSSSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
....|.+|+....+++. ..|||.| |..|+..+......||.|+..+...
T Consensus 20 ~~l~C~~C~~vl~~p~~~~~cgh~f-C~~C~~~~~~~~~~cp~~~~~~~~~ 69 (391)
T KOG0297|consen 20 ENLLCPICMSVLRDPVQTTTCGHRF-CAGCLLESLSNHQKCPVCRQELTQA 69 (391)
T ss_pred ccccCccccccccCCCCCCCCCCcc-cccccchhhccCcCCcccccccchh
Confidence 44789999999999998 4999999 9999999988777999998877643
No 180
>KOG2660 consensus Locus-specific chromosome binding proteins [Function unknown]
Probab=94.64 E-value=0.0087 Score=57.16 Aligned_cols=50 Identities=24% Similarity=0.603 Sum_probs=42.8
Q ss_pred cccccccccccceEEe-CCCCccchHHhHHHHhccCCccccccccccceeEe
Q 010439 457 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i 507 (510)
..|.+|-.-+.++..+ -|-|-| |..|+.+.......||.|...|-+...+
T Consensus 16 itC~LC~GYliDATTI~eCLHTF-CkSCivk~l~~~~~CP~C~i~ih~t~pl 66 (331)
T KOG2660|consen 16 ITCRLCGGYLIDATTITECLHTF-CKSCIVKYLEESKYCPTCDIVIHKTHPL 66 (331)
T ss_pred eehhhccceeecchhHHHHHHHH-HHHHHHHHHHHhccCCccceeccCcccc
Confidence 5899999998888766 499999 9999988887788999999988877644
No 181
>KOG0826 consensus Predicted E3 ubiquitin ligase involved in peroxisome organization [Posttranslational modification, protein turnover, chaperones]
Probab=94.61 E-value=0.017 Score=54.92 Aligned_cols=54 Identities=22% Similarity=0.576 Sum_probs=40.1
Q ss_pred cccccccccccccceEEe-CCCCccchHHhHHHHhccCCccccccccc--cceeEeee
Q 010439 455 SSSSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKKGDCPVCRTKI--NQVIRLYT 509 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i--~~~~~i~~ 509 (510)
+...|+||+....++..+ --|-+| |+.|+-.-....+.||+-..+. +..+|+|.
T Consensus 299 ~~~~CpvClk~r~Nptvl~vSGyVf-CY~Ci~~Yv~~~~~CPVT~~p~~v~~l~rl~~ 355 (357)
T KOG0826|consen 299 DREVCPVCLKKRQNPTVLEVSGYVF-CYPCIFSYVVNYGHCPVTGYPASVDHLIRLFN 355 (357)
T ss_pred ccccChhHHhccCCCceEEecceEE-eHHHHHHHHHhcCCCCccCCcchHHHHHHHhc
Confidence 446899999987765544 458888 9999988877777999865444 56666663
No 182
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.60 E-value=0.28 Score=44.68 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=23.1
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHc
Q 010439 21 LYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL 73 (510)
Q Consensus 21 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ 73 (510)
|--|+..-+++.+..++... ++-.++|-+|+.+ +..+++.+|+..
T Consensus 157 ledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~-~K~dva~~lls~ 201 (284)
T PF06128_consen 157 LEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGN-AKEDVALYLLSK 201 (284)
T ss_pred HHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcc-cHHHHHHHHHhh
Confidence 34455555555544443321 1235666666654 556666666643
No 183
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=94.57 E-value=0.3 Score=43.16 Aligned_cols=138 Identities=17% Similarity=0.103 Sum_probs=93.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCC
Q 010439 19 ELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGL 98 (510)
Q Consensus 19 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~ 98 (510)
=.|..|+..+.+.+++.+-+...+- -...++-.-.||+. .+.|+|+++ |-++... +-.+-+-.|.....
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~-qkydiV~WI---~qnL~i~----~~~~iFdIA~~~kD 116 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEE-QKYDIVKWI---GQNLHIY----NPEDIFDIAFAKKD 116 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHH-ccccHHHHH---hhccCCC----Cchhhhhhhhhccc
Confidence 4567788999999988876643211 13467788889987 889999998 3333332 23456677887777
Q ss_pred HHHH----HHHHHCCCCCccCCCC--CCcHHHHHHHcCCHHHHHHHHhccccccccccccCCCCHHHHHhhhcCCHHHHH
Q 010439 99 EPTV----RLLLSCGANALVRNDD--CHTALGVARIKGHINVVRAIESHICYFCGWLREFYGPSFLEALAPQLMSRKIWV 172 (510)
Q Consensus 99 ~~~v----~~Ll~~gad~~~~d~~--g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~~g~t~L~~~A~~~~~~~~~~ 172 (510)
.+.. .+++++...-...|.. -.--|..|+.+|....|...+++|.+++ .++|- .|+.+++.+|+.
T Consensus 117 lsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~--------~~vls-~Av~ynhRkIL~ 187 (192)
T PF03158_consen 117 LSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVD--------IIVLS-QAVKYNHRKILD 187 (192)
T ss_pred hhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCccc--------HHHHH-HHHHhhHHHHHH
Confidence 6652 2233332211011110 0124678999999999999999998876 28888 999999999999
Q ss_pred HHhh
Q 010439 173 VVIP 176 (510)
Q Consensus 173 ~Ll~ 176 (510)
+++.
T Consensus 188 yfi~ 191 (192)
T PF03158_consen 188 YFIR 191 (192)
T ss_pred Hhhc
Confidence 8874
No 184
>COG5194 APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning]
Probab=94.17 E-value=0.046 Score=40.56 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=28.4
Q ss_pred eEEeCCCCccchHHhHHHHhccCCcccccccccc
Q 010439 469 GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 469 ~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
++---|.|.| ...|+.+|...++.||++|++..
T Consensus 49 v~wG~CnHaF-H~HCI~rWL~Tk~~CPld~q~w~ 81 (88)
T COG5194 49 VVWGVCNHAF-HDHCIYRWLDTKGVCPLDRQTWV 81 (88)
T ss_pred EEEEecchHH-HHHHHHHHHhhCCCCCCCCceeE
Confidence 4444799999 99999999999899999998753
No 185
>KOG1002 consensus Nucleotide excision repair protein RAD16 [Replication, recombination and repair]
Probab=94.12 E-value=0.019 Score=57.81 Aligned_cols=50 Identities=22% Similarity=0.606 Sum_probs=40.0
Q ss_pred CCCcccccccccccccceEEeCCCCccchHHhHHHHhcc-----CCcccccccccc
Q 010439 452 DDGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK-----KGDCPVCRTKIN 502 (510)
Q Consensus 452 ~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~-----~~~Cp~Cr~~i~ 502 (510)
+..++.+|.+|.|...+.+...|.|.| |..|+...... +-.||.|.....
T Consensus 532 enk~~~~C~lc~d~aed~i~s~ChH~F-CrlCi~eyv~~f~~~~nvtCP~C~i~Ls 586 (791)
T KOG1002|consen 532 ENKGEVECGLCHDPAEDYIESSCHHKF-CRLCIKEYVESFMENNNVTCPVCHIGLS 586 (791)
T ss_pred cccCceeecccCChhhhhHhhhhhHHH-HHHHHHHHHHhhhcccCCCCcccccccc
Confidence 344557999999999999999999999 99999666542 247999976553
No 186
>KOG1001 consensus Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily [Transcription; Replication, recombination and repair]
Probab=94.06 E-value=0.022 Score=61.48 Aligned_cols=44 Identities=30% Similarity=0.715 Sum_probs=37.7
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccC--Ccccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 502 (510)
..|.+|++ ...++..+|||.+ |.+|........ ..||+||..+.
T Consensus 455 ~~c~ic~~-~~~~~it~c~h~~-c~~c~~~~i~~~~~~~~~~cr~~l~ 500 (674)
T KOG1001|consen 455 HWCHICCD-LDSFFITRCGHDF-CVECLKKSIQQSENAPCPLCRNVLK 500 (674)
T ss_pred cccccccc-cccceeecccchH-HHHHHHhccccccCCCCcHHHHHHH
Confidence 68999999 8888899999999 999998877653 37999998775
No 187
>KOG1814 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=93.76 E-value=0.034 Score=54.68 Aligned_cols=31 Identities=35% Similarity=0.829 Sum_probs=25.7
Q ss_pred ccccccccccc---ceEEeCCCCccchHHhHHHHh
Q 010439 457 SSCVICWEAPV---EGACVPCGHMAGCMSCLSEIK 488 (510)
Q Consensus 457 ~~C~iC~~~~~---~~~~~pCgH~~~C~~C~~~~~ 488 (510)
..|.||++... ..+++||+|+| |..|....-
T Consensus 185 f~C~ICf~e~~G~~c~~~lpC~Hv~-Ck~C~kdY~ 218 (445)
T KOG1814|consen 185 FDCCICFEEQMGQHCFKFLPCSHVF-CKSCLKDYF 218 (445)
T ss_pred ccceeeehhhcCcceeeecccchHH-HHHHHHHHH
Confidence 57999999854 47788999999 999986553
No 188
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.67 E-value=0.24 Score=45.07 Aligned_cols=95 Identities=11% Similarity=0.054 Sum_probs=68.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCCCccCC----CCCCcHHHHHHH--cCCHHHHHHHHhcc-ccccc-cccccCCCC
Q 010439 85 RGGTPLHHAAKRGLEPTVRLLLSCGANALVRN----DDCHTALGVARI--KGHINVVRAIESHI-CYFCG-WLREFYGPS 156 (510)
Q Consensus 85 ~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d----~~g~TpL~~A~~--~g~~~~v~~Ll~~g-a~~~~-~~~d~~g~t 156 (510)
.-.++|-++..++..+++.+||.. -+...+| ..+.--+.|+.. .....++++.+++| +++|. -.+-..|.|
T Consensus 178 dA~~Am~~si~~~K~dva~~lls~-f~ft~~dv~~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdt 256 (284)
T PF06128_consen 178 DAHQAMWLSIGNAKEDVALYLLSK-FNFTKQDVASMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDT 256 (284)
T ss_pred HHHHHHHHHhcccHHHHHHHHHhh-cceecchhhhcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcch
Confidence 346899999999999999999975 1111222 122223444443 34578999999999 56663 134567999
Q ss_pred HHHHHhhhcCCHHHHHHHhhCCCCC
Q 010439 157 FLEALAPQLMSRKIWVVVIPCGTAN 181 (510)
Q Consensus 157 ~L~~~A~~~~~~~~~~~Ll~~ga~~ 181 (510)
-|. -|.++++.+++.+||++||-.
T Consensus 257 MLD-NA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 257 MLD-NAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred HHH-hHHhcCcHHHHHHHHHcCccc
Confidence 999 899999999999999999843
No 189
>PF11793 FANCL_C: FANCL C-terminal domain; PDB: 3K1L_A.
Probab=93.60 E-value=0.017 Score=43.04 Aligned_cols=45 Identities=33% Similarity=0.778 Sum_probs=21.7
Q ss_pred ccccccccccc------ceEEe--CCCCccchHHhHHHHhcc-----------CCcccccccccc
Q 010439 457 SSCVICWEAPV------EGACV--PCGHMAGCMSCLSEIKAK-----------KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~------~~~~~--pCgH~~~C~~C~~~~~~~-----------~~~Cp~Cr~~i~ 502 (510)
..|.||++..- +.+.- .|++.| ...|...|-.. .+.||.|+++|.
T Consensus 3 ~~C~IC~~~~~~~~~~p~~~C~n~~C~~~f-H~~CL~~wf~~~~~~~~~~~~~~G~CP~C~~~i~ 66 (70)
T PF11793_consen 3 LECGICYSYRLDDGEIPDVVCPNPSCGKKF-HLLCLSEWFLSLEKSRQSFIPIFGECPYCSSPIS 66 (70)
T ss_dssp -S-SSS--SS-TT-----B--S-TT----B--SGGGHHHHHHHHSSS-TTT--EEE-TTT-SEEE
T ss_pred CCCCcCCcEecCCCCcCceEcCCcccCCHH-HHHHHHHHHHHcccCCeeecccccCCcCCCCeee
Confidence 58999997632 23332 688888 99999888542 136999999885
No 190
>PF11789 zf-Nse: Zinc-finger of the MIZ type in Nse subunit; PDB: 2YU4_A 3HTK_C.
Probab=93.59 E-value=0.072 Score=37.79 Aligned_cols=39 Identities=21% Similarity=0.387 Sum_probs=28.8
Q ss_pred cccccccccccceEEe-CCCCccchHHhHHHHhccC--Ccccc
Q 010439 457 SSCVICWEAPVEGACV-PCGHMAGCMSCLSEIKAKK--GDCPV 496 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~-pCgH~~~C~~C~~~~~~~~--~~Cp~ 496 (510)
..|+|.+..+.++|.- .|||.| ..+.+..+...+ .+||+
T Consensus 12 ~~CPiT~~~~~~PV~s~~C~H~f-ek~aI~~~i~~~~~~~CPv 53 (57)
T PF11789_consen 12 LKCPITLQPFEDPVKSKKCGHTF-EKEAILQYIQRNGSKRCPV 53 (57)
T ss_dssp SB-TTTSSB-SSEEEESSS--EE-EHHHHHHHCTTTS-EE-SC
T ss_pred cCCCCcCChhhCCcCcCCCCCee-cHHHHHHHHHhcCCCCCCC
Confidence 6899999999999875 899999 999999998433 37998
No 191
>KOG3579 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=93.34 E-value=0.17 Score=47.29 Aligned_cols=32 Identities=28% Similarity=0.617 Sum_probs=27.6
Q ss_pred cccccccccccceEEeCCC----CccchHHhHHHHhc
Q 010439 457 SSCVICWEAPVEGACVPCG----HMAGCMSCLSEIKA 489 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCg----H~~~C~~C~~~~~~ 489 (510)
..|.+|.|+..+.-|+.|- |.| |+.|...-.+
T Consensus 269 LcCTLC~ERLEDTHFVQCPSVp~HKF-CFPCSResIK 304 (352)
T KOG3579|consen 269 LCCTLCHERLEDTHFVQCPSVPSHKF-CFPCSRESIK 304 (352)
T ss_pred eeehhhhhhhccCceeecCCCcccce-ecccCHHHHH
Confidence 6899999999999999995 999 9999865443
No 192
>COG5219 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=93.24 E-value=0.038 Score=59.56 Aligned_cols=48 Identities=27% Similarity=0.720 Sum_probs=36.9
Q ss_pred Cccccccccccc-------ccceEEeCCCCccchHHhHHHHhccCC--cccccccccc
Q 010439 454 GSSSSCVICWEA-------PVEGACVPCGHMAGCMSCLSEIKAKKG--DCPVCRTKIN 502 (510)
Q Consensus 454 ~~~~~C~iC~~~-------~~~~~~~pCgH~~~C~~C~~~~~~~~~--~Cp~Cr~~i~ 502 (510)
+...+|.||+.. .....+-.|.|.| ...|.-+|-+.++ .||+||..|+
T Consensus 1467 sG~eECaICYsvL~~vdr~lPskrC~TCknKF-H~~CLyKWf~Ss~~s~CPlCRseit 1523 (1525)
T COG5219 1467 SGHEECAICYSVLDMVDRSLPSKRCATCKNKF-HTRCLYKWFASSARSNCPLCRSEIT 1523 (1525)
T ss_pred CCcchhhHHHHHHHHHhccCCccccchhhhhh-hHHHHHHHHHhcCCCCCCccccccc
Confidence 344689999954 3344455799999 9999999987643 7999998775
No 193
>PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0.
Probab=92.60 E-value=0.07 Score=44.05 Aligned_cols=47 Identities=30% Similarity=0.648 Sum_probs=38.8
Q ss_pred cccccccccccceEEe----CCCCccchHHhHHHHhcc---CCccccccccccce
Q 010439 457 SSCVICWEAPVEGACV----PCGHMAGCMSCLSEIKAK---KGDCPVCRTKINQV 504 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~----pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i~~~ 504 (510)
.+|-||.|...+.-|+ =||-.+ |..|-..+|+. -+.||+|+..+.+.
T Consensus 81 YeCnIC~etS~ee~FLKPneCCgY~i-Cn~Cya~LWK~~~~ypvCPvCkTSFKss 134 (140)
T PF05290_consen 81 YECNICKETSAEERFLKPNECCGYSI-CNACYANLWKFCNLYPVCPVCKTSFKSS 134 (140)
T ss_pred eeccCcccccchhhcCCcccccchHH-HHHHHHHHHHHcccCCCCCccccccccc
Confidence 7999999998888877 388888 99998888864 35899999988653
No 194
>KOG2932 consensus E3 ubiquitin ligase involved in ubiquitination of E-cadherin complex [Posttranslational modification, protein turnover, chaperones]
Probab=92.52 E-value=0.027 Score=53.03 Aligned_cols=43 Identities=28% Similarity=0.863 Sum_probs=28.9
Q ss_pred ccccccccccc--ceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 457 SSCVICWEAPV--EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~~--~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
-.|.-| |.+. -...+||.|+| |.+|+..-. -+.||.|-..|-+
T Consensus 91 HfCd~C-d~PI~IYGRmIPCkHvF-Cl~CAr~~~--dK~Cp~C~d~Vqr 135 (389)
T KOG2932|consen 91 HFCDRC-DFPIAIYGRMIPCKHVF-CLECARSDS--DKICPLCDDRVQR 135 (389)
T ss_pred Eeeccc-CCcceeeecccccchhh-hhhhhhcCc--cccCcCcccHHHH
Confidence 356656 3332 22367999999 999986644 2469999776654
No 195
>KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms]
Probab=92.02 E-value=0.089 Score=59.19 Aligned_cols=49 Identities=24% Similarity=0.757 Sum_probs=37.9
Q ss_pred Cccccccccccc---ccceEEeCCCCccchHHhHHHHhccCC----------ccccccccccc
Q 010439 454 GSSSSCVICWEA---PVEGACVPCGHMAGCMSCLSEIKAKKG----------DCPVCRTKINQ 503 (510)
Q Consensus 454 ~~~~~C~iC~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~~----------~Cp~Cr~~i~~ 503 (510)
+.+..|+||+.. ..-.+.+.|+|+| ...|..++....+ .||+|..+|..
T Consensus 3484 D~DDmCmICFTE~L~AAP~IqL~C~HiF-HlqC~R~vLE~RW~GPRItF~FisCPiC~n~InH 3545 (3738)
T KOG1428|consen 3484 DADDMCMICFTEALSAAPAIQLDCSHIF-HLQCCRRVLENRWLGPRITFGFISCPICKNKINH 3545 (3738)
T ss_pred ccCceEEEEehhhhCCCcceecCCccch-hHHHHHHHHHhcccCCeeEEeeeecccccchhhh
Confidence 344699999976 3455678999999 9999988876432 49999999864
No 196
>COG5220 TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair]
Probab=91.65 E-value=0.076 Score=48.19 Aligned_cols=43 Identities=28% Similarity=0.700 Sum_probs=32.5
Q ss_pred cccccccccc---ccceEEe--C-CCCccchHHhHHHHhccCC-ccc--cccc
Q 010439 456 SSSCVICWEA---PVEGACV--P-CGHMAGCMSCLSEIKAKKG-DCP--VCRT 499 (510)
Q Consensus 456 ~~~C~iC~~~---~~~~~~~--p-CgH~~~C~~C~~~~~~~~~-~Cp--~Cr~ 499 (510)
+..|+||... ..++.++ | |-|.. |..|..++-...+ .|| -|..
T Consensus 10 d~~CPvCksDrYLnPdik~linPECyHrm-CESCvdRIFs~GpAqCP~~gC~k 61 (314)
T COG5220 10 DRRCPVCKSDRYLNPDIKILINPECYHRM-CESCVDRIFSRGPAQCPYKGCGK 61 (314)
T ss_pred cccCCccccccccCCCeEEEECHHHHHHH-HHHHHHHHhcCCCCCCCCccHHH
Confidence 3589999854 2445544 6 99999 9999999987644 899 6754
No 197
>PF05883 Baculo_RING: Baculovirus U-box/Ring-like domain; InterPro: IPR008573 This family consists of several Baculovirus proteins of around 130 residues in length. The function of this family is unknown, but it appears to be related to the U-box and ring finger domain by profile-profile comparison.
Probab=91.13 E-value=0.12 Score=43.06 Aligned_cols=32 Identities=25% Similarity=0.516 Sum_probs=26.6
Q ss_pred ccccccccccc---ceEEeCCC------CccchHHhHHHHhc
Q 010439 457 SSCVICWEAPV---EGACVPCG------HMAGCMSCLSEIKA 489 (510)
Q Consensus 457 ~~C~iC~~~~~---~~~~~pCg------H~~~C~~C~~~~~~ 489 (510)
.+|.||+++.- -+|.++|| |+| |..|..+|.+
T Consensus 27 ~EC~IC~~~I~~~~GvV~vt~~g~lnLEkmf-c~~C~~rw~~ 67 (134)
T PF05883_consen 27 VECQICFDRIDNNDGVVYVTDGGTLNLEKMF-CADCDKRWRR 67 (134)
T ss_pred eeehhhhhhhhcCCCEEEEecCCeehHHHHH-HHHHHHHHHh
Confidence 58999999854 47788998 777 9999999953
No 198
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=89.74 E-value=0.27 Score=46.63 Aligned_cols=50 Identities=8% Similarity=-0.074 Sum_probs=41.0
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccCCccccccccccceeEe
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i 507 (510)
..+|.+|-+.....+..||+|..+|.+|+.. .....||.|..-+-..++|
T Consensus 343 ~~~~~~~~~~~~st~~~~~~~n~~~~~~a~~--s~~~~~~~c~~~~~~~~~i 392 (394)
T KOG2113|consen 343 SLKGTSAGFGLLSTIWSGGNMNLSPGSLASA--SASPTSSTCDHNDHTLVPI 392 (394)
T ss_pred hcccccccCceeeeEeecCCcccChhhhhhc--ccCCccccccccceeeeec
Confidence 3689999999999999999999999999982 3346899997766555555
No 199
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.97 E-value=0.98 Score=34.15 Aligned_cols=48 Identities=21% Similarity=0.142 Sum_probs=31.8
Q ss_pred hHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHc
Q 010439 18 DELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIEL 73 (510)
Q Consensus 18 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ 73 (510)
...|..|+..|+.++++.+++.+ .++ ...|..|+.. .+-+++++|++.
T Consensus 7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~-H~n~i~~~l~~~ 54 (76)
T PF11929_consen 7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKS-HNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHH-hhHHHHHHHHHh
Confidence 45667777777777777777654 221 4457777775 777777777765
No 200
>KOG2930 consensus SCF ubiquitin ligase, Rbx1 component [Posttranslational modification, protein turnover, chaperones]
Probab=88.94 E-value=0.27 Score=38.57 Aligned_cols=31 Identities=23% Similarity=0.433 Sum_probs=26.6
Q ss_pred eEEeCCCCccchHHhHHHHhccCCcccccccc
Q 010439 469 GACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 469 ~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
++---|.|.| .+.|+.+|.+++..||+|.+.
T Consensus 76 VaWG~CNHaF-H~hCisrWlktr~vCPLdn~e 106 (114)
T KOG2930|consen 76 VAWGVCNHAF-HFHCISRWLKTRNVCPLDNKE 106 (114)
T ss_pred EEeeecchHH-HHHHHHHHHhhcCcCCCcCcc
Confidence 4444799999 999999999998999999764
No 201
>PF10272 Tmpp129: Putative transmembrane protein precursor; InterPro: IPR018801 This entry consists of proteins conserved from worms to humans. They are purported to be transmembrane protein-precursors but their function is unknown.
Probab=88.75 E-value=0.47 Score=47.02 Aligned_cols=28 Identities=39% Similarity=0.898 Sum_probs=20.6
Q ss_pred CCCccchHHhHHHHhc-------------cCCcccccccccc
Q 010439 474 CGHMAGCMSCLSEIKA-------------KKGDCPVCRTKIN 502 (510)
Q Consensus 474 CgH~~~C~~C~~~~~~-------------~~~~Cp~Cr~~i~ 502 (510)
|+-+. |.+|..+|-. ++..||.||++++
T Consensus 311 CRPmW-C~~Cm~kwFasrQd~~~~~~Wl~~~~~CPtCRa~FC 351 (358)
T PF10272_consen 311 CRPMW-CLECMGKWFASRQDQQHPETWLSGKCPCPTCRAKFC 351 (358)
T ss_pred ccchH-HHHHHHHHhhhcCCCCChhhhhcCCCCCCCCcccce
Confidence 44555 9999988853 2336999999876
No 202
>PHA02825 LAP/PHD finger-like protein; Provisional
Probab=87.59 E-value=0.52 Score=40.52 Aligned_cols=47 Identities=21% Similarity=0.383 Sum_probs=35.0
Q ss_pred cccccccccccccceEEeCCCC----ccchHHhHHHHhccCC--cccccccccc
Q 010439 455 SSSSCVICWEAPVEGACVPCGH----MAGCMSCLSEIKAKKG--DCPVCRTKIN 502 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~~~~pCgH----~~~C~~C~~~~~~~~~--~Cp~Cr~~i~ 502 (510)
.+..|-||++.... ...||.. .++..+|..+|...++ .|++|+.+..
T Consensus 7 ~~~~CRIC~~~~~~-~~~PC~CkGs~k~VH~sCL~rWi~~s~~~~CeiC~~~Y~ 59 (162)
T PHA02825 7 MDKCCWICKDEYDV-VTNYCNCKNENKIVHKECLEEWINTSKNKSCKICNGPYN 59 (162)
T ss_pred CCCeeEecCCCCCC-ccCCcccCCCchHHHHHHHHHHHhcCCCCcccccCCeEE
Confidence 34689999988653 3458774 2348999999987653 7999998774
No 203
>KOG1493 consensus Anaphase-promoting complex (APC), subunit 11 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=87.58 E-value=0.18 Score=37.14 Aligned_cols=28 Identities=29% Similarity=0.694 Sum_probs=23.5
Q ss_pred CCCCccchHHhHHHHhcc---CCccccccccc
Q 010439 473 PCGHMAGCMSCLSEIKAK---KGDCPVCRTKI 501 (510)
Q Consensus 473 pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i 501 (510)
-|.|.| -..|+.+|... +..||+||+..
T Consensus 50 ~C~h~f-h~hCI~~wl~~~tsq~~CPmcRq~~ 80 (84)
T KOG1493|consen 50 YCLHAF-HAHCILKWLNTPTSQGQCPMCRQTW 80 (84)
T ss_pred HHHHHH-HHHHHHHHhcCccccccCCcchhee
Confidence 699999 99999999764 35799999864
No 204
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=87.41 E-value=3.3 Score=36.74 Aligned_cols=113 Identities=19% Similarity=0.128 Sum_probs=75.2
Q ss_pred CchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhCCcHHHH----HHHHHcCCCccccCCCCCCChHHH
Q 010439 16 SKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDSGLINVA----KTLIELGANINAYRPGGRGGTPLH 91 (510)
Q Consensus 16 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v----~~Ll~~ga~~n~~~~d~~g~TpLh 91 (510)
..++.+-.||+..+.++|+++=+ ++... +-.+-.-+|..+ .+.++. .++.++...-...|++.--.--|.
T Consensus 75 ~~q~LFElAC~~qkydiV~WI~q---nL~i~--~~~~iFdIA~~~-kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~ 148 (192)
T PF03158_consen 75 LNQELFELACEEQKYDIVKWIGQ---NLHIY--NPEDIFDIAFAK-KDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLE 148 (192)
T ss_pred HHHHHHHHHHHHccccHHHHHhh---ccCCC--Cchhhhhhhhhc-cchhHHHHHHHHHHhhcccccccCHHHHHHHHHH
Confidence 45688899999999999999933 33222 223445566665 655542 223333211111111111124578
Q ss_pred HHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 010439 92 HAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIES 140 (510)
Q Consensus 92 ~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~ 140 (510)
+|+..|-...+.-.|++|.+++. +.|..|+..+|..++.+++.
T Consensus 149 ~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 149 KAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 89999999999999999988653 79999999999999998864
No 205
>PHA02862 5L protein; Provisional
Probab=87.26 E-value=0.5 Score=39.70 Aligned_cols=45 Identities=27% Similarity=0.498 Sum_probs=34.7
Q ss_pred cccccccccccceEEeCCCC----ccchHHhHHHHhccC--Ccccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGH----MAGCMSCLSEIKAKK--GDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH----~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 502 (510)
..|-||++...+. .-||.. .++..+|..+|...+ ..|++|+.+..
T Consensus 3 diCWIC~~~~~e~-~~PC~C~GS~K~VHq~CL~~WIn~S~k~~CeLCkteY~ 53 (156)
T PHA02862 3 DICWICNDVCDER-NNFCGCNEEYKVVHIKCMQLWINYSKKKECNLCKTKYN 53 (156)
T ss_pred CEEEEecCcCCCC-cccccccCcchhHHHHHHHHHHhcCCCcCccCCCCeEE
Confidence 5899999986544 468874 445899999998754 37999998774
No 206
>KOG2817 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=86.86 E-value=0.41 Score=47.25 Aligned_cols=40 Identities=23% Similarity=0.518 Sum_probs=30.3
Q ss_pred eEEeCCCCccchHHhHHHHhccC---Cccccccccc--cceeEeee
Q 010439 469 GACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKI--NQVIRLYT 509 (510)
Q Consensus 469 ~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i--~~~~~i~~ 509 (510)
++-+.|||++ |.+-+.++.+.. -+||+|-... ....|||+
T Consensus 350 Pm~L~CGHVI-SkdAlnrLS~ng~~sfKCPYCP~e~~~~~~kql~F 394 (394)
T KOG2817|consen 350 PMMLICGHVI-SKDALNRLSKNGSQSFKCPYCPVEQLASDTKQLYF 394 (394)
T ss_pred Ceeeecccee-cHHHHHHHhhCCCeeeeCCCCCcccCHHhcccccC
Confidence 5567899999 999999998753 3799996554 34666653
No 207
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=86.29 E-value=0.22 Score=49.11 Aligned_cols=54 Identities=28% Similarity=0.615 Sum_probs=0.0
Q ss_pred ccccccccccc-------------------ccceEEeCCCCccchHHhHHHHhcc---------CCccccccccccc---
Q 010439 455 SSSSCVICWEA-------------------PVEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKINQ--- 503 (510)
Q Consensus 455 ~~~~C~iC~~~-------------------~~~~~~~pCgH~~~C~~C~~~~~~~---------~~~Cp~Cr~~i~~--- 503 (510)
....|++|+.. +...+|.||||++ =+..+.-|.+. ...||.|-.++..
T Consensus 327 ~~r~CPlCr~~g~~V~L~mG~E~afyvD~~~pthaF~PCGHv~-SekTa~yWs~i~lPhGt~~f~a~CPFCa~~L~g~~g 405 (416)
T PF04710_consen 327 RSRTCPLCRQVGPYVPLWMGCEPAFYVDSGPPTHAFNPCGHVC-SEKTAKYWSQIPLPHGTHAFHAACPFCATPLDGEQG 405 (416)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCccccCCceeEeeccccceeecCCCCceeeccccccc-chhhhhhhhcCCCCCCcccccccCCcccCcccCCCC
Confidence 35799999852 3466788999997 66677777652 1359999999874
Q ss_pred eeEeee
Q 010439 504 VIRLYT 509 (510)
Q Consensus 504 ~~~i~~ 509 (510)
++|+++
T Consensus 406 ~vrLiF 411 (416)
T PF04710_consen 406 YVRLIF 411 (416)
T ss_dssp ------
T ss_pred ceEEEE
Confidence 677654
No 208
>COG5222 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=86.19 E-value=0.38 Score=45.22 Aligned_cols=42 Identities=26% Similarity=0.638 Sum_probs=33.6
Q ss_pred cccccccccccceEEeC-CCCccchHHhHHHHhc-cCCccccccc
Q 010439 457 SSCVICWEAPVEGACVP-CGHMAGCMSCLSEIKA-KKGDCPVCRT 499 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~p-CgH~~~C~~C~~~~~~-~~~~Cp~Cr~ 499 (510)
..|+.|....++++-.| |+|.| |.+|+..... ...+||.|..
T Consensus 275 LkCplc~~Llrnp~kT~cC~~~f-c~eci~~al~dsDf~CpnC~r 318 (427)
T COG5222 275 LKCPLCHCLLRNPMKTPCCGHTF-CDECIGTALLDSDFKCPNCSR 318 (427)
T ss_pred ccCcchhhhhhCcccCccccchH-HHHHHhhhhhhccccCCCccc
Confidence 58999999888888775 78999 9999975543 3458999965
No 209
>PF10367 Vps39_2: Vacuolar sorting protein 39 domain 2; InterPro: IPR019453 This entry represents a domain found in the vacuolar sorting protein Vps39 and transforming growth factor beta receptor-associated protein Trap1. Vps39, a component of the C-Vps complex, is thought to be required for the fusion of endosomes and other types of transport intermediates with the vacuole [, ]. In Saccharomyces cerevisiae (Baker's yeast), Vps39 has been shown to stimulate nucleotide exchange []. Trap1 plays a role in the TGF-beta/activin signaling pathway. It associates with inactive heteromeric TGF-beta and activin receptor complexes, mainly through the type II receptor, and is released upon activation of signaling [, ]. The precise function of this domain has not been characterised In Vps39 this domain is involved in localisation and in mediating the interactions with Vps11 [].
Probab=86.04 E-value=0.29 Score=39.85 Aligned_cols=31 Identities=29% Similarity=0.768 Sum_probs=23.4
Q ss_pred cccccccccccccce--EEeCCCCccchHHhHHH
Q 010439 455 SSSSCVICWEAPVEG--ACVPCGHMAGCMSCLSE 486 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~--~~~pCgH~~~C~~C~~~ 486 (510)
+...|.||....... +..||||.+ +..|+.|
T Consensus 77 ~~~~C~vC~k~l~~~~f~~~p~~~v~-H~~C~~r 109 (109)
T PF10367_consen 77 ESTKCSVCGKPLGNSVFVVFPCGHVV-HYSCIKR 109 (109)
T ss_pred CCCCccCcCCcCCCceEEEeCCCeEE-ecccccC
Confidence 346899999886543 455999999 9999753
No 210
>PHA03096 p28-like protein; Provisional
Probab=85.70 E-value=0.46 Score=45.75 Aligned_cols=44 Identities=20% Similarity=0.220 Sum_probs=31.1
Q ss_pred cccccccccc--------cceEEeCCCCccchHHhHHHHhccC------Cccccccccc
Q 010439 457 SSCVICWEAP--------VEGACVPCGHMAGCMSCLSEIKAKK------GDCPVCRTKI 501 (510)
Q Consensus 457 ~~C~iC~~~~--------~~~~~~pCgH~~~C~~C~~~~~~~~------~~Cp~Cr~~i 501 (510)
..|.|||+.. ....+-.|-|.| |..|+..|...+ +.||.|+..+
T Consensus 179 k~c~ic~e~~~~k~~~~~~fgil~~c~h~f-c~~ci~~wr~~~~~~e~~~~c~~~~~~~ 236 (284)
T PHA03096 179 KICGICLENIKAKYIIKKYYGILSEIKHEF-NIFCIKIWMTESLYKETEPENRRLNTVI 236 (284)
T ss_pred hhcccchhhhhhhccccccccccccCCcHH-HHHHHHHHHHhhhhcccCccccchhhHH
Confidence 4799999863 234455899999 999999887642 2455555544
No 211
>KOG3161 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=82.24 E-value=0.62 Score=48.60 Aligned_cols=36 Identities=31% Similarity=0.781 Sum_probs=29.4
Q ss_pred ccccccccc----ccceEEeCCCCccchHHhHHHHhccCCccc
Q 010439 457 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKKGDCP 495 (510)
Q Consensus 457 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp 495 (510)
..|.||+.. ...+|++-|||.+ |..|+..+... .||
T Consensus 12 l~c~ic~n~f~~~~~~Pvsl~cghti-c~~c~~~lyn~--scp 51 (861)
T KOG3161|consen 12 LLCDICLNLFVVQRLEPVSLQCGHTI-CGHCVQLLYNA--SCP 51 (861)
T ss_pred hhchHHHHHHHHHhcCcccccccchH-HHHHHHhHhhc--cCC
Confidence 589999755 3568888999999 99999998764 477
No 212
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=81.25 E-value=2.7 Score=31.69 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=23.6
Q ss_pred HHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHC
Q 010439 53 PLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC 108 (510)
Q Consensus 53 pL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ 108 (510)
-|.+|+. ||+.|+++.+++.+ .+ + ...|..|+..-+-+++++|++.
T Consensus 9 tl~~Ai~-GGN~eII~~c~~~~-~~-----~---~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAII-GGNFEIINICLKKN-KP-----D---NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHh-CCCHHHHHHHHHHh-cc-----H---HHHHHHHHHHhhHHHHHHHHHh
Confidence 3455554 45566666555443 11 1 2345556555555666665553
No 213
>KOG4445 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=80.99 E-value=0.68 Score=43.76 Aligned_cols=45 Identities=31% Similarity=0.731 Sum_probs=31.9
Q ss_pred cccccccccccc---eEEeCCCCccchHHhHHHHhc------------------c-----CCcccccccccc
Q 010439 457 SSCVICWEAPVE---GACVPCGHMAGCMSCLSEIKA------------------K-----KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~~~------------------~-----~~~Cp~Cr~~i~ 502 (510)
..|+||+--+.+ ....+|-|.+ .+.|..+... . +..||+||..|.
T Consensus 116 gqCvICLygfa~~~~ft~T~C~Hy~-H~~ClaRyl~~~~~~lrqe~q~~~~~~qh~~~~~eavcpVcre~i~ 186 (368)
T KOG4445|consen 116 GQCVICLYGFASSPAFTVTACDHYM-HFACLARYLTECLTGLRQEIQDAQKERQHMKEQVEAVCPVCRERIK 186 (368)
T ss_pred CceEEEEEeecCCCceeeehhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhHhhhhcc
Confidence 468888876543 3456999999 8999766532 0 125999999885
No 214
>KOG2113 consensus Predicted RNA binding protein, contains KH domain [General function prediction only]
Probab=80.14 E-value=0.49 Score=44.95 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=42.0
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccC-CccccccccccceeEe
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK-GDCPVCRTKINQVIRL 507 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~-~~Cp~Cr~~i~~~~~i 507 (510)
...|.+|++........+|+|.++|..|....+.++ +.|++|...+.....|
T Consensus 136 ti~~iqq~tnt~I~T~v~~~~~Vf~Vtg~~~nC~kra~s~eie~ta~~ra~~i 188 (394)
T KOG2113|consen 136 TIKRIQQFTNTYIATPVRCGEPVFCVTGAPKNCVKRARSCEIEQTAVTRAGQI 188 (394)
T ss_pred ccchheecccceEeeeccCCCceEEEecCCcchhhhccccchhhhhhhhhhcc
Confidence 357999999999999999999999999987775443 4699998776665554
No 215
>KOG1941 consensus Acetylcholine receptor-associated protein of the synapse (rapsyn) [Extracellular structures]
Probab=79.66 E-value=0.56 Score=45.94 Aligned_cols=47 Identities=30% Similarity=0.675 Sum_probs=35.9
Q ss_pred ccccccccccc----ccceEEeCCCCccchHHhHHHHhccC--Ccccccccccc
Q 010439 455 SSSSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 502 (510)
Q Consensus 455 ~~~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 502 (510)
.+.-|..|-+. +..---+||.|.| ...|...+..++ ..||-||+-+.
T Consensus 364 ~~L~Cg~CGe~~Glk~e~LqALpCsHIf-H~rCl~e~L~~n~~rsCP~CrklrS 416 (518)
T KOG1941|consen 364 TELYCGLCGESIGLKNERLQALPCSHIF-HLRCLQEILENNGTRSCPNCRKLRS 416 (518)
T ss_pred HhhhhhhhhhhhcCCcccccccchhHHH-HHHHHHHHHHhCCCCCCccHHHHHh
Confidence 44679999876 3444467999999 999999887655 47999995444
No 216
>KOG4217 consensus Nuclear receptors of the nerve growth factor-induced protein B type [Transcription]
Probab=78.59 E-value=9.1 Score=38.84 Aligned_cols=30 Identities=23% Similarity=0.606 Sum_probs=21.3
Q ss_pred CCcccccccccccccceEEeCCCCccc--hHHhHHHHh
Q 010439 453 DGSSSSCVICWEAPVEGACVPCGHMAG--CMSCLSEIK 488 (510)
Q Consensus 453 ~~~~~~C~iC~~~~~~~~~~pCgH~~~--C~~C~~~~~ 488 (510)
...+..|.||-|+.. |.|.-+ |+.|---.+
T Consensus 266 ~~~e~~CAVCgDnAa------CqHYGvRTCEGCKGFFK 297 (605)
T KOG4217|consen 266 LSAEGLCAVCGDNAA------CQHYGVRTCEGCKGFFK 297 (605)
T ss_pred CCccceeeecCChHH------hhhcCccccccchHHHH
Confidence 344689999998865 777653 888865444
No 217
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=75.79 E-value=2.4 Score=40.42 Aligned_cols=49 Identities=24% Similarity=0.586 Sum_probs=31.9
Q ss_pred Cccccccccccc-------------------ccceEEeCCCCccchHHhHHHHhcc---------CCccccccccccc
Q 010439 454 GSSSSCVICWEA-------------------PVEGACVPCGHMAGCMSCLSEIKAK---------KGDCPVCRTKINQ 503 (510)
Q Consensus 454 ~~~~~C~iC~~~-------------------~~~~~~~pCgH~~~C~~C~~~~~~~---------~~~Cp~Cr~~i~~ 503 (510)
..+.+|++|+.. +.+-.|-||||++ -+.=+.-|.+. ..-||.|-.....
T Consensus 339 ~~~r~CPmC~~~gp~V~L~lG~E~~f~vD~G~pthaF~PCGHv~-sekt~~YWs~iplPhGT~~f~a~CPFC~~~L~g 415 (429)
T KOG3842|consen 339 QRERECPMCRVVGPYVPLWLGCEAGFYVDAGPPTHAFNPCGHVC-SEKTVKYWSQIPLPHGTHAFHAACPFCATQLAG 415 (429)
T ss_pred cccCcCCeeeeecceeeeeccccceeEecCCCcccccCCccccc-chhhhhHhhcCcCCCccccccccCcchhhhhcc
Confidence 345799999863 2344577999995 44444555442 1259999887753
No 218
>KOG4362 consensus Transcriptional regulator BRCA1 [Replication, recombination and repair; Transcription]
Probab=75.22 E-value=0.83 Score=48.76 Aligned_cols=47 Identities=28% Similarity=0.648 Sum_probs=38.5
Q ss_pred ccccccccccccceEEeCCCCccchHHhHHHHhccC---Cccccccccccc
Q 010439 456 SSSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKINQ 503 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i~~ 503 (510)
..+|.||+....+++.+.|-|.| |..|........ ..||+|+..+.+
T Consensus 21 ~lEc~ic~~~~~~p~~~kc~~~~-l~~~~n~~f~~~~~~~~~~lc~~~~eK 70 (684)
T KOG4362|consen 21 ILECPICLEHVKEPSLLKCDHIF-LKFCLNKLFESKKGPKQCALCKSDIEK 70 (684)
T ss_pred hccCCceeEEeeccchhhhhHHH-HhhhhhceeeccCccccchhhhhhhhh
Confidence 36899999999989999999999 999987665443 379999977654
No 219
>PF12906 RINGv: RING-variant domain; PDB: 2D8S_A 1VYX_A.
Probab=74.26 E-value=1.3 Score=29.95 Aligned_cols=39 Identities=31% Similarity=0.614 Sum_probs=24.9
Q ss_pred ccccccccc--ceEEeCCCC----ccchHHhHHHHhccC--Cccccc
Q 010439 459 CVICWEAPV--EGACVPCGH----MAGCMSCLSEIKAKK--GDCPVC 497 (510)
Q Consensus 459 C~iC~~~~~--~~~~~pCgH----~~~C~~C~~~~~~~~--~~Cp~C 497 (510)
|-||++... .....||+- .++...|..+|...+ .+|++|
T Consensus 1 CrIC~~~~~~~~~li~pC~C~Gs~~~vH~~CL~~W~~~~~~~~C~~C 47 (47)
T PF12906_consen 1 CRICLEGEEEDEPLISPCRCKGSMKYVHRSCLERWIRESGNRKCEIC 47 (47)
T ss_dssp ETTTTEE-SSSS-EE-SSS-SSCCGSEECCHHHHHHHHHT-SB-TTT
T ss_pred CeEeCCcCCCCCceecccccCCCcchhHHHHHHHHHHhcCCCcCCCC
Confidence 678887743 256779873 245888999998743 479887
No 220
>KOG0298 consensus DEAD box-containing helicase-like transcription factor/DNA repair protein [Replication, recombination and repair]
Probab=73.71 E-value=1 Score=51.11 Aligned_cols=44 Identities=27% Similarity=0.678 Sum_probs=37.0
Q ss_pred ccccccccccc-ceEEeCCCCccchHHhHHHHhccCCccccccccc
Q 010439 457 SSCVICWEAPV-EGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKI 501 (510)
Q Consensus 457 ~~C~iC~~~~~-~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i 501 (510)
..|.||.+..+ ......|||.+ |..|...|...+..||+|...+
T Consensus 1154 ~~c~ic~dil~~~~~I~~cgh~~-c~~c~~~~l~~~s~~~~~ksi~ 1198 (1394)
T KOG0298|consen 1154 FVCEICLDILRNQGGIAGCGHEP-CCRCDELWLYASSRCPICKSIK 1198 (1394)
T ss_pred cchHHHHHHHHhcCCeeeechhH-hhhHHHHHHHHhccCcchhhhh
Confidence 48999999876 44555799999 9999999999888999997544
No 221
>KOG0827 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=72.70 E-value=2.5 Score=41.58 Aligned_cols=28 Identities=32% Similarity=0.916 Sum_probs=22.7
Q ss_pred CCCCccchHHhHHHHhcc---CCccccccccc
Q 010439 473 PCGHMAGCMSCLSEIKAK---KGDCPVCRTKI 501 (510)
Q Consensus 473 pCgH~~~C~~C~~~~~~~---~~~Cp~Cr~~i 501 (510)
-|||.| ...|...|-.. ++.||+||-.+
T Consensus 25 ~cGhif-h~~cl~qwfe~~Ps~R~cpic~ik~ 55 (465)
T KOG0827|consen 25 TCGHIF-HTTCLTQWFEGDPSNRGCPICQIKL 55 (465)
T ss_pred chhhHH-HHHHHHHHHccCCccCCCCceeecc
Confidence 399999 99999999765 24799998444
No 222
>KOG2068 consensus MOT2 transcription factor [Transcription]
Probab=71.98 E-value=2.3 Score=41.18 Aligned_cols=46 Identities=35% Similarity=0.795 Sum_probs=35.8
Q ss_pred cccccccccc----cceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 457 SSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
..|+||.+-. ...+-.||+|.. |..|...+.....+||.||.+...
T Consensus 250 ~s~p~~~~~~~~~d~~~lP~~~~~~~-~l~~~~t~~~~~~~~~~~rk~~~~ 299 (327)
T KOG2068|consen 250 PSCPICYEDLDLTDSNFLPCPCGFRL-CLFCHKTISDGDGRCPGCRKPYER 299 (327)
T ss_pred CCCCCCCCcccccccccccccccccc-hhhhhhcccccCCCCCccCCcccc
Confidence 4788888742 333344789996 999999999888899999987764
No 223
>KOG4185 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=71.84 E-value=2.4 Score=41.44 Aligned_cols=31 Identities=32% Similarity=0.863 Sum_probs=25.7
Q ss_pred EEeCCCCccchHHhHHHHhccCC-ccccccccc
Q 010439 470 ACVPCGHMAGCMSCLSEIKAKKG-DCPVCRTKI 501 (510)
Q Consensus 470 ~~~pCgH~~~C~~C~~~~~~~~~-~Cp~Cr~~i 501 (510)
..+.|||.+ |..|+..+..... .||.||.+.
T Consensus 23 ~~l~c~h~~-c~~c~~~l~~~~~i~cpfcR~~~ 54 (296)
T KOG4185|consen 23 RVLKCGHTI-CQNCASKLLGNSRILCPFCRETT 54 (296)
T ss_pred cccccCcee-hHhHHHHHhcCceeeccCCCCcc
Confidence 345699999 9999999987654 799999984
No 224
>PF04216 FdhE: Protein involved in formate dehydrogenase formation; InterPro: IPR006452 This family of sequences describe an accessory protein required for the assembly of formate dehydrogenase of certain proteobacteria although not present in the final complex []. The exact nature of the function of FdhE in the assembly of the complex is unknown, but considering the presence of selenocysteine, molybdopterin, iron-sulphur clusters and cytochrome b556, it is likely to be involved in the insertion of cofactors. ; GO: 0005737 cytoplasm; PDB: 2FIY_B.
Probab=71.23 E-value=1.1 Score=43.60 Aligned_cols=51 Identities=22% Similarity=0.510 Sum_probs=25.8
Q ss_pred cccccccccccceEEeCC---C--CccchHHhHHHHhccCCccccccccccceeEee
Q 010439 457 SSCVICWEAPVEGACVPC---G--HMAGCMSCLSEIKAKKGDCPVCRTKINQVIRLY 508 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pC---g--H~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~~~i~ 508 (510)
..|+||-..+.-.++..= | |.+ |..|...|.....+||.|...-...+..|
T Consensus 173 g~CPvCGs~P~~s~l~~~~~~G~R~L~-Cs~C~t~W~~~R~~Cp~Cg~~~~~~l~~~ 228 (290)
T PF04216_consen 173 GYCPVCGSPPVLSVLRGGEREGKRYLH-CSLCGTEWRFVRIKCPYCGNTDHEKLEYF 228 (290)
T ss_dssp SS-TTT---EEEEEEE------EEEEE-ETTT--EEE--TTS-TTT---SS-EEE--
T ss_pred CcCCCCCCcCceEEEecCCCCccEEEE-cCCCCCeeeecCCCCcCCCCCCCcceeeE
Confidence 689999999877777654 3 445 99999999877778999987655554443
No 225
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.75 E-value=1.3 Score=48.10 Aligned_cols=43 Identities=28% Similarity=0.604 Sum_probs=32.0
Q ss_pred cccccccccc-cceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 457 SSCVICWEAP-VEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~-~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
..|..|--.. .-.|...|||.| ...|.+ ....+||.|+.....
T Consensus 841 skCs~C~~~LdlP~VhF~CgHsy-HqhC~e---~~~~~CP~C~~e~~~ 884 (933)
T KOG2114|consen 841 SKCSACEGTLDLPFVHFLCGHSY-HQHCLE---DKEDKCPKCLPELRG 884 (933)
T ss_pred eeecccCCccccceeeeecccHH-HHHhhc---cCcccCCccchhhhh
Confidence 4799997654 345566899999 999998 334579999885443
No 226
>KOG1940 consensus Zn-finger protein [General function prediction only]
Probab=67.70 E-value=1.7 Score=41.47 Aligned_cols=46 Identities=26% Similarity=0.645 Sum_probs=36.1
Q ss_pred ccccccccc----ccceEEeCCCCccchHHhHHHHhccCCccccccccccce
Q 010439 457 SSCVICWEA----PVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 457 ~~C~iC~~~----~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
..|+||.+. ...+..++|||.. -..|...+....=.||+|.. +...
T Consensus 159 ~ncPic~e~l~~s~~~~~~~~CgH~~-h~~cf~e~~~~~y~CP~C~~-~~d~ 208 (276)
T KOG1940|consen 159 FNCPICKEYLFLSFEDAGVLKCGHYM-HSRCFEEMICEGYTCPICSK-PGDM 208 (276)
T ss_pred CCCchhHHHhccccccCCccCcccch-HHHHHHHHhccCCCCCcccc-hHHH
Confidence 359999975 5677788999999 79998888765557999988 5443
No 227
>PF08746 zf-RING-like: RING-like domain; InterPro: IPR014857 This is a zinc finger domain that is related to the C3HC4 RING finger domain (IPR001841 from INTERPRO). ; PDB: 3NW0_A 2CT0_A.
Probab=67.53 E-value=6.5 Score=26.02 Aligned_cols=38 Identities=24% Similarity=0.615 Sum_probs=20.9
Q ss_pred cccccccccceEEeC---CCCccchHHhHHHHhccCC--ccccc
Q 010439 459 CVICWEAPVEGACVP---CGHMAGCMSCLSEIKAKKG--DCPVC 497 (510)
Q Consensus 459 C~iC~~~~~~~~~~p---CgH~~~C~~C~~~~~~~~~--~Cp~C 497 (510)
|.+|.+.....+.-+ |+=.+ ...|.....+... +||.|
T Consensus 1 C~~C~~iv~~G~~C~~~~C~~r~-H~~C~~~y~r~~~~~~CP~C 43 (43)
T PF08746_consen 1 CEACKEIVTQGQRCSNRDCNVRL-HDDCFKKYFRHRSNPKCPNC 43 (43)
T ss_dssp -TTT-SB-SSSEE-SS--S--EE--HHHHHHHTTT-SS-B-TTT
T ss_pred CcccchhHeeeccCCCCccCchH-HHHHHHHHHhcCCCCCCcCC
Confidence 566777655555444 76666 8899999887654 79987
No 228
>PF02891 zf-MIZ: MIZ/SP-RING zinc finger; InterPro: IPR004181 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MIZ-type zinc finger domains. Miz1 (Msx-interacting-zinc finger) is a zinc finger-containing protein with homology to the yeast protein, Nfi-1. Miz1 is a sequence specific DNA binding protein that can function as a positive-acting transcription factor. Miz1 binds to the homeobox protein Msx2, enhancing the specific DNA-binding ability of Msx2 []. Other proteins containing this domain include the human pias family (protein inhibitor of activated STAT protein). More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3I2D_A.
Probab=67.40 E-value=3.1 Score=28.58 Aligned_cols=43 Identities=21% Similarity=0.510 Sum_probs=20.4
Q ss_pred cccccccccccceEE-eCCCCccchHHhHHHHhc----cCCcccccccc
Q 010439 457 SSCVICWEAPVEGAC-VPCGHMAGCMSCLSEIKA----KKGDCPVCRTK 500 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~-~pCgH~~~C~~C~~~~~~----~~~~Cp~Cr~~ 500 (510)
..|+|...+...++- ..|.|.- |++=..-+.. ..++||+|.++
T Consensus 3 L~CPls~~~i~~P~Rg~~C~H~~-CFDl~~fl~~~~~~~~W~CPiC~~~ 50 (50)
T PF02891_consen 3 LRCPLSFQRIRIPVRGKNCKHLQ-CFDLESFLESNQRTPKWKCPICNKP 50 (50)
T ss_dssp SB-TTTSSB-SSEEEETT--SS---EEHHHHHHHHHHS---B-TTT---
T ss_pred eeCCCCCCEEEeCccCCcCcccc-eECHHHHHHHhhccCCeECcCCcCc
Confidence 468888888777664 4799998 7665433332 23589999864
No 229
>PRK03564 formate dehydrogenase accessory protein FdhE; Provisional
Probab=67.17 E-value=2.5 Score=41.21 Aligned_cols=44 Identities=25% Similarity=0.468 Sum_probs=32.4
Q ss_pred ccccccccccccceEEe---CCCCccc-hHHhHHHHhccCCccccccc
Q 010439 456 SSSCVICWEAPVEGACV---PCGHMAG-CMSCLSEIKAKKGDCPVCRT 499 (510)
Q Consensus 456 ~~~C~iC~~~~~~~~~~---pCgH~~~-C~~C~~~~~~~~~~Cp~Cr~ 499 (510)
...|+||-..+.-.+.. .=|+.+. |..|...|....-+||.|..
T Consensus 187 ~~~CPvCGs~P~~s~v~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~ 234 (309)
T PRK03564 187 RQFCPVCGSMPVSSVVQIGTTQGLRYLHCNLCESEWHVVRVKCSNCEQ 234 (309)
T ss_pred CCCCCCCCCcchhheeeccCCCCceEEEcCCCCCcccccCccCCCCCC
Confidence 36899999988655432 2343332 99999999887778999976
No 230
>KOG3799 consensus Rab3 effector RIM1 and related proteins, contain Rab3a binding domain [Intracellular trafficking, secretion, and vesicular transport]
Probab=66.49 E-value=2.8 Score=34.70 Aligned_cols=28 Identities=32% Similarity=0.895 Sum_probs=19.4
Q ss_pred Cccccccccccc-ccceEEeCCCCccchHHhHHHH
Q 010439 454 GSSSSCVICWEA-PVEGACVPCGHMAGCMSCLSEI 487 (510)
Q Consensus 454 ~~~~~C~iC~~~-~~~~~~~pCgH~~~C~~C~~~~ 487 (510)
++...|.||... +.+ -|||. |..|-.+.
T Consensus 63 ~ddatC~IC~KTKFAD----G~GH~--C~YCq~r~ 91 (169)
T KOG3799|consen 63 GDDATCGICHKTKFAD----GCGHN--CSYCQTRF 91 (169)
T ss_pred CcCcchhhhhhccccc----ccCcc--cchhhhhH
Confidence 455789999865 454 59998 66665554
No 231
>TIGR01562 FdhE formate dehydrogenase accessory protein FdhE. The only sequence scoring between trusted and noise is that from Aquifex aeolicus, which shows certain structural differences from the proteobacterial forms in the alignment. However it is notable that A. aeolicus also has a sequence scoring above trusted to the alpha subunit of formate dehydrogenase (TIGR01553).
Probab=65.21 E-value=1.9 Score=41.99 Aligned_cols=44 Identities=23% Similarity=0.461 Sum_probs=32.7
Q ss_pred cccccccccccceEEeC----CCCccc-hHHhHHHHhccCCcccccccc
Q 010439 457 SSCVICWEAPVEGACVP----CGHMAG-CMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~p----CgH~~~-C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
..|+||-..+.-.++.. =|+.+. |..|...|....-+||.|...
T Consensus 185 ~~CPvCGs~P~~s~~~~~~~~~G~RyL~CslC~teW~~~R~~C~~Cg~~ 233 (305)
T TIGR01562 185 TLCPACGSPPVASMVRQGGKETGLRYLSCSLCATEWHYVRVKCSHCEES 233 (305)
T ss_pred CcCCCCCChhhhhhhcccCCCCCceEEEcCCCCCcccccCccCCCCCCC
Confidence 58999999886554432 343332 999999998877789999774
No 232
>KOG1952 consensus Transcription factor NF-X1, contains NFX-type Zn2+-binding and R3H domains [Transcription]
Probab=64.60 E-value=3.1 Score=45.18 Aligned_cols=46 Identities=24% Similarity=0.625 Sum_probs=33.5
Q ss_pred Ccccccccccccccc--eE--EeCCCCccchHHhHHHHhcc-------CCcccccccc
Q 010439 454 GSSSSCVICWEAPVE--GA--CVPCGHMAGCMSCLSEIKAK-------KGDCPVCRTK 500 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~--~~--~~pCgH~~~C~~C~~~~~~~-------~~~Cp~Cr~~ 500 (510)
....+|.||.++... .+ .-.|-|+| ...|+..|-+. .++||.|+..
T Consensus 189 ~~~yeCmIC~e~I~~t~~~WSC~sCYhVF-Hl~CI~~WArs~ek~~~~~WrCP~Cqsv 245 (950)
T KOG1952|consen 189 NRKYECMICTERIKRTAPVWSCKSCYHVF-HLNCIKKWARSSEKTGQDGWRCPACQSV 245 (950)
T ss_pred cCceEEEEeeeeccccCCceecchhhhhh-hHHHHHHHHHHhhhccCccccCCcccch
Confidence 345799999998432 22 33577999 99999999753 2589999843
No 233
>KOG3113 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.97 E-value=10 Score=35.24 Aligned_cols=45 Identities=27% Similarity=0.317 Sum_probs=32.9
Q ss_pred cccccccc----ccccceEEeCCCCccchHHhHHHHhccCCccccccccccc
Q 010439 456 SSSCVICW----EAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 456 ~~~C~iC~----~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
...|+|-- +..+-.++.+|||+| =+.-...++. ..|++|.+.+..
T Consensus 111 ~fiCPvtgleMng~~~F~~l~~CGcV~-SerAlKeika--s~C~~C~a~y~~ 159 (293)
T KOG3113|consen 111 RFICPVTGLEMNGKYRFCALRCCGCVF-SERALKEIKA--SVCHVCGAAYQE 159 (293)
T ss_pred eeecccccceecceEEEEEEeccceec-cHHHHHHhhh--ccccccCCcccc
Confidence 35788743 345667788999999 6766666664 369999998864
No 234
>KOG4218 consensus Nuclear hormone receptor betaFTZ-F1 [Transcription]
Probab=63.06 E-value=4.5 Score=39.12 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=17.9
Q ss_pred CCcccccccccccccceEEeCCCCccchHHhHHHH
Q 010439 453 DGSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEI 487 (510)
Q Consensus 453 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~ 487 (510)
+..+..|+||-|+..-.-. |-. .|+.|---.
T Consensus 12 edl~ElCPVCGDkVSGYHY---GLL-TCESCKGFF 42 (475)
T KOG4218|consen 12 EDLGELCPVCGDKVSGYHY---GLL-TCESCKGFF 42 (475)
T ss_pred cccccccccccCcccccee---eee-ehhhhhhHH
Confidence 3445689999988654321 222 277775433
No 235
>KOG3899 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.06 E-value=4.2 Score=38.40 Aligned_cols=28 Identities=36% Similarity=0.888 Sum_probs=21.7
Q ss_pred CCCccchHHhHHHHhc-------------cCCcccccccccc
Q 010439 474 CGHMAGCMSCLSEIKA-------------KKGDCPVCRTKIN 502 (510)
Q Consensus 474 CgH~~~C~~C~~~~~~-------------~~~~Cp~Cr~~i~ 502 (510)
|+-+. |.+|..+|-. ++..||.||+.++
T Consensus 325 crp~w-c~~cla~~f~~rq~~v~r~~~~~~~~~cp~cr~~fc 365 (381)
T KOG3899|consen 325 CRPLW-CRSCLAQIFIGRQDNVYRYEYHRGSAQCPTCRKNFC 365 (381)
T ss_pred cccHH-HHHHHHHHHhhcccchhHHHHHhcCCCCcchhhceE
Confidence 66677 9999988743 3457999999876
No 236
>COG5183 SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification]
Probab=62.05 E-value=6.5 Score=42.55 Aligned_cols=53 Identities=23% Similarity=0.441 Sum_probs=39.7
Q ss_pred ccccccccccc--ccceEEeCCCCc----cchHHhHHHHhccC--CccccccccccceeEee
Q 010439 455 SSSSCVICWEA--PVEGACVPCGHM----AGCMSCLSEIKAKK--GDCPVCRTKINQVIRLY 508 (510)
Q Consensus 455 ~~~~C~iC~~~--~~~~~~~pCgH~----~~C~~C~~~~~~~~--~~Cp~Cr~~i~~~~~i~ 508 (510)
+...|-||... +-++.+-||... +...+|...|...+ .+|-+|+.++. +..||
T Consensus 11 d~~~CRICr~e~~~d~pLfhPCKC~GSIkYiH~eCL~eW~~~s~~~kCdiChy~~~-Fk~IY 71 (1175)
T COG5183 11 DKRSCRICRTEDIRDDPLFHPCKCSGSIKYIHRECLMEWMECSGTKKCDICHYEYK-FKDIY 71 (1175)
T ss_pred cchhceeecCCCCCCCcCcccccccchhHHHHHHHHHHHHhcCCCcceeeecceee-eeeec
Confidence 44789999854 778999999853 34899999998754 48999988763 44454
No 237
>KOG3053 consensus Uncharacterized conserved protein [Function unknown]
Probab=61.11 E-value=4.8 Score=37.43 Aligned_cols=51 Identities=27% Similarity=0.582 Sum_probs=34.4
Q ss_pred CCCcccccccccccccceE----EeCCC-----CccchHHhHHHHhccC--------Cccccccccccc
Q 010439 452 DDGSSSSCVICWEAPVEGA----CVPCG-----HMAGCMSCLSEIKAKK--------GDCPVCRTKINQ 503 (510)
Q Consensus 452 ~~~~~~~C~iC~~~~~~~~----~~pCg-----H~~~C~~C~~~~~~~~--------~~Cp~Cr~~i~~ 503 (510)
+.+.+..|-||+....+-. .-||. |-+ ...|..+|...+ ..||.|+.....
T Consensus 16 ~~e~eR~CWiCF~TdeDn~~a~WV~PCrCRGt~KWV-HqsCL~rWiDEK~~~n~~q~V~C~QCqTEYii 83 (293)
T KOG3053|consen 16 NQELERCCWICFATDEDNRLAAWVHPCRCRGTTKWV-HQSCLSRWIDEKQRGNPLQTVSCPQCQTEYII 83 (293)
T ss_pred ccccceeEEEEeccCcccchhhhcccccccCccHHH-HHHHHHHHHhHHhcCCCCceeechhhcchhee
Confidence 3455679999997644322 34887 334 899999996532 259999886543
No 238
>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center. The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=54.04 E-value=5.1 Score=24.73 Aligned_cols=15 Identities=27% Similarity=0.618 Sum_probs=11.3
Q ss_pred CccccccccccceeE
Q 010439 492 GDCPVCRTKINQVIR 506 (510)
Q Consensus 492 ~~Cp~Cr~~i~~~~~ 506 (510)
..||+|..+-..|+.
T Consensus 18 ~~CP~Cg~~~~~F~~ 32 (33)
T cd00350 18 WVCPVCGAPKDKFEK 32 (33)
T ss_pred CcCcCCCCcHHHcEE
Confidence 479999887766654
No 239
>KOG3842 consensus Adaptor protein Pellino [Signal transduction mechanisms]
Probab=53.81 E-value=6.7 Score=37.53 Aligned_cols=43 Identities=21% Similarity=0.581 Sum_probs=24.8
Q ss_pred ccccceEEeCCCCccch--HHhHHHHhccCCccccccccccceeEe
Q 010439 464 EAPVEGACVPCGHMAGC--MSCLSEIKAKKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 464 ~~~~~~~~~pCgH~~~C--~~C~~~~~~~~~~Cp~Cr~~i~~~~~i 507 (510)
+...-.|.+.|||+-.. +-|-+.--.+.++||+||. +...+.+
T Consensus 312 ~~~QP~vYl~CGHV~G~H~WG~~e~~g~~~r~CPmC~~-~gp~V~L 356 (429)
T KOG3842|consen 312 DEKQPWVYLNCGHVHGYHNWGVRENTGQRERECPMCRV-VGPYVPL 356 (429)
T ss_pred cccCCeEEEeccccccccccccccccCcccCcCCeeee-ecceeee
Confidence 34455778899988632 1222222223468999987 4445555
No 240
>PF04423 Rad50_zn_hook: Rad50 zinc hook motif; InterPro: IPR007517 The Mre11 complex (Mre11 Rad50 Nbs1) is central to chromosomal maintenance and functions in homologous recombination, telomere maintenance and sister chromatid association. The Rad50 coiled-coil region contains a dimer interface at the apex of the coiled coils in which pairs of conserved Cys-X-X-Cys motifs form interlocking hooks that bind one Zn ion. This alignment includes the zinc hook motif and a short stretch of coiled-coil on either side.; GO: 0004518 nuclease activity, 0005524 ATP binding, 0008270 zinc ion binding, 0006281 DNA repair; PDB: 1L8D_B.
Probab=53.56 E-value=5.6 Score=27.71 Aligned_cols=17 Identities=35% Similarity=0.970 Sum_probs=7.7
Q ss_pred HhccCCccccccccccc
Q 010439 487 IKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 487 ~~~~~~~Cp~Cr~~i~~ 503 (510)
+......||+|..++..
T Consensus 16 l~~~~~~CPlC~r~l~~ 32 (54)
T PF04423_consen 16 LKEAKGCCPLCGRPLDE 32 (54)
T ss_dssp HTT-SEE-TTT--EE-H
T ss_pred HhcCCCcCCCCCCCCCH
Confidence 33333489999998863
No 241
>KOG3039 consensus Uncharacterized conserved protein [Function unknown]
Probab=53.51 E-value=9.7 Score=35.22 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=28.8
Q ss_pred CcccccccccccccceEEeCCCCccchHHhHHHH
Q 010439 454 GSSSSCVICWEAPVEGACVPCGHMAGCMSCLSEI 487 (510)
Q Consensus 454 ~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~ 487 (510)
..-..|+.|+...+++|+.|=||.| |.+|+...
T Consensus 41 K~FdcCsLtLqPc~dPvit~~Gylf-drEaILe~ 73 (303)
T KOG3039|consen 41 KPFDCCSLTLQPCRDPVITPDGYLF-DREAILEY 73 (303)
T ss_pred CCcceeeeecccccCCccCCCCeee-eHHHHHHH
Confidence 3446899999999999999999999 99998654
No 242
>PF13240 zinc_ribbon_2: zinc-ribbon domain
Probab=51.15 E-value=2.6 Score=23.74 Aligned_cols=22 Identities=36% Similarity=0.807 Sum_probs=13.2
Q ss_pred hHHhHHHHhccCCccccccccc
Q 010439 480 CMSCLSEIKAKKGDCPVCRTKI 501 (510)
Q Consensus 480 C~~C~~~~~~~~~~Cp~Cr~~i 501 (510)
|..|-..+......||.|..++
T Consensus 2 Cp~CG~~~~~~~~fC~~CG~~l 23 (23)
T PF13240_consen 2 CPNCGAEIEDDAKFCPNCGTPL 23 (23)
T ss_pred CcccCCCCCCcCcchhhhCCcC
Confidence 5555555555455677776653
No 243
>PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A.
Probab=50.22 E-value=13 Score=27.82 Aligned_cols=47 Identities=26% Similarity=0.589 Sum_probs=17.7
Q ss_pred ccccccccccc----cceEEe---CCCCccchHHhHHHH-hccCCccccccccccc
Q 010439 456 SSSCVICWEAP----VEGACV---PCGHMAGCMSCLSEI-KAKKGDCPVCRTKINQ 503 (510)
Q Consensus 456 ~~~C~iC~~~~----~~~~~~---pCgH~~~C~~C~~~~-~~~~~~Cp~Cr~~i~~ 503 (510)
...|.||-|.. ---+|+ -|+--+ |..|.+-= +..+..||.|+.....
T Consensus 9 ~qiCqiCGD~VGl~~~Ge~FVAC~eC~fPv-Cr~CyEYErkeg~q~CpqCkt~ykr 63 (80)
T PF14569_consen 9 GQICQICGDDVGLTENGEVFVACHECAFPV-CRPCYEYERKEGNQVCPQCKTRYKR 63 (80)
T ss_dssp S-B-SSS--B--B-SSSSB--S-SSS------HHHHHHHHHTS-SB-TTT--B---
T ss_pred CcccccccCccccCCCCCEEEEEcccCCcc-chhHHHHHhhcCcccccccCCCccc
Confidence 36899998762 112344 445444 99997543 3345579999987653
No 244
>KOG3970 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=47.95 E-value=15 Score=33.50 Aligned_cols=45 Identities=27% Similarity=0.588 Sum_probs=33.3
Q ss_pred ccccccccc--ccceEEeCCCCccchHHhHHHHhcc--------CCcccccccccc
Q 010439 457 SSCVICWEA--PVEGACVPCGHMAGCMSCLSEIKAK--------KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~--~~~~~~~pCgH~~~C~~C~~~~~~~--------~~~Cp~Cr~~i~ 502 (510)
..|..|-.. ..+.+-+-|-|.| .+.|...+... .-.||.|..+|-
T Consensus 51 pNC~LC~t~La~gdt~RLvCyhlf-HW~ClneraA~lPanTAPaGyqCP~Cs~eiF 105 (299)
T KOG3970|consen 51 PNCRLCNTPLASGDTTRLVCYHLF-HWKCLNERAANLPANTAPAGYQCPCCSQEIF 105 (299)
T ss_pred CCCceeCCccccCcceeehhhhhH-HHHHhhHHHhhCCCcCCCCcccCCCCCCccC
Confidence 467777654 3456677899999 99999887643 126999988774
No 245
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=47.72 E-value=2.4 Score=44.37 Aligned_cols=140 Identities=18% Similarity=-0.011 Sum_probs=82.8
Q ss_pred hhhcCCchHHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCChHHHHHHHhC----------Cc--------HHHHHHHHH
Q 010439 11 HQQRQSKDELLYQWVIAGDVDAIRALRSQGASLEWMDKEGKTPLIVACMDS----------GL--------INVAKTLIE 72 (510)
Q Consensus 11 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~~----------~~--------~~~v~~Ll~ 72 (510)
++....+.++++++...|....++.....+.. +....++.++++... +. .+....|+.
T Consensus 49 ~~~~s~~~~~~~l~~~~g~~~~~~~a~~fDv~----~~g~~~~gl~~aml~a~~~~~~P~~~a~~~~~~~~~~~~~~ll~ 124 (503)
T KOG0513|consen 49 NQGVSLAYLELRLQNIDGDPSAARLADYFDVS----IAGTNTGGLITAMLFAPNDCGRPRFGATDILWKFNLEKAPKLLE 124 (503)
T ss_pred hhhhhhcccHHHHHhccCChHhhHhhhccCce----eeccCCchhhhhhhhccccccCccccccchhhhhhhcCCCcccc
Confidence 44566778899999999988876665544321 222333333332210 11 122333444
Q ss_pred cCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcccccccccccc
Q 010439 73 LGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHICYFCGWLREF 152 (510)
Q Consensus 73 ~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~d~ 152 (510)
...+.|.. -....++++........+++..++.++.....++..|.|+||.+...++. +..+ . ..+.
T Consensus 125 ~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~~~~~--~~~i-------~--~ldl 191 (503)
T KOG0513|consen 125 KFDDPNFI--KGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLTKENL--LVVI-------P--CLDL 191 (503)
T ss_pred cccccccc--ccccccceeeeecCccccceeecccccccchhhhhcCCceeeeeccCCCc--ceEE-------E--eecc
Confidence 44444422 34566788888888888887777777666667777899999998888776 1111 1 3455
Q ss_pred CCCCHHHHHhhhcCCH
Q 010439 153 YGPSFLEALAPQLMSR 168 (510)
Q Consensus 153 ~g~t~L~~~A~~~~~~ 168 (510)
++.+|++ +.+.....
T Consensus 192 ~~~~P~l-f~~~~~~~ 206 (503)
T KOG0513|consen 192 KSLTPNL-FSIYDALG 206 (503)
T ss_pred CcCCcee-eeeecccc
Confidence 5677777 55544333
No 246
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=47.56 E-value=7.6 Score=39.43 Aligned_cols=32 Identities=28% Similarity=0.682 Sum_probs=22.0
Q ss_pred cccccccccccc----eEEeCCCCccchHHhHHHHhc
Q 010439 457 SSCVICWEAPVE----GACVPCGHMAGCMSCLSEIKA 489 (510)
Q Consensus 457 ~~C~iC~~~~~~----~~~~pCgH~~~C~~C~~~~~~ 489 (510)
..|.||+..... ....-|+|.| |..|..+...
T Consensus 147 ~~C~iC~~e~~~~~~~f~~~~C~H~f-C~~C~k~~ie 182 (384)
T KOG1812|consen 147 EECGICFVEDPEAEDMFSVLKCGHRF-CKDCVKQHIE 182 (384)
T ss_pred ccCccCccccccHhhhHHHhcccchh-hhHHhHHHhh
Confidence 589999932211 1134699999 9999886554
No 247
>PF04710 Pellino: Pellino; InterPro: IPR006800 Pellino is involved in Toll-like signalling pathways, and associates with the kinase domain of the Pelle Ser/Thr kinase [, , ].; PDB: 3EGB_B 3EGA_A.
Probab=45.99 E-value=6.8 Score=39.02 Aligned_cols=41 Identities=22% Similarity=0.546 Sum_probs=0.0
Q ss_pred ccceEEeCCCCccchHHhHHHHhc--cCCccccccccccceeEe
Q 010439 466 PVEGACVPCGHMAGCMSCLSEIKA--KKGDCPVCRTKINQVIRL 507 (510)
Q Consensus 466 ~~~~~~~pCgH~~~C~~C~~~~~~--~~~~Cp~Cr~~i~~~~~i 507 (510)
..-.|++.|||+..-..=..+-.. ..+.||+||. +..++++
T Consensus 301 ~qP~VYl~CGHVhG~h~Wg~~~~~~~~~r~CPlCr~-~g~~V~L 343 (416)
T PF04710_consen 301 RQPWVYLNCGHVHGYHNWGQDSDRDPRSRTCPLCRQ-VGPYVPL 343 (416)
T ss_dssp --------------------------------------------
T ss_pred cCceeeccccceeeecccccccccccccccCCCccc-cCCceeE
Confidence 444678899998732221111010 1357999987 4444444
No 248
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=45.27 E-value=11 Score=37.59 Aligned_cols=33 Identities=30% Similarity=0.695 Sum_probs=25.6
Q ss_pred eEEeCCCCccchHHhHHHHhccC--Ccccccccccc
Q 010439 469 GACVPCGHMAGCMSCLSEIKAKK--GDCPVCRTKIN 502 (510)
Q Consensus 469 ~~~~pCgH~~~C~~C~~~~~~~~--~~Cp~Cr~~i~ 502 (510)
.+.+.|||.| =..|+++|..++ ..||.|..+-.
T Consensus 22 ~vsl~cghlF-gs~cie~wl~k~~~~~cp~c~~kat 56 (463)
T KOG1645|consen 22 IVSLQCGHLF-GSQCIEKWLGKKTKMQCPLCSGKAT 56 (463)
T ss_pred Eeeecccccc-cHHHHHHHHhhhhhhhCcccCChhH
Confidence 4566899999 999999998532 37999976543
No 249
>KOG1815 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=45.11 E-value=13 Score=38.68 Aligned_cols=32 Identities=28% Similarity=0.513 Sum_probs=27.3
Q ss_pred cccccccccccc-eEEeCCCCccchHHhHHHHhc
Q 010439 457 SSCVICWEAPVE-GACVPCGHMAGCMSCLSEIKA 489 (510)
Q Consensus 457 ~~C~iC~~~~~~-~~~~pCgH~~~C~~C~~~~~~ 489 (510)
..|-||.+.... .+.+.|||.| |..|......
T Consensus 71 ~~c~ic~~~~~~~~~~~~c~H~~-c~~cw~~yl~ 103 (444)
T KOG1815|consen 71 VQCGICVESYDGEIIGLGCGHPF-CPPCWTGYLG 103 (444)
T ss_pred ccCCcccCCCcchhhhcCCCcHH-HHHHHHHHhh
Confidence 589999999874 8888999999 9999877543
No 250
>COG5109 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]
Probab=43.43 E-value=16 Score=35.10 Aligned_cols=51 Identities=22% Similarity=0.427 Sum_probs=31.9
Q ss_pred ccccccccc---ccceEEeCCCCccchHHhHHHHhccC---Cccccccccc--cceeEee
Q 010439 457 SSCVICWEA---PVEGACVPCGHMAGCMSCLSEIKAKK---GDCPVCRTKI--NQVIRLY 508 (510)
Q Consensus 457 ~~C~iC~~~---~~~~~~~pCgH~~~C~~C~~~~~~~~---~~Cp~Cr~~i--~~~~~i~ 508 (510)
..|+|=.+. .-.++.+.|||++ =.+-..++.+.. -+||+|-.-- ...+|+|
T Consensus 337 FiCPVlKe~~t~ENpP~ml~CgHVI-skeal~~LS~nG~~~FKCPYCP~~~~~~~~~rvr 395 (396)
T COG5109 337 FICPVLKELCTDENPPVMLECGHVI-SKEALSVLSQNGVLSFKCPYCPEMSKYENILRVR 395 (396)
T ss_pred eeccccHhhhcccCCCeeeecccee-eHHHHHHHhhcCcEEeeCCCCCcchhhhhhhccc
Confidence 356663322 2235677899999 788778777532 3799995422 3455554
No 251
>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.
Probab=43.38 E-value=9.1 Score=23.85 Aligned_cols=15 Identities=20% Similarity=0.678 Sum_probs=11.0
Q ss_pred CccccccccccceeE
Q 010439 492 GDCPVCRTKINQVIR 506 (510)
Q Consensus 492 ~~Cp~Cr~~i~~~~~ 506 (510)
..||+|.++-..+.+
T Consensus 19 ~~CP~Cg~~~~~F~~ 33 (34)
T cd00729 19 EKCPICGAPKEKFEE 33 (34)
T ss_pred CcCcCCCCchHHcEE
Confidence 379999887666554
No 252
>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines. Several members are annotated as putative helicases.
Probab=37.52 E-value=6.2 Score=22.95 Aligned_cols=18 Identities=28% Similarity=0.626 Sum_probs=7.3
Q ss_pred HHhHHHHhccCCcccccc
Q 010439 481 MSCLSEIKAKKGDCPVCR 498 (510)
Q Consensus 481 ~~C~~~~~~~~~~Cp~Cr 498 (510)
..|...+....+.||.|.
T Consensus 4 P~C~~~V~~~~~~Cp~CG 21 (26)
T PF10571_consen 4 PECGAEVPESAKFCPHCG 21 (26)
T ss_pred CCCcCCchhhcCcCCCCC
Confidence 333333333333455553
No 253
>PF10083 DUF2321: Uncharacterized protein conserved in bacteria (DUF2321); InterPro: IPR016891 This entry is represented by Bacteriophage 'Lactobacillus prophage Lj928', Orf-Ljo1454. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=37.46 E-value=18 Score=31.14 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=20.6
Q ss_pred CCccchHHhHHHHhccCCccccccccccce
Q 010439 475 GHMAGCMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 475 gH~~~C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
.+.| |..|-..... .||-|..+|...
T Consensus 27 ~~~f-C~kCG~~tI~---~Cp~C~~~IrG~ 52 (158)
T PF10083_consen 27 REKF-CSKCGAKTIT---SCPNCSTPIRGD 52 (158)
T ss_pred HHHH-HHHhhHHHHH---HCcCCCCCCCCc
Confidence 3566 9999877765 599999999754
No 254
>PF07975 C1_4: TFIIH C1-like domain; InterPro: IPR004595 All proteins in this domain for which functions are known are components of the TFIIH complex which is involved in the initiation of transcription and nucleotide excision repair. It includes the yeast transcription factor Ssl1 (Suppressor of stem-loop protein 1) that is essential for translation initiation and affects UV resistance. The C-terminal region is essential for transcription activity. This regions binds three zinc atoms through two independent domain. The first contains a C4 zinc finger motif, whereas the second is characterised by a CX(2)CX(2-4)FCADCD motif. The solution structure of the second C-terminal domain revealed homology with the regulatory domain of protein kinase C [].; GO: 0006281 DNA repair, 0005634 nucleus; PDB: 1Z60_A.
Probab=36.78 E-value=24 Score=24.35 Aligned_cols=25 Identities=28% Similarity=0.741 Sum_probs=15.9
Q ss_pred CCCCccchHHhHHHHhccCCcccccc
Q 010439 473 PCGHMAGCMSCLSEIKAKKGDCPVCR 498 (510)
Q Consensus 473 pCgH~~~C~~C~~~~~~~~~~Cp~Cr 498 (510)
.|++.| |.+|-.-+-..-..||-|-
T Consensus 26 ~C~~~F-C~dCD~fiHE~LH~CPGC~ 50 (51)
T PF07975_consen 26 KCKNHF-CIDCDVFIHETLHNCPGCE 50 (51)
T ss_dssp TTT--B--HHHHHTTTTTS-SSSTT-
T ss_pred CCCCcc-ccCcChhhhccccCCcCCC
Confidence 688888 9999777666556799984
No 255
>PF10764 Gin: Inhibitor of sigma-G Gin; InterPro: IPR019700 Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB [].
Probab=36.72 E-value=30 Score=23.24 Aligned_cols=31 Identities=32% Similarity=0.739 Sum_probs=24.4
Q ss_pred ccccccccccceEEeCCCCccchHHhHHHHhcc
Q 010439 458 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK 490 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~ 490 (510)
.|.||-....+.+.+ .|+.+ |..|-..|...
T Consensus 1 ~CiiC~~~~~~GI~I-~~~fI-C~~CE~~iv~~ 31 (46)
T PF10764_consen 1 KCIICGKEKEEGIHI-YGKFI-CSDCEKEIVNT 31 (46)
T ss_pred CeEeCCCcCCCCEEE-ECeEe-hHHHHHHhccC
Confidence 389999888877665 67666 99999888763
No 256
>KOG3268 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=35.62 E-value=25 Score=30.78 Aligned_cols=47 Identities=28% Similarity=0.735 Sum_probs=32.6
Q ss_pred cccccccccccccce-----E--EeCCCCccchHHhHHHHhcc------C-----Ccccccccccc
Q 010439 455 SSSSCVICWEAPVEG-----A--CVPCGHMAGCMSCLSEIKAK------K-----GDCPVCRTKIN 502 (510)
Q Consensus 455 ~~~~C~iC~~~~~~~-----~--~~pCgH~~~C~~C~~~~~~~------~-----~~Cp~Cr~~i~ 502 (510)
....|.||+.-.-+. + -..||.-| ..-|...|.+. + +.||+|..+|.
T Consensus 164 ~~~~cgicyayqldGTipDqtCdN~qCgkpF-HqiCL~dWLRgilTsRQSFdiiFGeCPYCS~Pia 228 (234)
T KOG3268|consen 164 ELGACGICYAYQLDGTIPDQTCDNIQCGKPF-HQICLTDWLRGILTSRQSFDIIFGECPYCSDPIA 228 (234)
T ss_pred hhhcccceeeeecCCccccccccccccCCcH-HHHHHHHHHHHHhhccceeeeeeccCCCCCCcce
Confidence 335799998543221 1 24799888 88898888752 1 46999998885
No 257
>KOG0825 consensus PHD Zn-finger protein [General function prediction only]
Probab=35.11 E-value=63 Score=35.34 Aligned_cols=46 Identities=11% Similarity=0.166 Sum_probs=29.7
Q ss_pred cccccccccc----cceEEeCCCCccchHHhHHHHhcc------CCccccccccccc
Q 010439 457 SSCVICWEAP----VEGACVPCGHMAGCMSCLSEIKAK------KGDCPVCRTKINQ 503 (510)
Q Consensus 457 ~~C~iC~~~~----~~~~~~pCgH~~~C~~C~~~~~~~------~~~Cp~Cr~~i~~ 503 (510)
..|-||+..+ -...+-.|+|.+ |..|+..|..+ ...|++|..=|..
T Consensus 100 ~~C~~E~S~~~ds~~i~P~~~~~~~~-CP~Ci~s~~DqL~~~~k~c~H~FC~~Ci~s 155 (1134)
T KOG0825|consen 100 PVCEKEHSPDVDSSNICPVQTHVENQ-CPNCLKSCNDQLEESEKHTAHYFCEECVGS 155 (1134)
T ss_pred chhheecCCcccccCcCchhhhhhhh-hhHHHHHHHHHhhccccccccccHHHHhhh
Confidence 3566666552 222223499999 99999988764 1258888665543
No 258
>KOG3576 consensus Ovo and related transcription factors [Transcription]
Probab=33.02 E-value=40 Score=30.42 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=11.6
Q ss_pred CCCccccccccccccc
Q 010439 452 DDGSSSSCVICWEAPV 467 (510)
Q Consensus 452 ~~~~~~~C~iC~~~~~ 467 (510)
.+.+...|-||+..+.
T Consensus 113 sd~d~ftCrvCgK~F~ 128 (267)
T KOG3576|consen 113 SDQDSFTCRVCGKKFG 128 (267)
T ss_pred CCCCeeeeehhhhhhh
Confidence 3456679999998754
No 259
>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins. Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.
Probab=32.47 E-value=16 Score=25.43 Aligned_cols=38 Identities=18% Similarity=0.603 Sum_probs=21.8
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhcc--CCcccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAK--KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~--~~~Cp~Cr~~i~ 502 (510)
..|++|.+. .+..-+ +.-|...-... +..||+|...+.
T Consensus 3 f~CP~C~~~-~~~~~L-------~~H~~~~H~~~~~~v~CPiC~~~~~ 42 (54)
T PF05605_consen 3 FTCPYCGKG-FSESSL-------VEHCEDEHRSESKNVVCPICSSRVT 42 (54)
T ss_pred cCCCCCCCc-cCHHHH-------HHHHHhHCcCCCCCccCCCchhhhh
Confidence 578888873 332222 55555544432 236999987554
No 260
>PF13248 zf-ribbon_3: zinc-ribbon domain
Probab=30.91 E-value=9 Score=22.17 Aligned_cols=21 Identities=38% Similarity=0.830 Sum_probs=11.4
Q ss_pred hHHhHHHHhccCCcccccccc
Q 010439 480 CMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 480 C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
|..|-..+....+.||.|.++
T Consensus 5 Cp~Cg~~~~~~~~fC~~CG~~ 25 (26)
T PF13248_consen 5 CPNCGAEIDPDAKFCPNCGAK 25 (26)
T ss_pred CcccCCcCCcccccChhhCCC
Confidence 555554444434467777654
No 261
>PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A. The small G protein Rab3A plays an important role in the regulation of neurotransmitter release. The crystal structure of the small G protein Rab3A complexed with the effector domain of rabphilin-3A shows that the effector domain of rabphilin-3A contacts Rab3A in two distinct areas. The first interface involves the Rab3A switch I and switch II regions, which are sensitive to the nucleotide-binding state of Rab3A. The second interface consists of a deep pocket in Rab3A that interacts with a SGAWFF structural element of rabphilin-3A. Sequence and structure analysis, and biochemical data suggest that this pocket, or Rab complementarity-determining region (RabCDR), establishes a specific interaction between each Rab protein and its effectors. It has been suggested that RabCDRs could be major determinants of effector specificity during vesicle trafficking and fusion [].; GO: 0008270 zinc ion binding, 0017137 Rab GTPase binding, 0006886 intracellular protein transport; PDB: 2CSZ_A 2ZET_C 1ZBD_B 3BC1_B 2CJS_C 2A20_A.
Probab=29.61 E-value=7.1 Score=32.33 Aligned_cols=45 Identities=27% Similarity=0.539 Sum_probs=29.5
Q ss_pred cccccccccccc-----cceEEeCCCCccchHHhHHHHhc-cCCcccccccc
Q 010439 455 SSSSCVICWEAP-----VEGACVPCGHMAGCMSCLSEIKA-KKGDCPVCRTK 500 (510)
Q Consensus 455 ~~~~C~iC~~~~-----~~~~~~pCgH~~~C~~C~~~~~~-~~~~Cp~Cr~~ 500 (510)
+...|.+|...+ ...++.-|+|.+ |..|...... ..+.|-+|+..
T Consensus 53 ~~~~C~~C~~~fg~l~~~~~~C~~C~~~V-C~~C~~~~~~~~~WlC~vC~k~ 103 (118)
T PF02318_consen 53 GERHCARCGKPFGFLFNRGRVCVDCKHRV-CKKCGVYSKKEPIWLCKVCQKQ 103 (118)
T ss_dssp CCSB-TTTS-BCSCTSTTCEEETTTTEEE-ETTSEEETSSSCCEEEHHHHHH
T ss_pred CCcchhhhCCcccccCCCCCcCCcCCccc-cCccCCcCCCCCCEEChhhHHH
Confidence 336899998752 456777899999 9999665322 22369999653
No 262
>PF07191 zinc-ribbons_6: zinc-ribbons; InterPro: IPR010807 This family consists of several short, hypothetical bacterial proteins of around 70 residues in length. Members of this family 8 highly conserved cysteine residues. The function of the family is unknown.; PDB: 2JRP_A 2JNE_A.
Probab=29.40 E-value=4.1 Score=29.97 Aligned_cols=40 Identities=25% Similarity=0.630 Sum_probs=16.5
Q ss_pred cccccccccccceEEeCCCCccchHHhHHHHhccCCcccccccccc
Q 010439 457 SSCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
..|+.|.......- +|.. |..|...... ...||-|.+++.
T Consensus 2 ~~CP~C~~~L~~~~----~~~~-C~~C~~~~~~-~a~CPdC~~~Le 41 (70)
T PF07191_consen 2 NTCPKCQQELEWQG----GHYH-CEACQKDYKK-EAFCPDCGQPLE 41 (70)
T ss_dssp -B-SSS-SBEEEET----TEEE-ETTT--EEEE-EEE-TTT-SB-E
T ss_pred CcCCCCCCccEEeC----CEEE-Ccccccccee-cccCCCcccHHH
Confidence 35777765532211 4444 7777654432 235777766554
No 263
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=29.04 E-value=13 Score=39.12 Aligned_cols=47 Identities=17% Similarity=0.175 Sum_probs=24.7
Q ss_pred cCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHhcc
Q 010439 96 RGLEPTVRLLLSCGANALVRNDDCHTALGVARIKGHINVVRAIESHI 142 (510)
Q Consensus 96 ~g~~~~v~~Ll~~gad~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~g 142 (510)
.+....+-.|++.++.++..|..|.+|+|++...|..++.+.++...
T Consensus 406 ~~~ss~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 406 NNSSSLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred cCCccceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence 33334444444555555555555555555555555555555555443
No 264
>KOG2807 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription; Replication, recombination and repair]
Probab=28.96 E-value=27 Score=33.83 Aligned_cols=41 Identities=24% Similarity=0.653 Sum_probs=29.5
Q ss_pred cccccccccccc---eEEeCCCCccchHHhHHHHhccCCcccccc
Q 010439 457 SSCVICWEAPVE---GACVPCGHMAGCMSCLSEIKAKKGDCPVCR 498 (510)
Q Consensus 457 ~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr 498 (510)
..|-.|.+.... ..+-.|.|.| |.+|-.-+-..-..||.|.
T Consensus 331 ~~Cf~C~~~~~~~~~y~C~~Ck~~F-CldCDv~iHesLh~CpgCe 374 (378)
T KOG2807|consen 331 RFCFACQGELLSSGRYRCESCKNVF-CLDCDVFIHESLHNCPGCE 374 (378)
T ss_pred cceeeeccccCCCCcEEchhcccee-eccchHHHHhhhhcCCCcC
Confidence 359999655332 3345789999 9999777665555799996
No 265
>KOG2034 consensus Vacuolar sorting protein PEP3/VPS18 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.85 E-value=27 Score=38.60 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=22.8
Q ss_pred ccccccccccc--ceEEeCCCCccchHHhHHHHh
Q 010439 457 SSCVICWEAPV--EGACVPCGHMAGCMSCLSEIK 488 (510)
Q Consensus 457 ~~C~iC~~~~~--~~~~~pCgH~~~C~~C~~~~~ 488 (510)
..|-+|.-..- .-+..||||.| .+.|+.+..
T Consensus 818 d~C~~C~~~ll~~pF~vf~CgH~F-H~~Cl~~~v 850 (911)
T KOG2034|consen 818 DSCDHCGRPLLIKPFYVFPCGHCF-HRDCLIRHV 850 (911)
T ss_pred cchHHhcchhhcCcceeeeccchH-HHHHHHHHH
Confidence 58999987632 23344999999 999976653
No 266
>COG4306 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.83 E-value=30 Score=28.40 Aligned_cols=22 Identities=27% Similarity=0.771 Sum_probs=16.2
Q ss_pred hHHhHHHHhccCCccccccccccce
Q 010439 480 CMSCLSEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 480 C~~C~~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
|..|...-.. .||+|.++|..-
T Consensus 31 cskcgeati~---qcp~csasirgd 52 (160)
T COG4306 31 CSKCGEATIT---QCPICSASIRGD 52 (160)
T ss_pred HhhhchHHHh---cCCccCCccccc
Confidence 8888655443 499999998753
No 267
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=27.56 E-value=14 Score=39.05 Aligned_cols=62 Identities=27% Similarity=0.329 Sum_probs=44.9
Q ss_pred HHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCc
Q 010439 57 ACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVRNDDCHT 121 (510)
Q Consensus 57 A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~T 121 (510)
|+.. +....+-.|+++++.++.. |..|.+|+|+++..|..++++.++....+.+..-..|.+
T Consensus 403 ~~~~-~~ss~v~~lik~~~~~~~~--d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~~~~~~~~~~ 464 (605)
T KOG3836|consen 403 AALN-NSSSLVFTLIKKGAHPNDD--DKFGFTPLHIPQISGDPRIIQLLLNCKVAISLKSVNGMI 464 (605)
T ss_pred hhhc-CCccceeeeecccCccchh--cccccccccccCCCCCHHHhhhhhhhhhhhhcccccccc
Confidence 4443 5556677777888888877 888888888888888888888888776555555444443
No 268
>KOG0801 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=26.93 E-value=27 Score=30.13 Aligned_cols=22 Identities=36% Similarity=0.640 Sum_probs=15.0
Q ss_pred Cccccccccccccc---ceEEeCCC
Q 010439 454 GSSSSCVICWEAPV---EGACVPCG 475 (510)
Q Consensus 454 ~~~~~C~iC~~~~~---~~~~~pCg 475 (510)
.+..+|+||+|... ...-+||-
T Consensus 175 ddkGECvICLEdL~~GdtIARLPCL 199 (205)
T KOG0801|consen 175 DDKGECVICLEDLEAGDTIARLPCL 199 (205)
T ss_pred ccCCcEEEEhhhccCCCceeccceE
Confidence 45579999998743 33455775
No 269
>COG1592 Rubrerythrin [Energy production and conversion]
Probab=26.83 E-value=23 Score=31.19 Aligned_cols=15 Identities=20% Similarity=0.654 Sum_probs=10.7
Q ss_pred CccccccccccceeE
Q 010439 492 GDCPVCRTKINQVIR 506 (510)
Q Consensus 492 ~~Cp~Cr~~i~~~~~ 506 (510)
..||+|.++-..|.+
T Consensus 150 ~~CPiCga~k~~F~~ 164 (166)
T COG1592 150 EVCPICGAPKEKFEK 164 (166)
T ss_pred CcCCCCCChHHHhhc
Confidence 379999887665543
No 270
>COG1379 PHP family phosphoesterase with a Zn ribbon [General function prediction only]
Probab=26.80 E-value=21 Score=34.63 Aligned_cols=46 Identities=26% Similarity=0.494 Sum_probs=28.6
Q ss_pred ccccccccccceEEeCCCCccchHHhH-----HHHhccCCccccccccccce
Q 010439 458 SCVICWEAPVEGACVPCGHMAGCMSCL-----SEIKAKKGDCPVCRTKINQV 504 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCgH~~~C~~C~-----~~~~~~~~~Cp~Cr~~i~~~ 504 (510)
-|.|-...--++.+ -=-|.-+|..|- ......+++||.|...|.+-
T Consensus 228 g~~ivaNyGLdP~L-GKY~~TAC~rC~t~y~le~A~~~~wrCpkCGg~ikKG 278 (403)
T COG1379 228 GCKIVANYGLDPRL-GKYHLTACSRCYTRYSLEEAKSLRWRCPKCGGKIKKG 278 (403)
T ss_pred CceEEEecCcCccc-cchhHHHHHHhhhccCcchhhhhcccCcccccchhhh
Confidence 46665544444433 123777899998 33444456899998877653
No 271
>cd00730 rubredoxin Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.
Probab=25.48 E-value=28 Score=23.87 Aligned_cols=14 Identities=29% Similarity=0.646 Sum_probs=9.1
Q ss_pred ccccccccccceeE
Q 010439 493 DCPVCRTKINQVIR 506 (510)
Q Consensus 493 ~Cp~Cr~~i~~~~~ 506 (510)
.||+|+++-.+|..
T Consensus 36 ~CP~C~a~K~~F~~ 49 (50)
T cd00730 36 VCPVCGAGKDDFEP 49 (50)
T ss_pred CCCCCCCcHHHcEe
Confidence 57777776665544
No 272
>PLN02436 cellulose synthase A
Probab=25.10 E-value=44 Score=38.17 Aligned_cols=45 Identities=27% Similarity=0.678 Sum_probs=30.4
Q ss_pred cccccccccc-------cceEEeCCCCccchHHhHHHHhcc-CCcccccccccc
Q 010439 457 SSCVICWEAP-------VEGACVPCGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~-------~~~~~~pCgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 502 (510)
..|.||-|.. .-+++--|+--+ |..|-+.-.+. +..||.|++...
T Consensus 37 ~iCqICGD~Vg~t~dGe~FVACn~C~fpv-Cr~Cyeyer~eg~~~Cpqckt~Y~ 89 (1094)
T PLN02436 37 QTCQICGDEIELTVDGEPFVACNECAFPV-CRPCYEYERREGNQACPQCKTRYK 89 (1094)
T ss_pred ccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 5899999873 122333455556 99998655432 447999998776
No 273
>PF09788 Tmemb_55A: Transmembrane protein 55A; InterPro: IPR019178 Members of this family catalyse the hydrolysis of the 4-position phosphate of phosphatidylinositol 4,5-bisphosphate, in the reaction: 1-phosphatidyl-myo-inositol 4,5-bisphosphate + H(2)O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate.
Probab=24.74 E-value=2.7e+02 Score=26.31 Aligned_cols=40 Identities=33% Similarity=0.677 Sum_probs=24.9
Q ss_pred ccccccccc--------ccceEEeCCCCccchHHhHHHHhccCCcccc--ccccc
Q 010439 457 SSCVICWEA--------PVEGACVPCGHMAGCMSCLSEIKAKKGDCPV--CRTKI 501 (510)
Q Consensus 457 ~~C~iC~~~--------~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~--Cr~~i 501 (510)
..|..|.|. -+-.|--||.-...|..=+.++. ||. ||..|
T Consensus 86 VkC~~CnEATPIr~aPpGKKYVRCPCNCLLICk~sS~rIa-----CPRp~CkRiI 135 (256)
T PF09788_consen 86 VKCSVCNEATPIRNAPPGKKYVRCPCNCLLICKSSSQRIA-----CPRPNCKRII 135 (256)
T ss_pred EECCCCCccccccCCCCCCeeEecCCceEEEeeccccccc-----CCCCCCcceE
Confidence 367777775 13344447777777776665554 776 76655
No 274
>PLN02189 cellulose synthase
Probab=24.72 E-value=46 Score=37.93 Aligned_cols=45 Identities=27% Similarity=0.685 Sum_probs=30.5
Q ss_pred cccccccccc----cceEEeC---CCCccchHHhHHHHhcc-CCcccccccccc
Q 010439 457 SSCVICWEAP----VEGACVP---CGHMAGCMSCLSEIKAK-KGDCPVCRTKIN 502 (510)
Q Consensus 457 ~~C~iC~~~~----~~~~~~p---CgH~~~C~~C~~~~~~~-~~~Cp~Cr~~i~ 502 (510)
..|.||-|.. -.-+|+. |+--+ |..|-+--.+. +..||.|++...
T Consensus 35 ~~C~iCgd~vg~~~~g~~fvaC~~C~fpv-Cr~Cyeyer~eg~q~CpqCkt~Y~ 87 (1040)
T PLN02189 35 QVCEICGDEIGLTVDGDLFVACNECGFPV-CRPCYEYERREGTQNCPQCKTRYK 87 (1040)
T ss_pred ccccccccccCcCCCCCEEEeeccCCCcc-ccchhhhhhhcCCccCcccCCchh
Confidence 5899999872 2224454 44445 99998654432 457999998776
No 275
>PRK01343 zinc-binding protein; Provisional
Probab=24.59 E-value=30 Score=24.39 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=7.3
Q ss_pred ccccccccccc
Q 010439 493 DCPVCRTKINQ 503 (510)
Q Consensus 493 ~Cp~Cr~~i~~ 503 (510)
.||+|++++..
T Consensus 11 ~CP~C~k~~~~ 21 (57)
T PRK01343 11 PCPECGKPSTR 21 (57)
T ss_pred cCCCCCCcCcC
Confidence 57777776653
No 276
>KOG4451 consensus Uncharacterized conserved protein (tumor-associated antigen HCA127 in humans) [Function unknown]
Probab=24.39 E-value=46 Score=30.48 Aligned_cols=23 Identities=35% Similarity=0.933 Sum_probs=18.7
Q ss_pred hHHhHHHHhccCCcccccccccc
Q 010439 480 CMSCLSEIKAKKGDCPVCRTKIN 502 (510)
Q Consensus 480 C~~C~~~~~~~~~~Cp~Cr~~i~ 502 (510)
|..|-..+-+.-+.||+|++.-.
T Consensus 252 ClsChqqIHRNAPiCPlCKaKsR 274 (286)
T KOG4451|consen 252 CLSCHQQIHRNAPICPLCKAKSR 274 (286)
T ss_pred HHHHHHHHhcCCCCCcchhhccc
Confidence 99999988876678999987543
No 277
>PF14311 DUF4379: Domain of unknown function (DUF4379)
Probab=24.06 E-value=44 Score=23.25 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=12.7
Q ss_pred CCCCccchHHhHHHHhccCCccccc
Q 010439 473 PCGHMAGCMSCLSEIKAKKGDCPVC 497 (510)
Q Consensus 473 pCgH~~~C~~C~~~~~~~~~~Cp~C 497 (510)
-|||.+-..-.... .....||.|
T Consensus 33 ~Cgh~w~~~v~~R~--~~~~~CP~C 55 (55)
T PF14311_consen 33 KCGHEWKASVNDRT--RRGKGCPYC 55 (55)
T ss_pred CCCCeeEccHhhhc--cCCCCCCCC
Confidence 57887744333222 223479988
No 278
>PF10217 DUF2039: Uncharacterized conserved protein (DUF2039); InterPro: IPR019351 This entry is a region of approximately 100 residues containing three pairs of cysteine residues. The region is conserved from plants to humans but its function is unknown.
Probab=23.48 E-value=36 Score=26.69 Aligned_cols=34 Identities=32% Similarity=0.735 Sum_probs=22.9
Q ss_pred ccccccccccceEEeCCCCccchHHhHHHHhccCCcccccccc
Q 010439 458 SCVICWEAPVEGACVPCGHMAGCMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
.|..|.+.-+.-. =|.+ |..|+..+.. |+.|..+
T Consensus 57 kC~~C~qktVk~A----Yh~i-C~~Ca~~~~v----CaKC~k~ 90 (92)
T PF10217_consen 57 KCNKCQQKTVKHA----YHVI-CDPCAKELKV----CAKCGKP 90 (92)
T ss_pred cccccccchHHHH----HHHH-HHHHHHhhcc----CcccCCC
Confidence 4555554433221 2777 9999999876 9999764
No 279
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=23.32 E-value=66 Score=29.70 Aligned_cols=40 Identities=28% Similarity=0.227 Sum_probs=30.4
Q ss_pred HHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCC
Q 010439 70 LIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGAN 111 (510)
Q Consensus 70 Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad 111 (510)
|++.|+--|.. |....|+=-+|.+.++.+..+.|++.|+.
T Consensus 1 lle~ga~wn~i--d~~n~t~gd~a~ern~~rly~~lv~~gv~ 40 (271)
T KOG1709|consen 1 LLEYGAGWNFI--DYENKTVGDLALERNQSRLYRRLVEAGVP 40 (271)
T ss_pred CcccCCCcccc--ChhhCCchHHHHHccHHHHHHHHHHcCCc
Confidence 46777777777 66777888888888888888888887754
No 280
>COG2093 DNA-directed RNA polymerase, subunit E'' [Transcription]
Probab=22.77 E-value=28 Score=24.93 Aligned_cols=22 Identities=27% Similarity=0.717 Sum_probs=15.4
Q ss_pred chHHhHHHHhccCCcccccccc
Q 010439 479 GCMSCLSEIKAKKGDCPVCRTK 500 (510)
Q Consensus 479 ~C~~C~~~~~~~~~~Cp~Cr~~ 500 (510)
+|..|-.-+......||+|...
T Consensus 6 AC~~Ck~l~~~d~e~CP~Cgs~ 27 (64)
T COG2093 6 ACKNCKRLTPEDTEICPVCGST 27 (64)
T ss_pred HHhhccccCCCCCccCCCCCCc
Confidence 3888866555545569999876
No 281
>smart00290 ZnF_UBP Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger.
Probab=22.20 E-value=56 Score=21.94 Aligned_cols=21 Identities=29% Similarity=0.885 Sum_probs=15.7
Q ss_pred cccccccccceEEeCCCCccch
Q 010439 459 CVICWEAPVEGACVPCGHMAGC 480 (510)
Q Consensus 459 C~iC~~~~~~~~~~pCgH~~~C 480 (510)
|..|.......+.+.|+|.+ |
T Consensus 2 C~~C~~~~~l~~CL~C~~~~-c 22 (50)
T smart00290 2 CSVCGTIENLWLCLTCGQVG-C 22 (50)
T ss_pred cccCCCcCCeEEecCCCCcc-c
Confidence 77777666566777899888 6
No 282
>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length. This family contains a number of conserved cysteine residues and its function is unknown.
Probab=21.96 E-value=66 Score=22.55 Aligned_cols=22 Identities=27% Similarity=0.835 Sum_probs=16.9
Q ss_pred hHHhHHHHhccCCccccccccccc
Q 010439 480 CMSCLSEIKAKKGDCPVCRTKINQ 503 (510)
Q Consensus 480 C~~C~~~~~~~~~~Cp~Cr~~i~~ 503 (510)
|..|++.+.. ..||-|...+..
T Consensus 32 C~~C~e~~l~--~~CPNCgGelv~ 53 (57)
T PF06906_consen 32 CADCAETMLN--GVCPNCGGELVR 53 (57)
T ss_pred cHHHHHHHhc--CcCcCCCCcccc
Confidence 9999998853 469999876543
No 283
>KOG1812 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=21.45 E-value=50 Score=33.61 Aligned_cols=40 Identities=28% Similarity=0.654 Sum_probs=26.3
Q ss_pred ccccccccc-----ccceEEeCCCCccchHHhHHHHhccCCccccc
Q 010439 457 SSCVICWEA-----PVEGACVPCGHMAGCMSCLSEIKAKKGDCPVC 497 (510)
Q Consensus 457 ~~C~iC~~~-----~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~C 497 (510)
..|+.|.-. -+..+.-.|||.| |+.|...|...+..|.-|
T Consensus 307 r~CpkC~~~ie~~~GCnhm~CrC~~~f-cy~C~~~~~~~~~~~~~~ 351 (384)
T KOG1812|consen 307 RQCPKCKFMIELSEGCNHMTCRCGHQF-CYMCGGDWKTHNGECYEC 351 (384)
T ss_pred CcCcccceeeeecCCcceEEeeccccc-hhhcCcchhhCCccccCc
Confidence 457776533 3444444599999 999998887665545443
No 284
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=21.38 E-value=71 Score=33.12 Aligned_cols=70 Identities=9% Similarity=-0.122 Sum_probs=49.5
Q ss_pred HHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHH
Q 010439 56 VACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSC-GANALVRNDDCHTALGVAR 127 (510)
Q Consensus 56 ~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gad~~~~d~~g~TpL~~A~ 127 (510)
+|+..++-..+...+++....+|.. ...++.+|+++...+|.+.+..+..+ ..+-++.+..|+++..+-.
T Consensus 149 ~a~~lg~vs~l~~v~lk~k~~p~~l--~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~~~e 219 (558)
T KOG4335|consen 149 NASCLGLVSPLLEVQLKPKHQPNYL--LGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQIIDE 219 (558)
T ss_pred cccceeccCHHHHHhhccccCCchh--hccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcchhhhHH
Confidence 4555555556777777777788887 77899999999998998888776554 2334455667777765543
No 285
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.01 E-value=2.1 Score=44.81 Aligned_cols=99 Identities=10% Similarity=-0.047 Sum_probs=63.4
Q ss_pred HHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCccccCCCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccC
Q 010439 36 LRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANINAYRPGGRGGTPLHHAAKRGLEPTVRLLLSCGANALVR 115 (510)
Q Consensus 36 Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~n~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~ 115 (510)
|+....+.+....+..++++..... ...+++..++.++..-... +..|.|+||.+...++. .+.+ ...
T Consensus 122 ll~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~l~~~~~~~~~--~~~g~t~L~~tl~~~~~--~~~i-------~~l 189 (503)
T KOG0513|consen 122 LLEKFDDPNFIKGDLNLALRILVSG-DKYSGAEVLLTKYEIADAR--EVLGNTKLHLTLTKENL--LVVI-------PCL 189 (503)
T ss_pred cccccccccccccccccceeeeecC-ccccceeecccccccchhh--hhcCCceeeeeccCCCc--ceEE-------Eee
Confidence 3334444443345678889988875 7788888888866666655 77899999999998877 2222 233
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcccccc
Q 010439 116 NDDCHTALGVARIKGHINVVRAIESHICYFC 146 (510)
Q Consensus 116 d~~g~TpL~~A~~~g~~~~v~~Ll~~ga~~~ 146 (510)
|..+.+|+++.+..+..+.+-.++.+++...
T Consensus 190 dl~~~~P~lf~~~~~~~~~~v~~~~~~~~~~ 220 (503)
T KOG0513|consen 190 DLKSLTPNLFSIYDALGTKIVPLLDFKAIDI 220 (503)
T ss_pred ccCcCCceeeeeeccccccchhhhhhhhhhh
Confidence 4455788888776655443333444444444
No 286
>KOG1709 consensus Guanidinoacetate methyltransferase and related proteins [Amino acid transport and metabolism]
Probab=20.55 E-value=78 Score=29.25 Aligned_cols=41 Identities=27% Similarity=0.259 Sum_probs=35.2
Q ss_pred HHHcCCCCcccCCCCChHHHHHHHhCCcHHHHHHHHHcCCCc
Q 010439 36 LRSQGASLEWMDKEGKTPLIVACMDSGLINVAKTLIELGANI 77 (510)
Q Consensus 36 Ll~~g~~~~~~d~~g~TpL~~A~~~~~~~~~v~~Ll~~ga~~ 77 (510)
||+.|+.-|..|....|+=-+|-++ |+.+.-+.|++.|+.-
T Consensus 1 lle~ga~wn~id~~n~t~gd~a~er-n~~rly~~lv~~gv~S 41 (271)
T KOG1709|consen 1 LLEYGAGWNFIDYENKTVGDLALER-NQSRLYRRLVEAGVPS 41 (271)
T ss_pred CcccCCCccccChhhCCchHHHHHc-cHHHHHHHHHHcCCch
Confidence 4678888888999999999999987 8999999999998654
No 287
>PHA02610 uvsY.-2 hypothetical protein; Provisional
Probab=20.43 E-value=50 Score=22.62 Aligned_cols=15 Identities=27% Similarity=0.711 Sum_probs=11.7
Q ss_pred ccccccccccceeEe
Q 010439 493 DCPVCRTKINQVIRL 507 (510)
Q Consensus 493 ~Cp~Cr~~i~~~~~i 507 (510)
.|++|++||.+.+.+
T Consensus 3 iCvvCK~Pi~~al~v 17 (53)
T PHA02610 3 ICVVCKQPIEKALVV 17 (53)
T ss_pred eeeeeCCchhhceEE
Confidence 599999999876543
No 288
>COG4416 Com Mu-like prophage protein Com [General function prediction only]
Probab=20.42 E-value=60 Score=22.41 Aligned_cols=21 Identities=24% Similarity=0.786 Sum_probs=14.9
Q ss_pred chHHhHHHHhcc------CCccccccc
Q 010439 479 GCMSCLSEIKAK------KGDCPVCRT 499 (510)
Q Consensus 479 ~C~~C~~~~~~~------~~~Cp~Cr~ 499 (510)
-|..|-+.+... +.+||.|..
T Consensus 6 RC~~CnKlLa~a~~~~yle~KCPrCK~ 32 (60)
T COG4416 6 RCAKCNKLLAEAEGQAYLEKKCPRCKE 32 (60)
T ss_pred ehHHHhHHHHhcccceeeeecCCccce
Confidence 388888777653 347999954
No 289
>COG4647 AcxC Acetone carboxylase, gamma subunit [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.16 E-value=58 Score=26.92 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=18.7
Q ss_pred ccccccccccceEEeCCCCccchHH
Q 010439 458 SCVICWEAPVEGACVPCGHMAGCMS 482 (510)
Q Consensus 458 ~C~iC~~~~~~~~~~pCgH~~~C~~ 482 (510)
.=-||.+....++-..|||.| |..
T Consensus 59 hlfi~qs~~~rv~rcecghsf-~d~ 82 (165)
T COG4647 59 HLFICQSAQKRVIRCECGHSF-GDY 82 (165)
T ss_pred cEEEEecccccEEEEeccccc-cCh
Confidence 456888888778888999999 543
No 290
>KOG4846 consensus Nuclear receptor [Signal transduction mechanisms]
Probab=20.11 E-value=5.3e+02 Score=26.27 Aligned_cols=14 Identities=21% Similarity=0.484 Sum_probs=10.3
Q ss_pred Cccccccccccccc
Q 010439 454 GSSSSCVICWEAPV 467 (510)
Q Consensus 454 ~~~~~C~iC~~~~~ 467 (510)
.....|.||-|...
T Consensus 130 ~~~~lCkVCgDkAS 143 (538)
T KOG4846|consen 130 KAISLCKVCGDKAS 143 (538)
T ss_pred ceeEeehhhccccc
Confidence 34468999998754
No 291
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=20.01 E-value=62 Score=35.24 Aligned_cols=38 Identities=34% Similarity=0.717 Sum_probs=26.6
Q ss_pred cccccccc--ccceEEeCCCCccchHHhHHHHhccCCcccc
Q 010439 458 SCVICWEA--PVEGACVPCGHMAGCMSCLSEIKAKKGDCPV 496 (510)
Q Consensus 458 ~C~iC~~~--~~~~~~~pCgH~~~C~~C~~~~~~~~~~Cp~ 496 (510)
.|.||.-+ ...-++.-|+|+. ...|...|.+....||-
T Consensus 1030 ~C~~C~l~V~gss~~Cg~C~Hv~-H~sc~~eWf~~gd~Cps 1069 (1081)
T KOG0309|consen 1030 QCAICHLAVRGSSNFCGTCGHVG-HTSCMMEWFRTGDVCPS 1069 (1081)
T ss_pred eeeeEeeEeeccchhhccccccc-cHHHHHHHHhcCCcCCC
Confidence 35565433 2233456899999 99999999987666774
Done!